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Gene ZNF789TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
148 supporting clones for gene ZNF789 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BU594516 mixed (pool of 40 RNAs) .a 1 to 828 1 to 830   tiling clone,   830/831
(99 %)
23 diff
(97.3 %id)
NM_213603.2   .a 55 to 1657 1 to 1603 exact RefSeq, AAA   1603/1603
(100 %)
0 diff
(100 %id)
TI_57167307   .a 68 to 954 30 to 923       894/923
(96 %)
28 diff
(97.0 %id)
BM760052 lymph node, stomach .a 71 to 361 1 to 295       295/295
(100 %)
8 diff
(97.3 %id)
BI835214 pooled pancreas and spleen .a 72 to 954 1 to 890       890/890
(100 %)
22 diff
(97.6 %id)
BC089424 Lymph, normal germinal center B cells .a 93 to 1657 1 to 1565 T77A tiling clone, AAA   1565/1565
(100 %)
1 diff
(100.0 %id)
AW402750 lymph .a 93 to 481 8 to 396       389/396
(98 %)
6 diff
(98.5 %id)
TI_154139210   .a 93 to 675 80 to 662       583/583
(100 %)
5 diff
(99.2 %id)
AW575071 lymph .a 1137 to 1657 538 to 18   AAA   521/521
(100 %)
1 diff
(99.9 %id)
BM729341 eye, fetal eye .b-u 1 to 600 1 to 598   tiling clone, Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 598/598
(100 %)
2 diff
(99.7 %id)
AK131429 Spleen .b-u 194 to 3050 1 to 2856 Y176F V178L E179N H180I K181R ... tiling clone, available from FLJ,   2856/2856
(100 %)
23 diff
(99.2 %id)
DA941806 Spleen .b-u 195 to 794 2 to 602   capped   601/601
(100 %)
4 diff
(99.4 %id)
AA360703   .b-u 286 to 613 1 to 329       329/329
(100 %)
2 diff
(99.4 %id)
BG258837 embryonal carcinoma, cell line, testis .b-u 295 to 1072 1 to 770       770/786
(97 %)
13 diff
(98.4 %id)
BF761998 colon_est .b-u 417 to 1030 1 to 614       614/614
(100 %)
5 diff
(99.2 %id)
TI_149290842   .b-u 559 to 1363 892 to 102   tiling clone, AAA   791/947
(83 %)
17 diff
(98.3 %id)
AW803242 uterus .b-u 710 to 1173 1 to 463       463/463
(100 %)
11 diff
(97.7 %id)
BU681899 lung .b-u 717 to 1363 665 to 19   AAA   647/647
(100 %)
0 diff
(100 %id)
TI_154132491   .b-u 757 to 1361 745 to 130   AAA   616/879
(70 %)
18 diff
(98.0 %id)
EL952721 eyeball .b-u 764 to 1346 31 to 611       581/612
(94 %)
5 diff
(99.2 %id)
BX106455 2 pooled tumors (clear cell type), Kidney .b-u 820 to 1339 1 to 520       520/520
(100 %)
0 diff
(100 %id)
BU741860 eye, fetal eye .b-u 876 to 1540 683 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 665/665
(100 %)
0 diff
(100 %id)
AA664608 alveolar rhabdomyosarcoma .b-u 880 to 985 1 to 106       106/106
(100 %)
4 diff
(96.3 %id)
BM717468 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b-u 881 to 1497 1 to 617       617/617
(100 %)
0 diff
(100 %id)
AW449893   .b-u 904 to 1361 475 to 18   AAA   458/458
(100 %)
1 diff
(99.8 %id)
AI355709 lung .b-u 917 to 1372 460 to 5       456/460
(99 %)
0 diff
(100 %id)
AW169036 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .b-u 986 to 1367 390 to 7       384/390
(98 %)
0 diff
(100 %id)
BG942326 blood .b-u 1045 to 1366 357 to 36   AAA   322/322
(100 %)
3 diff
(99.1 %id)
AI383178   .b-u 1046 to 1193 148 to 1       148/148
(100 %)
0 diff
(100 %id)
DB333233 Spleen .b-u 2525 to 3050 526 to 1       526/526
(100 %)
0 diff
(100 %id)
AW515437 Kidney, renal cell tumor .b-u 2707 to 3056 351 to 2   tiling clone,   350/351
(99 %)
0 diff
(100 %id)
DC353460 brain .c 1 to 416 2 to 417   tiling clone,   417/572
(72 %)
6 diff
(99.0 %id)
TI_57183624   .c 58 to 882 34 to 864 D91A L92F E93R S94V Y95I ... tiling clone,   831/864
(96 %)
15 diff
(98.3 %id)
BI767175 pooled lung and spleen .c 59 to 882 1 to 830 D91A L92F E93R S94V Y95I ... tiling clone,   830/830
(100 %)
9 diff
(99.0 %id)
AX721104   .d 1 to 1018 1 to 1019 H189P K190* tiling clone,   1019/1019
(100 %)
2 diff
(99.9 %id)
CK004745 brain/CNS, Human Brain - Frontal Cortex .d 32 to 681 1 to 650       650/650
(100 %)
4 diff
(99.4 %id)
CB157176 Liver .d 187 to 852 1 to 666       666/666
(100 %)
0 diff
(100 %id)
BE174108 head_neck .e-u 1 to 296 8 to 302   tiling clone,   295/307
(96 %)
8 diff
(97.4 %id)
CB996106 placenta, pre-eclamptic placenta .e-u 23 to 577 28 to 582 exact tiling clone,   555/901
(61 %)
7 diff
(99.3 %id)
BG996656 head_neck .e-u 520 to 720 1 to 203   tiling clone,   203/203
(100 %)
8 diff
(96.1 %id)
CA427224 Bone, Subchondral Bone .e-u 605 to 1197 611 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (21/22 A in genome downstream of last aligned base) 593/593
(100 %)
0 diff
(100 %id)
BQ775440 Bone, Human Chondrosarcoma Cell Line .e-u 793 to 1197 423 to 19   AAA Possibly primed on the genome, locally A rich (21/22 A in genome downstream of last aligned base) 405/405
(100 %)
0 diff
(100 %id)
CA429032 Cell Line, Chondrosarcoma .e-u 793 to 1197 423 to 19   AAA Possibly primed on the genome, locally A rich (21/22 A in genome downstream of last aligned base) 405/405
(100 %)
0 diff
(100 %id)
BF205343 muscle, rhabdomyosarcoma .e-u 894 to 1613 1 to 711   tiling clone,   711/912
(77 %)
23 diff
(97.5 %id)
BG829003 muscle, rhabdomyosarcoma .e-u 894 to 1676 1 to 783   tiling clone,   783/913
(85 %)
11 diff
(98.8 %id)
AA804804 germinal center B cell .e-u 905 to 1197 314 to 22   AAA Possibly primed on the genome, locally A rich (21/22 A in genome downstream of last aligned base) 293/293
(100 %)
0 diff
(100 %id)
AK309467   .f 1 to 1054 2 to 1055 T70A tiling clone,   1055/1055
(100 %)
1 diff
(100.0 %id)
DC355484   .f 1 to 567 2 to 568       568/568
(100 %)
1 diff
(99.9 %id)
EL954758 eyeball .f 609 to 1115 1 to 508   tiling clone,   508/508
(100 %)
5 diff
(99.1 %id)
BC031249 testis .g 1 to 2990 2 to 2991 R2G tiling clone, available from MGC, AAA   2991/2991
(100 %)
1 diff
(100.0 %id)
BI464667 testis .g 1 to 742 7 to 748 R2G E81K G82V A83R G84E ... available from MGC,   743/748
(99 %)
21 diff
(97.2 %id)
BG026442 Bone, osteosarcoma, cell line .g 981 to 1550 1 to 579       579/1069
(54 %)
18 diff
(98.4 %id)
BF365521 nervous_tumor .g 1168 to 1723 580 to 24       557/580
(96 %)
0 diff
(100 %id)
BF823701 kidney_tumor .g 1280 to 1894 615 to 8     Submitted on the opposite strand 608/616
(98 %)
0 diff
(100 %id)
AI300479 carcinoid, lung .g 1328 to 1749 1 to 443     Submitted on the opposite strand 443/443
(100 %)
24 diff
(94.6 %id)
BE327207 carcinoid, lung .g 1338 to 1729 1 to 392     Submitted on the opposite strand 392/392
(100 %)
2 diff
(99.5 %id)
BM687258 eye, optic nerve .g 1396 to 1794 2 to 400       399/400
(99 %)
5 diff
(98.8 %id)
DB571996 hypothalamus .g 1500 to 1968 1 to 469     Submitted on the opposite strand 469/469
(100 %)
1 diff
(99.8 %id)
BF823534 kidney_tumor .g 1738 to 1918 188 to 12     Submitted on the opposite strand 177/188
(94 %)
0 diff
(100 %id)
BF823537 kidney_tumor .g 1738 to 1879 142 to 1     Submitted on the opposite strand 142/142
(100 %)
3 diff
(97.9 %id)
AA325459 brain, cerebellum .g 2434 to 2700 267 to 1     Submitted on the opposite strand 267/267
(100 %)
0 diff
(100 %id)
AL708039 human skeletal muscle .g 2461 to 3020 8 to 568       561/568
(98 %)
6 diff
(99.0 %id)
AA995624 2 pooled tumors (clear cell type), Kidney .g 2574 to 2993 421 to 3       419/421
(99 %)
0 diff
(100 %id)
AI183321 placenta .g 2624 to 2990 381 to 15   AAA   367/367
(100 %)
4 diff
(99.0 %id)
BU727609 eye, optic nerve .g 2652 to 2994 361 to 19   AAA   343/353
(97 %)
4 diff
(98.9 %id)
CB243214 Human Lung Epithelial cells, lung .g 2681 to 2990 323 to 17   AAA   307/332
(92 %)
3 diff
(99.1 %id)
AI243893 liver and spleen .g 2693 to 3025 1 to 333     Submitted on the opposite strand 333/333
(100 %)
0 diff
(100 %id)
CN359548 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .g 2814 to 2990 1 to 177   AAA   177/177
(100 %)
0 diff
(100 %id)
GD146941   .g 2830 to 2988 16 to 174   AAA   159/174
(91 %)
6 diff
(96.6 %id)
CN412354 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .h 1 to 484 1 to 484 exact tiling clone,   484/484
(100 %)
0 diff
(100 %id)
NM_001013258.1   .i 1 to 531 1 to 531 exact RefSeq, AAA   531/531
(100 %)
0 diff
(100 %id)
BM838714 lymph node, stomach .i 17 to 484 1 to 468 exact     468/468
(100 %)
4 diff
(99.2 %id)
BM840763 lymph node, stomach .i 17 to 534 1 to 518 exact     518/519
(99 %)
6 diff
(98.9 %id)
BM840293 lymph node, stomach .i 17 to 498 1 to 482 exact     482/482
(100 %)
4 diff
(99.2 %id)
BM841754 lymph node, stomach .i 17 to 447 1 to 431 exact     431/431
(100 %)
4 diff
(99.1 %id)
BM841470 lymph node, stomach .i 17 to 475 1 to 459 exact     459/459
(100 %)
5 diff
(99.0 %id)
BM841649 lymph node, stomach .i 17 to 518 1 to 502 exact     502/502
(100 %)
5 diff
(99.1 %id)
BM842096 lymph node, stomach .i 17 to 529 1 to 513 exact tiling clone, AAA   513/513
(100 %)
4 diff
(99.3 %id)
BM843828 lymph node, stomach .i 17 to 526 1 to 509 exact     509/509
(100 %)
5 diff
(99.1 %id)
BM845593 lymph node, stomach .i 17 to 520 1 to 504 exact     504/504
(100 %)
4 diff
(99.3 %id)
BM840512 lymph node, stomach .i 25 to 529 8 to 513   AAA   506/513
(98 %)
23 diff
(95.6 %id)
AI373827 uterus .i 65 to 529 464 to 1       464/464
(100 %)
1 diff
(99.8 %id)
BE502854 carcinoid, lung .i 69 to 528 460 to 1       460/460
(100 %)
0 diff
(100 %id)
AI692367 carcinoid, lung .i 91 to 528 437 to 1       437/437
(100 %)
5 diff
(98.9 %id)
AW139865   .i 112 to 529 435 to 18   AAA   418/418
(100 %)
0 diff
(100 %id)
BE044252 pooled .i 159 to 534 381 to 6       376/381
(98 %)
1 diff
(99.8 %id)
BC050286 testis .j 1 to 4250 1 to 4251 exact tiling clone, available from MGC, AAA   4251/4251
(100 %)
1 diff
(100.0 %id)
BI019287 marrow .j 217 to 600 45 to 428       384/428
(89 %)
9 diff
(97.9 %id)
DB089832 testis .j 952 to 1502 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
AW904387 nervous_normal .j 1530 to 1983 1 to 452       452/452
(100 %)
12 diff
(97.4 %id)
DB341337 testis .j 4267 to 4809 543 to 1   tiling clone,   543/543
(100 %)
1 diff
(99.9 %id)
BG957719 colon .j 4570 to 5090 1 to 520   tiling clone,   520/520
(100 %)
17 diff
(96.8 %id)
BE909619 epithelioid carcinoma, Pancreas .k 1 to 303 1 to 325   tiling clone,   301/363
(82 %)
18 diff
(95.1 %id)
BG996663 head_neck .k 120 to 309 1 to 189   tiling clone,   189/189
(100 %)
2 diff
(99.0 %id)
CB988329 Human Placenta, placenta .l 1 to 659 28 to 691 exact tiling clone,   665/778
(85 %)
13 diff
(98.4 %id)
AK093141 testis .l 2 to 1885 1 to 1884 exact tiling clone, available from FLJ,   1884/1884
(100 %)
1 diff
(100.0 %id)
AX747949   .l 2 to 1885 1 to 1884 exact     1884/1884
(100 %)
1 diff
(100.0 %id)
DB024673 testis .l 3 to 552 2 to 552 exact capped   551/551
(100 %)
1 diff
(99.9 %id)
BX504435   .l 21 to 721 1 to 703 exact     703/703
(100 %)
4 diff
(99.5 %id)
BX954520   .l 21 to 699 1 to 680 exact     680/680
(100 %)
3 diff
(99.6 %id)
BQ889954 brain, neuroblastoma, cell line .l 35 to 923 1 to 902 exact tiling clone,   902/904
(99 %)
17 diff
(98.2 %id)
DB336388 testis .l 1358 to 1885 529 to 1       529/529
(100 %)
1 diff
(99.9 %id)
BX498479 Liver .m-u 1 to 649 1 to 648 F31X F37X F49X tiling clone,   648/648
(100 %)
3 diff
(99.6 %id)
CN266676 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .m-u 118 to 748 1 to 631 exact tiling clone,   631/631
(100 %)
3 diff
(99.6 %id)
BE071880 breast .m-u 450 to 640 1 to 191       191/212
(90 %)
5 diff
(97.7 %id)
BF771424 epid_tumor .m-u 477 to 727 1 to 253       253/253
(100 %)
19 diff
(92.5 %id)
DA090434 cerebellum .m-u 479 to 1050 2 to 573   tiling clone, capped   572/572
(100 %)
0 diff
(100 %id)
BQ429088 testis .m-u 862 to 1462 1 to 602   tiling clone,   602/806
(74 %)
5 diff
(99.4 %id)
CB122613 Liver .n-u 1 to 602 5 to 606   tiling clone,   606/606
(100 %)
1 diff
(99.9 %id)
DA059162 cerebellum .n-u 1 to 554 2 to 558   capped   557/557
(100 %)
21 diff
(96.3 %id)
CN263419 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .n-u 54 to 511 1 to 458       458/458
(100 %)
6 diff
(98.7 %id)
BE780761 eye, retinoblastoma .n-u 270 to 1075 1 to 809 C19V T20L L21* tiling clone,   809/886
(91 %)
35 diff
(96.1 %id)
BG015581 placenta_normal .n-u 390 to 737 1 to 345       345/345
(100 %)
6 diff
(98.3 %id)
BF336194 colon .n-u 442 to 683 1 to 239       239/239
(100 %)
4 diff
(98.4 %id)
BF823595 kidney_tumor .n-u 455 to 716 1 to 262       262/262
(100 %)
3 diff
(98.9 %id)
AW274112 invasive adenocarcinoma, lung .n-u 538 to 971 457 to 24   tiling clone,   434/457
(94 %)
0 diff
(100 %id)
BG764587 melanotic melanoma, high MDR (cell line), skin .o 1 to 1017 5 to 846 E73K G74V A75R G76E M77C ... tiling clone, Suspected internal deletion 846/848
(99 %)
22 diff
(97.5 %id)
CB140921 Liver .p 1 to 676 6 to 681 exact tiling clone,   681/681
(100 %)
0 diff
(100 %id)
DA203481 brain .p 1 to 587 2 to 588 M47T capped   587/587
(100 %)
1 diff
(99.9 %id)
DA284580 corpus callosum .p 1 to 574 2 to 576 exact capped   575/575
(100 %)
1 diff
(99.9 %id)
DB500826 hypothalamus .p 4 to 492 1 to 489 M18X     489/489
(100 %)
3 diff
(99.4 %id)
DA344571 substantia nigra .p 24 to 596 2 to 574 exact capped   573/573
(100 %)
0 diff
(100 %id)
DB160740 thymus .p 56 to 624 2 to 570 exact capped   569/569
(100 %)
2 diff
(99.7 %id)
CD109212 brain, Pituitary .p 66 to 891 1 to 828 exact tiling clone,   828/836
(99 %)
9 diff
(99.0 %id)
CN335453 embryonic stem cells, DMSO-treated H9 cellline .q-u 1 to 545 1 to 545 exact tiling clone,   545/545
(100 %)
0 diff
(100 %id)
CN335451 embryonic stem cells, DMSO-treated H9 cellline .q-u 25 to 467 1 to 443       443/443
(100 %)
0 diff
(100 %id)
CR744966 germinal center B cell .q-u 91 to 769 1 to 680   tiling clone,   680/690
(98 %)
10 diff
(98.6 %id)
DR157559 human embryonic stem cells differentiated toan early endodermal cell type .r-u 1 to 710 1 to 710 exact tiling clone,   710/710
(100 %)
1 diff
(99.9 %id)
DA961463 Spleen .s 1 to 571 2 to 573 exact tiling clone, capped   572/572
(100 %)
4 diff
(99.4 %id)
AW998726 breast_normal .s 193 to 395 226 to 24     Submitted on the opposite strand 203/234
(86 %)
0 diff
(100 %id)
BF327121 breast_normal .s 193 to 413 240 to 20       221/248
(89 %)
0 diff
(100 %id)
DA196291 amygdala .t 1 to 555 2 to 556 exact tiling clone, capped   555/555
(100 %)
0 diff
(100 %id)
BM840607 lymph node, stomach .t 15 to 139 1 to 126       126/126
(100 %)
5 diff
(96.1 %id)
AW885385 ovary .t 93 to 461 376 to 7       370/393
(94 %)
4 diff
(99.0 %id)
AA992311   .t 325 to 451 127 to 1       127/127
(100 %)
4 diff
(96.9 %id)
AA834583 germinal center B cell .u 1 to 411 414 to 4 T26A tiling clone,   411/414
(99 %)
1 diff
(99.8 %id)
AA831937 germinal center B cell .u 25 to 411 390 to 4   tiling clone,   387/390
(99 %)
1 diff
(99.8 %id)
BE147798 head_neck Gene ZNF789, variant not shown         This clone was ignored    
BE706237 head_neck Gene ZNF789, variant not shown         This clone was ignored    
BF917763 uterus_tumor Gene ZNF789, variant not shown         Submitted on the opposite strand    
BQ378028 uterus Gene ZNF789, variant not shown         This clone was ignored    
BQ378042 uterus Gene ZNF789, variant not shown         This clone was ignored    
BX648360 human uterus endothel primary cell culture Gene ZNF789, variant not shown       available from DKFZ, AAA This clone was ignored    
CN335452 embryonic stem cells, DMSO-treated H9 cellline Gene ZNF789, variant not shown         This clone was ignored    
AL713063 human skeletal muscle Gene ZNF789, variant not shown         Suspected internal deletion, this clone was ignored    
AL603331 human skeletal muscle Gene ZNF789, variant not shown         This clone was ignored    
AA521495 germinal center B cell Gene ZNF789, variant not shown         This clone was ignored    
AA766143 germinal center B cell Gene ZNF789, variant not shown         This clone was ignored    
AI243418 pooled Gene ZNF789, variant not shown         Submitted on the opposite strand    
AW236821 pooled germ cell tumors Gene ZNF789, variant not shown         This clone was ignored    
BE045952 pooled germ cell tumors Gene ZNF789, variant not shown         This clone was ignored    
BG167146 hypernephroma, cell line, Kidney Gene ZNF789, variant not shown         This clone was ignored    
DA807831 brain Gene ZNF789, variant not shown       capped This clone was ignored    
DA953322 Spleen Gene ZNF789, variant not shown       capped This clone was ignored    
DB333879 Spleen Gene ZNF789, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b-u, .c, .d, .e-u, .f, .g, .h, .i, .j, .k, .l, .m-u, .n-u, .o, .p, .q-u, .r-u, .s, .t, .u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C