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Gene SAMD14TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
150 supporting clones for gene SAMD14 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
CN369613 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 1 to 692 1 to 690   tiling clone,   690/694
(99 %)
6 diff
(99.2 %id)
DA804002 brain .a 32 to 572 2 to 542   capped   541/541
(100 %)
1 diff
(99.9 %id)
DA080665 cerebellum .a 42 to 387 2 to 353   capped   352/352
(100 %)
3 diff
(99.2 %id)
DA127974 cerebellum .a 42 to 632 2 to 592   capped   591/591
(100 %)
1 diff
(99.9 %id)
DA122517 cerebellum .a 45 to 504 2 to 461   capped   460/460
(100 %)
0 diff
(100 %id)
DA786805 brain .a 49 to 583 2 to 537   capped   536/536
(100 %)
3 diff
(99.5 %id)
DA069948 cerebellum .a 53 to 533 2 to 481   capped   480/481
(99 %)
2 diff
(99.6 %id)
DA299784 hippocampus .a 53 to 533 2 to 483   capped   482/482
(100 %)
3 diff
(99.4 %id)
DA757358   .a 55 to 614 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA794288 brain .a 55 to 519 2 to 466   capped   465/465
(100 %)
1 diff
(99.8 %id)
DA725913   .a 59 to 541 2 to 484   capped   483/483
(100 %)
0 diff
(100 %id)
DA127647 cerebellum .a 61 to 648 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DA911595   .a 61 to 610 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA783498 brain .a 65 to 617 2 to 556   capped   555/555
(100 %)
5 diff
(99.1 %id)
DA796108 brain .a 65 to 533 2 to 470   capped   469/469
(100 %)
1 diff
(99.8 %id)
AY148482 brain .a 82 to 1939 1 to 1858 exact tiling clone, AAA   1858/1858
(100 %)
0 diff
(100 %id)
NM_174920.2   .a 82 to 1939 1 to 1858 exact RefSeq, AAA   1858/1858
(100 %)
0 diff
(100 %id)
BM721479 eye, fetal eye .b 1 to 426 1 to 428   tiling clone,   428/428
(100 %)
2 diff
(99.6 %id)
BC141822 Donated clones,Novartis FGA collection .b 5 to 1797 1 to 1793 exact AAA   1793/1793
(100 %)
1 diff
(100.0 %id)
DA299905 hippocampus .b 13 to 470 2 to 459   capped   458/458
(100 %)
0 diff
(100 %id)
DA460095 tongue, tumor tissue .b 13 to 571 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
BM547145 brain, hippocampus .b 13 to 840 21 to 854       834/1114
(74 %)
34 diff
(97.0 %id)
AK094209 cerebellum .b 14 to 3153 1 to 3140 exact tiling clone, available from FLJ,   3140/3140
(100 %)
5 diff
(99.9 %id)
AK225767 brain .b 14 to 1673 1 to 1660 exact     1660/1660
(100 %)
0 diff
(100 %id)
DA031517   .b 15 to 457 2 to 444   capped   443/447
(99 %)
1 diff
(99.8 %id)
DA054500 cerebellum .b 15 to 572 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA062003 cerebellum .b 15 to 577 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA086716 cerebellum .b 15 to 512 2 to 499   capped   498/498
(100 %)
0 diff
(100 %id)
DA100734 cerebellum .b 15 to 580 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DA115844 cerebellum .b 15 to 584 2 to 574   capped   573/573
(100 %)
4 diff
(99.4 %id)
DA121172 cerebellum .b 15 to 250 2 to 238   capped   237/237
(100 %)
1 diff
(99.6 %id)
DA124487 cerebellum .b 15 to 470 2 to 457   capped   456/456
(100 %)
0 diff
(100 %id)
DA127141 cerebellum .b 15 to 607 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
DA501847 brain .b 15 to 567 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
DA741698   .b 15 to 530 2 to 517   capped   516/516
(100 %)
0 diff
(100 %id)
DA759990   .b 15 to 559 2 to 547   capped   546/546
(100 %)
1 diff
(99.9 %id)
DA777840 brain .b 15 to 573 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA085063 cerebellum .b 17 to 574 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA114840 cerebellum .b 17 to 593 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
DA118199 cerebellum .b 17 to 562 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DA538541 Kidney .b 17 to 585 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA726972   .b 17 to 350 2 to 335   capped   334/334
(100 %)
0 diff
(100 %id)
AK291482 brain .b 18 to 1647 1 to 1630 P116S P177L     1630/1630
(100 %)
2 diff
(99.9 %id)
DA106211 cerebellum .b 19 to 572 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA124410 cerebellum .b 19 to 493 2 to 478   capped   477/477
(100 %)
3 diff
(99.4 %id)
DA125304 cerebellum .b 19 to 381 2 to 364   capped   363/363
(100 %)
1 diff
(99.8 %id)
DA495242 brain .b 19 to 587 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA501667 brain .b 19 to 587 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA810323 brain .b 19 to 567 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA073729 cerebellum .b 21 to 586 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA780809 brain .b 21 to 592 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA693530   .b 23 to 586 2 to 566   capped   565/565
(100 %)
3 diff
(99.5 %id)
BC136485 Testicle, PCR rescued clones .b 32 to 1770 1 to 1739 exact     1714/1739
(98 %)
19 diff
(99.0 %id)
TI_1971558249   .b 32 to 861 247 to 1064     Submitted on the opposite strand 818/1207
(67 %)
24 diff
(98.1 %id)
TI_1971558319   .b 32 to 936 910 to 6       905/1223
(73 %)
5 diff
(99.6 %id)
BQ068296 brain .b 32 to 699 20 to 692       673/1050
(64 %)
20 diff
(98.1 %id)
DA104959 cerebellum .b 41 to 604 2 to 568   capped   567/567
(100 %)
3 diff
(99.5 %id)
DA490073 brain .b 44 to 600 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
BC142728 Donated clones,Novartis FGA collection .b 48 to 1797 1 to 1750 exact AAA   1750/1750
(100 %)
0 diff
(100 %id)
DA772687 brain .b 48 to 631 2 to 586   capped   585/585
(100 %)
1 diff
(99.9 %id)
DA120631 cerebellum .b 50 to 568 2 to 521   capped   520/520
(100 %)
1 diff
(99.9 %id)
DA070034 cerebellum .b 51 to 530 2 to 481   capped   480/480
(100 %)
0 diff
(100 %id)
DA088363 cerebellum .b 55 to 514 2 to 462   capped   461/461
(100 %)
4 diff
(99.2 %id)
DA113736 cerebellum .b 55 to 605 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
DA085317 cerebellum .b 58 to 634 2 to 580   capped   579/582
(99 %)
4 diff
(99.4 %id)
DA782163 brain .b 59 to 565 2 to 508   capped   507/507
(100 %)
1 diff
(99.9 %id)
DA070433 cerebellum .b 65 to 586 2 to 523   capped   522/522
(100 %)
1 diff
(99.9 %id)
DA205813 brain .b 73 to 461 2 to 390   capped   389/389
(100 %)
0 diff
(100 %id)
DA115855 cerebellum .b 74 to 586 2 to 516   capped   515/515
(100 %)
2 diff
(99.7 %id)
DA123062 cerebellum .b 74 to 636 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA387351 thalamus .b 74 to 634 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DA100148 cerebellum .b 76 to 608 2 to 534   capped   533/533
(100 %)
0 diff
(100 %id)
DA104412 cerebellum .b 80 to 625 2 to 549   capped   548/548
(100 %)
2 diff
(99.7 %id)
DA105228 cerebellum .b 80 to 630 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
CN369612 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 86 to 408 1 to 324       324/324
(100 %)
6 diff
(98.2 %id)
DA114302 cerebellum .b 257 to 728 2 to 473   capped   472/472
(100 %)
1 diff
(99.8 %id)
DA779538 brain .b 388 to 792 2 to 406   capped   405/405
(100 %)
0 diff
(100 %id)
DA272893 caudate nucleus .b 415 to 929 2 to 516   capped   515/515
(100 %)
0 diff
(100 %id)
AK095809 brain .b 644 to 3149 1 to 2506   tiling clone, available from FLJ,   2506/2506
(100 %)
7 diff
(99.8 %id)
DA530714 brain .b 645 to 1010 2 to 367   capped   366/366
(100 %)
1 diff
(99.8 %id)
BP426228 small intestine .b 807 to 1082 1 to 276     Submitted on the opposite strand 276/276
(100 %)
0 diff
(100 %id)
TI_57198280   .b 832 to 1572 28 to 777       750/777
(96 %)
29 diff
(96.3 %id)
BC029872 Brain, Lung, Testis, adult, pooled whole .b 833 to 1797 1 to 965   available from MGC, AAA   965/965
(100 %)
0 diff
(100 %id)
BI819887 pooled brain, lung, testis .b 833 to 1572 1 to 749   available from MGC,   749/749
(100 %)
25 diff
(96.7 %id)
CD579688 brain .b 894 to 1564 1 to 668       668/668
(100 %)
17 diff
(97.5 %id)
BQ434391 leiomyosarcoma, uterus .b 952 to 1701 1 to 761       761/836
(91 %)
17 diff
(98.0 %id)
DA502983 brain .b 1051 to 1612 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
BG683960 brain, neuroblastoma, cell line .b 1092 to 1748 667 to 8       660/667
(98 %)
0 diff
(100 %id)
DA782463 brain .b 1105 to 1684 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
BX327589 Neuroblastoma Cot 25-normalized .b 1180 to 2095 1 to 916       916/916
(100 %)
20 diff
(97.9 %id)
BM677123 eye, fetal eye .b 1246 to 1797 573 to 19   AAA   555/555
(100 %)
3 diff
(99.5 %id)
Z44395 brain, total brain .b 1352 to 1634 1 to 282       282/282
(100 %)
7 diff
(97.6 %id)
BG338375 leiomyosarcoma cell line, uterus .b 1463 to 2147 1 to 678   tiling clone,   678/684
(99 %)
14 diff
(98.0 %id)
CV813519 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .b 1531 to 2345 1 to 823       823/877
(93 %)
17 diff
(98.1 %id)
BU507225 leiomyosarcoma, uterus .b 1581 to 1797 33 to 249   AAA   217/249
(87 %)
6 diff
(97.6 %id)
R46247 whole brain .b 1605 to 1797 207 to 14   AAA   194/194
(100 %)
3 diff
(98.5 %id)
BM926862 brain .b 1649 to 2306 1 to 662       662/1358
(48 %)
17 diff
(98.8 %id)
BX371380 Neuroblastoma Cot 25-normalized .b 1666 to 2503 853 to 5       849/925
(91 %)
0 diff
(100 %id)
AA583682 Kidney, kidney tumor .b 1676 to 1797 133 to 13   AAA   121/121
(100 %)
1 diff
(99.2 %id)
CX869416 embryonic stem .b 1722 to 2371 1 to 650       650/650
(100 %)
1 diff
(99.9 %id)
CX869338 embryonic stem .b 2482 to 3153 697 to 26   AAA   672/672
(100 %)
7 diff
(99.0 %id)
DB317675 brain .b 2585 to 3149 565 to 1       565/565
(100 %)
2 diff
(99.7 %id)
Z40324 brain, total brain .b 2938 to 3153 216 to 1       216/216
(100 %)
1 diff
(99.6 %id)
CR592493 Neuroblastoma Cot 25-normalized .c 1 to 2705 1 to 2705 exact tiling clone,   2705/2705
(100 %)
0 diff
(100 %id)
AL523123 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .c 1 to 992 1 to 981       981/993
(98 %)
14 diff
(98.6 %id)
AL134452 brain .d 1 to 599 1 to 595   tiling clone,   595/595
(100 %)
4 diff
(99.4 %id)
AL134453 brain .d 1963 to 2532 588 to 19   tiling clone, AAA   570/570
(100 %)
2 diff
(99.7 %id)
TI_44349125   .e 1 to 633 78 to 710       633/711
(89 %)
7 diff
(99.1 %id)
BI560888 testis .e 4 to 633 1 to 630   available from MGC,   630/631
(99 %)
5 diff
(99.3 %id)
BC047081 testis .e 8 to 2875 1 to 2869 exact tiling clone, available from MGC, AAA   2869/2869
(100 %)
5 diff
(99.9 %id)
DB098116 testis .e 16 to 604 2 to 590   tiling clone, capped   589/589
(100 %)
0 diff
(100 %id)
AF035306 brain .e 823 to 2875 34 to 2086   tiling clone, AAA   2053/2086
(98 %)
8 diff
(99.7 %id)
T77111 whole brain .e 857 to 1029 21 to 189       172/189
(91 %)
7 diff
(96.3 %id)
BG911806 anaplastic oligodendroglioma with 1p/19qloss, brain .e 1543 to 2275 1 to 742       742/893
(83 %)
30 diff
(96.7 %id)
AA325509 brain, cerebellum .e 1710 to 2069 1 to 360       360/360
(100 %)
0 diff
(100 %id)
AA322252 brain, cerebellum .e 1790 to 1994 1 to 205       205/206
(99 %)
1 diff
(99.6 %id)
AL523122 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .e 1938 to 2820 902 to 30       873/943
(92 %)
0 diff
(100 %id)
BM710994 eye, fetal eyes .e 2034 to 2483 1 to 450   fully sequenced,   450/450
(100 %)
0 diff
(100 %id)
TI_149290394   .e 2084 to 2875 873 to 95   AAA   779/788
(98 %)
22 diff
(97.3 %id)
BF527787 anaplastic oligodendroglioma with 1p/19qloss, brain .e 2099 to 2874 1 to 763   AAA   763/763
(100 %)
23 diff
(97.0 %id)
CN314125 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .e 2285 to 2827 1 to 542       542/542
(100 %)
2 diff
(99.7 %id)
BM973393 lung .e 2299 to 2875 595 to 19   tiling clone, AAA   577/577
(100 %)
3 diff
(99.5 %id)
AI393094 B-cell, chronic lymphotic leukemia .e 2398 to 2870 473 to 1       473/473
(100 %)
2 diff
(99.6 %id)
AI742481 pooled .e 2399 to 2870 487 to 16   AAA   472/472
(100 %)
9 diff
(98.1 %id)
C15329   .e 2405 to 2830 1 to 420       420/420
(100 %)
6 diff
(98.6 %id)
BM666085 eye, fetal eyes .e 2453 to 2875 439 to 17   fully sequenced, AAA   423/423
(100 %)
2 diff
(99.6 %id)
BM719863 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .e 2460 to 2875 1 to 416   AAA   416/416
(100 %)
1 diff
(99.8 %id)
BM718030 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .e 2460 to 2875 1 to 416   AAA   416/416
(100 %)
1 diff
(99.8 %id)
BX113543 whole brain .e 2469 to 2875 420 to 15   AAA   406/406
(100 %)
2 diff
(99.6 %id)
R38282 whole brain .e 2524 to 2875 364 to 12   AAA   353/353
(100 %)
6 diff
(98.4 %id)
F26380 pectoral muscle (after mastectomy) .e 2575 to 2874 1 to 300       300/300
(100 %)
2 diff
(99.4 %id)
AI701263 adenocarcinoma, Pancreas .e 2670 to 2873 203 to 1       203/203
(100 %)
3 diff
(98.6 %id)
AW135853   .e 2682 to 2870 206 to 18   AAA   189/189
(100 %)
0 diff
(100 %id)
T03645   .e 2712 to 2870 159 to 1       159/161
(98 %)
4 diff
(97.6 %id)
AA723992 parathyroid gland, parathyroid tumor .e 2717 to 2870 152 to 1       152/152
(100 %)
2 diff
(98.7 %id)
BI820994 pooled brain, lung, testis .f 1 to 756 1 to 774 A29C V30C P31A E32R T33D ... tiling clone,   774/977
(79 %)
36 diff
(96.4 %id)
TI_57198465   .f 1 to 756 25 to 798 A29C V30C P31A E32R T33D ...     774/1001
(77 %)
45 diff
(95.6 %id)
BF513632   .g-u 1 to 523 17 to 539   tiling clone, Submitted on the opposite strand 523/539
(97 %)
6 diff
(98.9 %id)
AK054843 cerebellum .g-u 50 to 2405 1 to 2356 exact tiling clone, available from FLJ,   2356/2356
(100 %)
0 diff
(100 %id)
DA056505 cerebellum .g-u 51 to 632 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DA785928 brain .g-u 189 to 707 2 to 521   capped   520/520
(100 %)
1 diff
(99.9 %id)
BQ354743 head_neck .g-u 1433 to 1850 430 to 6       425/449
(94 %)
0 diff
(100 %id)
DB296629 cerebellum .g-u 1868 to 2405 537 to 1       537/537
(100 %)
1 diff
(99.9 %id)
DA205380 brain .h 1 to 551 6 to 558   capped   557/557
(100 %)
2 diff
(99.7 %id)
DA446597 tongue, tumor tissue .h 1 to 565 4 to 568 exact tiling clone, capped   567/567
(100 %)
0 diff
(100 %id)
DA123632 cerebellum .h 39 to 565 2 to 528 exact capped   527/527
(100 %)
0 diff
(100 %id)
DA504523 brain .i 1 to 503 6 to 508   tiling clone, capped   507/507
(100 %)
0 diff
(100 %id)
DA122482 cerebellum .j 1 to 550 2 to 552   tiling clone, capped   551/551
(100 %)
1 diff
(99.9 %id)
BY798577 eye .j 35 to 644 1 to 610 exact tiling clone,   610/610
(100 %)
0 diff
(100 %id)
DA119933 cerebellum .k 1 to 557 4 to 560 exact tiling clone, capped   559/559
(100 %)
0 diff
(100 %id)
DB298776 cerebellum Gene SAMD14, variant not shown         This clone was ignored    
DA096903 cerebellum Gene SAMD14, variant not shown       capped This clone was ignored    
DA172934 amygdala Gene SAMD14, variant not shown       capped This clone was ignored    
DA492893 brain Gene SAMD14, variant not shown       capped Suspected internal deletion, this clone was ignored    
AI300907 2 pooled tumors (clear cell type), Kidney Gene SAMD14, variant not shown         Suspected internal deletion, this clone was ignored    
AI636681 pooled germ cell tumors Gene SAMD14, variant not shown         This clone was ignored    
AW590118 pooled germ cell tumors Gene SAMD14, variant not shown         This clone was ignored    
BF507768   Gene SAMD14, variant not shown       AAA This clone was ignored    
DA796429 brain Gene SAMD14, variant not shown       capped Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g-u, .h, .i, .j, .k Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C