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Gene SLC25A48TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
40 supporting clones for gene SLC25A48 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK126812 alzheimer cortex .a 1 to 1877 4 to 1881 exact tiling clone, available from FLJ,   1881/1881
(100 %)
2 diff
(99.9 %id)
BG700532 brain, hippocampus .a 14 to 678 1 to 663   tiling clone,   663/663
(100 %)
7 diff
(99.0 %id)
AI792160 Kidney .a 177 to 645 1 to 469       469/469
(100 %)
16 diff
(96.6 %id)
BI754198 brain .b 1 to 1016 1 to 884   tiling clone,   878/886
(99 %)
20 diff
(97.8 %id)
TI_57217622   .b 1 to 1016 30 to 913       878/915
(95 %)
25 diff
(97.3 %id)
AI625818 Kidney .b 846 to 1486 646 to 6   tiling clone,   641/648
(98 %)
2 diff
(99.7 %id)
AI271449 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 947 to 1491 547 to 1   tiling clone,   547/547
(100 %)
2 diff
(99.7 %id)
AI733049 Kidney .b 973 to 1491 519 to 1   tiling clone,   519/519
(100 %)
0 diff
(100 %id)
AI264172 Kidney .b 973 to 1491 521 to 3       519/521
(99 %)
0 diff
(100 %id)
BG215411   .b 978 to 1490 44 to 557       514/928
(55 %)
17 diff
(98.2 %id)
AI733580 Kidney .b 1004 to 1491 488 to 1       488/488
(100 %)
1 diff
(99.8 %id)
DB550337 hippocampus .b 1027 to 1491 1 to 465     Submitted on the opposite strand 465/465
(100 %)
0 diff
(100 %id)
BF196468 Kidney .b 1037 to 1491 457 to 3       455/457
(99 %)
0 diff
(100 %id)
H22496 brain .b 1174 to 1488 14 to 328       315/328
(96 %)
6 diff
(98.2 %id)
AA994973 Kidney .b 1270 to 1491 221 to 1       221/221
(100 %)
2 diff
(99.1 %id)
AA886167 Kidney .b 1355 to 1491 137 to 1       137/137
(100 %)
1 diff
(99.3 %id)
BM925960 brain .c 1 to 766 15 to 786   tiling clone,   772/1128
(68 %)
21 diff
(98.2 %id)
BM926076 brain .c 103 to 617 167 to 685       518/1359
(38 %)
36 diff
(97.4 %id)
NM_145282.4   .c 173 to 1369 1 to 1197 exact RefSeq, AAA   1197/1197
(100 %)
0 diff
(100 %id)
DA137264 alzheimer cortex .c 176 to 740 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
BG401821 Kidney .c 187 to 767 1 to 592       592/813
(72 %)
17 diff
(98.0 %id)
DB481517 hippocampus .c 194 to 666 1 to 472   tiling clone,   472/472
(100 %)
1 diff
(99.8 %id)
H86943 eye, retina .c 198 to 504 24 to 330       307/361
(85 %)
17 diff
(95.3 %id)
T23648   .c 205 to 542 12 to 349       338/349
(96 %)
7 diff
(98.0 %id)
AI791539 Kidney .c 209 to 680 1 to 472       472/472
(100 %)
2 diff
(99.6 %id)
TI_151769768   .c 209 to 769 99 to 654       556/1184
(46 %)
25 diff
(97.9 %id)
H05644 whole brain .c 210 to 640 1 to 431       431/497
(86 %)
15 diff
(97.0 %id)
BC025747 Brain, adult, 6 pooled whole brains .c 224 to 1369 1 to 1146   tiling clone, available from MGC, AAA   1146/1146
(100 %)
1 diff
(100.0 %id)
BI758252 brain .c 224 to 1023 1 to 798       798/799
(99 %)
18 diff
(97.8 %id)
TI_57220845   .c 224 to 1023 61 to 858       798/859
(92 %)
25 diff
(97.1 %id)
R13125 whole brain .c 288 to 622 4 to 346       343/362
(94 %)
25 diff
(93.1 %id)
CV029477 mixed .c 345 to 824 1 to 480       480/634
(75 %)
6 diff
(99.1 %id)
R40604 whole brain .c 921 to 1369 488 to 15   AAA   474/474
(100 %)
28 diff
(94.1 %id)
H05645 whole brain .c 944 to 1369 451 to 16   AAA   436/436
(100 %)
14 diff
(96.8 %id)
BM988175 mixed .c 1185 to 1336 170 to 19   AAA   152/153
(99 %)
0 diff
(100 %id)
BM704498 eye, optic nerve .d 1 to 587 1 to 587 L22S tiling clone,   587/587
(100 %)
1 diff
(99.9 %id)
BU147380 dorsal root ganglia .e-u 1 to 864 1 to 867   tiling clone,   867/871
(99 %)
16 diff
(98.2 %id)
CD516060 White Matter .e-u 257 to 1097 1 to 853 Q52S S53V A55L I56Q T57* tiling clone,   853/881
(96 %)
18 diff
(98.0 %id)
BU732369 eye, optic nerve .f 1 to 543 561 to 19 exact tiling clone, AAA   543/543
(100 %)
0 diff
(100 %id)
EL949709 eyeball .g 1 to 443 28 to 470 exact tiling clone, AAA   443/470
(94 %)
6 diff
(98.8 %id)
DB307801 hippocampus Gene SLC25A48, variant not shown         This clone was ignored    
DA295381 hippocampus Gene SLC25A48, variant not shown       capped This clone was ignored    
DB546490 hippocampus Gene SLC25A48, variant not shown         Submitted on the opposite strand    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e-u, .f, .g Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C