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Gene FLJ44606TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
81 supporting clones for gene FLJ44606 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BQ286389 Pancreas, Purified pancreatic islet .a 1 to 534 6 to 539   tiling clone,   539/539
(100 %)
1 diff
(99.9 %id)
NM_001164479.1   .a 30 to 5667 43 to 5680 exact RefSeq,   5680/5680
(100 %)
0 diff
(100 %id)
CK825821 Pancreas, Purified pancreatic islet .a 43 to 626 1 to 584 exact   Submitted on the opposite strand 584/584
(100 %)
0 diff
(100 %id)
BQ269742 Pancreas, Purified pancreatic islet .a 92 to 698 608 to 2 exact     607/608
(99 %)
0 diff
(100 %id)
FN049568 breast carcinoma .a 110 to 171 62 to 1     Submitted on the opposite strand 62/70
(88 %)
0 diff
(100 %id)
FN117525 breast carcinoma .a 161 to 231 70 to 1     Submitted on the opposite strand 70/82
(85 %)
1 diff
(98.8 %id)
FN086039 breast carcinoma .a 165 to 254 1 to 87       87/89
(97 %)
4 diff
(95.6 %id)
AA844061 parathyroid gland, parathyroid tumor .a 282 to 704 423 to 1   tiling clone,   423/423
(100 %)
0 diff
(100 %id)
AI806002 pooled .a 315 to 698 390 to 7       384/390
(98 %)
0 diff
(100 %id)
D25963   .a 322 to 694 1 to 379     Submitted on the opposite strand 379/390
(97 %)
14 diff
(96.5 %id)
AW297702   .a 355 to 697 360 to 18   AAA   343/343
(100 %)
0 diff
(100 %id)
FN127510 breast carcinoma .a 639 to 694 1 to 56       56/60
(93 %)
1 diff
(98.4 %id)
AA353425   .b 15 to 336 1 to 324   tiling clone,   324/324
(100 %)
3 diff
(99.1 %id)
NM_001164478.1   .b 30 to 953 43 to 966 exact RefSeq,   966/966
(100 %)
0 diff
(100 %id)
AI028435 parathyroid gland, parathyroid tumor .b 300 to 645 363 to 18   tiling clone, AAA   346/346
(100 %)
1 diff
(99.8 %id)
AI208338   .b 371 to 641 298 to 28   AAA   271/271
(100 %)
15 diff
(94.5 %id)
AA583280 germ cell tumor .b 678 to 949 272 to 1   tiling clone,   272/272
(100 %)
0 diff
(100 %id)
FN047710 breast carcinoma .b 696 to 787 94 to 1     Submitted on the opposite strand 94/94
(100 %)
2 diff
(97.9 %id)
FN057342 breast carcinoma .b 696 to 785 93 to 5     Submitted on the opposite strand 89/93
(95 %)
0 diff
(100 %id)
FN125876 breast carcinoma .b 864 to 944 1 to 83       83/84
(98 %)
3 diff
(96.5 %id)
FN119025 breast carcinoma .b 875 to 948 75 to 3     Submitted on the opposite strand 73/75
(97 %)
0 diff
(100 %id)
BG942515 blood .c 1 to 334 367 to 34 exact tiling clone, AAA   334/334
(100 %)
1 diff
(99.8 %id)
BQ428965 testis .d 1 to 501 1 to 500 exact tiling clone,   760/760
(100 %)
25 diff
(96.8 %id)
FN049364 breast carcinoma .d 589 to 714 128 to 1   tiling clone, Submitted on the opposite strand 128/128
(100 %)
2 diff
(98.5 %id)
FN080285 breast carcinoma .d 590 to 674 1 to 83   tiling clone,   83/84
(98 %)
5 diff
(94.1 %id)
FN095088 breast carcinoma .d 590 to 674 1 to 83       83/84
(98 %)
3 diff
(96.5 %id)
AK126569 cerebellum .e 1 to 2976 2 to 2977 R28G tiling clone, available from FLJ,   2977/2977
(100 %)
2 diff
(100.0 %id)
DA058278 cerebellum .e 1 to 583 2 to 584   capped   583/583
(100 %)
1 diff
(99.9 %id)
AV761624 bone marrow .e 1 to 411 1 to 409       409/414
(98 %)
13 diff
(96.9 %id)
W38954 parathyroid gland, parathyroid tumor .e 6 to 382 1 to 378   fully sequenced,   378/378
(100 %)
3 diff
(99.3 %id)
BX100703 parathyroid gland, parathyroid tumor .e 8 to 721 1 to 714 C103X     714/714
(100 %)
0 diff
(100 %id)
N93197 parathyroid gland, parathyroid tumor .e 365 to 821 457 to 3   tiling clone, fully sequenced,   455/457
(99 %)
2 diff
(99.6 %id)
DB296776 cerebellum .e 2434 to 2976 543 to 1       543/543
(100 %)
3 diff
(99.5 %id)
AI567691 adenocarcinoma, Pancreas .e 2491 to 2983 493 to 2       492/493
(99 %)
0 diff
(100 %id)
AI632606 pooled germ cell tumors .e 2493 to 2976 484 to 1       484/484
(100 %)
1 diff
(99.8 %id)
BE551203 carcinoid, lung .e 2569 to 3115 547 to 1       547/547
(100 %)
1 diff
(99.9 %id)
AW316929 brain, three pooled meningiomas .e 2574 to 2981 408 to 1       408/408
(100 %)
1 diff
(99.8 %id)
BF511278   .e 2596 to 2993 398 to 1       398/398
(100 %)
37 diff
(90.8 %id)
AI693892 carcinoid, lung .e 2604 to 3116 534 to 22   AAA Possibly primed on the genome, locally A rich (15/18 A in genome downstream of last aligned base) 513/513
(100 %)
4 diff
(99.3 %id)
BX104856 adenocarcinoma, Pancreas .e 2621 to 2976 370 to 15   AAA Submitted on the opposite strand 356/356
(100 %)
1 diff
(99.8 %id)
AI167856 parathyroid gland, parathyroid tumor .e 2740 to 3123 385 to 2       384/385
(99 %)
0 diff
(100 %id)
AI167854 parathyroid gland, parathyroid tumor .e 2744 to 3123 381 to 2       380/381
(99 %)
0 diff
(100 %id)
AI863815 2 pooled tumors (clear cell type), Kidney .e 2754 to 2982 229 to 1       229/229
(100 %)
1 diff
(99.6 %id)
AI365536 B-cell, chronic lymphotic leukemia .e 2842 to 3113 272 to 1       272/272
(100 %)
1 diff
(99.7 %id)
AW628552 pooled .e 2846 to 3118 275 to 3   tiling clone,   273/275
(99 %)
0 diff
(100 %id)
AA593988 colon, colon tumor .e 2980 to 3538 560 to 1       560/560
(100 %)
3 diff
(99.5 %id)
BX094840 pooled .e 2983 to 3457 1 to 478       478/478
(100 %)
3 diff
(99.4 %id)
BE674694 B-cell, chronic lymphotic leukemia .e 3027 to 3546 520 to 1       520/520
(100 %)
0 diff
(100 %id)
AI828014 pooled .e 3088 to 3548 461 to 1   tiling clone,   461/461
(100 %)
0 diff
(100 %id)
BF808041 colon_ins .e 3525 to 3886 386 to 26   tiling clone, Submitted on the opposite strand 361/386
(93 %)
0 diff
(100 %id)
R14763 whole brain .e 4234 to 4515 1 to 283   tiling clone, Possibly primed on the genome, locally A rich (15/18 A in genome downstream of last aligned base) 283/496
(57 %)
5 diff
(99.0 %id)
BX497320 Liver .e 4602 to 5277 1 to 676   tiling clone,   676/676
(100 %)
0 diff
(100 %id)
BG150567 pooled germ cell tumors .e 5270 to 5768 502 to 4   tiling clone,   499/502
(99 %)
0 diff
(100 %id)
AI953062 pooled germ cell tumors .e 5286 to 5768 486 to 4       483/486
(99 %)
0 diff
(100 %id)
BX116743 whole brain .e 5292 to 5776 500 to 15   AAA Possibly primed on the genome, locally A rich (15/18 A in genome downstream of last aligned base) 486/486
(100 %)
1 diff
(99.8 %id)
AA827900 germinal center B cell .e 5313 to 5773 467 to 7   tiling clone,   461/467
(98 %)
0 diff
(100 %id)
AW193808 pooled germ cell tumors .e 5313 to 5768 460 to 4       457/460
(99 %)
0 diff
(100 %id)
AI627420 pooled germ cell tumors .e 5319 to 5768 453 to 4       450/453
(99 %)
0 diff
(100 %id)
AA907919 pooled .e 5323 to 5770 448 to 1       448/448
(100 %)
2 diff
(99.6 %id)
R42533 whole brain .e 5359 to 5776 438 to 13   tiling clone, AAA Possibly primed on the genome, locally A rich (15/18 A in genome downstream of last aligned base) 426/427
(99 %)
23 diff
(94.7 %id)
DA507232 brain .f -11 to 540 2 to 554 exact tiling clone, capped   553/553
(100 %)
2 diff
(99.7 %id)
BM874676   .f 421 to 935 1 to 515   tiling clone,   515/515
(100 %)
2 diff
(99.7 %id)
EL950044 eyeball .f 592 to 1220 39 to 667   tiling clone,   629/667
(94 %)
6 diff
(99.2 %id)
BF832211 head_neck .f 759 to 894 136 to 1     Submitted on the opposite strand 136/136
(100 %)
0 diff
(100 %id)
AI027976 parathyroid gland, parathyroid tumor .f 884 to 1310 437 to 11   tiling clone, AAA   427/427
(100 %)
2 diff
(99.6 %id)
AV757135 bone marrow .g 30 to 630 114 to 708 P4S V54G F55L K71X E73D ... tiling clone,   637/650
(98 %)
18 diff
(97.3 %id)
FN140691 breast carcinoma .g 30 to 65 49 to 84       84/84
(100 %)
7 diff
(91.7 %id)
FN156868 breast carcinoma .g 30 to 57 46 to 73       73/73
(100 %)
3 diff
(95.9 %id)
N92035 liver and spleen .g 188 to 621 1 to 440 E40X N41K S42L V43C W44L ... tiling clone,   440/440
(100 %)
7 diff
(98.5 %id)
AI452788 pooled .g 592 to 1063 477 to 6       472/477
(98 %)
0 diff
(100 %id)
AI418538 pooled .g 593 to 1059 477 to 11   tiling clone, AAA   467/467
(100 %)
0 diff
(100 %id)
AW070420 pooled .g 604 to 1061 460 to 3       458/460
(99 %)
0 diff
(100 %id)
BF510269   .g 630 to 1062 450 to 18   AAA   433/433
(100 %)
2 diff
(99.6 %id)
N68821 liver and spleen .g 657 to 1063 409 to 4       406/409
(99 %)
0 diff
(100 %id)
AA694458 parathyroid gland, parathyroid tumor .g 671 to 1059 387 to 1       387/387
(100 %)
5 diff
(98.8 %id)
AI281306 adenocarcinoma, colon .g 690 to 1059 393 to 24   AAA   370/370
(100 %)
23 diff
(93.8 %id)
AI873055 pooled .g 692 to 1063 376 to 3   tiling clone,   374/376
(99 %)
0 diff
(100 %id)
AA768722 germinal center B cell .g 751 to 1062 326 to 15   AAA   312/312
(100 %)
0 diff
(100 %id)
DN997450 breast cancer, Mammary gland (cancer tissue) .h 1 to 684 9 to 692 exact tiling clone,   684/692
(98 %)
6 diff
(99.2 %id)
BQ639389 eye, retina .i 1 to 624 8 to 632 exact tiling clone,   625/632
(98 %)
8 diff
(98.8 %id)
CN290315 embryonic stem cells, DMSO-treated H9 cellline .j-u 1 to 170 1 to 170   tiling clone,   170/170
(100 %)
1 diff
(99.5 %id)
DA795361 brain .j-u 59 to 602 2 to 545 exact tiling clone, capped   544/544
(100 %)
2 diff
(99.7 %id)
DB066250 testis .k-u 1 to 535 2 to 535 exact tiling clone, capped   534/534
(100 %)
1 diff
(99.9 %id)
DN998710 bone marrow .l 1 to 478 1 to 478 exact tiling clone, AAA   478/478
(100 %)
1 diff
(99.8 %id)
AV718182 hypothalamus Gene FLJ44606, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j-u, .k-u, .l Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C