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Gene SHISA2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
43 supporting clones for gene SHISA2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_001007538.1   .a 1 to 2889 1 to 2889 exact RefSeq,   2889/2889
(100 %)
0 diff
(100 %id)
AY358775   .a 30 to 1042 18 to 1030 exact tiling clone,   1013/1030
(98 %)
8 diff
(99.3 %id)
BC132898 Lung, PCR rescued clones .a 34 to 1051 1 to 1018 exact tiling clone,   1018/1018
(100 %)
0 diff
(100 %id)
BC137092 Testicle, PCR rescued clones .a 34 to 1051 1 to 1018 exact     1018/1018
(100 %)
0 diff
(100 %id)
TI_1752770110   .a 34 to 1051 50 to 1067 exact     1018/1276
(79 %)
8 diff
(99.4 %id)
TI_1752770118   .a 34 to 1051 1090 to 76 L22M     1015/1328
(76 %)
8 diff
(99.4 %id)
TI_1752771526   .a 34 to 877 859 to 16       844/1307
(64 %)
0 diff
(100 %id)
DN999942   .a 60 to 323 9 to 272       264/272
(97 %)
6 diff
(97.8 %id)
DN831328 pooled .a 110 to 504 395 to 1     Submitted on the opposite strand 395/395
(100 %)
2 diff
(99.5 %id)
DN831327 pooled .a 170 to 567 1 to 398       398/398
(100 %)
1 diff
(99.8 %id)
AA587314 larynx .a 606 to 1028 422 to 1       422/422
(100 %)
3 diff
(99.3 %id)
AA312568   .a 812 to 1028 1 to 217       217/217
(100 %)
0 diff
(100 %id)
AW962864   .a 813 to 1038 1 to 226       226/357
(63 %)
2 diff
(99.5 %id)
BE501619 malignant melanoma, metastatic to lymphnode, skin .a 1393 to 1882 1 to 490   tiling clone, Submitted on the opposite strand 490/490
(100 %)
2 diff
(99.6 %id)
BM997838 lung, Lung Focal Fibrosis .a 1551 to 2153 1 to 604   tiling clone, AAA Submitted on the opposite strand 604/604
(100 %)
5 diff
(99.2 %id)
BE165449 head_neck .a 1655 to 2260 11 to 614       604/614
(98 %)
6 diff
(99.1 %id)
BG171225 hypernephroma, cell line, Kidney .a 1842 to 2498 1 to 656       656/657
(99 %)
5 diff
(99.3 %id)
BU932700 mixed (pool of 40 RNAs) .a 1876 to 2693 1 to 819       819/819
(100 %)
9 diff
(99.0 %id)
CB132665 Liver .a 1909 to 2415 1 to 507       507/507
(100 %)
0 diff
(100 %id)
CB135007 Liver .a 1909 to 2389 1 to 481       481/481
(100 %)
0 diff
(100 %id)
CB955850 Pooled-Glandular .a 1999 to 2487 1 to 496       496/923
(53 %)
17 diff
(98.2 %id)
TI_149306439   .a 2017 to 2887 955 to 94   AAA   862/958
(89 %)
40 diff
(95.9 %id)
CX762973 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 2066 to 2738 673 to 1   tiling clone,   673/673
(100 %)
0 diff
(100 %id)
BG109100 Bone, osteosarcoma, cell line .a 2095 to 2811 1 to 712       712/884
(80 %)
12 diff
(98.7 %id)
FN121158 breast carcinoma .a 2143 to 2246 1 to 99       99/99
(100 %)
5 diff
(95.0 %id)
TI_154054859   .a 2176 to 2887 794 to 82   AAA   713/1013
(70 %)
3 diff
(99.8 %id)
TI_149280394   .a 2185 to 2887 794 to 93   AAA   702/702
(100 %)
2 diff
(99.8 %id)
BU686473 lung, Primary Lung Epithelial Cells .a 2199 to 2887 707 to 19   AAA   689/689
(100 %)
1 diff
(99.9 %id)
BU679183 lung, Primary Lung Epithelial Cells .a 2207 to 2887 699 to 19   AAA   681/681
(100 %)
1 diff
(99.9 %id)
CB115008 Liver .a 2227 to 2889 664 to 2   tiling clone, Submitted on the opposite strand 663/664
(99 %)
0 diff
(100 %id)
AW664964 pooled .a 2334 to 2887 565 to 12   AAA   554/554
(100 %)
1 diff
(99.9 %id)
BE464806 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .a 2356 to 2887 532 to 1       532/532
(100 %)
0 diff
(100 %id)
AA976712 carcinoid, lung .a 2424 to 2886 463 to 1       463/463
(100 %)
1 diff
(99.8 %id)
BE349943 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .a 2426 to 2889 468 to 5       464/468
(99 %)
0 diff
(100 %id)
BF196235 carcinoid, lung .a 2428 to 2889 464 to 2       463/464
(99 %)
0 diff
(100 %id)
AI694685 carcinoid, lung .a 2443 to 2886 444 to 1       444/444
(100 %)
3 diff
(99.4 %id)
AA983251 Kidney, kidney tumor .a 2455 to 2888 434 to 1       434/434
(100 %)
1 diff
(99.8 %id)
BM993116 lung, Metastatic Chondrosarcoma .a 2468 to 2887 437 to 19   AAA   419/419
(100 %)
2 diff
(99.6 %id)
BF110498 carcinoid, lung .a 2475 to 2889 416 to 2       415/416
(99 %)
0 diff
(100 %id)
BG644305 rhabdomyosarcoma .a 2519 to 2886 1 to 368       368/368
(100 %)
0 diff
(100 %id)
AW769715 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .a 2565 to 2889 331 to 7       325/331
(98 %)
0 diff
(100 %id)
FN115273 breast carcinoma .a 2735 to 2824 1 to 90       90/90
(100 %)
0 diff
(100 %id)
BE350279 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .a 2773 to 2889 120 to 4       117/120
(97 %)
0 diff
(100 %id)
? Gene Summary Gene on genome mRNA Expression Tissue Function, regulation, related genes C