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Gene TMEM213TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
35 supporting clones for gene TMEM213 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DN996543 breast cancer, Mammary gland (cancer tissue) .a 1 to 651 1 to 651 V2R D3G S64T tiling clone,   651/651
(100 %)
9 diff
(98.7 %id)
BC131697 PCR rescued clones .b 1 to 1157 1 to 1157 exact tiling clone,   1157/1157
(100 %)
3 diff
(99.8 %id)
CR736714 2 pooled tumors (clear cell type), Kidney .c 1 to 480 1 to 480 K66N tiling clone,   480/480
(100 %)
1 diff
(99.8 %id)
AK055841 Kidney .d 1 to 2594 2 to 2594 K57N tiling clone, available from FLJ,   2594/2594
(100 %)
7 diff
(99.8 %id)
NM_001085429.1   .d 1 to 3387 2 to 3388 exact RefSeq, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 3388/3388
(100 %)
0 diff
(100 %id)
DA626421 Kidney .d 1 to 510 2 to 511 K57N capped   510/510
(100 %)
1 diff
(99.9 %id)
BC058028 Kidney .d 9 to 1144 1 to 1136 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 1136/1136
(100 %)
5 diff
(99.6 %id)
BG399538 Kidney .d 12 to 662 1 to 679 H22T A23C A24S P25R P26L ...     677/679
(99 %)
47 diff
(93.1 %id)
BG401569 Kidney .d 12 to 723 1 to 706 E101G P102A L103S V104G P105S ... available from MGC,   706/721
(97 %)
16 diff
(97.8 %id)
DA635766 Kidney .d 14 to 590 2 to 578 K57N capped   577/577
(100 %)
1 diff
(99.9 %id)
DB198568 trachea .d 59 to 526 2 to 469   capped   468/468
(100 %)
1 diff
(99.8 %id)
AK055760 Kidney .d 518 to 2310 1 to 1799   tiling clone, available from FLJ,   1799/1799
(100 %)
9 diff
(99.5 %id)
DA621574 Kidney .d 519 to 1071 2 to 558   capped   557/557
(100 %)
6 diff
(99.0 %id)
DA622364 Kidney .d 850 to 1380 2 to 534   capped   533/533
(100 %)
3 diff
(99.5 %id)
BI041753 nervous_tumor .d 1369 to 1906 1 to 538       538/538
(100 %)
0 diff
(100 %id)
BI041929 nervous_tumor .d 1369 to 1683 1 to 315       315/315
(100 %)
4 diff
(98.8 %id)
DB320457 Kidney .d 1764 to 2310 548 to 1       548/548
(100 %)
1 diff
(99.9 %id)
DB320414 Kidney .d 1775 to 2310 536 to 1       536/536
(100 %)
0 diff
(100 %id)
DB320655 Kidney .d 2069 to 2594 528 to 1       528/528
(100 %)
5 diff
(99.1 %id)
AI245830 Kidney .d 2112 to 2594 484 to 1       484/484
(100 %)
6 diff
(98.8 %id)
AW295005   .d 2112 to 2594 501 to 18   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 484/484
(100 %)
4 diff
(99.2 %id)
AI991407 Kidney .d 2206 to 2595 390 to 1       390/390
(100 %)
5 diff
(98.8 %id)
AW299705 Kidney .d 2234 to 2594 362 to 1       362/362
(100 %)
5 diff
(98.7 %id)
AW467103 2 pooled tumors (clear cell type), Kidney .d 2237 to 2597 362 to 1       362/362
(100 %)
6 diff
(98.4 %id)
AW195031 Kidney .d 2274 to 2594 322 to 1       322/322
(100 %)
4 diff
(98.8 %id)
AI769774 2 pooled tumors (clear cell type), Kidney .d 2289 to 2759 471 to 1   tiling clone,   471/471
(100 %)
7 diff
(98.6 %id)
AI766749 2 pooled tumors (clear cell type), Kidney .d 2330 to 2581 281 to 29   tiling clone, AAA   253/266
(95 %)
4 diff
(98.5 %id)
AW771283 Kidney .d 2610 to 2967 362 to 1   tiling clone,   362/370
(97 %)
7 diff
(98.2 %id)
AI672404 Kidney .d 2956 to 3387 444 to 11   tiling clone, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 434/434
(100 %)
1 diff
(99.8 %id)
BQ318950 colon .e-u 1 to 331 18 to 345 P2S E8R S9V C10L S11L ... tiling clone,   328/391
(83 %)
5 diff
(98.8 %id)
DA631245 Kidney .f 1 to 560 2 to 561 exact tiling clone, capped   560/575
(97 %)
5 diff
(99.2 %id)
AI792934 Kidney .f 299 to 690 1 to 393   tiling clone,   393/499
(78 %)
6 diff
(98.8 %id)
AA974952 Kidney .f 1787 to 2096 310 to 2   tiling clone,   309/454
(68 %)
0 diff
(100 %id)
AA969483 2 pooled tumors (clear cell type), Kidney .g-u 1 to 259 270 to 13 K13N R16G tiling clone, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 258/286
(90 %)
4 diff
(98.7 %id)
AA995874 Kidney .g-u 6 to 259 264 to 12   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 253/365
(69 %)
4 diff
(99.0 %id)
AI733593 Kidney .g-u 6 to 259 265 to 12   tiling clone, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 254/463
(54 %)
0 diff
(100 %id)
BF351955 head_neck .g-u 109 to 234 1 to 126       126/126
(100 %)
4 diff
(96.9 %id)
AI765724 2 pooled tumors (clear cell type), Kidney Gene TMEM213, variant not shown         This clone was ignored    
CB240620 Human Lung Epithelial cells, lung Gene TMEM213, variant not shown       AAA This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e-u, .f, .g-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C