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Gene LOC389168TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
21 supporting clones for gene LOC389168 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BC032749 Testis, embryonal carcinoma .a-u 1 to 1246 98 to 1341 G2S T20I S66N L122H tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base) 1244/1333
(93 %)
12 diff
(99.1 %id)
BE177338 head_neck .a-u 109 to 746 1 to 636       636/636
(100 %)
27 diff
(95.8 %id)
AU145097 whole embryo, mainly head .a-u 705 to 1246 541 to 1   tiling clone,   541/544
(99 %)
19 diff
(96.6 %id)
BG187095   .a-u 747 to 1066 1 to 317       317/317
(100 %)
10 diff
(96.9 %id)
AI092597 heart .a-u 766 to 1246 480 to 1       480/480
(100 %)
27 diff
(94.4 %id)
AA641186   .a-u 768 to 1244 477 to 1       477/515
(92 %)
22 diff
(95.8 %id)
AW071898 anaplastic oligodendroglioma, brain .a-u 1063 to 1628 597 to 32   tiling clone, AAA   566/573
(98 %)
0 diff
(100 %id)
DC426357.
matches multiple genes
  .a-u 1161 to 1633 474 to 3   tiling clone, also hits gene SET 472/478
(98 %)
0 diff
(100 %id)
AA099025.
matches multiple genes
  .b 1 to 598 1 to 595   tiling clone, also hits gene SET 595/618
(96 %)
15 diff
(97.6 %id)
AW375987 colon .b 147 to 472 329 to 1       329/370
(88 %)
0 diff
(100 %id)
TI_1948069796   .b 147 to 709 191 to 754   tiling clone,   564/1270
(44 %)
6 diff
(99.6 %id)
TI_1948070108   .b 147 to 841 194 to 886 G2S T20I S66N L122H N193T ... tiling clone,   693/1190
(58 %)
6 diff
(99.5 %id)
BX465176 neuroblastoma .b 147 to 911 389 to 1148 G2X D14X N18X T20X Y38X ... tiling clone,   760/1159
(65 %)
8 diff
(99.4 %id)
BI064245 uterus_tumor .b 163 to 470 1 to 308       308/308
(100 %)
7 diff
(97.8 %id)
GD136935   .b 281 to 624 351 to 8   AAA Submitted on the opposite strand 344/355
(96 %)
0 diff
(100 %id)
AW390843 stomach .b 340 to 703 364 to 1       364/378
(96 %)
15 diff
(96.1 %id)
AA738062 pooled germ cell tumors .b 349 to 739 393 to 2       392/439
(89 %)
0 diff
(100 %id)
BX441536.
matches multiple genes
brain, fetal brain .b 369 to 747 620 to 997     also hits gene kawnoybu 378/623
(60 %)
6 diff
(99.1 %id)
BE172728 head_neck .b 540 to 817 20 to 296       277/327
(84 %)
8 diff
(97.6 %id)
AW390103 stomach .b 592 to 754 1 to 165       165/165
(100 %)
13 diff
(92.2 %id)
BE164754 head_neck .b 602 to 802 20 to 218   tiling clone,   199/218
(91 %)
6 diff
(97.3 %id)
? Gene Summary Gene on genome mRNA:.a-u, .b Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C