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Gene BEX5TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
38 supporting clones for gene BEX5 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BG716273 brain, hypothalamus .a 1 to 659 1 to 687 E2I N3G V4K P5L K6S ... tiling clone,   687/900
(76 %)
34 diff
(96.3 %id)
BC106955 PCR rescued clones .a 51 to 738 1 to 689 exact tiling clone,   689/689
(100 %)
2 diff
(99.8 %id)
NM_001012978.2   .a 51 to 868 1 to 818 exact RefSeq, AAA   818/818
(100 %)
0 diff
(100 %id)
DB458924.
matches multiple genes
testis .a 88 to 538 1 to 451     also hits gene speyda 451/451
(100 %)
1 diff
(99.8 %id)
BU535911 mixed (pool of 40 RNAs) .a 89 to 272 1 to 184       184/221
(83 %)
3 diff
(98.7 %id)
BI668791 brain, hypothalamus .a 97 to 769 1 to 685 E2G N3K V4L P5S K6P ...     685/685
(100 %)
34 diff
(95.1 %id)
DA095376 cerebellum .a 100 to 487 2 to 389   fully sequenced, capped   388/388
(100 %)
0 diff
(100 %id)
CN359818 embryonic stem cells, DMSO-treated H9 cellline .a 100 to 562 1 to 465       465/465
(100 %)
5 diff
(99.0 %id)
BC042818 Brain, hypothalamus .a 102 to 863 1 to 762 P42H available from MGC, AAA   762/762
(100 %)
2 diff
(99.8 %id)
DB495117 hypothalamus .a 102 to 585 1 to 484       484/484
(100 %)
2 diff
(99.6 %id)
TI_44345496   .a 102 to 769 90 to 769 E2G N3K V4L P5S K6P ...     680/769
(88 %)
36 diff
(95.4 %id)
AY833564   .a 103 to 868 1 to 766 exact tiling clone, AAA   766/766
(100 %)
0 diff
(100 %id)
DB490961 hypothalamus .a 116 to 532 1 to 419       419/419
(100 %)
4 diff
(99.1 %id)
BG714283 brain, hypothalamus .a 121 to 754 1 to 665 E2W N3K V4S P5V K6P ...     665/665
(100 %)
51 diff
(92.4 %id)
CK003246 brain/CNS, Human Brain - Cerebellar Cortex .a 128 to 783 1 to 649 E27G     649/654
(99 %)
10 diff
(98.5 %id)
BC092450 Brain, cerebellar cortex .a 131 to 857 1 to 727 E27G AAA   727/727
(100 %)
2 diff
(99.8 %id)
AI470929 Kidney .a 156 to 278 123 to 1       123/123
(100 %)
0 diff
(100 %id)
CA848959 Pancreas, Purified pancreatic islet .a 183 to 386 3 to 207   fully sequenced,   205/207
(99 %)
7 diff
(96.7 %id)
DN994028 brain, whole brain .a 300 to 863 9 to 571 E7K N8T V10L V11W E12R ... AAA   563/571
(98 %)
7 diff
(98.8 %id)
BQ027730 mixed .a 327 to 868 560 to 19   AAA   542/558
(97 %)
0 diff
(100 %id)
AV726956 hypothalamus .a 328 to 864 27 to 563       537/946
(56 %)
6 diff
(99.4 %id)
BM713290 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 338 to 868 1 to 531   AAA   531/531
(100 %)
0 diff
(100 %id)
CA844278 Pancreas, Purified pancreatic islet .a 356 to 862 507 to 1   fully sequenced,   507/507
(100 %)
0 diff
(100 %id)
BM988272 mixed .a 374 to 863 508 to 19   AAA   490/490
(100 %)
1 diff
(99.8 %id)
AA354138   .a 386 to 614 1 to 229       229/229
(100 %)
0 diff
(100 %id)
N51315 multiple sclerosis lesions .a 392 to 868 477 to 1       477/477
(100 %)
0 diff
(100 %id)
DB566162 hypothalamus .a 395 to 863 1 to 469     Submitted on the opposite strand 469/469
(100 %)
1 diff
(99.8 %id)
AI683675 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 408 to 863 456 to 1       456/456
(100 %)
0 diff
(100 %id)
N51240 multiple sclerosis lesions .a 409 to 868 467 to 1       467/472
(98 %)
9 diff
(98.1 %id)
AI761442 pooled .a 428 to 864 443 to 6       438/443
(98 %)
0 diff
(100 %id)
BX115509 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 432 to 863 446 to 15   AAA   432/432
(100 %)
0 diff
(100 %id)
DB537667 hippocampus .a 434 to 863 1 to 430     Submitted on the opposite strand 430/430
(100 %)
4 diff
(99.1 %id)
AI306423 2 pooled tumors (clear cell type), Kidney .a 440 to 869 433 to 4   tiling clone,   430/442
(97 %)
0 diff
(100 %id)
DB561305 hypothalamus .a 445 to 863 1 to 419     Submitted on the opposite strand 419/419
(100 %)
7 diff
(98.4 %id)
AI266173   .a 450 to 863 425 to 12   AAA   414/414
(100 %)
0 diff
(100 %id)
DB298649 cerebellum .a 457 to 868 412 to 1   fully sequenced,   412/412
(100 %)
0 diff
(100 %id)
AW168980 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 481 to 864 390 to 7       384/390
(98 %)
0 diff
(100 %id)
AA927419 pooled germ cell tumors .a 496 to 868 377 to 5       373/377
(98 %)
0 diff
(100 %id)
AI985090 Kidney .b 1 to 272 272 to 1 exact tiling clone,   272/272
(100 %)
0 diff
(100 %id)
NM_001159560.1   .b 1 to 860 1 to 860 exact RefSeq, AAA   860/860
(100 %)
0 diff
(100 %id)
? Gene Summary Gene on genome mRNA:.a, .b Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes