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Gene KCTD21TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
151 supporting clones for gene KCTD21 back to top
cDNA accession
Links to the sequence		 Tissue

most 5' clones
in red		 Match
mRNA		 From bp
to bp
in mRNA		 From bp
to bp
in accs.		 Clone encodes
complete protein
(with AA variation)		 Features Anomalies
detected by
AceView		 Accession
match over
(% length)		 Base differences
relative to genome
(% identity)
AK300320 placenta .a 207 to 1298 1 to 1092       1092/1092
(100 %)		 2 diff
(99.9 %id)
DC300428   .a 198 to 725 1 to 528       528/528
(100 %)		 1 diff
(99.9 %id)
AW996313 breast_normal .g 1 to 499 1 to 498 D4R R5Q P6H P7Q G8E ... tiling clone,   498/498
(100 %)		 4 diff
(99.2 %id)
BC036058 Brain, hypothalamus .a 205 to 3579 1 to 3375   tiling clone, available from MGC, AAA   3375/3375
(100 %)		 4 diff
(99.9 %id)
BE160245 head_neck .a 1068 to 1665 1 to 603       603/603
(100 %)		 6 diff
(99.1 %id)
BE179290 head_neck .a 2779 to 3413 644 to 9     Submitted on the opposite strand 636/644
(98 %)		 0 diff
(100 %id)
BE181157 head_neck .a 548 to 940 1 to 393       393/393
(100 %)		 2 diff
(99.5 %id)
BF351701 head_neck .a 1660 to 2185 1 to 525   tiling clone,   525/525
(100 %)		 4 diff
(99.3 %id)
BF772243 epid_tumor .a 1707 to 2006 1 to 297       297/297
(100 %)		 8 diff
(97.4 %id)
BF897453 marrow .b-u 922 to 1223 308 to 8     Submitted on the opposite strand 301/308
(97 %)		 0 diff
(100 %id)
BI063640 uterus_tumor .a 1750 to 2134 389 to 7       383/391
(97 %)		 0 diff
(100 %id)
DC307249 cerebellum .a 198 to 733 1 to 536       536/536
(100 %)		 1 diff
(99.9 %id)
DC307584 cerebellum .a 199 to 763 1 to 565       565/565
(100 %)		 0 diff
(100 %id)
DC307654 cerebellum .a 221 to 733 1 to 515       515/515
(100 %)		 2 diff
(99.7 %id)
DC307876 cerebellum .a 197 to 747 1 to 551       551/551
(100 %)		 2 diff
(99.7 %id)
DC309810 cerebellum .a 197 to 725 1 to 529       529/529
(100 %)		 2 diff
(99.7 %id)
DC309901 cerebellum .a 234 to 778 1 to 546       546/546
(100 %)		 2 diff
(99.7 %id)
DA122785 cerebellum .h-u 1 to 237 2 to 238 exact tiling clone, capped   237/237
(100 %)		 0 diff
(100 %id)
DC310410 cerebellum .a 198 to 733 1 to 536       536/536
(100 %)		 2 diff
(99.7 %id)
DC310648 cerebellum .a 198 to 783 1 to 586       586/586
(100 %)		 1 diff
(99.9 %id)
DC316181 amygdala .a 202 to 770 1 to 569       569/569
(100 %)		 0 diff
(100 %id)
DC316727 amygdala .a 207 to 765 1 to 559       559/559
(100 %)		 0 diff
(100 %id)
DC317403 amygdala .a 197 to 750 1 to 554       554/554
(100 %)		 1 diff
(99.9 %id)
DC318457 amygdala .a 198 to 743 1 to 546       546/546
(100 %)		 1 diff
(99.9 %id)
DC318492 amygdala .a 197 to 743 1 to 547       547/547
(100 %)		 0 diff
(100 %id)
DC320813 brain .a 199 to 722 1 to 524       524/524
(100 %)		 0 diff
(100 %id)
DC320996 brain .a 198 to 733 1 to 536       536/536
(100 %)		 1 diff
(99.9 %id)
DC321165 brain .a 197 to 729 1 to 533       533/533
(100 %)		 0 diff
(100 %id)
DC321446 brain .a 197 to 733 1 to 537       537/537
(100 %)		 1 diff
(99.9 %id)
DC321586 brain .a 198 to 743 1 to 546       546/546
(100 %)		 2 diff
(99.7 %id)
DC321707 brain .a 197 to 665 1 to 469       469/469
(100 %)		 3 diff
(99.4 %id)
DC322000 brain .a 197 to 752 1 to 556       556/556
(100 %)		 2 diff
(99.7 %id)
DC322007 brain .a 197 to 756 1 to 560       560/560
(100 %)		 0 diff
(100 %id)
DC322261 brain .a 198 to 756 1 to 559       559/559
(100 %)		 1 diff
(99.9 %id)
DC322655 brain .c 1 to 538 4 to 541 exact tiling clone,   541/541
(100 %)		 3 diff
(99.5 %id)
DC322819 brain .a 199 to 770 1 to 572       572/572
(100 %)		 1 diff
(99.9 %id)
DC323124 brain .a 198 to 765 1 to 568       568/568
(100 %)		 1 diff
(99.9 %id)
DC323826 brain .a 198 to 733 1 to 536       536/536
(100 %)		 1 diff
(99.9 %id)
DC324315 brain .a 197 to 789 1 to 593       593/593
(100 %)		 2 diff
(99.7 %id)
DC324316 brain .a 198 to 789 1 to 592       592/592
(100 %)		 3 diff
(99.5 %id)
DC324497 brain .a 197 to 694 1 to 498       498/498
(100 %)		 2 diff
(99.6 %id)
DC324762 brain .a 198 to 692 1 to 495       495/497
(99 %)		 2 diff
(99.6 %id)
DC325444 brain .a 197 to 793 1 to 597       597/597
(100 %)		 0 diff
(100 %id)
DC330324 hippocampus .a 197 to 761 1 to 565       565/565
(100 %)		 0 diff
(100 %id)
DC331597 hippocampus .a 1 to 568 1 to 568   tiling clone,   568/568
(100 %)		 0 diff
(100 %id)
DC332766 hippocampus .a 197 to 745 1 to 550       550/550
(100 %)		 3 diff
(99.5 %id)
DC333478 hippocampus .a 198 to 686 1 to 489       489/489
(100 %)		 1 diff
(99.8 %id)
DC336252 hippocampus .a 197 to 694 1 to 498       498/498
(100 %)		 0 diff
(100 %id)
DC336289 hippocampus .a 197 to 776 1 to 580       580/580
(100 %)		 2 diff
(99.7 %id)
DC341771 thalamus .a 198 to 743 1 to 546       546/546
(100 %)		 1 diff
(99.9 %id)
DC341838 thalamus .a 198 to 762 1 to 565       565/565
(100 %)		 1 diff
(99.9 %id)
DC341896 thalamus .a 202 to 768 18 to 584       567/567
(100 %)		 1 diff
(99.9 %id)
DC342068 thalamus .a 197 to 733 1 to 537       537/537
(100 %)		 0 diff
(100 %id)
DC342183 thalamus .a 194 to 768 1 to 575       575/575
(100 %)		 0 diff
(100 %id)
DC342587 thalamus .a 198 to 733 1 to 536       536/536
(100 %)		 1 diff
(99.9 %id)
DC342816 thalamus .a 198 to 694 1 to 498       498/498
(100 %)		 2 diff
(99.6 %id)
DC342851 thalamus .a 198 to 791 1 to 594       594/595
(99 %)		 2 diff
(99.7 %id)
DC343807 thalamus .a 198 to 772 1 to 575       575/575
(100 %)		 1 diff
(99.9 %id)
DC343880 thalamus .a 197 to 704 1 to 508       508/508
(100 %)		 0 diff
(100 %id)
DC343895 thalamus .a 197 to 737 1 to 541       541/541
(100 %)		 0 diff
(100 %id)
BX100067 ovary, tumor, 5 pooled (see description) .b-u 1270 to 1492 238 to 16   AAA   223/223
(100 %)		 3 diff
(98.7 %id)
BX114694 melanocyte .a 3258 to 3579 66 to 387   AAA   322/387
(83 %)		 6 diff
(98.5 %id)
CR619406 Placenta Cot 25-normalized .a 249 to 1775 1 to 1527   tiling clone,   1527/1527
(100 %)		 0 diff
(100 %id)
BX377479 Placenta Cot 25-normalized .a 1131 to 1775 628 to 1   fully sequenced,   628/628
(100 %)		 4 diff
(99.4 %id)
BX377480 Placenta Cot 25-normalized .a 249 to 1161 1 to 903   fully sequenced,   903/903
(100 %)		 10 diff
(98.9 %id)
DC345374 tongue, tumor tissue .d 1 to 726 1 to 727 exact tiling clone,   727/727
(100 %)		 1 diff
(99.9 %id)
DC425959 tongue, tumor tissue .d 3115 to 3535 423 to 1   tiling clone,   423/453
(93 %)		 6 diff
(98.7 %id)
DC345744 tongue, tumor tissue .a 195 to 785 1 to 591       591/591
(100 %)		 0 diff
(100 %id)
DC347548 tongue, tumor tissue .a 199 to 761 1 to 563       563/563
(100 %)		 1 diff
(99.9 %id)
DC347914 tongue, tumor tissue .a 196 to 733 1 to 538       538/538
(100 %)		 4 diff
(99.3 %id)
EC444505 Prostate .a 3285 to 3399 1 to 111       111/111
(100 %)		 5 diff
(95.5 %id)
R54118 whole brain .a 1912 to 2293 1 to 384       384/384
(100 %)		 7 diff
(98.2 %id)
T49309 placenta .a 3228 to 3584 369 to 1       369/437
(84 %)		 17 diff
(96.2 %id)
H24714 breast .a 3173 to 3590 439 to 9       431/442
(97 %)		 0 diff
(100 %id)
N20587 melanocyte .a 3296 to 3579 284 to 1   fully sequenced,   284/284
(100 %)		 0 diff
(100 %id)
N28979 melanocyte .a 3258 to 3564 63 to 373   fully sequenced,   311/373
(83 %)		 6 diff
(98.4 %id)
AA082617   .a 2526 to 3081 1 to 543       543/555
(97 %)		 19 diff
(96.6 %id)
AA082622   .a 2526 to 3034 1 to 498       498/498
(100 %)		 18 diff
(96.4 %id)
AA225583   .a 3269 to 3585 361 to 45       317/361
(87 %)		 0 diff
(100 %id)
AA225604   .a 3112 to 3443 1 to 336       336/345
(97 %)		 12 diff
(96.6 %id)
AI391633 B-cell, chronic lymphotic leukemia .a 3066 to 3583 525 to 8       518/525
(98 %)		 0 diff
(100 %id)
AI601267 colon .a 3190 to 3577 388 to 1       388/388
(100 %)		 4 diff
(99.0 %id)
AI567269 ovary, tumor, 5 pooled (see description) .b-u 1168 to 1492 351 to 27   AAA   325/325
(100 %)		 3 diff
(99.1 %id)
AI620540 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 3198 to 3579 382 to 1       382/382
(100 %)		 1 diff
(99.8 %id)
BE249874 adenocarcinoma cell line, colon .a 476 to 1362 1 to 876       876/930
(94 %)		 27 diff
(97.1 %id)
BE304977 adenocarcinoma cell line, colon .a 2869 to 3509 664 to 3       662/795
(83 %)		 0 diff
(100 %id)
BE467264 carcinoid, lung .a 3109 to 3580 472 to 1       472/472
(100 %)		 0 diff
(100 %id)
BE257480 eye, retinoblastoma .a 1810 to 2472 1 to 651       651/707
(92 %)		 22 diff
(96.9 %id)
BF061508 pooled .a 1454 to 1949 521 to 26       496/521
(95 %)		 0 diff
(100 %id)
BG032396 breast, mammary adenocarcinoma, cell line .a 2199 to 2521 1 to 321       321/321
(100 %)		 2 diff
(99.4 %id)
BG747338 adenocarcinoma cell line, colon .a 342 to 1245 1 to 907       907/907
(100 %)		 34 diff
(96.3 %id)
BI258376 cervical carcinoma cell line, cervix .a 2595 to 3463 1 to 872       872/876
(99 %)		 20 diff
(97.8 %id)
BI457894 brain, hypothalamus .a 200 to 941 1 to 742       742/742
(100 %)		 6 diff
(99.2 %id)
BM008320 Spleen .a 2533 to 3374 1 to 845       845/847
(99 %)		 14 diff
(98.4 %id)
BQ278795 adenocarcinoma, cell line, breast .a 247 to 1208 1 to 973       973/1017
(95 %)		 23 diff
(97.8 %id)
BQ029821 lung, Metastatic Chondrosarcoma .a 3067 to 3590 542 to 19   AAA   524/524
(100 %)		 1 diff
(99.9 %id)
BQ215741 epithelioid carcinoma, Pancreas .a 1203 to 1890 1 to 693       693/878
(78 %)		 12 diff
(98.7 %id)
BU159762 eye, retinoblastoma .a 2072 to 2963 11 to 911   tiling clone,   901/911
(98 %)		 6 diff
(99.4 %id)
TI_59383585   .a 2534 to 3374 142 to 985       844/846
(99 %)		 13 diff
(98.5 %id)
DA651592   .a 1874 to 2404 2 to 532   capped   531/531
(100 %)		 1 diff
(99.9 %id)
EB386636 eye, optic nerve .b-u 1 to 793 1 to 793   tiling clone,   793/793
(100 %)		 2 diff
(99.8 %id)
DC365012 esophagus .a 197 to 758 1 to 562       562/562
(100 %)		 2 diff
(99.7 %id)
DC429209   .a 197 to 792 1 to 596       596/596
(100 %)		 0 diff
(100 %id)
NM_001029859.1   .a 205 to 3579 1 to 3375   RefSeq, AAA   3375/3375
(100 %)		 4 diff
(99.9 %id)
DC369301   .a 197 to 757 1 to 561       561/561
(100 %)		 2 diff
(99.7 %id)
DC369380   .a 198 to 760 1 to 563       563/563
(100 %)		 1 diff
(99.9 %id)
DC369509   .f 1 to 558 1 to 558 exact tiling clone,   558/558
(100 %)		 1 diff
(99.9 %id)
DC369532   .a 197 to 760 1 to 570       570/570
(100 %)		 6 diff
(99.0 %id)
DC426298   .a 3033 to 3590 559 to 1   tiling clone,   559/559
(100 %)		 1 diff
(99.9 %id)
DC369826   .a 196 to 757 1 to 562       562/562
(100 %)		 3 diff
(99.5 %id)
DC369845   .e 1 to 559 2 to 560 exact tiling clone,   560/560
(100 %)		 1 diff
(99.9 %id)
DC369882   .a 199 to 758 1 to 560       560/560
(100 %)		 0 diff
(100 %id)
DC370481   .e 1 to 543 2 to 544 exact     544/544
(100 %)		 1 diff
(99.9 %id)
DC372072   .a 199 to 739 1 to 541       541/541
(100 %)		 1 diff
(99.9 %id)
DC372081   .a 199 to 724 1 to 526       526/526
(100 %)		 0 diff
(100 %id)
DC373195 tongue .a 725 to 1288 1 to 564       564/564
(100 %)		 2 diff
(99.7 %id)
DC373996 brain .a 199 to 760 1 to 562       562/562
(100 %)		 0 diff
(100 %id)
DC374234 brain .a 200 to 728 1 to 529       529/529
(100 %)		 0 diff
(100 %id)
DC374321 brain .a 202 to 743 8 to 549       542/542
(100 %)		 2 diff
(99.7 %id)
DC376539 brain .a 199 to 733 1 to 537       537/537
(100 %)		 2 diff
(99.7 %id)
DC377096 brain .a 196 to 700 1 to 505       505/505
(100 %)		 2 diff
(99.7 %id)
DC377184 brain .a 198 to 743 1 to 546       546/546
(100 %)		 1 diff
(99.9 %id)
DC377191 brain .a 198 to 747 1 to 550       550/550
(100 %)		 1 diff
(99.9 %id)
DC377275 brain .a 198 to 746 1 to 549       549/549
(100 %)		 1 diff
(99.9 %id)
DC377495 brain .a 207 to 743 1 to 537       537/537
(100 %)		 0 diff
(100 %id)
DC377875 brain .a 199 to 811 1 to 613       613/613
(100 %)		 1 diff
(99.9 %id)
DC377897 brain .a 197 to 796 1 to 600       600/600
(100 %)		 2 diff
(99.7 %id)
DC381685 placenta .a 207 to 789 1 to 583       583/583
(100 %)		 1 diff
(99.9 %id)
DC382563 placenta .a 198 to 752 1 to 555       555/555
(100 %)		 1 diff
(99.9 %id)
DC382581 placenta .a 197 to 769 1 to 575       575/575
(100 %)		 2 diff
(99.7 %id)
BM817719 stomach .a 198 to 500 1 to 303       303/303
(100 %)		 1 diff
(99.7 %id)
DC386598   .a 199 to 772 1 to 574       574/574
(100 %)		 0 diff
(100 %id)
DC391011 Spleen .a 196 to 743 1 to 548       548/548
(100 %)		 3 diff
(99.5 %id)
DC294863 synovial membrane tissue from rheumatioidarthritis .a 198 to 653 1 to 456       456/476
(95 %)		 3 diff
(99.4 %id)
DC296003 synovial membrane tissue from rheumatioidarthritis .a 204 to 742 1 to 539       539/539
(100 %)		 0 diff
(100 %id)
DR001932 fetal brain .a 211 to 897 1 to 686       686/686
(100 %)		 6 diff
(99.2 %id)
DC401177 testis .a 198 to 733 1 to 537       537/537
(100 %)		 2 diff
(99.7 %id)
DC403338 testis .a 198 to 758 1 to 561       561/561
(100 %)		 2 diff
(99.7 %id)
DC403774 testis .a 198 to 755 1 to 558       558/558
(100 %)		 1 diff
(99.9 %id)
DC407876 thymus .a 198 to 688 1 to 491       491/491
(100 %)		 1 diff
(99.8 %id)
DC408333 thymus .a 197 to 738 1 to 545       545/545
(100 %)		 6 diff
(98.9 %id)
DC408871 thymus .a 198 to 740 1 to 543       543/543
(100 %)		 1 diff
(99.9 %id)
DC412668 kidney, tumor tissue .a 199 to 755 1 to 558       558/558
(100 %)		 1 diff
(99.9 %id)
DC412717 kidney, tumor tissue .a 194 to 757 1 to 564       564/564
(100 %)		 1 diff
(99.9 %id)
DC415684 trachea .a 198 to 751 1 to 554       554/554
(100 %)		 3 diff
(99.5 %id)
DC416389 trachea .a 197 to 760 1 to 564       564/564
(100 %)		 2 diff
(99.7 %id)
DC418659 trachea .a 199 to 789 1 to 591       591/591
(100 %)		 1 diff
(99.9 %id)
BM669303 eye, lens .a 1348 to 1810 480 to 19   fully sequenced, AAA   462/462
(100 %)		 0 diff
(100 %id)
BM717262 eye, lens .a 657 to 1378 1 to 722   fully sequenced,   722/722
(100 %)		 0 diff
(100 %id)
BM683840 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 3409 to 3579 187 to 17   fully sequenced, AAA   171/171
(100 %)		 0 diff
(100 %id)
BM930381 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 3274 to 3579 1 to 307   fully sequenced, AAA   307/307
(100 %)		 1 diff
(99.7 %id)
BQ574028 Chondrosarcoma Grade II, Left Pelvis .b-u 783 to 1492 720 to 19   tiling clone, AAA   702/759
(92 %)		 8 diff
(99.0 %id)
DC423295 uterus .a 198 to 740 1 to 543       543/543
(100 %)		 1 diff
(99.9 %id)
AK095233 tongue, tumor tissue .a 198 to 758 1 to 561   available from FLJ, Suspected internal deletion, this clone was ignored 561/561
(100 %)		 2 diff
(99.7 %id)
DA433411 tongue, tumor tissue .a 198 to 755 1 to 558   capped Suspected internal deletion, this clone was ignored 558/558
(100 %)		 1 diff
(99.9 %id)
BE745576 adenocarcinoma cell line, ovary .a 198 to 688 1 to 491     Suspected internal deletion, this clone was ignored 491/491
(100 %)		 1 diff
(99.8 %id)
DA780224 brain .a 197 to 738 1 to 545   capped Suspected internal deletion, this clone was ignored 545/545
(100 %)		 6 diff
(98.9 %id)
DC408871 thymus .a 198 to 740 1 to 543       543/543
(100 %)		 1 diff
(99.9 %id)
DC412668 kidney, tumor tissue .a 199 to 755 1 to 558       558/558
(100 %)		 1 diff
(99.9 %id)
DC412717 kidney, tumor tissue .a 194 to 757 1 to 564       564/564
(100 %)		 1 diff
(99.9 %id)
DC415684 trachea .a 198 to 751 1 to 554       554/554
(100 %)		 3 diff
(99.5 %id)
DC416389 trachea .a 197 to 760 1 to 564       564/564
(100 %)		 2 diff
(99.7 %id)
DC418659 trachea .a 199 to 789 1 to 591       591/591
(100 %)		 1 diff
(99.9 %id)
BM669303 eye, lens .a 1348 to 1810 480 to 19   fully sequenced, AAA   462/462
(100 %)		 0 diff
(100 %id)
BM669303 eye, lens .a 1348 to 1810 480 to 19   fully sequenced, AAA   462/462
(100 %)		 0 diff
(100 %id)
BM717262 eye, lens .a 657 to 1378 1 to 722   fully sequenced,   722/722
(100 %)		 0 diff
(100 %id)
BM717262 eye, lens .a 657 to 1378 1 to 722   fully sequenced,   722/722
(100 %)		 0 diff
(100 %id)
BM683840 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 3409 to 3579 187 to 17   fully sequenced, AAA   171/171
(100 %)		 0 diff
(100 %id)
BM683840 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 3409 to 3579 187 to 17   fully sequenced, AAA   171/171
(100 %)		 0 diff
(100 %id)
BM930381 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 3274 to 3579 1 to 307   fully sequenced, AAA   307/307
(100 %)		 1 diff
(99.7 %id)
BM930381 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 3274 to 3579 1 to 307   fully sequenced, AAA   307/307
(100 %)		 1 diff
(99.7 %id)
BQ574028 Chondrosarcoma Grade II, Left Pelvis .b-u 783 to 1492 720 to 19   tiling clone, AAA   702/759
(92 %)		 8 diff
(99.0 %id)
BQ574028 Chondrosarcoma Grade II, Left Pelvis .b-u 783 to 1492 720 to 19   tiling clone, AAA   702/759
(92 %)		 8 diff
(99.0 %id)
DC423295 uterus .a 198 to 740 1 to 543       543/543
(100 %)		 1 diff
(99.9 %id)
? Gene Summary Gene on genome mRNA:.a, .b-u, .c, .d, .e, .f, .g, .h-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C