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Gene UBXN2BTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
252 supporting clones for gene UBXN2B back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BC113645 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .a 1 to 1984 1 to 1984 exact tiling clone,   1984/1984
(100 %)
1 diff
(100.0 %id)
TI_1243023539   .a 1 to 1140 63 to 1213 R262K L263V A264S D265R G266W ...   Submitted on the opposite strand 1151/1290
(89 %)
33 diff
(97.5 %id)
NM_001077619.1   .a 1 to 5067 1 to 5067 exact RefSeq, AAA   5067/5067
(100 %)
0 diff
(100 %id)
BP873204 embryonal kidney .a 77 to 409 1 to 333       333/333
(100 %)
3 diff
(99.1 %id)
DA242203 brain .a 84 to 667 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
AK126300 trachea .a 98 to 5061 1 to 4964 exact tiling clone, available from FLJ,   4964/4964
(100 %)
0 diff
(100 %id)
DA185219 amygdala .a 99 to 648 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
DA759641   .a 99 to 587 2 to 491   capped   490/490
(100 %)
2 diff
(99.6 %id)
DA797745 brain .a 99 to 663 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DA797755 brain .a 99 to 678 2 to 581   capped   580/580
(100 %)
1 diff
(99.9 %id)
DB213388 trachea .a 99 to 649 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA114761 cerebellum .a 109 to 700 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
DA393012 thalamus .a 109 to 699 2 to 592   capped   591/591
(100 %)
1 diff
(99.9 %id)
DA189611 amygdala .a 112 to 686 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
DA240319 brain .a 112 to 684 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA321568 hippocampus .a 112 to 625 2 to 516   capped   515/519
(99 %)
2 diff
(99.7 %id)
DA322946 hippocampus .a 112 to 587 2 to 477   capped   476/476
(100 %)
0 diff
(100 %id)
DB239003 trachea .a 112 to 695 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DA218168 brain .a 116 to 460 2 to 346   capped   345/345
(100 %)
0 diff
(100 %id)
DA101460 cerebellum .a 117 to 700 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
AL831990 skeletal muscle .a 127 to 5067 1 to 4940   available from DKFZ, AAA   4940/4940
(100 %)
11 diff
(99.8 %id)
AL833075 Spinal cord .a 127 to 5062 1 to 4937   available from DKFZ, AAA   4937/4937
(100 %)
8 diff
(99.9 %id)
BX647876 heart .a 127 to 5061 1 to 4936   available from DKFZ, AAA   4936/4936
(100 %)
8 diff
(99.9 %id)
CN336546 embryonic stem cells, DMSO-treated H9 cellline .a 148 to 425 1 to 277       277/277
(100 %)
2 diff
(99.3 %id)
BQ310504 breast .a 302 to 651 1 to 348       348/348
(100 %)
7 diff
(98.0 %id)
BQ226996 melanotic melanoma, skin .a 309 to 858 1 to 562       559/1027
(54 %)
34 diff
(96.7 %id)
AA300880 testis .a 351 to 598 1 to 250       250/253
(98 %)
5 diff
(98.1 %id)
BM781756 Ascites, stomach .a 502 to 1056 1 to 555       555/555
(100 %)
0 diff
(100 %id)
BM818193 Ascites, stomach .a 524 to 880 1 to 357       357/357
(100 %)
0 diff
(100 %id)
DA242649 brain .a 538 to 1129 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
AA723714 pooled .a 801 to 1214 420 to 7       414/420
(98 %)
7 diff
(98.4 %id)
DA211432 brain .a 856 to 1410 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA509830 brain .a 863 to 1442 2 to 582   capped   581/581
(100 %)
1 diff
(99.9 %id)
AW768420 lymph node, lymphoma, follicular mixed small and largecell .a 876 to 1065 217 to 28   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 190/217
(87 %)
0 diff
(100 %id)
DA113926 cerebellum .a 901 to 1478 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
TI_1243023155   .a 910 to 1984 1128 to 58     Submitted on the opposite strand 1071/1260
(85 %)
3 diff
(99.8 %id)
DA105246 cerebellum .a 973 to 1525 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
DB156290 thymus .a 978 to 1537 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
TI_1243021885   .a 1016 to 1984 9 to 974       966/1222
(79 %)
5 diff
(99.6 %id)
BF241252 bone marrow, from acute myelogenous leukemia .a 1016 to 1671 1 to 654       654/842
(77 %)
37 diff
(95.7 %id)
DA804181 brain .a 1016 to 1561 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DA226527 brain .a 1184 to 1808 2 to 628   capped   627/627
(100 %)
2 diff
(99.7 %id)
DA802740 brain .a 1242 to 1762 2 to 524   capped   523/523
(100 %)
2 diff
(99.7 %id)
CX751411 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 1312 to 2069 1 to 751     Submitted on the opposite strand 751/789
(95 %)
12 diff
(98.5 %id)
TI_1243021871   .a 1388 to 1984 1 to 596       596/1255
(47 %)
6 diff
(99.6 %id)
M85807   .a 1538 to 1799 263 to 1       263/263
(100 %)
3 diff
(98.9 %id)
DA187044 amygdala .a 1592 to 2136 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA803234 brain .a 1598 to 2145 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
AK091561 brain .a 1606 to 5067 1 to 3462   available from FLJ,   3462/3462
(100 %)
4 diff
(99.9 %id)
DA454080 tongue, tumor tissue .a 1606 to 2187 2 to 582   capped   581/581
(100 %)
1 diff
(99.9 %id)
DA511214 brain .a 1607 to 2155 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA190087 amygdala .a 1646 to 2218 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DA758450   .a 1653 to 2202 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
DB227587 trachea .a 1659 to 1941 2 to 285   capped   284/284
(100 %)
2 diff
(99.3 %id)
DA711599   .a 1710 to 2274 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DA786189 brain .a 1711 to 2310 2 to 602   capped   601/601
(100 %)
2 diff
(99.7 %id)
TI_149272731   .a 1902 to 2709 57 to 846     Submitted on the opposite strand 790/1026
(76 %)
29 diff
(97.2 %id)
BU675283 lung, Primary Lung Epithelial Cells .a 1905 to 2542 1 to 635     Submitted on the opposite strand 635/635
(100 %)
5 diff
(99.3 %id)
CN278340 embryonic stem cells, DMSO-treated H9 cellline .a 2016 to 2479 1 to 464       464/464
(100 %)
0 diff
(100 %id)
DA772066 brain .a 2086 to 2549 2 to 466   capped   465/465
(100 %)
1 diff
(99.8 %id)
DA783825 brain .a 2093 to 2532 2 to 441   capped   440/440
(100 %)
7 diff
(98.5 %id)
DA740806   .a 2097 to 2623 2 to 528   capped   527/527
(100 %)
0 diff
(100 %id)
BE172383 head_neck .a 2115 to 2234 120 to 1     Submitted on the opposite strand 120/120
(100 %)
0 diff
(100 %id)
DA773362 brain .a 2135 to 2715 2 to 581   capped   580/580
(100 %)
2 diff
(99.7 %id)
DA471606   .a 2136 to 2711 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA495364 brain .a 2141 to 2704 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
DA265428 caudate nucleus .a 2143 to 2705 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DA503635 brain .a 2147 to 2721 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
BM543051 embryonal carcinoma, cell line, testis .a 2166 to 2818 1 to 655       655/1136
(57 %)
22 diff
(98.1 %id)
AL138274 brain .a 2180 to 2750 1 to 571       571/571
(100 %)
0 diff
(100 %id)
BM475863 eye, retinoblastoma .a 2184 to 3093 1 to 918       918/1045
(87 %)
20 diff
(98.1 %id)
DA107977 cerebellum .a 2265 to 2840 2 to 578   capped   577/577
(100 %)
2 diff
(99.7 %id)
DA791175 brain .a 2330 to 2866 2 to 538   capped   537/537
(100 %)
2 diff
(99.7 %id)
DA514366 brain .a 2354 to 2908 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DB128168 thymus .a 2359 to 2932 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA870808 Prostate .a 2439 to 2978 2 to 542   capped   541/541
(100 %)
2 diff
(99.7 %id)
DA817620   .a 2440 to 3010 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA784548 brain .a 2441 to 2937 2 to 499   capped   498/498
(100 %)
1 diff
(99.8 %id)
AK054658   .a 2474 to 5067 1 to 2594   tiling clone, available from FLJ,   2594/2594
(100 %)
2 diff
(100.0 %id)
DA046785   .a 2475 to 3322 2 to 853   capped   852/855
(99 %)
12 diff
(98.6 %id)
BG314778   .a 2492 to 2949 1 to 459       459/459
(100 %)
13 diff
(97.2 %id)
DB269581 uterus .a 2550 to 3097 2 to 548   capped   547/547
(100 %)
2 diff
(99.7 %id)
DA633602 Kidney .a 2553 to 3016 2 to 465   capped   464/464
(100 %)
0 diff
(100 %id)
DA748085   .a 2627 to 3192 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA366657 subthalamic nucleus .a 2631 to 3210 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA960238 Spleen .a 2698 to 3241 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
DA308127 hippocampus .a 2723 to 3316 2 to 595   capped   594/594
(100 %)
3 diff
(99.5 %id)
DA790510 brain .a 2726 to 3284 2 to 562   capped   561/561
(100 %)
2 diff
(99.7 %id)
DA498030 brain .a 2784 to 3347 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DA792696 brain .a 2827 to 3428 2 to 604   capped   603/603
(100 %)
1 diff
(99.9 %id)
DA821685 pericardium .a 2830 to 3403 2 to 575   capped   574/574
(100 %)
2 diff
(99.7 %id)
DA285778 corpus callosum .a 2834 to 3331 2 to 499   capped   498/498
(100 %)
0 diff
(100 %id)
EH345889   .a 2837 to 2916 1 to 81       81/81
(100 %)
1 diff
(98.8 %id)
BM464311 leiomyosarcoma, uterus .a 2844 to 3891 1 to 1049       1049/1049
(100 %)
17 diff
(98.4 %id)
DA133144 alzheimer cortex .a 2846 to 3385 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DB172960 kidney, tumor tissue .a 2853 to 3431 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DB271250 uterus .a 2916 to 3472 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
BU945645 mixed (pool of 40 RNAs) .a 2923 to 3745 1 to 833       833/833
(100 %)
29 diff
(96.6 %id)
DA610888   .a 2924 to 3489 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA695417   .a 2929 to 3517 2 to 591   capped   590/590
(100 %)
2 diff
(99.7 %id)
DA309542 hippocampus .a 2935 to 3534 2 to 602   capped   601/601
(100 %)
2 diff
(99.7 %id)
DA521398 brain .a 2935 to 3487 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
DA049408   .a 2950 to 3528 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
BI771508 pooled lung and spleen .a 2979 to 3789 1 to 810       810/810
(100 %)
2 diff
(99.8 %id)
DA819604   .a 2979 to 3559 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
TI_57182898   .a 2980 to 3789 70 to 878       809/878
(92 %)
6 diff
(99.4 %id)
BG392041 embryonal carcinoma, cell line, testis .a 2988 to 3587 1 to 611       611/611
(100 %)
20 diff
(96.8 %id)
DA149458 amygdala .a 2990 to 3548 2 to 559   capped   558/558
(100 %)
2 diff
(99.7 %id)
DA622257 Kidney .a 2990 to 3534 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DB052778 testis .a 2997 to 3555 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA778218 brain .a 3043 to 3610 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
BQ349606 head_neck .a 3081 to 3245 185 to 19       167/185
(90 %)
0 diff
(100 %id)
DA517597 brain .a 3112 to 3635 2 to 525   capped   524/524
(100 %)
0 diff
(100 %id)
DB115175 thymus .a 3156 to 3699 2 to 545   capped   544/544
(100 %)
2 diff
(99.7 %id)
BU784253 insulinoma, Pancreas .a 3160 to 3720 1 to 561       561/561
(100 %)
4 diff
(99.3 %id)
AA363025 ovary .a 3195 to 3578 1 to 387       387/389
(99 %)
6 diff
(98.5 %id)
DA532265 brain .a 3205 to 3814 2 to 612   capped   611/611
(100 %)
1 diff
(99.9 %id)
AA012887 eye, retina .a 3207 to 3821 1 to 615       615/616
(99 %)
9 diff
(98.6 %id)
BG283938 adenocarcinoma, cell line, Prostate .a 3245 to 3996 1 to 749       749/749
(100 %)
17 diff
(97.8 %id)
BG992566 head_neck .a 3248 to 3475 233 to 4       230/233
(98 %)
0 diff
(100 %id)
AA331622 Embryo, 8 weeks .a 3300 to 3612 1 to 314       314/314
(100 %)
2 diff
(99.4 %id)
BF541055 hypernephroma, Kidney .a 3304 to 4033 1 to 736       736/798
(92 %)
46 diff
(94.3 %id)
BI092353 cervix .a 3305 to 4091 1 to 788       788/791
(99 %)
18 diff
(97.8 %id)
BU146383 dorsal root ganglia .a 3318 to 4243 1 to 933       933/938
(99 %)
23 diff
(97.6 %id)
BE790263 large cell carcinoma, lung .a 3329 to 4151 1 to 843       843/929
(90 %)
30 diff
(96.8 %id)
BG952439 colon .a 3336 to 3702 1 to 365       365/365
(100 %)
2 diff
(99.5 %id)
BG388706 embryonal carcinoma, cell line, testis .a 3356 to 4164 1 to 814       814/885
(91 %)
26 diff
(97.1 %id)
BI018654 marrow .a 3365 to 3694 14 to 343       330/343
(96 %)
6 diff
(98.3 %id)
BF895807 marrow .a 3371 to 3650 1 to 280       280/280
(100 %)
1 diff
(99.7 %id)
BF897310 marrow .a 3371 to 3799 1 to 429       429/429
(100 %)
1 diff
(99.8 %id)
U79282 brain .a 3374 to 5067 1 to 1694   AAA   1694/1694
(100 %)
2 diff
(99.9 %id)
AI066546 pooled .a 3396 to 3722 1 to 327     Submitted on the opposite strand 327/327
(100 %)
0 diff
(100 %id)
BE671456 carcinoid, lung .a 3398 to 3731 1 to 334     Submitted on the opposite strand 334/334
(100 %)
1 diff
(99.8 %id)
DA364568 subthalamic nucleus .a 3399 to 3967 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
BE467763 carcinoid, lung .a 3404 to 3732 1 to 329     Submitted on the opposite strand 329/329
(100 %)
1 diff
(99.7 %id)
T77497 whole brain .a 3406 to 3865 1 to 463       463/468
(98 %)
13 diff
(97.3 %id)
BF900848 marrow .a 3465 to 3902 441 to 4     Submitted on the opposite strand 438/441
(99 %)
0 diff
(100 %id)
BF897010 marrow .a 3473 to 3896 424 to 1     Submitted on the opposite strand 424/424
(100 %)
2 diff
(99.6 %id)
AW380210 head_neck .a 3517 to 4124 15 to 620       606/624
(97 %)
10 diff
(98.4 %id)
BF240744 bone marrow, from acute myelogenous leukemia .a 3522 to 4161 1 to 637       637/1418
(44 %)
31 diff
(97.9 %id)
BG178604 adenocarcinoma, cell line, Prostate .a 3539 to 4270 1 to 731       731/932
(78 %)
32 diff
(96.6 %id)
BE882392 leiomyosarcoma, uterus .a 3553 to 4198 1 to 643       643/950
(67 %)
6 diff
(99.4 %id)
BF735698 amnion_normal .a 3555 to 3950 17 to 415       399/415
(96 %)
6 diff
(98.6 %id)
BF735757 amnion_normal .a 3590 to 4016 437 to 11     Submitted on the opposite strand 427/437
(97 %)
0 diff
(100 %id)
DN918260   .a 3599 to 4217 1 to 618       618/618
(100 %)
3 diff
(99.6 %id)
BF342902 brain, glioblastoma with EGFR amplification .a 3625 to 4353 1 to 728       728/857
(84 %)
17 diff
(98.1 %id)
CA941766 Pancreas, Purified pancreatic islet .a 3650 to 4242 1 to 593       593/593
(100 %)
1 diff
(99.9 %id)
BM557875 duodenal adenocarcinoma, cell line, small intestine .a 3678 to 4636 1 to 971       971/1000
(97 %)
25 diff
(97.5 %id)
BG536542 lung .a 3762 to 4449 1 to 683       683/686
(99 %)
10 diff
(98.6 %id)
BQ343451 nervous_tumor .a 3788 to 4065 1 to 281       281/281
(100 %)
9 diff
(96.8 %id)
AA215313 germinal center B cell .a 3797 to 4241 1 to 445       445/445
(100 %)
1 diff
(99.8 %id)
AA383974 thymus .a 3854 to 4178 1 to 325       325/326
(99 %)
1 diff
(99.7 %id)
DA893304 skeletal muscle .a 3891 to 4430 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
BG178752 adenocarcinoma, cell line, Prostate .a 3936 to 4257 547 to 874       328/954
(34 %)
20 diff
(98.0 %id)
BE142563 head_neck .a 3952 to 4216 275 to 13     Submitted on the opposite strand 263/275
(95 %)
0 diff
(100 %id)
BE142564 head_neck .a 3952 to 4216 279 to 16     Submitted on the opposite strand 264/279
(94 %)
0 diff
(100 %id)
BX089373 placenta .a 3959 to 4724 1 to 765       765/770
(99 %)
2 diff
(99.8 %id)
AA380050 skin .a 3964 to 4328 1 to 367       367/368
(99 %)
3 diff
(99.2 %id)
BU783984 insulinoma, Pancreas .a 4452 to 5061 635 to 26   AAA   610/610
(100 %)
1 diff
(99.9 %id)
DB348896 trachea .a 4498 to 5061 564 to 1       564/564
(100 %)
0 diff
(100 %id)
DB316319 brain .a 4526 to 5067 544 to 1       544/544
(100 %)
3 diff
(99.5 %id)
CA941488 Pancreas, Purified pancreatic islet .a 4530 to 5066 537 to 1       537/537
(100 %)
0 diff
(100 %id)
DB384921   .a 4539 to 5067 531 to 1       531/531
(100 %)
2 diff
(99.7 %id)
R38382 whole brain .a 4801 to 5067 286 to 15   AAA   272/291
(93 %)
7 diff
(97.6 %id)
AA012939 eye, retina .a 4871 to 5061 191 to 1       191/191
(100 %)
0 diff
(100 %id)
CN336547 embryonic stem cells, cell lines H1, H7, andH9 .b 1 to 747 1 to 747 S56I tiling clone,   747/747
(100 %)
4 diff
(99.5 %id)
BQ937602 leiomyosarcoma, uterus .b 337 to 1226 24 to 916   tiling clone,   893/919
(97 %)
14 diff
(98.5 %id)
BE856970 pooled .b 423 to 1040 624 to 7       618/695
(88 %)
13 diff
(98.2 %id)
DB636351 testis .c 1 to 714 5 to 716 S122E N123H N136X V147X K148* tiling clone,   716/717
(99 %)
13 diff
(98.2 %id)
DR003636 hippocampus .c 8 to 513 1 to 506   tiling clone,   506/506
(100 %)
4 diff
(99.3 %id)
AA356150   .c 36 to 180 1 to 145       145/145
(100 %)
3 diff
(98.0 %id)
CA422938 cell lines, Chondrosarcoma .c 262 to 873 629 to 19   AAA   613/611
(100 %)
2 diff
(99.7 %id)
AI636090 Kidney .c 287 to 876 594 to 6       589/594
(99 %)
1 diff
(99.9 %id)
AW606781 head_neck .c 297 to 794 508 to 12       497/508
(97 %)
0 diff
(100 %id)
AW606773 head_neck .c 304 to 835 545 to 14       532/545
(97 %)
0 diff
(100 %id)
BE502216 pooled germ cell tumors .c 443 to 878 446 to 12   tiling clone, AAA   435/435
(100 %)
1 diff
(99.8 %id)
BF508075   .c 522 to 878 374 to 18   AAA   357/357
(100 %)
0 diff
(100 %id)
BG539068 lung .d 1 to 526 1 to 522 P21L P22R S23A A24R R25G ... tiling clone,   655/885
(74 %)
16 diff
(98.2 %id)
DA735049   .e-u 1 to 640 2 to 640   tiling clone, capped   639/641
(99 %)
7 diff
(99.0 %id)
R71318 placenta .e-u 1195 to 1609 1 to 421   tiling clone,   421/431
(97 %)
9 diff
(98.0 %id)
AW958412   .e-u 1201 to 1782 1 to 589 D48G E49*     589/589
(100 %)
15 diff
(97.5 %id)
DA584880 lung .e-u 1220 to 1792 2 to 574 exact capped   573/573
(100 %)
0 diff
(100 %id)
CD000642 Pooled-Skin .e-u 1225 to 1830 1 to 618 K58E     618/786
(78 %)
15 diff
(98.1 %id)
AW363834 colon .e-u 1237 to 1648 1 to 411       411/422
(97 %)
7 diff
(98.4 %id)
H22503 brain .e-u 1287 to 1738 1 to 454 E52X P53A T54H T55X A56C ...     454/454
(100 %)
6 diff
(98.7 %id)
H41397 brain .e-u 1288 to 1544 1 to 257       257/263
(97 %)
1 diff
(99.7 %id)
BG529420 embryonal carcinoma, testis .e-u 1311 to 2044 1 to 740 E66D E67G F68I S69L     740/740
(100 %)
22 diff
(97.1 %id)
CB053258 leiomyosarcoma, soft tissue .e-u 1338 to 1878 2 to 542 exact fully sequenced,   541/542
(99 %)
5 diff
(99.1 %id)
BG255853 adenocarcinoma, cell line, Prostate .e-u 1345 to 2001 11 to 661 P2W A3F L5G P6R D7*     651/662
(98 %)
21 diff
(96.9 %id)
BG618068 Liver .e-u 1402 to 2103 1 to 698 exact     698/698
(100 %)
8 diff
(98.9 %id)
AW879311 ovary .e-u 1492 to 1768 279 to 2 A56C E57R K58E F59V S60F ...     278/279
(99 %)
0 diff
(100 %id)
AW879316 ovary .e-u 1492 to 1762 290 to 20 exact     271/290
(93 %)
0 diff
(100 %id)
BF351547.
matches multiple genes
head_neck .e-u 1508 to 1782 1 to 279 A3V S4L L5C P6Q D7M ... tiling clone, also hits gene snergaby 279/283
(98 %)
11 diff
(96.2 %id)
TI_151808671.
matches multiple genes
  .e-u 1510 to 2297 75 to 862 exact tiling clone, AAA Submitted on the opposite strand, submitted on the opposite strand, also hits gene vorjoy 788/788
(100 %)
5 diff
(99.4 %id)
CA951114.
matches multiple genes
Pancreas, Purified pancreatic islet .e-u 1512 to 2111 1 to 600 exact   Submitted on the opposite strand, also hits gene vorjoy 600/600
(100 %)
0 diff
(100 %id)
N40262 melanocyte .e-u 1518 to 1973 1 to 460 exact     460/520
(88 %)
6 diff
(98.9 %id)
BU622593 cell lines, Chondrosarcoma .e-u 1552 to 2297 756 to 19   AAA   738/738
(100 %)
11 diff
(98.6 %id)
DB515710 testis .e-u 1582 to 2295 1 to 714     Submitted on the opposite strand 714/716
(99 %)
7 diff
(99.1 %id)
BU616960 Cell Line, Chondrosarcoma .e-u 1599 to 2297 716 to 19   AAA   698/698
(100 %)
1 diff
(99.9 %id)
CB162664 Liver .e-u 1603 to 2218 1 to 615       615/615
(100 %)
1 diff
(99.9 %id)
AW021828.
matches multiple genes
cochlea, ear .e-u 1629 to 2095 7 to 477     Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base), also hits gene ADD3 471/477
(98 %)
6 diff
(98.8 %id)
CA429571 Cell Line, Chondrosarcoma .e-u 1656 to 2297 660 to 19   AAA   642/642
(100 %)
1 diff
(99.9 %id)
BQ027160 lung, Metastatic Chondrosarcoma .e-u 1659 to 2297 656 to 19   AAA   638/638
(100 %)
1 diff
(99.9 %id)
TI_154094468   .e-u 1660 to 2297 761 to 119   AAA   643/689
(93 %)
37 diff
(94.7 %id)
AW968812   .e-u 1682 to 2293 615 to 4     Submitted on the opposite strand 612/615
(99 %)
0 diff
(100 %id)
H29915 brain .e-u 1754 to 2157 1 to 409       409/435
(94 %)
11 diff
(97.5 %id)
DN918259   .e-u 1762 to 2299 541 to 4       538/541
(99 %)
0 diff
(100 %id)
AW172763 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .e-u 1764 to 2299 537 to 1       537/537
(100 %)
2 diff
(99.7 %id)
CK301074 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .e-u 1769 to 2297 547 to 19   AAA   529/529
(100 %)
5 diff
(99.1 %id)
AI076804   .e-u 1774 to 2300 531 to 5       527/531
(99 %)
0 diff
(100 %id)
AA534963 colon .e-u 1776 to 2299 520 to 1       520/549
(94 %)
10 diff
(98.2 %id)
AW194133 serous papillary carcinoma, high grade, 2pooled tumors, uterus .e-u 1785 to 2300 523 to 7       517/523
(98 %)
0 diff
(100 %id)
BE074480 breast .e-u 1791 to 2060 284 to 15     Submitted on the opposite strand 270/297
(90 %)
0 diff
(100 %id)
BF114915 fibrotheoma, ovary .e-u 1798 to 2303 506 to 1       506/506
(100 %)
1 diff
(99.9 %id)
AI004604   .e-u 1815 to 2300 489 to 4       486/489
(99 %)
0 diff
(100 %id)
AI245523 Kidney .e-u 1819 to 2303 471 to 1       471/550
(85 %)
41 diff
(92.6 %id)
D61166   .e-u 1835 to 2100 1 to 265       265/265
(100 %)
5 diff
(98.2 %id)
D60157   .e-u 1836 to 2255 1 to 418       418/418
(100 %)
4 diff
(99.1 %id)
D61136   .e-u 1836 to 2200 1 to 364       364/364
(100 %)
2 diff
(99.5 %id)
AW131212 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .e-u 1841 to 2299 459 to 1       459/459
(100 %)
1 diff
(99.8 %id)
CB053257 leiomyosarcoma, soft tissue .e-u 1848 to 2297 477 to 28   fully sequenced, AAA   450/450
(100 %)
1 diff
(99.8 %id)
AA910687 Kidney .e-u 1851 to 2300 451 to 2       450/451
(99 %)
0 diff
(100 %id)
BM992212 Bone, Subchondral Bone .e-u 1851 to 2297 465 to 19   AAA   447/447
(100 %)
6 diff
(98.7 %id)
AI307158 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .e-u 1857 to 2300 444 to 1       444/444
(100 %)
0 diff
(100 %id)
AW474505 serous papillary carcinoma, high grade, 2pooled tumors, uterus .e-u 1859 to 2300 445 to 4       442/445
(99 %)
0 diff
(100 %id)
AW474552 serous papillary carcinoma, high grade, 2pooled tumors, uterus .e-u 1859 to 2300 445 to 4       442/445
(99 %)
0 diff
(100 %id)
AI278192 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .e-u 1881 to 2304 424 to 1       424/424
(100 %)
1 diff
(99.8 %id)
BG617485 Liver .e-u 1895 to 2673 1 to 776       776/781
(99 %)
18 diff
(97.7 %id)
C05194 heart .e-u 1900 to 2059 34 to 193       160/193
(82 %)
5 diff
(97.5 %id)
AI888361 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .e-u 1910 to 2303 394 to 1       394/394
(100 %)
0 diff
(100 %id)
R71261 placenta .e-u 1912 to 2303 397 to 1       397/398
(99 %)
13 diff
(96.8 %id)
AI471953 pooled .e-u 1919 to 2303 385 to 1       385/385
(100 %)
0 diff
(100 %id)
AW474697 serous papillary carcinoma, high grade, 2pooled tumors, uterus .e-u 1924 to 2304 381 to 1       381/381
(100 %)
0 diff
(100 %id)
AA593630 normal prostate, Prostate .e-u 1928 to 2303 376 to 1       376/376
(100 %)
0 diff
(100 %id)
AI399838 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .e-u 1934 to 2296 362 to 1       362/373
(97 %)
0 diff
(100 %id)
AI561089 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .e-u 1942 to 2303 382 to 21   AAA   362/362
(100 %)
8 diff
(97.8 %id)
AA548074 adrenal adenoma, adrenal gland .e-u 1968 to 2304 338 to 2       337/338
(99 %)
0 diff
(100 %id)
AI090885 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .e-u 1985 to 2297 313 to 1       313/313
(100 %)
0 diff
(100 %id)
DB367220   .e-u 1986 to 2508 521 to 1       521/521
(100 %)
9 diff
(98.3 %id)
TI_159715056   .e-u 1991 to 2303 415 to 104   AAA   312/1000
(31 %)
2 diff
(99.8 %id)
CB321935 Human Lung Epithelial cells, lung .e-u 1991 to 2303 330 to 19   AAA   312/318
(98 %)
2 diff
(99.4 %id)
CA310985 Human Lung Epithelial cells, lung .e-u 1991 to 2303 330 to 19   AAA   312/318
(98 %)
4 diff
(98.8 %id)
AW770372 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .e-u 2001 to 2297 312 to 16   AAA   297/297
(100 %)
4 diff
(98.7 %id)
AA489698 germinal center B cell .e-u 2002 to 2297 316 to 21   AAA   296/296
(100 %)
0 diff
(100 %id)
BI492758.
matches multiple genes
cochlea, ear .e-u 2032 to 2303 290 to 19   AAA also hits gene forspa 272/272
(100 %)
0 diff
(100 %id)
T99941 liver and spleen .e-u 2065 to 2481 1 to 428       428/431
(99 %)
15 diff
(96.6 %id)
H49338 liver and spleen .e-u 2065 to 2387 1 to 324       324/324
(100 %)
1 diff
(99.7 %id)
AA894818 Kidney .e-u 2140 to 2299 160 to 1       160/160
(100 %)
0 diff
(100 %id)
CB155575 brain .e-u 2163 to 2699 1 to 537   tiling clone,   537/537
(100 %)
0 diff
(100 %id)
GD138824   .e-u 2237 to 2300 1 to 64       64/76
(84 %)
2 diff
(97.4 %id)
BM827944 Ascites, stomach .e-u 2270 to 2901 1 to 632       632/632
(100 %)
2 diff
(99.7 %id)
AW975379   .e-u 2444 to 2936 111 to 605       495/605
(81 %)
6 diff
(99.1 %id)
H21481 breast .e-u 2525 to 2875 1 to 359       359/359
(100 %)
8 diff
(97.8 %id)
AA721795 Ewing's sarcoma .e-u 2635 to 2968 334 to 1   tiling clone,   334/334
(100 %)
0 diff
(100 %id)
H49339 liver and spleen .e-u 2662 to 2960 299 to 1       299/299
(100 %)
1 diff
(99.7 %id)
AI805672 serous papillary carcinoma, high grade, 2pooled tumors, uterus .e-u 2675 to 2967 310 to 18   AAA   293/293
(100 %)
1 diff
(99.7 %id)
CB963787 Blood vessels - aorta, basilar and artery .f-u 1 to 636 1 to 641 exact tiling clone, available from MGC,   641/797
(80 %)
16 diff
(98.0 %id)
BC070386 Blood vessels- blood vessel, aorta, basilarartery. .f-u 3 to 1095 1 to 1090 exact tiling clone, available from MGC, AAA   1090/1090
(100 %)
4 diff
(99.7 %id)
AA455409 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f-u 679 to 1076 1 to 397   fully sequenced,   397/397
(100 %)
9 diff
(97.8 %id)
BX104043 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f-u 680 to 1100 1 to 421   AAA   421/421
(100 %)
3 diff
(99.3 %id)
AA456048 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f-u 919 to 1100 182 to 1   fully sequenced,   182/182
(100 %)
2 diff
(99.0 %id)
AI377411   Gene UBXN2B, variant not shown         This clone was ignored    
CA336764 posterior rhombomeres 5-8 (4 pooled) Gene UBXN2B, variant not shown         This clone was ignored    
DB041023 testis Gene UBXN2B, variant not shown       capped This clone was ignored    
DB337840 testis Gene UBXN2B, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e-u, .f-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI