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Gene FAM178BTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
36 supporting clones for gene FAM178B back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
TI_57174090   .a 1 to 670 24 to 689   tiling clone,   666/689
(96 %)
11 diff
(98.5 %id)
BQ229422 melanotic melanoma, skin .a 2 to 550 22 to 577   tiling clone,   556/979
(56 %)
19 diff
(98.1 %id)
BI826484 brain, medulla .a 9 to 670 1 to 659   tiling clone,   659/659
(100 %)
5 diff
(99.3 %id)
NM_001122646.2   .a 9 to 2699 1 to 2691   RefSeq,   2691/2691
(100 %)
6 diff
(99.8 %id)
BC039488 Skin, melanotic melanoma. .a 742 to 2689 1 to 1948   tiling clone, available from MGC, AAA   1948/1948
(100 %)
2 diff
(99.9 %id)
BM471664 melanotic melanoma, skin .a 744 to 1441 33 to 732   available from MGC,   700/1069
(65 %)
15 diff
(98.6 %id)
H80588 liver and spleen .a 1946 to 2243 1 to 301       301/301
(100 %)
10 diff
(96.7 %id)
BF746694 breast .a 2217 to 2483 1 to 265       265/291
(91 %)
12 diff
(95.9 %id)
AI148629 placenta .a 2227 to 2689 463 to 1       463/463
(100 %)
0 diff
(100 %id)
AW088716 ovary, tumor, 5 pooled (see description) .a 2265 to 2327 63 to 1       63/63
(100 %)
0 diff
(100 %id)
H67099 liver and spleen .a 2280 to 2691 422 to 7       416/422
(98 %)
0 diff
(100 %id)
AI087961 pooled .a 2378 to 2693 318 to 3   tiling clone,   316/318
(99 %)
0 diff
(100 %id)
R92968 liver and spleen .a 2429 to 2691 263 to 1       263/263
(100 %)
1 diff
(99.7 %id)
AK122705 subthalamic nucleus .b 1 to 1562 2 to 1563 exact tiling clone, available from FLJ,   1563/1563
(100 %)
1 diff
(100.0 %id)
DA357118 subthalamic nucleus .b 1 to 570 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DB310503 subthalamic nucleus .b 1075 to 1562 494 to 1       494/500
(98 %)
7 diff
(98.6 %id)
AK308698 alzheimer cortex .c 1 to 1457 2 to 1458   tiling clone,   1458/1458
(100 %)
3 diff
(99.8 %id)
DA140584 alzheimer cortex .c 1 to 543 2 to 544   capped   543/543
(100 %)
2 diff
(99.7 %id)
BP281540 bone marrow .d 1 to 585 6 to 588 A46V tiling clone,   583/588
(99 %)
7 diff
(98.9 %id)
NM_001172667.1   .e 1 to 892 1 to 892 exact RefSeq,   892/892
(100 %)
6 diff
(99.4 %id)
N76984 liver and spleen .e 18 to 373 1 to 357   tiling clone,   357/357
(100 %)
16 diff
(95.6 %id)
BX103404 liver and spleen .e 23 to 706 1 to 684 exact tiling clone,   684/684
(100 %)
0 diff
(100 %id)
BF240113 bone marrow, from chronic myelogenous leukemia .e 32 to 631 1 to 600 P36T C37L Q38P E39G Q40A ...     600/851
(70 %)
29 diff
(96.6 %id)
AF151068 umbilical cord blood .e 44 to 886 1 to 844 P22H A44* tiling clone, AAA   843/844
(99 %)
16 diff
(98.2 %id)
N76801 liver and spleen .e 44 to 513 1 to 473 P22H A44X S45V A46P E47S ... fully sequenced,   473/473
(100 %)
9 diff
(98.1 %id)
N80976 liver and spleen .e 52 to 456 1 to 409       409/422
(96 %)
15 diff
(96.5 %id)
N55496 liver and spleen .e 469 to 879 424 to 5       420/424
(99 %)
0 diff
(100 %id)
N55428 liver and spleen .e 483 to 887 407 to 1   tiling clone, fully sequenced,   407/407
(100 %)
4 diff
(99.1 %id)
N68280 liver and spleen .e 642 to 886 252 to 7       246/252
(97 %)
0 diff
(100 %id)
TI_59382839   .f 1 to 766 46 to 810 exact tiling clone,   765/842
(90 %)
10 diff
(98.9 %id)
BM007607 Spleen .f 2 to 766 1 to 764 exact available from MGC,   764/841
(90 %)
10 diff
(98.9 %id)
BC051379 Spleen .f 3 to 1002 1 to 1000 exact tiling clone, available from MGC, AAA   1000/1000
(100 %)
3 diff
(99.7 %id)
NM_016490.4   .f 3 to 1012 1 to 1010 exact RefSeq,   1010/1010
(100 %)
6 diff
(99.5 %id)
TI_57168292   .f 38 to 695 25 to 681 exact     657/681
(96 %)
7 diff
(99.0 %id)
BC038583 Pancreas, Spleen, adult pooled .f 42 to 1002 1 to 961 exact tiling clone, available from MGC, AAA   961/961
(100 %)
0 diff
(100 %id)
BI834707 pooled pancreas and spleen .f 42 to 695 1 to 653 exact available from MGC,   653/653
(100 %)
2 diff
(99.7 %id)
DA593634 lung .g 1 to 573 2 to 577 H94P S95Q L96P G97E A98C ... tiling clone, capped   576/576
(100 %)
7 diff
(98.8 %id)
AA448091   .h-u 1 to 314 1 to 312 D34T C35A K36R A37Q S39A ... tiling clone, fully sequenced,   312/312
(100 %)
2 diff
(99.4 %id)
AA447592   .h-u 284 to 580 296 to 1   tiling clone, fully sequenced,   296/296
(100 %)
1 diff
(99.7 %id)
AJ710728 heart Gene FAM178B, variant not shown       AAA Suspected internal deletion, this clone was ignored    
BU628905 cell lines, Chondrosarcoma Gene FAM178B, variant not shown       AAA Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI