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Gene TAGLN2_TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
394 representative clones for gene TAGLN2_ back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA590830 lung .a 1 to 556 2 to 558   tiling clone, capped   557/557
(100 %)
2 diff
(99.7 %id)
DB042295 testis .a 15 to 563 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
AK292249 testis .a 37 to 1880 1 to 1844 K249E     1844/1846
(99 %)
2 diff
(99.9 %id)
CD704684 normal nasopharynx .a 39 to 353 18 to 331       314/331
(94 %)
6 diff
(98.2 %id)
AK225566 lung .a 40 to 1876 1 to 1837 R441W     1837/1837
(100 %)
3 diff
(99.9 %id)
AK225582 lung .a 40 to 1878 1 to 1839 K509R tiling clone, AAA   1839/1839
(100 %)
2 diff
(99.9 %id)
BP291965 lung .a 40 to 614 1 to 575       575/575
(100 %)
3 diff
(99.5 %id)
BP293051 lung .a 40 to 614 1 to 574       574/583
(98 %)
8 diff
(98.7 %id)
BP358787 mammary gland .a 40 to 610 1 to 573       573/582
(98 %)
6 diff
(99.0 %id)
DB039787 testis .a 41 to 608 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DB256945 uterus .a 41 to 584 2 to 547   capped   546/546
(100 %)
2 diff
(99.7 %id)
DB047069 testis .a 42 to 595 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
DB033428 testis .a 44 to 604 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DB636322 testis .a 49 to 768 1 to 720       720/720
(100 %)
11 diff
(98.5 %id)
DB022801 testis .a 52 to 369 2 to 319   capped   318/318
(100 %)
0 diff
(100 %id)
DB030302 testis .a 52 to 646 2 to 596   capped   595/595
(100 %)
0 diff
(100 %id)
AF094758 nasopharyngeal epithelium .a 53 to 1876 1 to 1823 Q440H R441G D442T R443G D444M ... AAA   1823/1823
(100 %)
3 diff
(99.9 %id)
D31015   .a 53 to 350 1 to 296       296/300
(98 %)
4 diff
(98.7 %id)
DB025811 testis .a 55 to 630 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
BM309931 insulinoma, Pancreas .a 59 to 617 20 to 577       558/577
(96 %)
7 diff
(98.8 %id)
CD243702 testis .a 63 to 563 22 to 526       505/1006
(50 %)
15 diff
(98.6 %id)
CX755242 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 64 to 835 33 to 795     Submitted on the opposite strand 763/797
(95 %)
22 diff
(97.3 %id)
TI_57180244   .a 64 to 690 11 to 651       641/766
(83 %)
30 diff
(96.1 %id)
DB193075 ovary, tumor tissue .a 69 to 603 2 to 538   capped   537/537
(100 %)
2 diff
(99.7 %id)
BM559465 brain, medulla .a 76 to 1007 14 to 940   available from MGC,   927/1042
(88 %)
34 diff
(96.8 %id)
BC027874 Lung, Spleen, fetal, pooled .a 86 to 1878 1 to 1793 exact tiling clone, available from MGC, AAA   1793/1793
(100 %)
0 diff
(100 %id)
BI772185 pooled lung and spleen .a 86 to 690 1 to 621   available from MGC,   621/736
(84 %)
24 diff
(96.8 %id)
NM_012337.2   .a 86 to 1878 1 to 1793 exact RefSeq, AAA   1793/1793
(100 %)
0 diff
(100 %id)
TI_149275681   .a 1009 to 1878 953 to 86   AAA   868/1047
(82 %)
19 diff
(98.2 %id)
TI_149314574   .a 1066 to 1878 887 to 80   AAA   808/956
(84 %)
17 diff
(98.3 %id)
CB321699 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 1147 to 1878 750 to 19   AAA   732/736
(99 %)
7 diff
(99.1 %id)
CA450467 Human Lung Epithelial cells, lung .a 1150 to 1878 747 to 19   AAA   729/742
(98 %)
0 diff
(100 %id)
BU676743 lung, Primary Lung Epithelial Cells .a 1157 to 1878 740 to 19   AAA   722/722
(100 %)
2 diff
(99.8 %id)
TI_149304183   .a 1175 to 1882 794 to 89   AAA   706/706
(100 %)
2 diff
(99.8 %id)
BM982042 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 1196 to 1882 703 to 19   AAA   685/685
(100 %)
2 diff
(99.8 %id)
BM310210 insulinoma, Pancreas .a 1259 to 1869 611 to 1       611/611
(100 %)
2 diff
(99.7 %id)
CK905243 insulinoma, Pancreas .a 1304 to 1878 597 to 17   AAA   581/584
(99 %)
21 diff
(96.5 %id)
AI871894 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 1369 to 1878 510 to 1       510/510
(100 %)
0 diff
(100 %id)
DB512721 testis .a 1385 to 1878 1 to 494     Submitted on the opposite strand 494/494
(100 %)
0 diff
(100 %id)
AA670460 lung, lung carcinoma .a 1414 to 1850 436 to 1       436/436
(100 %)
3 diff
(99.4 %id)
BU787475 insulinoma, Pancreas .a 1414 to 1878 481 to 17   AAA   465/465
(100 %)
0 diff
(100 %id)
CA502910 Human Lung Epithelial cells, lung .a 1539 to 1878 358 to 19   AAA   340/348
(97 %)
1 diff
(99.8 %id)
AI245615 Kidney .a 1575 to 1878 340 to 37   AAA   304/304
(100 %)
11 diff
(96.4 %id)
BX099903   .a 1590 to 1878 1 to 289   AAA   289/289
(100 %)
0 diff
(100 %id)
AI208180   .a 1628 to 1878 269 to 19   AAA   251/256
(98 %)
10 diff
(96.1 %id)
DA700400   .b 1 to 487 2 to 488   capped   487/487
(100 %)
1 diff
(99.8 %id)
DB038756 testis .b 1 to 582 2 to 583   tiling clone, capped   582/582
(100 %)
0 diff
(100 %id)
CR604695 Placenta Cot 25-normalized .b 16 to 1788 1 to 1773   tiling clone,   1773/1773
(100 %)
0 diff
(100 %id)
BX378374 Placenta Cot 25-normalized .b 16 to 952 1 to 942       942/1070
(88 %)
9 diff
(99.2 %id)
CR981168 T-Lymphocytes .b 693 to 1577 1 to 885       885/885
(100 %)
0 diff
(100 %id)
BM848459 myeloma .b 816 to 1099 1 to 283       283/293
(96 %)
8 diff
(97.3 %id)
BX378373 Placenta Cot 25-normalized .b 950 to 1788 832 to 1       832/956
(87 %)
9 diff
(99.1 %id)
DB053968 testis .c 1 to 549 2 to 550   tiling clone, capped   549/557
(98 %)
1 diff
(99.9 %id)
DB024742 testis .c 9 to 561 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
DB038188 testis .c 9 to 583 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
DB041255 testis .c 9 to 565 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DB026931 testis .c 12 to 578 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DA758906   .c 40 to 583 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DB053130 testis .c 42 to 605 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DB039747 testis .c 51 to 617 2 to 568   tiling clone, capped   567/567
(100 %)
0 diff
(100 %id)
CD557586 testis .c 61 to 843 1 to 791   AAA   791/935
(84 %)
16 diff
(98.3 %id)
BC089391 testis .c 65 to 2052 1 to 1988   tiling clone, AAA   1988/1988
(100 %)
1 diff
(100.0 %id)
NM_001013661.1   .d 1 to 1818 1 to 1818 exact RefSeq,   1818/1818
(100 %)
0 diff
(100 %id)
TI_1210518716   .d 103 to 558 471 to 17   tiling clone,   455/853
(53 %)
0 diff
(100 %id)
DY655806 pooled .d 105 to 552 450 to 3       448/450
(99 %)
0 diff
(100 %id)
BC132893 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .d 109 to 1545 1 to 1437   tiling clone,   1437/1437
(100 %)
0 diff
(100 %id)
BC132895 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .d 109 to 1545 1 to 1437       1437/1437
(100 %)
0 diff
(100 %id)
TI_1752770274   .d 109 to 794 685 to 3       683/1267
(53 %)
0 diff
(100 %id)
DY655805 pooled .d 140 to 590 1 to 451       451/451
(100 %)
0 diff
(100 %id)
TI_1752770412   .d 311 to 1415 1110 to 9       1102/1246
(88 %)
9 diff
(99.3 %id)
TI_1752769892   .d 525 to 1552 1086 to 65       1022/1229
(83 %)
6 diff
(99.6 %id)
DV080584 pooled .d 532 to 950 419 to 1     Submitted on the opposite strand 419/419
(100 %)
3 diff
(99.3 %id)
TI_985974528   .d 560 to 975 33 to 444       416/477
(87 %)
11 diff
(97.7 %id)
DV080583 pooled .d 654 to 978 1 to 326       326/326
(100 %)
2 diff
(99.4 %id)
TI_1752771480   .d 701 to 1553 1093 to 242       852/1186
(71 %)
11 diff
(99.1 %id)
TI_1752770406   .d 773 to 1553 14 to 794       781/1206
(64 %)
5 diff
(99.6 %id)
TI_1752770404   .d 1126 to 1553 15 to 441       427/1256
(33 %)
6 diff
(99.6 %id)
BE042480 colon, moderately-differentiated adenocarcinoma .d 1492 to 1817 326 to 1   tiling clone,   326/326
(100 %)
1 diff
(99.7 %id)
BC064386 Brain, adult medulla .e 1 to 1842 1 to 1842 exact tiling clone, available from MGC, AAA   1842/1842
(100 %)
0 diff
(100 %id)
AK308262 testis .f 1 to 1264 1 to 1262 V248G E249T Q250D M251G E252K ... tiling clone,   1262/1262
(100 %)
3 diff
(99.8 %id)
AK096506 brain .g 1 to 2500 2 to 2501 K106* tiling clone, available from FLJ,   2501/2501
(100 %)
5 diff
(99.9 %id)
NM_001134233.1   .g 1 to 2500 2 to 2501   RefSeq,   2501/2501
(100 %)
0 diff
(100 %id)
DA771503 brain .g 1 to 575 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
BX355705 Placenta Cot 25-normalized .g 304 to 843 1 to 538       538/538
(100 %)
2 diff
(99.7 %id)
TI_57215794   .g 355 to 1156 29 to 827   tiling clone,   799/829
(96 %)
10 diff
(98.8 %id)
BI754345 brain .g 362 to 1156 1 to 792   tiling clone,   792/794
(99 %)
5 diff
(99.4 %id)
DA354351 substantia nigra .g 370 to 946 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA840138 placenta .h 1 to 556 2 to 557   tiling clone, capped   556/556
(100 %)
1 diff
(99.9 %id)
AY007127   .h 24 to 1620 1 to 1597 exact tiling clone, AAA   1597/1597
(100 %)
0 diff
(100 %id)
DA836879 placenta .i 1 to 554 2 to 555   tiling clone, capped   554/554
(100 %)
1 diff
(99.9 %id)
BC109055 PCR rescued clones .i 136 to 1836 1 to 1701 exact tiling clone,   1701/1702
(99 %)
1 diff
(100.0 %id)
BP260872 small intestine .j 1 to 581 2 to 582   tiling clone,   582/582
(100 %)
1 diff
(99.9 %id)
DR763615 embryonic stem .j 11 to 862 1 to 852 exact     852/852
(100 %)
1 diff
(99.9 %id)
CR987512 T-Lymphocytes .j 32 to 791 1 to 760 exact     760/760
(100 %)
0 diff
(100 %id)
CR594260 placenta .j 80 to 1395 1 to 1316 exact     1316/1316
(100 %)
0 diff
(100 %id)
CR604118 Placenta Cot 25-normalized .j 80 to 1413 1 to 1334 exact tiling clone,   1334/1334
(100 %)
0 diff
(100 %id)
CR611788 Placenta Cot 25-normalized .j 80 to 1371 1 to 1292 exact     1292/1292
(100 %)
0 diff
(100 %id)
BG753049 eye, normal pigmented retinal epithelium .k 1 to 782 1 to 785   tiling clone,   785/787
(99 %)
8 diff
(99.0 %id)
BE548405 cervical carcinoma cell line, cervix .k 4 to 702 1 to 704   tiling clone,   704/960
(73 %)
27 diff
(97.2 %id)
BG990011 head_neck .k 704 to 1075 388 to 5   tiling clone,   384/394
(97 %)
0 diff
(100 %id)
BF873085 lung_tumor .k 951 to 1240 291 to 3   tiling clone, Submitted on the opposite strand 289/332
(87 %)
12 diff
(96.4 %id)
AW963559   .l 1 to 587 1 to 587   tiling clone,   587/593
(98 %)
14 diff
(97.7 %id)
CN273962 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .l 1 to 443 1 to 445       445/445
(100 %)
4 diff
(99.2 %id)
BE269020 Burkitt lymphoma, lymph .l 1 to 510 1 to 511       511/512
(99 %)
3 diff
(99.5 %id)
BE728219 melanotic melanoma, skin .l 1 to 898 1 to 909 W150L F151V K153* tiling clone,   885/1219
(72 %)
52 diff
(95.8 %id)
BF125863 melanotic melanoma, skin .l 1 to 705 1 to 707 L167C Q168K E169R G170A K171R ...     707/886
(79 %)
27 diff
(97.0 %id)
BG164905 hypernephroma, cell line, Kidney .l 1 to 679 1 to 675 N181K R182P G183R A184G S185V ...     675/679
(99 %)
13 diff
(98.1 %id)
BQ050088 lymph, lymphoma, cell line .l 1 to 735 1 to 738 exact     738/888
(83 %)
14 diff
(98.5 %id)
BU192314 large cell carcinoma, lung .l 1 to 852 1 to 866 G188X tiling clone,   866/929
(93 %)
21 diff
(97.8 %id)
BU192425 large cell carcinoma, lung .l 1 to 871 1 to 879 exact tiling clone,   879/879
(100 %)
14 diff
(98.5 %id)
BQ437027 embryonal carcinoma, cell line, testis .l 1 to 853 1 to 858 exact tiling clone,   858/884
(97 %)
28 diff
(96.9 %id)
CR601283 Neuroblastoma Cot 10-normalized .m 1 to 1394 1 to 1394 exact tiling clone,   1394/1394
(100 %)
0 diff
(100 %id)
BU161627 melanotic melanoma, skin .m 19 to 793 1 to 779 exact     779/837
(93 %)
6 diff
(99.3 %id)
BM478992 melanotic melanoma, skin .m 22 to 1048 1 to 1032 exact     1032/1101
(93 %)
17 diff
(98.5 %id)
CF272193 Brain glioblastoma .m 23 to 853 1 to 831 exact     831/883
(94 %)
1 diff
(99.9 %id)
BQ071459 brain, neuroblastoma, cell line .m 25 to 853 1 to 831 N181H     831/1053
(78 %)
8 diff
(99.3 %id)
CR621820 Placenta Cot 25-normalized .m 30 to 1385 1 to 1356 exact     1356/1356
(100 %)
0 diff
(100 %id)
CX166260 human embryonic stem cells differentiated toan early endodermal cell type .m 38 to 841 1 to 804 exact     804/804
(100 %)
0 diff
(100 %id)
BM015698 breast, mammary adenocarcinoma, cell line .m 43 to 837 1 to 806 L199S     806/967
(83 %)
22 diff
(97.8 %id)
AK291562 placenta .m 44 to 1177 1 to 1134 exact     1134/1134
(100 %)
0 diff
(100 %id)
BQ882014 brain, neuroblastoma, cell line .m 45 to 890 1 to 855 exact     855/918
(93 %)
16 diff
(98.3 %id)
DB442894 testis .m 50 to 291 1 to 244       244/259
(94 %)
9 diff
(96.6 %id)
BQ437872 melanotic melanoma, skin .m 51 to 853 1 to 802 exact     802/883
(90 %)
4 diff
(99.6 %id)
BX425365 neuroblastoma .m 53 to 1144 1 to 1084 I18X G175X M178X I198X     1084/1094
(99 %)
14 diff
(98.8 %id)
CR590142 Placenta Cot 25-normalized .m 53 to 1379 1 to 1327 exact     1327/1327
(100 %)
0 diff
(100 %id)
AL546805 placenta, Placenta Cot 25-normalized .m 53 to 550 1 to 498   fully sequenced,   498/498
(100 %)
0 diff
(100 %id)
BX366789 Placenta Cot 25-normalized .m 53 to 238 1 to 186       186/186
(100 %)
0 diff
(100 %id)
BM907428 large cell carcinoma, lung .m 53 to 1004 1 to 967 exact     967/978
(98 %)
16 diff
(98.4 %id)
BM913943 astrocytoma grade IV, cell line, brain .m 55 to 1021 1 to 972 exact     972/1076
(90 %)
25 diff
(97.7 %id)
BU147131 eye, normal pigmented retinal epithelium .m 55 to 962 1 to 911 exact     911/911
(100 %)
4 diff
(99.6 %id)
AA248323   .m 56 to 200 1 to 144       144/156
(92 %)
14 diff
(91.1 %id)
CR602105 Placenta Cot 25-normalized .m 57 to 1370 1 to 1314 exact     1314/1314
(100 %)
0 diff
(100 %id)
CR614100 HeLa cells Cot 25-normalized .m 57 to 1368 1 to 1312 exact     1312/1312
(100 %)
0 diff
(100 %id)
D21261   .m 57 to 1416 1 to 1360 exact available from KIAA,   1360/1360
(100 %)
2 diff
(99.9 %id)
BM914368 Spleen .m 57 to 853 1 to 798 exact     798/1020
(78 %)
9 diff
(99.2 %id)
BQ708453 Spleen .m 57 to 886 1 to 835 exact     835/866
(96 %)
12 diff
(98.7 %id)
NM_003564.1   .m 57 to 1416 1 to 1360 exact RefSeq,   1360/1360
(100 %)
2 diff
(99.9 %id)
CR618563 Placenta Cot 25-normalized .m 58 to 1388 1 to 1331 exact     1331/1331
(100 %)
0 diff
(100 %id)
CR599010 Placenta Cot 25-normalized .m 59 to 1379 1 to 1321 exact     1321/1321
(100 %)
0 diff
(100 %id)
CR620855 Placenta Cot 25-normalized .m 59 to 1382 1 to 1324 exact     1324/1324
(100 %)
0 diff
(100 %id)
CR624026 Placenta Cot 25-normalized .m 59 to 1372 1 to 1314 exact     1314/1314
(100 %)
0 diff
(100 %id)
BX422121 T cells (Jurkat cell line) .m 59 to 1071 1 to 1005 exact     1005/1012
(99 %)
17 diff
(98.4 %id)
AL544765 placenta, Placenta Cot 25-normalized .m 59 to 1040 1 to 974 D140B     974/978
(99 %)
10 diff
(99.0 %id)
AL548177 placenta, Placenta Cot 25-normalized .m 59 to 552 1 to 494   fully sequenced,   494/494
(100 %)
0 diff
(100 %id)
BQ213970 embryonal carcinoma, cell line, testis .m 59 to 914 1 to 857 exact     857/857
(100 %)
2 diff
(99.8 %id)
CR592747 Placenta Cot 25-normalized .m 60 to 1388 1 to 1329 exact     1329/1329
(100 %)
0 diff
(100 %id)
CR607855 T cells (Jurkat cell line) Cot10-normalized .m 60 to 1412 1 to 1353 exact     1353/1353
(100 %)
0 diff
(100 %id)
CR608199 Placenta Cot 25-normalized .m 60 to 1420 1 to 1361 exact     1361/1361
(100 %)
0 diff
(100 %id)
CR608276 Neuroblastoma Cot 25-normalized .m 60 to 1381 1 to 1322 exact     1322/1322
(100 %)
0 diff
(100 %id)
CR609748 Placenta Cot 25-normalized .m 60 to 1385 1 to 1326 exact     1326/1326
(100 %)
0 diff
(100 %id)
CR613098 Placenta Cot 25-normalized .m 60 to 1368 1 to 1309 exact     1309/1309
(100 %)
0 diff
(100 %id)
CR618095 Placenta Cot 25-normalized .m 60 to 1413 1 to 1354 exact     1354/1354
(100 %)
0 diff
(100 %id)
BX340292 Placenta Cot 25-normalized .m 60 to 667 1 to 608   fully sequenced,   608/608
(100 %)
0 diff
(100 %id)
BM564199 blood, natural killer cells, cell line .m 60 to 1053 1 to 987 exact     987/1127
(87 %)
22 diff
(98.1 %id)
BM919333 pooled pancreas and spleen .m 60 to 1022 1 to 967 exact     967/1060
(91 %)
20 diff
(98.2 %id)
AI751279 Bone, Hip .m 60 to 265 179 to 384       206/212
(97 %)
6 diff
(97.2 %id)
CR610006 placenta .m 61 to 1409 1 to 1349 exact     1349/1349
(100 %)
0 diff
(100 %id)
CR613520 HeLa cells Cot 25-normalized .m 61 to 1394 1 to 1334 exact     1334/1334
(100 %)
0 diff
(100 %id)
BQ441680 large cell carcinoma, lung .m 61 to 853 1 to 790 exact     790/889
(88 %)
5 diff
(99.5 %id)
BQ223789 embryonal carcinoma, cell line, testis .m 61 to 853 1 to 800 exact     800/970
(82 %)
11 diff
(98.9 %id)
BQ719228 sympathetic trunk .m 61 to 942 1 to 883 exact     883/888
(99 %)
15 diff
(98.4 %id)
CR604476 Placenta Cot 25-normalized .m 62 to 1401 1 to 1340 exact     1340/1340
(100 %)
0 diff
(100 %id)
CR608575 Placenta Cot 25-normalized .m 62 to 1388 1 to 1327 exact     1327/1327
(100 %)
0 diff
(100 %id)
AL547597 placenta, Placenta Cot 25-normalized .m 62 to 551 1 to 490   fully sequenced,   490/490
(100 %)
0 diff
(100 %id)
AL547570 placenta, Placenta Cot 25-normalized .m 62 to 811 1 to 742 exact fully sequenced,   742/742
(100 %)
0 diff
(100 %id)
BQ071090 brain, neuroblastoma, cell line .m 62 to 853 1 to 793 exact     793/972
(81 %)
2 diff
(99.8 %id)
BU500757   .m 62 to 936 1 to 881 exact     881/881
(100 %)
9 diff
(99.0 %id)
BQ707998 Spleen .m 62 to 860 1 to 799 exact     799/954
(83 %)
6 diff
(99.4 %id)
BQ948140 epidermoid carcinoma, cell line, lung .m 62 to 921 1 to 868 exact     868/868
(100 %)
15 diff
(98.3 %id)
BQ931461 epidermoid carcinoma, cell line, lung .m 62 to 918 1 to 857 exact     857/857
(100 %)
0 diff
(100 %id)
CD617217   .m 63 to 470 408 to 1       408/415
(98 %)
1 diff
(99.8 %id)
CD617215   .m 64 to 755 703 to 12 R4Q P6T A7C Y8I G9W ...     692/703
(98 %)
1 diff
(99.9 %id)
CR609777 Placenta Cot 25-normalized .m 64 to 1402 1 to 1339 exact     1339/1339
(100 %)
0 diff
(100 %id)
CR621369 fetal brain .m 64 to 1386 1 to 1323 exact     1323/1323
(100 %)
0 diff
(100 %id)
BM919816 pooled pancreas and spleen .m 64 to 1015 1 to 974 exact     974/1004
(97 %)
30 diff
(97.1 %id)
BG676813 skin, squamous cell carcinoma .m 65 to 879 1 to 825 L199F     825/878
(93 %)
30 diff
(96.6 %id)
BU186391 large cell carcinoma, lung .m 65 to 951 1 to 906 exact     906/906
(100 %)
24 diff
(97.4 %id)
BQ422571 melanotic melanoma, skin .m 65 to 905 1 to 847 exact     847/868
(97 %)
17 diff
(98.1 %id)
CR623657 fetal brain .m 66 to 1400 1 to 1335 exact     1335/1335
(100 %)
0 diff
(100 %id)
CD617231   .m 67 to 770 792 to 91 S11T R12G E13R V14C Q15S ...     702/750
(93 %)
6 diff
(99.2 %id)
BQ053841 blood, natural killer cells, cell line .m 67 to 1019 1 to 961 exact     961/991
(96 %)
15 diff
(98.5 %id)
BU543587 carcinoma, cell line, Prostate .m 67 to 853 1 to 785 exact     785/914
(85 %)
5 diff
(99.5 %id)
CD579386 brain .m 68 to 901 1 to 825 exact     825/937
(88 %)
21 diff
(97.8 %id)
BM915429 amelanotic melanoma, cell line, skin .m 69 to 1083 1 to 1022 exact     1022/1036
(98 %)
25 diff
(97.6 %id)
BU543530 carcinoma, cell line, Prostate .m 69 to 945 1 to 891 exact     891/893
(99 %)
19 diff
(97.9 %id)
BQ278920 adenocarcinoma, cell line, breast .m 70 to 877 1 to 813 exact     813/924
(87 %)
6 diff
(99.4 %id)
BQ642835 lymph, lymphoma, cell line .m 70 to 971 1 to 910 exact     910/912
(99 %)
11 diff
(98.8 %id)
BU542637 carcinoma, cell line, Prostate .m 70 to 897 1 to 830 exact     830/831
(99 %)
3 diff
(99.7 %id)
CR987895 T-Lymphocytes .m 70 to 1005 1 to 942 V173X     942/942
(100 %)
5 diff
(99.5 %id)
CR996066 T-Lymphocytes .m 70 to 864 1 to 797 exact     797/797
(100 %)
2 diff
(99.8 %id)
BQ949918 epidermoid carcinoma, cell line, lung .m 71 to 1024 1 to 961 exact     961/963
(99 %)
27 diff
(97.2 %id)
BY795529 eye .m 72 to 869 1 to 799 exact     799/799
(100 %)
2 diff
(99.8 %id)
BQ217066 large cell carcinoma, lung .m 72 to 860 1 to 791 exact     791/857
(92 %)
4 diff
(99.6 %id)
CR592851 Placenta Cot 25-normalized .m 74 to 1377 1 to 1304 exact     1304/1304
(100 %)
0 diff
(100 %id)
CR622397 Placenta Cot 25-normalized .m 74 to 1380 1 to 1307 exact     1307/1307
(100 %)
0 diff
(100 %id)
CR626596 placenta .m 74 to 1390 1 to 1317 exact     1317/1317
(100 %)
0 diff
(100 %id)
AL544550 placenta, Placenta Cot 25-normalized .m 74 to 515 1 to 442   fully sequenced,   442/442
(100 %)
0 diff
(100 %id)
ES312581 frontal balding hair, skin .m 74 to 256 1 to 182       182/182
(100 %)
3 diff
(98.4 %id)
BQ887337 carcinoma, cell line, Prostate .m 74 to 974 1 to 901 exact     901/902
(99 %)
19 diff
(97.9 %id)
DA830023 placenta .m 74 to 902 2 to 837 G188X Y192L G193R M194D P195A ... capped   836/966
(86 %)
14 diff
(98.6 %id)
CR624984 placenta .m 75 to 1411 1 to 1337 exact     1337/1337
(100 %)
0 diff
(100 %id)
BQ931873 epidermoid carcinoma, cell line, lung .m 75 to 965 1 to 905 exact     905/908
(99 %)
16 diff
(98.3 %id)
BU526825 epidermoid carcinoma, cell line, lung .m 75 to 991 1 to 928 exact     928/930
(99 %)
20 diff
(97.9 %id)
BU528081 epidermoid carcinoma, cell line, lung .m 75 to 961 1 to 896 exact     896/906
(98 %)
18 diff
(98.1 %id)
BQ220329 melanotic melanoma, skin .m 76 to 853 1 to 786 exact     786/875
(89 %)
14 diff
(98.4 %id)
CR980572 T-Lymphocytes .m 76 to 1002 1 to 928 exact     928/929
(99 %)
5 diff
(99.5 %id)
CN273936 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .m 77 to 853 1 to 777 exact     777/778
(99 %)
2 diff
(99.8 %id)
CR609407 Placenta Cot 25-normalized .m 77 to 1357 1 to 1281 exact     1281/1281
(100 %)
0 diff
(100 %id)
CR612553 Placenta Cot 25-normalized .m 77 to 1215 1 to 1139 exact     1139/1139
(100 %)
0 diff
(100 %id)
BE900906 choriocarcinoma, placenta .m 77 to 897 1 to 828 G193R M194D P195A R196T Q197P ...     828/902
(91 %)
30 diff
(96.7 %id)
BU528246 epidermoid carcinoma, cell line, lung .m 77 to 988 1 to 925 exact     925/928
(99 %)
19 diff
(98.0 %id)
TI_57233599   .m 77 to 432 36 to 394       359/1083
(33 %)
12 diff
(98.9 %id)
CR992460 T-Lymphocytes .m 79 to 1017 1 to 937 exact     937/937
(100 %)
2 diff
(99.8 %id)
CR996825 T-Lymphocytes .m 79 to 1011 1 to 935 exact     935/935
(100 %)
4 diff
(99.6 %id)
CR993310 T-Lymphocytes .m 79 to 877 1 to 801 exact     801/802
(99 %)
3 diff
(99.7 %id)
CR607405 Placenta Cot 25-normalized .m 80 to 1380 1 to 1301 exact     1301/1301
(100 %)
0 diff
(100 %id)
BE902686 choriocarcinoma, placenta .m 80 to 933 1 to 848 P195H R196A Q197R I198S     848/880
(96 %)
35 diff
(96.1 %id)
BM046309 carcinoma, cell line, Prostate .m 81 to 996 1 to 941 Y192L G193R M194D P195A R196T ...     830/945
(87 %)
24 diff
(97.5 %id)
BM552414 astrocytoma grade IV, cell line, brain .m 81 to 1015 1 to 945 exact     945/999
(94 %)
18 diff
(98.2 %id)
BC009357 Uterus, leiomyosarcoma .m 82 to 1416 1 to 1335 exact tiling clone, available from MGC, AAA   1335/1335
(100 %)
0 diff
(100 %id)
BE560688 Burkitt lymphoma, lymph .m 82 to 873 1 to 787 A187G G188R M189H T190D G191W ...     787/910
(86 %)
22 diff
(97.6 %id)
BU169180 ductal carcinoma, cell line, Pancreas .m 82 to 902 1 to 829 exact     829/919
(90 %)
12 diff
(98.7 %id)
BU168883 ductal carcinoma, cell line, Pancreas .m 82 to 931 1 to 856 exact     856/859
(99 %)
11 diff
(98.8 %id)
BQ716446 sympathetic trunk .m 82 to 949 1 to 872 exact     872/873
(99 %)
19 diff
(97.9 %id)
BQ681780 melanotic melanoma, cell line, skin .m 82 to 993 1 to 919 exact     919/958
(95 %)
39 diff
(96.0 %id)
BQ681135 melanotic melanoma, cell line, skin .m 82 to 983 1 to 905 exact     905/907
(99 %)
11 diff
(98.8 %id)
BQ877154 epidermoid carcinoma, cell line, lung .m 82 to 928 1 to 858 exact     858/918
(93 %)
16 diff
(98.3 %id)
BQ953536 epidermoid carcinoma, cell line, lung .m 82 to 1031 1 to 957 exact     957/958
(99 %)
17 diff
(98.3 %id)
BU542745 carcinoma, cell line, Prostate .m 82 to 858 1 to 780 exact     780/877
(88 %)
7 diff
(99.3 %id)
BU552535 carcinoma, cell line, Prostate .m 82 to 982 1 to 905 exact     905/906
(99 %)
8 diff
(99.2 %id)
BU556524 ovary, teratocarcinoma, cell line .m 82 to 928 1 to 856 exact     856/980
(87 %)
17 diff
(98.3 %id)
CR994514 T-Lymphocytes .m 82 to 987 1 to 910 exact     910/912
(99 %)
7 diff
(99.3 %id)
CR975592 T-Lymphocytes .m 82 to 991 1 to 909 exact     909/909
(100 %)
2 diff
(99.8 %id)
ES314420 occipital scalp hair, skin .m 84 to 236 1 to 153       153/153
(100 %)
0 diff
(100 %id)
BM917631 blood, natural killer cells, cell line .m 84 to 988 1 to 920 exact     920/1036
(88 %)
22 diff
(97.9 %id)
BQ064944 lymph, lymphoma, cell line .m 84 to 907 1 to 835 exact     835/1008
(82 %)
16 diff
(98.5 %id)
BQ053684 blood, natural killer cells, cell line .m 84 to 928 1 to 859 Q186P     859/1041
(82 %)
22 diff
(97.9 %id)
BQ929055 carcinoma, cell line, Prostate .m 84 to 1048 1 to 978 exact     978/1000
(97 %)
32 diff
(96.8 %id)
AL548769 placenta, Placenta Cot 25-normalized .m 87 to 784 9 to 706 exact fully sequenced,   698/706
(98 %)
0 diff
(100 %id)
BG105856 lymph, lymphoma, cell line .m 87 to 884 1 to 814 L199P     814/996
(81 %)
20 diff
(98.0 %id)
TI_154194438   .m 88 to 1038 51 to 987 exact     937/1057
(88 %)
24 diff
(97.8 %id)
BQ051493 blood, natural killer cells, cell line .m 89 to 974 1 to 905 exact     905/917
(98 %)
22 diff
(97.7 %id)
BM541919 melanotic melanoma, skin .m 90 to 1012 1 to 931 exact     931/1038
(89 %)
12 diff
(98.9 %id)
BQ053004 blood, natural killer cells, cell line .m 90 to 987 1 to 908 exact     908/1081
(83 %)
25 diff
(97.7 %id)
BQ066807 lymph, lymphoma, cell line .m 94 to 1088 2 to 1013 exact     1012/1015
(99 %)
45 diff
(95.6 %id)
BQ881534 brain, neuroblastoma, cell line .m 96 to 1015 1 to 922 exact     922/922
(100 %)
8 diff
(99.2 %id)
CR591926 Placenta Cot 25-normalized .m 102 to 1345 1 to 1245 exact     1245/1245
(100 %)
1 diff
(100.0 %id)
CR611080 Neuroblastoma Cot 25-normalized .m 102 to 1367 1 to 1267 exact     1267/1267
(100 %)
1 diff
(100.0 %id)
CR617101 placenta .m 102 to 1386 1 to 1286 exact     1286/1286
(100 %)
1 diff
(100.0 %id)
CR618634 thymus .m 102 to 1390 1 to 1290 exact     1290/1290
(100 %)
1 diff
(100.0 %id)
CR625445 Placenta Cot 25-normalized .m 102 to 1346 1 to 1246 exact     1246/1246
(100 %)
1 diff
(100.0 %id)
AL544598 placenta, Placenta Cot 25-normalized .m 102 to 1200 1 to 1097 exact     1097/1119
(98 %)
10 diff
(99.2 %id)
CF264943 Brain glioblastoma .m 102 to 954 1 to 859 exact     859/862
(99 %)
8 diff
(99.1 %id)
BE615161 adenocarcinoma, Pancreas .m 105 to 905 1 to 798 L199F     798/853
(93 %)
29 diff
(96.7 %id)
BE615434 adenocarcinoma, Pancreas .m 106 to 941 1 to 840 L199F     840/1103
(76 %)
39 diff
(96.5 %id)
CR590131 Placenta Cot 25-normalized .m 107 to 1378 1 to 1272 exact     1272/1272
(100 %)
0 diff
(100 %id)
CR606060 Placenta Cot 25-normalized .m 107 to 1373 1 to 1267 exact     1267/1267
(100 %)
0 diff
(100 %id)
CR623124 Placenta Cot 25-normalized .m 107 to 1372 1 to 1266 exact     1266/1266
(100 %)
0 diff
(100 %id)
AL553010.
matches multiple genes
placenta, Placenta Cot 25-normalized .m 107 to 1116 1 to 997 exact   also hits gene TAGLN2 997/1057
(94 %)
20 diff
(98.2 %id)
BQ919397 carcinoma, cell line, Prostate .m 109 to 952 1 to 851 exact     851/856
(99 %)
26 diff
(97.0 %id)
BQ050472 leiomyosarcoma, uterus .m 110 to 1012 1 to 912 exact     912/975
(93 %)
17 diff
(98.3 %id)
BQ691677 ductal carcinoma, cell line, Pancreas .m 111 to 928 1 to 827 exact     827/884
(93 %)
14 diff
(98.5 %id)
BQ899315 sciatic nerve .m 114 to 990 1 to 893 exact     893/896
(99 %)
31 diff
(96.6 %id)
BE731319 choriocarcinoma, placenta .m 120 to 928 1 to 803 L199S     803/803
(100 %)
25 diff
(96.9 %id)
BQ882362 lymph, lymphoma, cell line .m 121 to 950 1 to 841 exact     841/929
(90 %)
13 diff
(98.7 %id)
CF272521 Brain glioblastoma .m 127 to 1006 1 to 887 exact     887/905
(98 %)
15 diff
(98.4 %id)
CR996000 T-Lymphocytes .m 127 to 979 1 to 853 exact     853/854
(99 %)
7 diff
(99.2 %id)
CR974720 T-Lymphocytes .m 127 to 1005 1 to 881 exact     881/881
(100 %)
2 diff
(99.8 %id)
CR989819 T-Lymphocytes .m 127 to 1033 1 to 905 exact     905/909
(99 %)
3 diff
(99.7 %id)
CR982987 T-Lymphocytes .m 127 to 1006 1 to 888 exact     888/888
(100 %)
7 diff
(99.3 %id)
BM457781 lymph, lymphoma, cell line .m 128 to 1005 1 to 883 exact     883/883
(100 %)
5 diff
(99.5 %id)
BQ056702 lymph, lymphoma, cell line .m 128 to 1084 1 to 970 exact     970/970
(100 %)
23 diff
(97.7 %id)
BQ064336 lymph, lymphoma, cell line .m 128 to 1046 1 to 926 exact     926/950
(97 %)
20 diff
(97.9 %id)
BQ957566 large cell carcinoma, lung .m 128 to 1017 1 to 895 exact     895/904
(99 %)
17 diff
(98.2 %id)
BU541662 carcinoma, cell line, Prostate .m 128 to 1017 1 to 900 exact     900/919
(97 %)
17 diff
(98.2 %id)
CR542126   .m 130 to 729 1 to 600 exact     600/600
(100 %)
0 diff
(100 %id)
CR542136   .m 130 to 726 1 to 597       597/597
(100 %)
0 diff
(100 %id)
BQ641788 eye, normal pigmented retinal epithelium .m 130 to 988 1 to 876 exact     876/930
(94 %)
29 diff
(96.9 %id)
BF820689 kidney_tumor .m 139 to 496 370 to 5     Submitted on the opposite strand 366/412
(88 %)
16 diff
(96.2 %id)
CX866384 embryonic stem .m 146 to 968 1 to 824       824/824
(100 %)
1 diff
(99.9 %id)
BQ897237 melanotic melanoma, cell line, skin .m 148 to 1046 1 to 906       906/908
(99 %)
11 diff
(98.8 %id)
BQ707667 Spleen .m 153 to 961 1 to 811       811/898
(90 %)
12 diff
(98.7 %id)
BQ053039 blood, natural killer cells, cell line .m 165 to 1168 1 to 1013       1013/1013
(100 %)
18 diff
(98.3 %id)
CR603278 B cells (Ramos cell line) .m 177 to 1322 1 to 1146       1146/1146
(100 %)
0 diff
(100 %id)
BE840410 prostate_normal .m 192 to 591 425 to 26       400/425
(94 %)
1 diff
(99.8 %id)
BQ924161 epidermoid carcinoma, cell line, lung .m 213 to 1171 1 to 961       961/962
(99 %)
18 diff
(98.2 %id)
BU183965 melanotic melanoma, skin .m 216 to 1021 1 to 831       831/904
(91 %)
9 diff
(99.1 %id)
BQ672357 epidermoid carcinoma, cell line, salivary gland .m 221 to 1116 1 to 908       908/910
(99 %)
30 diff
(96.8 %id)
AL572512.
matches multiple genes
placenta, Placenta Cot 25-normalized .m 236 to 1382 1139 to 1     also hits gene TAGLN2 1139/1139
(100 %)
16 diff
(98.6 %id)
BU164676 embryonal carcinoma, cell line, testis .m 275 to 1146 1 to 882       882/882
(100 %)
11 diff
(98.8 %id)
FN096368 breast carcinoma .m 296 to 365 70 to 1     Submitted on the opposite strand 70/71
(98 %)
0 diff
(100 %id)
BE929189 placenta_normal .m 302 to 431 128 to 2       127/131
(96 %)
0 diff
(100 %id)
BU600957 mixed (pool of 40 RNAs) .m 305 to 1117 1 to 813       813/814
(99 %)
9 diff
(98.9 %id)
BQ054361 blood, natural killer cells, cell line .m 306 to 1192 1 to 895       895/945
(94 %)
15 diff
(98.5 %id)
AW577421 breast .m 309 to 902 615 to 22       594/629
(94 %)
7 diff
(98.9 %id)
BE302480 melanotic melanoma, skin .m 332 to 947 617 to 2     Submitted on the opposite strand 616/617
(99 %)
1 diff
(99.9 %id)
BQ673861 epidermoid carcinoma, cell line, salivary gland .m 336 to 1223 1 to 891       891/921
(96 %)
10 diff
(99.0 %id)
CD617232   .m 339 to 976 640 to 1       640/779
(82 %)
6 diff
(99.3 %id)
TI_159686534   .m 364 to 1416 1062 to 26   AAA   963/1038
(92 %)
33 diff
(96.9 %id)
BU860069 adenocarcinoma, cell line, breast .m 378 to 1249 1 to 877       877/922
(95 %)
15 diff
(98.4 %id)
BQ367807 placenta_normal .m 394 to 485 104 to 13       92/104
(88 %)
0 diff
(100 %id)
BG680062 skin, squamous cell carcinoma .m 403 to 1342 1 to 939       939/971
(96 %)
32 diff
(96.8 %id)
BQ706606 Spleen .m 412 to 1223 1 to 817       817/910
(89 %)
13 diff
(98.6 %id)
CR621323 Placenta Cot 25-normalized .m 416 to 1401 1 to 986       986/986
(100 %)
0 diff
(100 %id)
AL553642.
matches multiple genes
placenta, Placenta Cot 25-normalized .m 416 to 1260 1 to 845     also hits gene TAGLN2 845/845
(100 %)
0 diff
(100 %id)
BI020531 marrow .m 438 to 555 126 to 12       115/139
(82 %)
0 diff
(100 %id)
AL570637 placenta, Placenta Cot 25-normalized .m 454 to 1380 925 to 1   fully sequenced,   925/925
(100 %)
3 diff
(99.7 %id)
AL572982 placenta, Placenta Cot 25-normalized .m 456 to 1383 926 to 1       926/1031
(89 %)
9 diff
(99.2 %id)
TI_57191613   .m 475 to 1392 88 to 1014       927/935
(99 %)
24 diff
(97.5 %id)
BF914429 uterus_tumor .m 482 to 925 444 to 1     Submitted on the opposite strand 444/444
(100 %)
1 diff
(99.8 %id)
CN484495 eye .m 492 to 1011 1 to 520   fully sequenced,   520/520
(100 %)
0 diff
(100 %id)
BI090515 cervix .m 509 to 1323 1 to 819       819/819
(100 %)
9 diff
(99.0 %id)
AL572007 placenta, Placenta Cot 25-normalized .m 520 to 1379 859 to 1   fully sequenced,   859/859
(100 %)
11 diff
(98.8 %id)
AL547582 placenta, Placenta Cot 25-normalized .m 521 to 1387 881 to 15   fully sequenced,   867/881
(98 %)
0 diff
(100 %id)
AL572830 placenta, Placenta Cot 25-normalized .m 522 to 1368 861 to 12   fully sequenced,   850/861
(98 %)
1 diff
(99.9 %id)
AL570784 placenta, Placenta Cot 25-normalized .m 553 to 797 1196 to 956     Submitted on the opposite strand 241/1201
(20 %)
4 diff
(99.7 %id)
BE775038 uterus .m 567 to 954 388 to 1       388/388
(100 %)
33 diff
(91.5 %id)
AI751280 Bone, Hip .m 576 to 1110 543 to 8       536/543
(98 %)
0 diff
(100 %id)
BQ678023 melanotic melanoma, cell line, skin .m 580 to 1415 859 to 21   AAA Submitted on the opposite strand 839/904
(92 %)
15 diff
(98.4 %id)
TI_149292322   .m 583 to 1416 907 to 80   AAA   828/929
(89 %)
11 diff
(98.9 %id)
TI_154126557   .m 583 to 1416 904 to 77   AAA   828/975
(84 %)
10 diff
(99.0 %id)
TI_149314492   .m 584 to 1421 911 to 82   AAA   830/966
(85 %)
14 diff
(98.6 %id)
TI_149314896   .m 586 to 1416 913 to 84   AAA   830/1026
(80 %)
4 diff
(99.7 %id)
TI_154125251   .m 602 to 1416 894 to 91   AAA   804/949
(84 %)
16 diff
(98.4 %id)
BX330733 Placenta Cot 25-normalized .m 637 to 1413 784 to 1   fully sequenced,   784/784
(100 %)
38 diff
(95.2 %id)
CR616442 Placenta Cot 25-normalized .m 649 to 1418 1 to 770       770/770
(100 %)
0 diff
(100 %id)
BU196771 melanotic melanoma, cell line, skin .m 706 to 1415 734 to 21   AAA Submitted on the opposite strand 714/940
(75 %)
8 diff
(99.2 %id)
BY998889   .m 728 to 1254 1 to 527     Submitted on the opposite strand 527/527
(100 %)
0 diff
(100 %id)
BM561753 blood, natural killer cells, cell line .m 731 to 1421 729 to 29   AAA Submitted on the opposite strand 701/902
(77 %)
12 diff
(98.7 %id)
AL548728 placenta, Placenta Cot 25-normalized .m 754 to 1371 622 to 1   fully sequenced,   622/622
(100 %)
6 diff
(99.1 %id)
BG938489 Bone, Hip .m 770 to 1415 654 to 9       646/654
(98 %)
0 diff
(100 %id)
AL572447 placenta, Placenta Cot 25-normalized .m 781 to 1388 607 to 1   fully sequenced,   607/607
(100 %)
4 diff
(99.4 %id)
AJ844624   .m 876 to 1133 1 to 259       259/259
(100 %)
2 diff
(99.3 %id)
CR621718 Placenta Cot 25-normalized .m 916 to 1413 1 to 498       498/498
(100 %)
0 diff
(100 %id)
CN484494 eye .m 981 to 1421 457 to 17   fully sequenced, AAA   441/441
(100 %)
0 diff
(100 %id)
AU156722 placenta .m 1058 to 1415 358 to 1       358/360
(99 %)
3 diff
(99.2 %id)
GW492824 diffuse (Lauren) gastric adenocarcinoma, stomach .m 1253 to 1342 8 to 97       90/99
(90 %)
1 diff
(99.0 %id)
AI696411 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .m 1257 to 1416 160 to 1       160/160
(100 %)
0 diff
(100 %id)
AW029609 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .m 1300 to 1417 118 to 1       118/118
(100 %)
0 diff
(100 %id)
BG424747 Kidney, renal cell adenocarcinoma .n 1 to 677 1 to 679 exact tiling clone,   679/757
(89 %)
8 diff
(99.0 %id)
DA272545 caudate nucleus .o 1 to 569 2 to 569 H48L V49F H51M A52L G53V ... tiling clone, capped   568/568
(100 %)
1 diff
(99.9 %id)
DB055341 testis .o 10 to 565 2 to 558   tiling clone, capped   557/557
(100 %)
3 diff
(99.5 %id)
DA921596 small intestine .p 1 to 570 2 to 571 exact tiling clone, capped   570/570
(100 %)
0 diff
(100 %id)
AA430435 ovarian tumor, ovary .q 1 to 440 1 to 436   tiling clone,   436/436
(100 %)
7 diff
(98.4 %id)
TI_149311035   .q 217 to 1033 886 to 83 C2G S3G S4* tiling clone, AAA   804/952
(84 %)
18 diff
(98.2 %id)
BM977253 lung, Primary Lung Epithelial Cells .q 365 to 1033 687 to 19 C2R F5X tiling clone, AAA   669/669
(100 %)
1 diff
(99.9 %id)
DA382991 thalamus .r-u 1 to 555 2 to 558   tiling clone, capped   557/557
(100 %)
2 diff
(99.7 %id)
AL134415 brain .r-u 161 to 776 1 to 616   tiling clone,   616/616
(100 %)
1 diff
(99.9 %id)
BX387040 Placenta Cot 25-normalized .r-u 283 to 986 1 to 705   tiling clone,   705/709
(99 %)
4 diff
(99.5 %id)
CD625120   .r-u 320 to 689 1 to 370       370/388
(95 %)
2 diff
(99.5 %id)
BQ315948 colon .r-u 510 to 854 11 to 356       346/360
(96 %)
24 diff
(93.4 %id)
AW847128 colon .r-u 518 to 854 12 to 347       336/351
(95 %)
20 diff
(94.4 %id)
AW847186 colon .r-u 555 to 854 1 to 299       299/303
(98 %)
10 diff
(96.7 %id)
BX350034 Placenta Cot 25-normalized .r-u 594 to 1455 901 to 31 F128L G130W K131* tiling clone,   871/901
(96 %)
0 diff
(100 %id)
AW847181 colon .r-u 652 to 854 1 to 204       204/208
(98 %)
13 diff
(93.8 %id)
AW847152 colon .r-u 657 to 854 1 to 198       198/202
(98 %)
5 diff
(97.6 %id)
Z20320   .r-u 932 to 1116 1 to 182       182/185
(98 %)
5 diff
(97.3 %id)
AL080176 testis .r-u 1059 to 1962 1 to 904   tiling clone, available from DKFZ, AAA   904/904
(100 %)
1 diff
(99.9 %id)
BX355704 Placenta Cot 25-normalized .r-u 1350 to 1933 591 to 6       586/591
(99 %)
0 diff
(100 %id)
AI564334 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .r-u 1532 to 1966 436 to 2   tiling clone,   435/436
(99 %)
0 diff
(100 %id)
BI915776 brain .r-u 1749 to 1966 1 to 216   AAA   216/216
(100 %)
2 diff
(99.1 %id)
BI917650 brain .r-u 1749 to 1966 1 to 216   AAA   216/216
(100 %)
2 diff
(99.1 %id)
BJ996658 hepatoblastoma .s 1 to 436 2 to 437       437/437
(100 %)
0 diff
(100 %id)
DB102551 thymus .s 1 to 557 2 to 558 exact tiling clone, capped   557/557
(100 %)
0 diff
(100 %id)
CR620277 Placenta Cot 25-normalized .s 16 to 1655 1 to 1640 exact tiling clone,   1640/1640
(100 %)
0 diff
(100 %id)
AL545221 placenta, Placenta Cot 25-normalized .s 16 to 882 1 to 846 V114C D115W L116T W117S E118G ... fully sequenced,   846/846
(100 %)
23 diff
(97.3 %id)
BF737464 bladder_tumor .s 614 to 1024 410 to 2     Submitted on the opposite strand 409/410
(99 %)
0 diff
(100 %id)
AL571035 placenta, Placenta Cot 25-normalized .s 852 to 1655 799 to 1   fully sequenced,   799/799
(100 %)
25 diff
(96.9 %id)
BJ996659 hepatoblastoma .s 1247 to 1668 422 to 1   tiling clone,   422/422
(100 %)
1 diff
(99.8 %id)
TI_149311838   .t 1 to 747 829 to 85 E3N R4E R5A Q6A Q7T ... AAA   745/934
(79 %)
4 diff
(99.6 %id)
BM977595 lung, Primary Lung Cystic Fibrosis EpithelialCells .t 1 to 747 763 to 19 E3N R4E R5A Q6A Q7T ... tiling clone, AAA   745/746
(99 %)
4 diff
(99.5 %id)
TI_985974439   .u 1 to 863 1 to 850 Y2N R3* tiling clone,   794/858
(92 %)
34 diff
(96.1 %id)
DV080095 pooled .u 24 to 587 1 to 564   tiling clone,   508/564
(90 %)
11 diff
(98.1 %id)
DA011047 adrenal gland .va 1 to 539 2 to 540 exact capped   539/542
(99 %)
3 diff
(99.5 %id)
DA012904 adrenal gland .va 1 to 572 2 to 573 exact tiling clone, capped   572/572
(100 %)
2 diff
(99.7 %id)
DA837969 placenta .vb 1 to 549 2 to 550 exact tiling clone, capped   549/549
(100 %)
0 diff
(100 %id)
BG925488 cartilage .vc 1 to 578 76 to 653   tiling clone,   578/588
(98 %)
6 diff
(99.0 %id)
DA845462 placenta .vc 432 to 979 2 to 549 G73W tiling clone, capped   548/548
(100 %)
1 diff
(99.9 %id)
DA055201 cerebellum .vd 1 to 557 2 to 558 exact tiling clone, capped   557/559
(99 %)
1 diff
(99.9 %id)
DT932657 pooled .vd 181 to 375 1 to 195       195/368
(52 %)
6 diff
(98.4 %id)
DA552104   .ve 1 to 484 5 to 494 A60X S63L V65G Y66L V67R ... tiling clone, capped   493/495
(99 %)
7 diff
(98.6 %id)
CR625159 fetal brain .ve 124 to 2039 1 to 1916   tiling clone,   1916/1916
(100 %)
0 diff
(100 %id)
AL539000 brain, fetal brain .ve 124 to 1115 1 to 978   fully sequenced,   978/978
(100 %)
4 diff
(99.6 %id)
TI_57215608   .ve 127 to 992 31 to 895       865/895
(96 %)
15 diff
(98.4 %id)
BI753917 brain .ve 133 to 992 1 to 859       859/859
(100 %)
9 diff
(99.0 %id)
TI_57244058   .ve 168 to 961 28 to 828       801/845
(94 %)
24 diff
(97.2 %id)
BI914871 brain .ve 175 to 961 1 to 794       794/811
(97 %)
18 diff
(97.8 %id)
AL567611 brain, fetal brain .ve 1085 to 2037 940 to 1   fully sequenced,   940/940
(100 %)
8 diff
(99.2 %id)
DA133483 alzheimer cortex .vf 1 to 555 2 to 556 exact tiling clone, capped   555/555
(100 %)
0 diff
(100 %id)
DA254419 caudate nucleus .vf 27 to 584 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DA364631 subthalamic nucleus .vf 69 to 635 2 to 568   tiling clone, capped   567/567
(100 %)
1 diff
(99.9 %id)
AI929596 brain, frontal lobe .vf 109 to 563 1 to 455       455/455
(100 %)
0 diff
(100 %id)
DA288133 corpus callosum .vg 1 to 555 2 to 556 exact tiling clone, capped   555/555
(100 %)
0 diff
(100 %id)
DA523917 brain .vh 1 to 556 3 to 558   tiling clone, capped   557/557
(100 %)
0 diff
(100 %id)
DA105898 cerebellum .vh 445 to 995 2 to 552   tiling clone, capped   551/551
(100 %)
6 diff
(99.0 %id)
DA313476 hippocampus .vh 802 to 1336 2 to 536   tiling clone, capped   535/535
(100 %)
0 diff
(100 %id)
AK298654   .vi 1 to 930 2 to 931 exact tiling clone,   931/931
(100 %)
1 diff
(99.9 %id)
DC428620   .vi 1 to 562 2 to 563 exact     563/563
(100 %)
0 diff
(100 %id)
DC429305   .vi 1 to 584 2 to 585 exact     585/585
(100 %)
0 diff
(100 %id)
DC388181 small intestine .vi 1 to 570 2 to 571 exact     571/571
(100 %)
0 diff
(100 %id)
DC420504 uterus .vi 26 to 585 1 to 560       560/560
(100 %)
1 diff
(99.9 %id)
DA144400 amygdala .vj 1 to 448 2 to 449   tiling clone, capped   448/448
(100 %)
0 diff
(100 %id)
DA955598 Spleen .vj 115 to 688 2 to 576   tiling clone, capped   575/575
(100 %)
1 diff
(99.9 %id)
DB171197 kidney, tumor tissue .vk 1 to 590 3 to 592 exact tiling clone, capped   591/591
(100 %)
0 diff
(100 %id)
AJ844623   Gene TAGLN2_, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
CU446927 epidermis Gene TAGLN2_, variant not shown         Submitted on the opposite strand    
CR612954 fetal brain Gene TAGLN2_, variant not shown         Suspected internal deletion, this clone was ignored    
341 other accessions, mainly redundant or of lesser quality, also belong to this gene but are not reported.
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r-u, .s, .t, .u, .va, .vb, .vc, .vd, .ve, .vf, .vg, .vh, .vi, .vj, .vk Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI