To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene LOC55908TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
20 supporting clones for gene LOC55908 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AF271350   .a 1 to 1223 1 to 1223 exact tiling clone, AAA   1223/1311
(93 %)
3 diff
(99.8 %id)
BP316755 pericardium .a 351 to 937 1 to 587       587/587
(100 %)
5 diff
(99.2 %id)
NM_018687.6   .a 352 to 1222 1 to 871   RefSeq, AAA   871/871
(100 %)
0 diff
(100 %id)
AY358356   .a 368 to 1222 1 to 855   AAA   855/855
(100 %)
1 diff
(99.9 %id)
AV654765 corresponding non cancerous liver tissue .a 368 to 765 1 to 398     Submitted on the opposite strand 398/398
(100 %)
1 diff
(99.8 %id)
AV656119.
matches multiple genes
corresponding non cancerous liver tissue .a 368 to 765 1 to 398     Submitted on the opposite strand, also hits gene FAM35A 398/398
(100 %)
1 diff
(99.8 %id)
AV655891 corresponding non cancerous liver tissue .a 372 to 1046 1 to 675     Submitted on the opposite strand 675/676
(99 %)
7 diff
(99.0 %id)
AV656411 corresponding non cancerous liver tissue .a 376 to 789 1 to 414     Submitted on the opposite strand 414/414
(100 %)
2 diff
(99.6 %id)
TI_57161972   .a 410 to 1145 32 to 771       740/771
(95 %)
15 diff
(98.1 %id)
BI832620 pooled pancreas and spleen .a 412 to 1145 1 to 738       738/738
(100 %)
14 diff
(98.2 %id)
AV718605 corresponding non cancerous liver tissue .a 628 to 1212 585 to 1     Submitted on the opposite strand 585/585
(100 %)
0 diff
(100 %id)
AA923549 2 pooled tumors (clear cell type), Kidney .b 1 to 457 462 to 8 G14V R21S L22S T23R L24* tiling clone,   455/462
(98 %)
2 diff
(99.6 %id)
AI950351 2 pooled tumors (clear cell type), Kidney .b 26 to 457 439 to 8   tiling clone,   432/439
(98 %)
0 diff
(100 %id)
BQ002776 Chondrosarcoma, Left Pelvis .c 1 to 654 672 to 18 R80X E81R F82I E83* tiling clone,   655/672
(97 %)
1 diff
(99.9 %id)
AV719284 corresponding non cancerous liver tissue .c 162 to 633 472 to 1   tiling clone, Submitted on the opposite strand 472/472
(100 %)
1 diff
(99.8 %id)
AV697855 hepatocellular carcinoma .c 264 to 653 1 to 384   AAA   384/384
(100 %)
3 diff
(99.3 %id)
BC113823 PCR rescued clones .d 1 to 504 1 to 504 exact tiling clone,   504/504
(100 %)
0 diff
(100 %id)
DB321291 Liver Gene LOC55908, variant not shown         This clone was ignored    
DA639894 Liver Gene LOC55908, variant not shown       capped This clone was ignored    
BF334792 colon Gene LOC55908, variant not shown         Suspected internal deletion, this clone was ignored    
BF511595   Gene LOC55908, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C