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Gene MUCL1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
40 supporting clones for gene MUCL1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BX487028   .a 1 to 491 1 to 492 exact tiling clone,   492/492
(100 %)
3 diff
(99.4 %id)
BG202312   .b 1 to 449 1 to 451 Y2D F3Y I4H Y5L W6L ... tiling clone, AAA   451/451
(100 %)
8 diff
(98.3 %id)
BG218084   .b 86 to 449 2 to 363   AAA   362/363
(99 %)
9 diff
(97.6 %id)
BG185269   .b 90 to 449 15 to 378   AAA   364/378
(96 %)
12 diff
(96.9 %id)
BG202313   .b 91 to 435 343 to 1     Submitted on the opposite strand 343/343
(100 %)
12 diff
(96.6 %id)
BG197186   .b 94 to 331 15 to 251       237/251
(94 %)
9 diff
(96.5 %id)
AW176044 breast .b 122 to 432 313 to 3       311/313
(99 %)
2 diff
(99.4 %id)
AW291950   .b 240 to 449 224 to 15   AAA   210/210
(100 %)
0 diff
(100 %id)
BG183176   .b 249 to 456 1 to 205       205/211
(97 %)
13 diff
(93.9 %id)
BG192597   .b 257 to 456 9 to 206       198/212
(93 %)
10 diff
(95.3 %id)
BG207535   .b 262 to 456 13 to 205       193/211
(91 %)
10 diff
(95.3 %id)
BP391606 pancreatic islet .c 1 to 497 1 to 499 exact tiling clone, Submitted on the opposite strand 499/500
(99 %)
4 diff
(99.2 %id)
AI905624 breast .c 12 to 203 1 to 193       193/193
(100 %)
1 diff
(99.5 %id)
NM_058173.2   .c 12 to 498 1 to 487 exact RefSeq, AAA   487/487
(100 %)
0 diff
(100 %id)
AI905687 breast .c 13 to 287 18 to 292       275/308
(89 %)
10 diff
(96.8 %id)
AI905837 breast .c 13 to 225 224 to 8       221/224
(98 %)
2 diff
(99.2 %id)
BP314595 mammary gland .c 13 to 496 1 to 484 exact tiling clone, AAA   484/484
(100 %)
2 diff
(99.6 %id)
BE815819 breast_normal .c 17 to 236 1 to 220       220/230
(95 %)
4 diff
(98.3 %id)
AI905623 breast .c 26 to 189 178 to 16       163/178
(91 %)
1 diff
(99.5 %id)
BF742809 breast .c 30 to 439 11 to 420 A44V     410/423
(96 %)
11 diff
(97.4 %id)
AA340069 epithelium, skin .c 34 to 327 1 to 294       294/294
(100 %)
1 diff
(99.7 %id)
AF414087 normal breast tissue and breast tumor .c 34 to 429 1 to 396 exact     396/396
(100 %)
1 diff
(99.8 %id)
R75793 breast .c 40 to 430 1 to 402 V8X R87*     402/403
(99 %)
18 diff
(95.6 %id)
BQ013778 placenta .c 40 to 498 473 to 16 exact AAA   458/466
(98 %)
2 diff
(99.6 %id)
BQ012550 placenta .c 40 to 498 475 to 17 exact AAA   459/472
(97 %)
1 diff
(99.8 %id)
BQ013284 placenta .c 40 to 498 477 to 19 exact AAA   459/472
(97 %)
2 diff
(99.6 %id)
AY359062   .c 41 to 498 1 to 458 exact AAA   458/458
(100 %)
1 diff
(99.8 %id)
W72837 heart .c 41 to 475 1 to 436 exact fully sequenced,   436/436
(100 %)
3 diff
(99.4 %id)
BC111421 PCR rescued clones .c 47 to 402 1 to 356 exact     356/356
(100 %)
1 diff
(99.8 %id)
BE074512 breast .c 47 to 258 217 to 6     Submitted on the opposite strand 212/221
(95 %)
5 diff
(97.8 %id)
AI905633 breast .c 58 to 192 135 to 1       135/136
(99 %)
0 diff
(100 %id)
BE092421 breast .c 70 to 408 345 to 7 exact   Submitted on the opposite strand 339/345
(98 %)
1 diff
(99.8 %id)
BE815824 breast_normal .c 74 to 284 32 to 241       208/248
(83 %)
16 diff
(93.6 %id)
BE186013 head_neck .c 86 to 401 1 to 316       316/316
(100 %)
10 diff
(96.9 %id)
BE926938 breast .c 86 to 401 1 to 316       316/316
(100 %)
10 diff
(96.9 %id)
AW070916 breast, four pooled high-grade tumors, including twoprimary tumors and two metastatic to ovary .c 90 to 496 420 to 14   AAA   407/407
(100 %)
2 diff
(99.6 %id)
FN063843 breast carcinoma .c 95 to 189 96 to 2     Submitted on the opposite strand 95/96
(98 %)
0 diff
(100 %id)
AI139456 heart .c 98 to 497 402 to 3       400/402
(99 %)
4 diff
(99.1 %id)
W72838 heart .c 148 to 496 350 to 1   fully sequenced,   348/348
(100 %)
2 diff
(99.5 %id)
DA245687 brain .d 1 to 591 2 to 592 exact tiling clone, to resequence, capped   591/591
(100 %)
2 diff
(99.7 %id)
DB306108 brain .d 1306 to 1799 494 to 1   tiling clone, to resequence,   494/494
(100 %)
2 diff
(99.6 %id)
AY651259   Gene MUCL1, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes D