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Gene RSPO4TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
23 supporting clones for gene RSPO4 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_001029871.3   .a 1 to 2703 5 to 2707 exact RefSeq, AAA   2707/2707
(100 %)
0 diff
(100 %id)
AK122609   .a 1 to 2703 2 to 2703 exact tiling clone, available from FLJ,   2703/2703
(100 %)
3 diff
(99.9 %id)
DA049602   .a 1 to 530 2 to 533   capped   532/550
(96 %)
2 diff
(99.7 %id)
DB296218   .a 2173 to 2703 534 to 1       534/535
(99 %)
5 diff
(99.1 %id)
DQ355152   .b 1 to 718 5 to 722 exact tiling clone,   722/722
(100 %)
0 diff
(100 %id)
NM_001040007.2   .b 1 to 2517 5 to 2521 exact RefSeq, AAA   2521/2521
(100 %)
0 diff
(100 %id)
BU508182 leiomyosarcoma, uterus .b 1165 to 2191 1 to 1042   tiling clone,   1042/1124
(92 %)
62 diff
(94.5 %id)
BM729141 eye, fetal eye .b 1417 to 1949 1 to 535   tiling clone, fully sequenced,   535/535
(100 %)
2 diff
(99.7 %id)
BM717748 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 1504 to 1718 1 to 215       215/215
(100 %)
0 diff
(100 %id)
BM706460 eye, eye anterior segment .b 1686 to 2169 7 to 490       484/497
(97 %)
8 diff
(98.4 %id)
BQ636829 eye, retina .b 1720 to 2163 1 to 444   tiling clone,   444/444
(100 %)
1 diff
(99.8 %id)
BM674941 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 1892 to 2516 642 to 19   AAA   624/624
(100 %)
2 diff
(99.7 %id)
BM682068 eye, fetal eye .b 1919 to 2516 613 to 19   fully sequenced, AAA   595/595
(100 %)
5 diff
(99.2 %id)
BM996047 lung, Metastatic Chondrosarcoma .b 1930 to 2517 606 to 19   tiling clone, AAA   588/588
(100 %)
1 diff
(99.9 %id)
BQ017185 lung, Metastatic Chondrosarcoma .b 1944 to 2516 591 to 19   AAA   573/573
(100 %)
0 diff
(100 %id)
AA417143   .b 2043 to 2517 1 to 472   fully sequenced,   472/472
(100 %)
2 diff
(99.6 %id)
BM728200 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 2054 to 2516 11 to 457   fully sequenced, AAA   447/457
(97 %)
17 diff
(96.3 %id)
BQ188163 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 2054 to 2285 1 to 232   fully sequenced,   232/232
(100 %)
3 diff
(98.8 %id)
AI811035 ovary, tumor, 5 pooled (see description) .b 2062 to 2517 456 to 1       456/456
(100 %)
0 diff
(100 %id)
BM681374 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 2094 to 2516 439 to 19   fully sequenced, AAA   421/421
(100 %)
2 diff
(99.6 %id)
AA992432   .b 2210 to 2520 310 to 1       310/310
(100 %)
4 diff
(98.8 %id)
AA813185   .b 2223 to 2520 310 to 12       299/310
(96 %)
0 diff
(100 %id)
BM673289 eye, eye anterior segment .b 2227 to 2516 308 to 19   AAA   290/290
(100 %)
0 diff
(100 %id)
BQ185331 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 2255 to 2517 281 to 19   fully sequenced, AAA   263/263
(100 %)
0 diff
(100 %id)
AA873081 2 pooled tumors (clear cell type), Kidney .b 2351 to 2520 169 to 1   tiling clone,   169/169
(100 %)
1 diff
(99.5 %id)
AA416863   .b 2356 to 2517 160 to 1   fully sequenced,   160/160
(100 %)
0 diff
(100 %id)
TI_813709313   .c 1 to 903 9 to 905 G7A L10V P54L Y56T F57S ... tiling clone, AAA   897/918
(97 %)
17 diff
(98.2 %id)
DN831835 pooled .c 40 to 704 1 to 666   tiling clone,   666/666
(100 %)
13 diff
(98.1 %id)
DN831834 pooled .c 297 to 883 587 to 2   tiling clone, Submitted on the opposite strand 586/587
(99 %)
10 diff
(98.3 %id)
BQ019277 lung, Metastatic Chondrosarcoma Gene RSPO4, variant not shown       AAA Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC