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Gene CMBLTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
230 supporting clones for gene CMBL back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_138809.3   .a 1 to 4046 2 to 4047 exact RefSeq,   4047/4047
(100 %)
0 diff
(100 %id)
DA628493 Kidney .a 1 to 549 2 to 550   tiling clone, capped   549/549
(100 %)
0 diff
(100 %id)
AL550955 placenta, Placenta Cot 25-normalized .a 30 to 1007 1 to 973       972/973
(99 %)
29 diff
(97.1 %id)
BI547200 brain, hippocampus .a 30 to 405 1 to 381       381/582
(65 %)
11 diff
(98.2 %id)
BP231331 muscle .a 35 to 617 1 to 583       583/583
(100 %)
0 diff
(100 %id)
TI_44167883   .a 35 to 439 127 to 539       413/703
(58 %)
6 diff
(99.2 %id)
CN351530 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 43 to 686 1 to 644       644/644
(100 %)
2 diff
(99.7 %id)
BG180430 adenocarcinoma, cell line, Prostate .a 127 to 851 1 to 718       718/954
(75 %)
29 diff
(97.0 %id)
BE882464 leiomyosarcoma, uterus .a 128 to 768 1 to 647       647/1044
(61 %)
31 diff
(97.1 %id)
BP315139 mammary gland .a 135 to 721 1 to 586       586/586
(100 %)
1 diff
(99.9 %id)
BM784608 myeloma .a 156 to 572 1 to 417       417/417
(100 %)
0 diff
(100 %id)
BP277030 Kidney .a 159 to 723 1 to 565       565/565
(100 %)
3 diff
(99.5 %id)
DA820974 pericardium .a 160 to 728 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
BI089287 cervix .a 161 to 806 1 to 653       653/669
(97 %)
19 diff
(97.2 %id)
DA428058 colon .a 167 to 723 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
BP275605 Kidney .a 170 to 665 1 to 496       496/583
(85 %)
7 diff
(98.8 %id)
DA160964 amygdala .a 171 to 751 2 to 583   capped   582/582
(100 %)
1 diff
(99.9 %id)
BU158514 large cell carcinoma, lung .a 173 to 985 42 to 862       821/903
(90 %)
22 diff
(97.6 %id)
DB479620 hippocampus .a 178 to 499 1 to 323       323/325
(99 %)
5 diff
(98.5 %id)
DA751156   .a 189 to 731 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
BP274725 Kidney .a 193 to 773 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
DB471087 hippocampus .a 194 to 665 1 to 473       473/477
(99 %)
3 diff
(99.4 %id)
BE267060 lung, small cell carcinoma .a 196 to 845 31 to 681       651/681
(95 %)
7 diff
(99.0 %id)
BX358560 Placenta Cot 25-normalized .a 197 to 1309 1 to 1099 T171L L172C F173S I174F F175L ...     1099/1137
(96 %)
29 diff
(97.5 %id)
BP277274 Kidney .a 197 to 776 1 to 580       580/580
(100 %)
0 diff
(100 %id)
DA542582 lung .a 198 to 767 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
CN351531 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 199 to 722 1 to 525       525/525
(100 %)
4 diff
(99.3 %id)
BJ995645 hepatoblastoma .a 204 to 683 1 to 480       480/480
(100 %)
0 diff
(100 %id)
AL036038 brain .a 206 to 493 1 to 288       288/288
(100 %)
3 diff
(99.0 %id)
BQ927626 large cell carcinoma, lung .a 206 to 1153 13 to 970       958/972
(98 %)
25 diff
(97.5 %id)
R26941 placenta .a 208 to 520 1 to 315       315/371
(84 %)
12 diff
(96.8 %id)
BP381636 adipose tissue .a 209 to 827 1 to 619       619/619
(100 %)
4 diff
(99.4 %id)
AJ278125 skeletal muscle .a 209 to 2364 1 to 2156 exact     2156/2156
(100 %)
6 diff
(99.8 %id)
AK074197 adipose tissue .a 209 to 1521 1 to 1313 K99N Q104H available from FLJ, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 1313/1313
(100 %)
3 diff
(99.8 %id)
BQ051362 large cell carcinoma, lung .a 209 to 1011 1 to 806       806/1032
(78 %)
22 diff
(97.9 %id)
BP275174 Kidney .a 209 to 773 1 to 565       565/566
(99 %)
0 diff
(100 %id)
DA716718   .a 210 to 773 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DB011567 colon, tumor tissue .a 210 to 761 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
BE280583 choriocarcinoma, placenta .a 212 to 904 1 to 696       694/734
(94 %)
19 diff
(97.5 %id)
DA648428   .a 216 to 757 2 to 543   capped   542/542
(100 %)
1 diff
(99.9 %id)
DA899693 skeletal muscle .a 216 to 779 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
BM740116 stomach .a 217 to 736 1 to 524       524/524
(100 %)
4 diff
(99.3 %id)
DA429220 colon .a 218 to 539 2 to 323   capped   322/322
(100 %)
0 diff
(100 %id)
BI335149 cervical carcinoma cell line, cervix .a 218 to 857 1 to 652       652/795
(82 %)
13 diff
(98.4 %id)
DA711163   .a 218 to 779 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA823444 pericardium .a 218 to 771 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA826112 pericardium .a 218 to 690 2 to 474   capped   473/473
(100 %)
0 diff
(100 %id)
BM748057 stomach .a 218 to 517 1 to 297       297/297
(100 %)
5 diff
(98.4 %id)
DA904620   .a 218 to 764 2 to 549   capped   548/552
(99 %)
3 diff
(99.5 %id)
CB268420 adipose .a 219 to 596 1 to 377       377/377
(100 %)
2 diff
(99.5 %id)
DA428110 colon .a 221 to 723 2 to 504   capped   503/503
(100 %)
0 diff
(100 %id)
CK431244 eye, lacrimal gland .a 223 to 839 1 to 617       617/617
(100 %)
0 diff
(100 %id)
DA895714 skeletal muscle .a 224 to 793 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
CX872626 embryonic stem .a 239 to 935 1 to 697       697/697
(100 %)
1 diff
(99.9 %id)
CX872708 embryonic stem .a 239 to 917 1 to 679       679/684
(99 %)
1 diff
(99.9 %id)
CX872709 embryonic stem .a 239 to 1001 1 to 763       763/763
(100 %)
1 diff
(99.9 %id)
BP203414 coronary artery .a 241 to 823 1 to 583       583/583
(100 %)
0 diff
(100 %id)
AV655141 corresponding non cancerous liver tissue .a 241 to 660 1 to 420     Submitted on the opposite strand 420/420
(100 %)
4 diff
(99.1 %id)
DA998922 breast, tumor tissue .a 242 to 810 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
BE543309 cervical carcinoma cell line, cervix .a 244 to 923 1 to 679       679/873
(77 %)
16 diff
(98.2 %id)
DR421752 eye, Pterygium .a 244 to 873 1 to 630       630/630
(100 %)
0 diff
(100 %id)
CN351529 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 249 to 662 1 to 413       413/413
(100 %)
1 diff
(99.8 %id)
BG420127 Kidney, renal cell adenocarcinoma .a 251 to 989 1 to 730       730/939
(77 %)
20 diff
(97.9 %id)
TI_154196045   .a 261 to 959 24 to 731       708/1062
(66 %)
32 diff
(97.0 %id)
AA316041 colon .a 268 to 665 1 to 398       398/405
(98 %)
1 diff
(99.8 %id)
DA823024 pericardium .a 269 to 842 2 to 575   capped   574/575
(99 %)
1 diff
(99.9 %id)
BP250253 hippocampus .a 282 to 863 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DA177975 amygdala .a 289 to 835 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
AA211024   .a 293 to 665 1 to 380       380/381
(99 %)
46 diff
(88.0 %id)
BC001573 Placenta, choriocarcinoma .a 294 to 2081 1 to 1788 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 1788/1788
(100 %)
0 diff
(100 %id)
DA893610 skeletal muscle .a 301 to 845 2 to 546   capped   545/545
(100 %)
1 diff
(99.9 %id)
DW427522 Liver .a 302 to 563 17 to 278       262/278
(94 %)
11 diff
(96.1 %id)
BG427898 Kidney .a 302 to 922 1 to 627       627/839
(74 %)
26 diff
(97.0 %id)
AV648926 corresponding non cancerous liver tissue .a 310 to 767 1 to 458     Submitted on the opposite strand 458/458
(100 %)
16 diff
(96.6 %id)
BG428780 Kidney .a 310 to 1105 1 to 803       803/842
(95 %)
29 diff
(96.6 %id)
DA034574 breast .a 312 to 867 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
BE541527 cervix .a 316 to 1054 1 to 753       753/763
(98 %)
64 diff
(91.7 %id)
DN997360 breast cancer, Mammary gland (cancer tissue) .a 324 to 899 1 to 576       576/576
(100 %)
5 diff
(99.2 %id)
BU151562 dorsal root ganglia .a 325 to 1170 1 to 861       861/870
(98 %)
20 diff
(97.8 %id)
TI_1948101026   .a 440 to 1193 118 to 874 S188I L189F L190A T191D Q192S ... fully sequenced,   755/872
(86 %)
25 diff
(97.2 %id)
TI_1948101319   .a 440 to 1191 117 to 874 S161F E162* fully sequenced,   758/874
(86 %)
34 diff
(96.2 %id)
AK315390 hippocampus .a 446 to 1188 1 to 743 Q104H K115E     743/743
(100 %)
2 diff
(99.8 %id)
DA317387 hippocampus .a 447 to 1024 2 to 579   capped   578/578
(100 %)
2 diff
(99.7 %id)
TI_1948101170   .a 447 to 804 125 to 482   fully sequenced,   358/382
(93 %)
6 diff
(98.5 %id)
CV024900 mixed .a 451 to 1021 1 to 571       571/571
(100 %)
0 diff
(100 %id)
AW360965 colon .a 457 to 1059 71 to 673       603/610
(98 %)
9 diff
(98.6 %id)
CA841244 Pancreas, Purified pancreatic islet .a 490 to 640 11 to 161       151/161
(93 %)
6 diff
(96.3 %id)
CB070162 Pancreas, Purified pancreatic islet .a 560 to 1089 1 to 530       530/530
(100 %)
1 diff
(99.9 %id)
AA112034 muscle, skeletal muscle .a 630 to 1035 1 to 406       406/406
(100 %)
1 diff
(99.8 %id)
AA317168 lung .a 638 to 886 1 to 249       249/249
(100 %)
0 diff
(100 %id)
AW967044   .a 639 to 1352 1 to 716       716/717
(99 %)
12 diff
(98.4 %id)
BX370060 Placenta Cot 25-normalized .a 663 to 1564 1 to 899       899/899
(100 %)
20 diff
(97.8 %id)
BX370061 Placenta Cot 25-normalized .a 664 to 1589 1 to 918       918/918
(100 %)
28 diff
(97.0 %id)
CA428479 cell lines, Chondrosarcoma .a 703 to 1299 615 to 19   AAA   597/597
(100 %)
1 diff
(99.9 %id)
BE177398 head_neck .a 708 to 1372 663 to 1     Submitted on the opposite strand 663/666
(99 %)
11 diff
(98.4 %id)
CK002077 brain/CNS, Bulk tissue from Human Spinal cord .a 711 to 1324 1 to 613       613/644
(95 %)
13 diff
(98.0 %id)
TI_1948101171   .a 743 to 1187 566 to 122   fully sequenced,   445/566
(78 %)
0 diff
(100 %id)
BP275934 Kidney .a 774 to 1341 1 to 569       569/569
(100 %)
2 diff
(99.7 %id)
BG429931 Kidney .a 802 to 1549 1 to 741       741/743
(99 %)
11 diff
(98.6 %id)
BE709273 head_neck .a 805 to 1336 532 to 1       532/532
(100 %)
14 diff
(97.4 %id)
AI765501 2 pooled tumors (clear cell type), Kidney .a 808 to 1303 496 to 1       496/496
(100 %)
1 diff
(99.8 %id)
BX493644   .a 817 to 1385 1 to 570       570/570
(100 %)
6 diff
(99.0 %id)
EB387439 eye, optic nerve .a 822 to 1658 1 to 837       837/837
(100 %)
0 diff
(100 %id)
BX350197 Placenta Cot 25-normalized .a 828 to 1786 958 to 1       958/958
(100 %)
14 diff
(98.6 %id)
AW612048 Kidney .a 880 to 1409 532 to 3       530/532
(99 %)
0 diff
(100 %id)
TI_1948101027   .a 886 to 1187 424 to 123   fully sequenced,   302/424
(71 %)
0 diff
(100 %id)
TI_1948101320   .a 886 to 1187 425 to 124   fully sequenced,   302/425
(71 %)
0 diff
(100 %id)
CF134941 CNCAP(3)T-225 cell line, Prostate .a 890 to 1448 1 to 559       559/559
(100 %)
6 diff
(99.0 %id)
TI_154163077   .a 896 to 1615 80 to 798       719/719
(100 %)
8 diff
(98.9 %id)
AW271852 Kidney .a 898 to 1299 415 to 14   AAA   402/402
(100 %)
2 diff
(99.6 %id)
BG437688 large cell carcinoma, lung .a 946 to 1813 1 to 868       868/889
(97 %)
26 diff
(97.1 %id)
BF592020 Kidney .a 972 to 1409 438 to 1       438/438
(100 %)
1 diff
(99.8 %id)
CF144378 CNCAP(3)T-225 cell line, Prostate .a 988 to 1468 8 to 488       481/488
(98 %)
7 diff
(98.6 %id)
CF144457 CNCAP(3)T-225 cell line, Prostate .a 988 to 1463 8 to 483       476/483
(98 %)
6 diff
(98.8 %id)
CF144508 CNCAP(3)T-225 cell line, Prostate .a 988 to 1414 8 to 434       427/434
(98 %)
6 diff
(98.7 %id)
TI_154176408   .a 988 to 1698 94 to 800       707/994
(71 %)
29 diff
(97.1 %id)
TI_154176504   .a 988 to 1651 95 to 759       665/1078
(61 %)
12 diff
(98.9 %id)
TI_154176581   .a 988 to 1526 80 to 618       539/543
(99 %)
6 diff
(98.9 %id)
AL036039 brain .a 997 to 1542 546 to 1       546/546
(100 %)
0 diff
(100 %id)
R26717 placenta .a 1009 to 1303 298 to 2       297/409
(72 %)
0 diff
(100 %id)
AI951240 breast, four pooled high-grade tumors, including twoprimary tumors and two metastatic to ovary .a 1016 to 1521 507 to 1       507/507
(100 %)
1 diff
(99.9 %id)
CF141686 CNCAP(3)T-225 cell line, Prostate .a 1042 to 1538 8 to 504       497/504
(98 %)
3 diff
(99.5 %id)
TI_154172530   .a 1042 to 1727 89 to 779       691/1130
(61 %)
21 diff
(98.2 %id)
BU533190 mixed (pool of 40 RNAs) .a 1085 to 1719 1 to 634   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 634/635
(99 %)
5 diff
(99.3 %id)
CN351532 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 1088 to 1644 1 to 557       557/557
(100 %)
0 diff
(100 %id)
AW188545 colon, moderately differentiated adenocarcinoma .a 1093 to 1526 434 to 1       434/434
(100 %)
0 diff
(100 %id)
BG116951 duodenal adenocarcinoma, cell line, small intestine .a 1093 to 1813 1 to 718       718/954
(75 %)
15 diff
(98.5 %id)
BI255804 cervical carcinoma cell line, cervix .a 1108 to 1608 1 to 505       505/505
(100 %)
4 diff
(99.3 %id)
BU176402 epithelioid carcinoma, Pancreas .a 1108 to 1995 1 to 896       896/897
(99 %)
20 diff
(97.8 %id)
BI222294 cervical carcinoma cell line, cervix .a 1152 to 1994 1 to 843       843/844
(99 %)
27 diff
(96.9 %id)
BG165297 hypernephroma, cell line, Kidney .a 1178 to 1693 1 to 516   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 516/516
(100 %)
1 diff
(99.9 %id)
DB330911 skeletal muscle .a 1196 to 1687 492 to 1       492/492
(100 %)
3 diff
(99.4 %id)
BI859391 breast, mammary adenocarcinoma, cell line .a 1205 to 1983 1 to 780       780/784
(99 %)
14 diff
(98.3 %id)
TI_57190685   .a 1205 to 1983 53 to 832       780/784
(99 %)
14 diff
(98.3 %id)
BF215999 brain, glioblastoma .a 1237 to 1914 1 to 666       666/873
(76 %)
29 diff
(96.7 %id)
BG104598 adrenal cortex carcinoma, cell line, adrenal gland .a 1274 to 2016 1 to 742   AAA   742/954
(77 %)
51 diff
(94.7 %id)
AI982523 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 1291 to 1715 425 to 1       425/425
(100 %)
0 diff
(100 %id)
BE537881 cervix .a 1312 to 2048 1 to 746       746/878
(84 %)
57 diff
(93.6 %id)
BQ778578 Pancreas, Purified pancreatic islet .a 1395 to 1948 2 to 555   fully sequenced,   554/555
(99 %)
7 diff
(98.8 %id)
AA211734 muscle, skeletal muscle .a 1433 to 2081 646 to 1       646/647
(99 %)
18 diff
(97.3 %id)
CR735299 astrocytoma grade IV, cell line, brain .a 1456 to 1933 37 to 514       478/514
(92 %)
6 diff
(98.9 %id)
BM549154 astrocytoma grade IV, cell line, brain .a 1456 to 2361 25 to 934   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 910/934
(97 %)
6 diff
(99.4 %id)
BM045297 carcinoma, cell line, Prostate .a 1457 to 2100 1 to 652       652/1084
(60 %)
22 diff
(98.0 %id)
BU153381 large cell carcinoma, lung .a 1496 to 2354 1 to 862   AAA   862/872
(98 %)
9 diff
(99.0 %id)
BQ943203 large cell carcinoma, lung .a 1587 to 2362 1 to 775   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 775/775
(100 %)
3 diff
(99.7 %id)
BM769671 stomach .a 1591 to 2224 1 to 636       636/636
(100 %)
1 diff
(99.9 %id)
BM843377 stomach .a 1591 to 2229 1 to 641       641/641
(100 %)
1 diff
(99.9 %id)
BM831046 stomach .a 1591 to 2229 1 to 641       641/641
(100 %)
1 diff
(99.9 %id)
BI334670 cervical carcinoma cell line, cervix .a 1597 to 2273 13 to 690       678/694
(97 %)
16 diff
(97.7 %id)
BM830112 stomach .a 1599 to 2291 1 to 691       691/695
(99 %)
2 diff
(99.8 %id)
BM829849 stomach .a 1600 to 2262 1 to 661       661/661
(100 %)
4 diff
(99.4 %id)
TI_154046501   .a 1601 to 2362 851 to 90   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 762/964
(79 %)
3 diff
(99.7 %id)
W63553 senescent fibroblast .a 1618 to 2157 11 to 547       537/616
(87 %)
10 diff
(98.4 %id)
TI_154091198   .a 1626 to 2362 822 to 91   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 732/861
(85 %)
32 diff
(96.3 %id)
DB539800 hippocampus .a 1627 to 2081 1 to 458     Submitted on the opposite strand 458/458
(100 %)
17 diff
(96.3 %id)
BM988489 lung, Metastatic Chondrosarcoma .a 1657 to 2362 722 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 704/704
(100 %)
3 diff
(99.6 %id)
CA412397 Chondrosarcoma Grade II, Left Pelvis .a 1663 to 2362 719 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 701/701
(100 %)
1 diff
(99.9 %id)
CA422405 cell lines, Chondrosarcoma .a 1700 to 2363 680 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 662/662
(100 %)
4 diff
(99.4 %id)
BM791734 stomach .a 1714 to 2350 10 to 643       634/643
(98 %)
1 diff
(99.9 %id)
CA435363 lung, Metastatic Chondrosarcoma .a 1731 to 2363 648 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 630/630
(100 %)
4 diff
(99.4 %id)
AV706135 adrenal gland .a 1736 to 2364 1 to 630       630/643
(97 %)
3 diff
(99.6 %id)
DA642399 Liver .a 1755 to 2391 2 to 634   tiling clone, capped   633/633
(100 %)
4 diff
(99.4 %id)
AA209487   .a 1763 to 2362 609 to 1       609/649
(93 %)
26 diff
(96.0 %id)
BF970294 adrenal cortex carcinoma, cell line, adrenal gland .a 1772 to 2363 1 to 589   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 589/589
(100 %)
12 diff
(98.0 %id)
BQ233724 leiomyosarcoma, uterus .a 1833 to 2362 1 to 528   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 528/528
(100 %)
2 diff
(99.7 %id)
AW470009 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 1854 to 2362 508 to 2       507/508
(99 %)
0 diff
(100 %id)
AA083693   .a 1874 to 2106 1 to 230   fully sequenced,   230/230
(100 %)
4 diff
(98.3 %id)
BU941697 mixed (pool of 40 RNAs) .a 1894 to 2360 1 to 466       466/471
(98 %)
4 diff
(99.2 %id)
BU537517 mixed (pool of 40 RNAs) .a 1899 to 2366 1 to 467       467/473
(98 %)
8 diff
(98.4 %id)
AI611162 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 1918 to 2363 448 to 3       446/513
(86 %)
0 diff
(100 %id)
BQ778356 Pancreas, Purified pancreatic islet .a 1918 to 2362 447 to 4   fully sequenced,   444/447
(99 %)
0 diff
(100 %id)
AW024203 Kidney .a 1922 to 2366 449 to 5       445/449
(99 %)
0 diff
(100 %id)
AA086463 muscle, skeletal muscle .a 1930 to 2362 432 to 1       432/432
(100 %)
2 diff
(99.6 %id)
AW005008 Kidney .a 1941 to 2358 420 to 6       415/420
(98 %)
0 diff
(100 %id)
CD243152 brain, Pituitary .a 1948 to 2364 20 to 434   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 415/434
(95 %)
6 diff
(98.7 %id)
AW192209 adenocarcinoma, Pancreas .a 1967 to 2362 398 to 5       394/398
(98 %)
0 diff
(100 %id)
BJ995646 hepatoblastoma .a 1975 to 2319 345 to 1       345/345
(100 %)
0 diff
(100 %id)
AI417583 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 2004 to 2366 365 to 4       449/522
(86 %)
5 diff
(99.1 %id)
BU848715 ovary, teratocarcinoma, cell line .a 2040 to 2362 111 to 432   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 322/432
(74 %)
10 diff
(97.7 %id)
AW264490 brain, three pooled meningiomas .a 2049 to 2357 307 to 1       307/307
(100 %)
1 diff
(99.7 %id)
BE090517 breast .a 2069 to 2317 264 to 18     Submitted on the opposite strand 247/264
(93 %)
0 diff
(100 %id)
N93586.
matches multiple genes
lung .a 2070 to 2356 306 to 12   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base), also hits gene SHBandMCART1andEXOSC3 295/344
(85 %)
6 diff
(98.3 %id)
BF511894   .a 2074 to 2356 302 to 18   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 285/295
(96 %)
8 diff
(97.3 %id)
AA111975   .a 2076 to 2349 276 to 1   fully sequenced,   276/276
(100 %)
5 diff
(98.2 %id)
CB069671 Pancreas, Purified pancreatic islet .a 2083 to 2366 288 to 5       284/290
(97 %)
0 diff
(100 %id)
BM850579 stomach .a 2088 to 2363 1 to 276       276/278
(99 %)
1 diff
(99.7 %id)
AW014985   .a 2100 to 2363 282 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 264/269
(98 %)
0 diff
(100 %id)
AW970792   .a 2109 to 2355 247 to 1     Submitted on the opposite strand 247/330
(74 %)
4 diff
(98.8 %id)
F27436 pectoral muscle (after mastectomy) .a 2112 to 2366 1 to 256       256/256
(100 %)
1 diff
(99.7 %id)
AA947336 2 pooled tumors (clear cell type), Kidney .a 2114 to 2363 253 to 4       250/253
(98 %)
0 diff
(100 %id)
F15843 pectoral muscle (after mastectomy) .a 2124 to 2363 1 to 240       240/241
(99 %)
3 diff
(98.8 %id)
H89338 cochlea, ear .a 2126 to 2356 1 to 231       231/233
(99 %)
3 diff
(98.8 %id)
BI335083 cervical carcinoma cell line, cervix .a 2143 to 2363 1 to 221   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 221/221
(100 %)
3 diff
(98.7 %id)
AA563626 colon .a 2150 to 2356 207 to 1       207/207
(100 %)
0 diff
(100 %id)
GD150427   .a 2196 to 2363 1 to 169   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 169/169
(100 %)
6 diff
(96.5 %id)
EC447460 Prostate .a 2200 to 2293 8 to 99       92/99
(92 %)
6 diff
(94.0 %id)
F17712 pectoral muscle (after mastectomy) .a 2213 to 2362 1 to 151       151/155
(97 %)
4 diff
(97.5 %id)
BE546579 cervical carcinoma cell line, cervix .a 2226 to 2359 1 to 134       134/134
(100 %)
0 diff
(100 %id)
EC545000 Prostate .a 2257 to 2355 103 to 8       96/103
(93 %)
0 diff
(100 %id)
C21074   .a 2301 to 2364 1 to 64       64/64
(100 %)
0 diff
(100 %id)
D25579   .a 2301 to 2366 1 to 66     Submitted on the opposite strand 66/67
(98 %)
1 diff
(98.6 %id)
Z43826 brain, total brain .a 2471 to 2781 1 to 311   tiling clone,   311/311
(100 %)
2 diff
(99.4 %id)
R18805 whole brain .a 2472 to 2828 1 to 358   tiling clone,   358/518
(69 %)
10 diff
(98.1 %id)
BX508617   .a 2975 to 3635 1 to 661   tiling clone,   661/661
(100 %)
3 diff
(99.6 %id)
BG983905 colon_normal .a 3071 to 3349 279 to 1   tiling clone,   279/290
(96 %)
1 diff
(99.7 %id)
BG185029   .a 3134 to 3819 764 to 76     Submitted on the opposite strand 689/817
(84 %)
0 diff
(100 %id)
BX089337 whole brain .a 3436 to 4045 624 to 15   tiling clone, AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 610/610
(100 %)
0 diff
(100 %id)
AW294145   .a 3463 to 4030 585 to 18   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 568/568
(100 %)
0 diff
(100 %id)
AW301678 Kidney .a 3525 to 4037 514 to 2       513/514
(99 %)
0 diff
(100 %id)
T03685   .a 3601 to 4045 443 to 1       443/451
(98 %)
3 diff
(99.4 %id)
R43915 whole brain .a 3633 to 4061 437 to 1       437/438
(99 %)
0 diff
(100 %id)
AI474780 Kidney .a 3674 to 4032 359 to 1       359/359
(100 %)
0 diff
(100 %id)
AI638687 pooled germ cell tumors .a 3692 to 4045 367 to 14   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 354/354
(100 %)
1 diff
(99.8 %id)
AI640288 Kidney .a 3699 to 4051 355 to 3       353/355
(99 %)
0 diff
(100 %id)
Z39891 brain, total brain .a 3767 to 4030 264 to 1       264/264
(100 %)
0 diff
(100 %id)
AI631760 Kidney .a 3768 to 4046 279 to 1   tiling clone,   279/279
(100 %)
0 diff
(100 %id)
BU165988 melanotic melanoma, skin .b 1 to 577 1 to 577 R167X R168K E169G W171V K172G ... tiling clone,   903/910
(99 %)
16 diff
(98.3 %id)
BM017991 astrocytoma grade IV, cell line, brain .b 28 to 769 1 to 752   tiling clone,   752/1027
(73 %)
35 diff
(96.6 %id)
TI_59388572   .b 29 to 769 107 to 857       751/1026
(73 %)
34 diff
(96.7 %id)
TI_154197677   .b 59 to 794 79 to 811   tiling clone,   733/948
(77 %)
10 diff
(99.0 %id)
BG398718 Kidney .c 1 to 726 1 to 714 F52L G53A W54G Q55S L56C ... tiling clone,   714/775
(92 %)
35 diff
(95.5 %id)
CN351528 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .d 1 to 701 13 to 713 exact tiling clone,   701/713
(98 %)
6 diff
(99.2 %id)
DA642213 Liver .e 1 to 589 5 to 593 exact tiling clone, capped   592/592
(100 %)
0 diff
(100 %id)
AW602857 breast .f 1 to 455 463 to 9 exact tiling clone,   455/463
(98 %)
5 diff
(99.0 %id)
H05096.
matches multiple genes
whole brain .f 368 to 751 402 to 11   tiling clone, AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base), also hits gene swuter 392/405
(96 %)
11 diff
(97.3 %id)
R44138.
matches multiple genes
whole brain .f 436 to 751 334 to 11   tiling clone, AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base), also hits gene swuter 324/352
(92 %)
6 diff
(98.3 %id)
Z38676.
matches multiple genes
brain, total brain .f 466 to 751 285 to 1     also hits gene swuter 285/285
(100 %)
2 diff
(99.3 %id)
CB128136 Liver .g 1 to 511 1 to 511 exact tiling clone,   511/511
(100 %)
0 diff
(100 %id)
AI609325 ovary, tumor, 5 pooled (see description) .h-u 1 to 388 388 to 1 exact tiling clone,   388/388
(100 %)
1 diff
(99.8 %id)
AW300032 Kidney .i 1 to 218 218 to 1 exact tiling clone,   218/218
(100 %)
0 diff
(100 %id)
BX647141 human small intestine Gene CMBL, variant not shown       available from DKFZ, AAA Suspected internal deletion, this clone was ignored    
DW436329 Liver Gene CMBL, variant not shown         This clone was ignored    
AV692982 hepatocellular carcinoma Gene CMBL, variant not shown         Suspected internal deletion, this clone was ignored    
AA421821 ovarian tumor, ovary Gene CMBL, variant not shown         This clone was ignored    
AA602984 normal prostate, Prostate Gene CMBL, variant not shown         This clone was ignored    
AI697735 carcinoid, lung Gene CMBL, variant not shown         Submitted on the opposite strand    
AW025245 Kidney Gene CMBL, variant not shown         This clone was ignored    
BI194441 epithelioid carcinoma cell line, Pancreas Gene CMBL, variant not shown         This clone was ignored    
BU507510 leiomyosarcoma, uterus Gene CMBL, variant not shown         This clone was ignored    
BP277269 Kidney Gene CMBL, variant not shown         This clone was ignored    
TI_154131709   Gene CMBL, variant not shown       AAA Suspected internal deletion, this clone was ignored    
AV755142 pituitary tumor Gene CMBL, variant not shown         Suspected internal deletion, this clone was ignored    
CA418182 Bone, Human Chondrosarcoma Cell Line Gene CMBL, variant not shown       AAA Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h-u, .i Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI