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Gene C1orf69TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
98 supporting clones for gene C1orf69 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
CN285775 embryonic stem cells, cell lines H1, H7, andH9 .a 1 to 407 1 to 407   tiling clone,   407/407
(100 %)
1 diff
(99.8 %id)
NM_001010867.2   .a 1 to 7903 1 to 7903 exact RefSeq, AAA   7903/7903
(100 %)
0 diff
(100 %id)
BG248098 adenocarcinoma cell line, colon .a 87 to 859 1 to 763       763/766
(99 %)
13 diff
(98.4 %id)
BG386259 adenocarcinoma cell line, colon .a 87 to 883 1 to 796       796/877
(90 %)
36 diff
(95.9 %id)
BC028052 Placenta, choriocarcinoma .a 89 to 338 12 to 261   available from MGC,   250/250
(100 %)
0 diff
(100 %id)
BG325548 Kidney, renal cell adenocarcinoma .a 90 to 785 1 to 707       707/707
(100 %)
36 diff
(95.0 %id)
BI086735 cervix .a 90 to 336 1 to 248   available from MGC,   248/248
(100 %)
3 diff
(98.8 %id)
BG421070 Kidney, renal cell adenocarcinoma .a 97 to 901 1 to 795       795/1025
(77 %)
41 diff
(96.0 %id)
DN831582 pooled .a 326 to 635 310 to 1     Submitted on the opposite strand 310/310
(100 %)
0 diff
(100 %id)
AW978541   .a 333 to 1065 1 to 734   tiling clone,   734/734
(100 %)
9 diff
(98.8 %id)
AI038116 parathyroid gland, parathyroid tumor .a 339 to 765 1 to 427     Submitted on the opposite strand 427/427
(100 %)
2 diff
(99.6 %id)
BI820993 pooled brain, lung, testis .a 340 to 1102 1 to 763   tiling clone,   763/768
(99 %)
7 diff
(99.1 %id)
TI_57198464   .a 340 to 1102 32 to 794       763/799
(95 %)
11 diff
(98.7 %id)
DN831581 pooled .a 364 to 788 1 to 428       428/428
(100 %)
7 diff
(98.4 %id)
AW044301 thymus, pooled .a 379 to 1082 1 to 704     Submitted on the opposite strand 704/704
(100 %)
7 diff
(99.1 %id)
DA115464 cerebellum .a 408 to 953 2 to 547   capped   546/546
(100 %)
1 diff
(99.9 %id)
DA609148   .a 408 to 953 2 to 548   capped   547/551
(99 %)
3 diff
(99.5 %id)
BI767882 pooled lung and spleen .a 417 to 1155 1 to 754       733/754
(97 %)
19 diff
(97.5 %id)
DB056622 testis .a 418 to 938 2 to 525   capped   524/524
(100 %)
3 diff
(99.5 %id)
BG696942 skin .a 791 to 1540 1 to 761   tiling clone,   761/763
(99 %)
20 diff
(97.4 %id)
BM048834 carcinoma, cell line, Prostate .a 901 to 1683 1 to 784       784/846
(92 %)
11 diff
(98.7 %id)
BX378101 Placenta Cot 25-normalized .a 1066 to 2013 949 to 2       948/949
(99 %)
0 diff
(100 %id)
BG697277 skin .a 1082 to 1973 1 to 888       888/889
(99 %)
12 diff
(98.7 %id)
BX348276 Placenta Cot 25-normalized .a 1175 to 1994 1 to 818   tiling clone,   818/853
(95 %)
11 diff
(98.8 %id)
TI_149310244   .a 1266 to 2028 845 to 93   AAA   753/931
(80 %)
14 diff
(98.5 %id)
BU688568 lung .a 1333 to 2028 714 to 19   AAA   696/699
(99 %)
2 diff
(99.8 %id)
AW881784 ovary .a 1457 to 1665 1 to 209       209/210
(99 %)
9 diff
(95.8 %id)
CB240803 Human Lung Epithelial cells, lung .a 1460 to 2028 588 to 19   AAA   570/570
(100 %)
1 diff
(99.9 %id)
DR158049 human embryonic stem cells differentiated toan early endodermal cell type .a 1544 to 2029 490 to 5     Submitted on the opposite strand 486/490
(99 %)
0 diff
(100 %id)
BQ023708 placenta .a 1555 to 2028 491 to 19   AAA   473/473
(100 %)
1 diff
(99.8 %id)
AW104050 ovary, tumor, 5 pooled (see description) .a 1558 to 2029 473 to 2       472/473
(99 %)
0 diff
(100 %id)
BQ023080 placenta .a 1568 to 2028 479 to 19   AAA   461/461
(100 %)
0 diff
(100 %id)
AA738352 pooled germ cell tumors .a 1644 to 2028 401 to 20   AAA   382/382
(100 %)
3 diff
(99.3 %id)
BM549285 melanotic melanoma, skin .a 1668 to 2028 1 to 361   AAA   361/361
(100 %)
1 diff
(99.8 %id)
AI953035 pooled germ cell tumors .a 1676 to 2028 364 to 12   AAA   353/353
(100 %)
0 diff
(100 %id)
BF592160 Kidney .a 1685 to 2030 346 to 1       346/346
(100 %)
1 diff
(99.8 %id)
BG471870 eye, retinoblastoma .a 1694 to 2182 1 to 491   tiling clone,   491/794
(61 %)
24 diff
(97.0 %id)
AI341184 pooled germ cell tumors .a 1712 to 2028 328 to 12   AAA   317/317
(100 %)
1 diff
(99.7 %id)
AA995803 2 pooled tumors (clear cell type), Kidney .a 1747 to 2027 285 to 6       280/285
(98 %)
0 diff
(100 %id)
AA911220 pooled .a 1775 to 2029 257 to 5       253/257
(98 %)
0 diff
(100 %id)
BG329561 eye, retinoblastoma .a 2445 to 3120 1 to 677   tiling clone,   677/1068
(63 %)
17 diff
(98.5 %id)
BI000519 head_normal .a 3267 to 3548 1 to 279   tiling clone,   279/279
(100 %)
5 diff
(98.3 %id)
DA811119 brain .a 3311 to 3836 2 to 527   tiling clone, capped   526/526
(100 %)
0 diff
(100 %id)
DR761181 embryonic stem .a 3365 to 3681 1 to 318       318/493
(64 %)
3 diff
(99.4 %id)
DR761339 embryonic stem .a 3365 to 3826 1 to 462       462/462
(100 %)
0 diff
(100 %id)
BQ213585 embryonal carcinoma, cell line, testis .a 3441 to 4212 1 to 774   tiling clone,   774/895
(86 %)
14 diff
(98.5 %id)
BG001350 placenta_normal .a 3481 to 3805 13 to 338       326/343
(95 %)
8 diff
(97.7 %id)
AW814717 stomach .a 3608 to 3865 267 to 10       258/274
(94 %)
0 diff
(100 %id)
AA738230 pooled germ cell tumors .a 3630 to 4090 1 to 460     Submitted on the opposite strand 460/460
(100 %)
3 diff
(99.4 %id)
AI285709 esophagus, squamous cell carcinoma .a 3821 to 4232 413 to 2   tiling clone,   412/413
(99 %)
0 diff
(100 %id)
DA612516   .a 4377 to 4953 2 to 578   tiling clone, capped   577/577
(100 %)
2 diff
(99.7 %id)
BF740119 brain, glioblastoma (pooled) .a 4524 to 5009 488 to 1       488/488
(100 %)
3 diff
(99.4 %id)
AI868541 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 4687 to 5016 330 to 1       330/330
(100 %)
1 diff
(99.7 %id)
AI215698 carcinoid, lung .a 4753 to 5147 1 to 395   tiling clone, Submitted on the opposite strand 395/395
(100 %)
1 diff
(99.8 %id)
R45745   .a 4945 to 5307 360 to 1   tiling clone,   360/383
(93 %)
7 diff
(98.2 %id)
DB320127   .a 5249 to 5802 554 to 1   tiling clone,   554/554
(100 %)
8 diff
(98.6 %id)
CV804385 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 6052 to 6729 1 to 684   tiling clone,   684/716
(95 %)
28 diff
(96.1 %id)
DA563149 heart .a 6225 to 6717 2 to 493   capped   492/492
(100 %)
10 diff
(98.0 %id)
CD103263 Pooled-Skin .a 6231 to 6946 1 to 725   tiling clone,   725/751
(96 %)
35 diff
(95.4 %id)
AK023911 thyroid gland .a 6302 to 7505 1 to 1205   tiling clone, available from FLJ,   1205/1947
(61 %)
7 diff
(99.7 %id)
AU141590 thyroid gland .a 6303 to 7007 2 to 707   capped   706/709
(99 %)
5 diff
(99.3 %id)
BF875593 lung_tumor .a 6485 to 6852 76 to 443       368/443
(83 %)
6 diff
(98.7 %id)
R92426 liver and spleen .a 6490 to 6820 1 to 337     Submitted on the opposite strand 337/337
(100 %)
11 diff
(96.8 %id)
BX090892   .a 6528 to 6933 1 to 406   AAA   406/406
(100 %)
1 diff
(99.8 %id)
AA442490   .a 6528 to 6920 1 to 393   fully sequenced,   393/393
(100 %)
1 diff
(99.8 %id)
AA436686   .a 6685 to 6937 253 to 1   fully sequenced,   253/253
(100 %)
2 diff
(99.3 %id)
BM790412 Ascites, stomach .a 7066 to 7623 1 to 558       558/558
(100 %)
4 diff
(99.3 %id)
BG827113 muscle, rhabdomyosarcoma .a 7198 to 7856 1 to 658       658/658
(100 %)
2 diff
(99.7 %id)
TI_149277387   .a 7230 to 7903 767 to 97   AAA   671/671
(100 %)
7 diff
(99.0 %id)
CA425016 cell lines, Chondrosarcoma .a 7230 to 7903 693 to 19   tiling clone, AAA   675/675
(100 %)
2 diff
(99.8 %id)
BU677635 lung .a 7251 to 7903 668 to 19   AAA   650/650
(100 %)
7 diff
(99.0 %id)
AW243177 Kidney .a 7368 to 7904 533 to 1   tiling clone,   533/533
(100 %)
7 diff
(98.7 %id)
DB327396 brain .a 7379 to 7903 521 to 1       521/521
(100 %)
6 diff
(98.9 %id)
BX112704 ovary, tumor, 5 pooled (see description) .a 7451 to 7903 468 to 15   AAA   454/454
(100 %)
1 diff
(99.8 %id)
AI290485 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 7495 to 7903 423 to 19   AAA   405/405
(100 %)
8 diff
(98.1 %id)
BI053853 placenta_normal .a 7540 to 7708 5 to 169       165/169
(97 %)
8 diff
(95.3 %id)
AI269217 Kidney .a 7576 to 7902 323 to 1       323/323
(100 %)
6 diff
(98.2 %id)
AI284791 ovary, tumor, 5 pooled (see description) .a 7603 to 7903 300 to 1       300/300
(100 %)
1 diff
(99.7 %id)
AI309568 2 pooled tumors (clear cell type), Kidney .a 7603 to 7903 317 to 17   AAA   301/301
(100 %)
1 diff
(99.7 %id)
AK022796   .b 1 to 3977 1 to 3975 T58R C59H P60A T61P L62R ... tiling clone, available from FLJ,   3975/3975
(100 %)
11 diff
(99.8 %id)
AK303837 ovary, tumor tissue .c 1 to 853 1 to 853 G117S tiling clone,   853/853
(100 %)
1 diff
(99.9 %id)
DC413633 ovary, tumor tissue .c 1 to 557 1 to 562       562/562
(100 %)
8 diff
(98.6 %id)
TI_57196809   .c 36 to 780 44 to 807       739/813
(90 %)
23 diff
(97.2 %id)
BI824636 pooled brain, lung, testis .c 40 to 780 1 to 760       735/766
(95 %)
17 diff
(97.8 %id)
AA831498 germinal center B cell .c 59 to 435 1 to 377     Submitted on the opposite strand 377/377
(100 %)
2 diff
(99.5 %id)
CR615475 Placenta Cot 25-normalized .c 61 to 1644 1 to 1584   tiling clone,   1584/1584
(100 %)
0 diff
(100 %id)
AL583557 brain, fetal brain .c 61 to 1026 1 to 957       957/1011
(94 %)
15 diff
(98.6 %id)
BX378102 Placenta Cot 25-normalized .c 61 to 928 1 to 866       866/872
(99 %)
2 diff
(99.8 %id)
BM549690 leukocyte .c 61 to 970 34 to 954       921/1039
(88 %)
23 diff
(97.8 %id)
TI_57183972   .c 61 to 786 92 to 832       720/832
(86 %)
24 diff
(97.2 %id)
CN360212 embryonic stem cells, DMSO-treated H9 cellline .c 122 to 809 1 to 689       689/689
(100 %)
8 diff
(98.9 %id)
BM746407 stomach .c 150 to 504 1 to 355       355/355
(100 %)
5 diff
(98.6 %id)
BU168166 hepatocellular carcinoma, cell line, Liver .c 258 to 1067 24 to 843       820/1131
(72 %)
30 diff
(97.4 %id)
BQ647940 hepatocellular carcinoma, cell line, Liver .c 258 to 1027 21 to 796       776/997
(77 %)
23 diff
(97.7 %id)
BI252345 hepatocellular carcinoma, cell line, Liver .c 259 to 798 1 to 540       540/540
(100 %)
2 diff
(99.7 %id)
BI253017 hepatocellular carcinoma, cell line, Liver .c 857 to 1597 775 to 20       756/776
(97 %)
0 diff
(100 %id)
AA321939 brain, cerebellum Gene C1orf69, variant not shown              
AI033816 liver and spleen Gene C1orf69, variant not shown         Suspected internal deletion, this clone was ignored    
AI890327 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus Gene C1orf69, variant not shown              
BQ930404 sciatic nerve Gene C1orf69, variant not shown         Suspected internal deletion, this clone was ignored    
AU149671   Gene C1orf69, variant not shown         This clone was ignored    
AU126911   Gene C1orf69, variant not shown       capped This clone was ignored    
DB071811 testis Gene C1orf69, variant not shown       capped This clone was ignored    
DB340257 testis Gene C1orf69, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C