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Gene CNTROBTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
254 supporting clones for gene CNTROB back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
CN390730 embryonic stem cells, DMSO-treated H9 cellline CNTROB.a 1 to 395 1 to 395   tiling clone,   395/395
(100 %)
0 diff
(100 %id)
BQ049042 lymph, lymphoma, cell line CNTROB.a 8 to 934 12 to 943   tiling clone,   932/1008
(92 %)
6 diff
(99.5 %id)
AY160227   CNTROB.a 32 to 3801 1 to 3764 exact tiling clone, AAA   3764/3764
(100 %)
3 diff
(100.0 %id)
NM_001037144.4   CNTROB.a 32 to 3801 1 to 3764 exact RefSeq, AAA   3764/3764
(100 %)
2 diff
(100.0 %id)
DR002446 fetal brain CNTROB.a 59 to 454 1 to 390       390/390
(100 %)
9 diff
(97.7 %id)
DB052544 testis CNTROB.a 65 to 642 2 to 574   capped   573/573
(100 %)
3 diff
(99.5 %id)
BX956949   CNTROB.a 78 to 799 1 to 716       716/716
(100 %)
7 diff
(99.1 %id)
DB281481 uterus CNTROB.a 83 to 624 2 to 538   capped   537/537
(100 %)
3 diff
(99.5 %id)
DB462532 testis CNTROB.a 85 to 566 1 to 476       476/476
(100 %)
4 diff
(99.2 %id)
DA952946 Spleen CNTROB.a 86 to 641 2 to 553   tiling clone, capped   552/552
(100 %)
8 diff
(98.6 %id)
DA532865 brain CNTROB.a 98 to 639 2 to 537   capped   536/536
(100 %)
3 diff
(99.5 %id)
CN390733 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells CNTROB.a 100 to 718 1 to 614       614/614
(100 %)
8 diff
(98.7 %id)
BM012231 brain, neuroblastoma, cell line CNTROB.a 102 to 624 1 to 547       547/817
(66 %)
6 diff
(99.3 %id)
TI_59381435   CNTROB.a 103 to 624 133 to 678       546/816
(66 %)
6 diff
(99.3 %id)
BG771894 testis CNTROB.a 107 to 988 1 to 878       878/878
(100 %)
31 diff
(96.5 %id)
AL558225 T cells from T cell leukemia CNTROB.a 112 to 1144 1 to 1019       1019/1069
(95 %)
6 diff
(99.5 %id)
DB448488 testis CNTROB.a 112 to 537 1 to 424       424/424
(100 %)
27 diff
(93.7 %id)
BU855394 ovary, teratocarcinoma, cell line CNTROB.a 123 to 841 39 to 762       724/950
(76 %)
10 diff
(99.0 %id)
BG760789 melanotic melanoma, high MDR (cell line), skin CNTROB.a 125 to 863 1 to 745       745/901
(82 %)
7 diff
(99.3 %id)
BG764053 melanotic melanoma, high MDR (cell line), skin CNTROB.a 125 to 837 1 to 708       708/708
(100 %)
16 diff
(97.8 %id)
BG764949 melanotic melanoma, high MDR (cell line), skin CNTROB.a 125 to 689 1 to 562       562/878
(64 %)
35 diff
(96.1 %id)
BU845315 ovary, teratocarcinoma, cell line CNTROB.a 129 to 1048 1 to 920       920/929
(99 %)
8 diff
(99.2 %id)
BU855900 ovary, teratocarcinoma, cell line CNTROB.a 129 to 999 1 to 875       875/953
(91 %)
22 diff
(97.7 %id)
BU931227 ovary, teratocarcinoma, cell line CNTROB.a 129 to 996 1 to 866       866/871
(99 %)
9 diff
(99.0 %id)
CN390729 embryonic stem cells, cell lines H1, H7, andH9 CNTROB.a 130 to 868 1 to 732       732/732
(100 %)
7 diff
(99.1 %id)
CN390735 embryonic stem cells, cell lines H1, H7, andH9 CNTROB.a 134 to 878 1 to 739       739/739
(100 %)
2 diff
(99.8 %id)
BM473620 duodenal adenocarcinoma, cell line, small intestine CNTROB.a 141 to 893 1 to 773       773/1194
(64 %)
37 diff
(97.0 %id)
BG910357 anaplastic oligodendroglioma with 1p/19qloss, brain CNTROB.a 149 to 911 1 to 757       757/758
(99 %)
6 diff
(99.3 %id)
BG393115 embryonal carcinoma, cell line, testis CNTROB.a 156 to 962 10 to 812       803/971
(82 %)
30 diff
(97.0 %id)
CX872583 embryonic stem CNTROB.a 156 to 903 1 to 742       742/742
(100 %)
6 diff
(99.2 %id)
AL041871 testis CNTROB.a 178 to 654 1 to 471       471/471
(100 %)
2 diff
(99.6 %id)
CN390734 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells CNTROB.a 256 to 968 1 to 707       707/707
(100 %)
3 diff
(99.6 %id)
BE889655 leiomyosarcoma, uterus CNTROB.a 258 to 1038 1 to 780       780/899
(86 %)
36 diff
(96.0 %id)
AA054779 uterus CNTROB.a 299 to 632 16 to 343       328/343
(95 %)
6 diff
(98.3 %id)
DN999246   CNTROB.a 318 to 937 9 to 622       614/623
(98 %)
7 diff
(98.9 %id)
CD171593 testis CNTROB.a 377 to 1219 1 to 837       837/843
(99 %)
8 diff
(99.1 %id)
BE729479 melanotic melanoma, skin CNTROB.a 421 to 1162 1 to 741       741/1219
(60 %)
29 diff
(97.7 %id)
BM929373 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid CNTROB.a 442 to 1102 1 to 661       661/661
(100 %)
2 diff
(99.7 %id)
TI_151759953   CNTROB.a 442 to 1106 713 to 50       664/1017
(65 %)
0 diff
(100 %id)
BQ924030 epidermoid carcinoma, cell line, lung CNTROB.a 471 to 1233 1 to 768       768/955
(80 %)
10 diff
(99.0 %id)
BG770553 melanotic melanoma, high MDR (cell line), skin CNTROB.a 514 to 864 400 to 754       735/757
(97 %)
23 diff
(97.0 %id)
BG900431 cartilage CNTROB.a 570 to 896 81 to 407       327/344
(95 %)
6 diff
(98.3 %id)
BM012131 brain, neuroblastoma, cell line CNTROB.a 576 to 1367 1 to 797       797/798
(99 %)
23 diff
(97.2 %id)
BQ706760 Spleen CNTROB.a 577 to 1393 1 to 820       820/831
(98 %)
5 diff
(99.4 %id)
TI_59381331   CNTROB.a 577 to 1367 102 to 897       796/797
(99 %)
22 diff
(97.3 %id)
BQ212104 large cell carcinoma, lung CNTROB.a 675 to 1346 1 to 679       675/811
(83 %)
12 diff
(98.6 %id)
AA054591 uterus CNTROB.a 710 to 1206 511 to 1       511/511
(100 %)
16 diff
(96.9 %id)
AI090055 uterus CNTROB.a 732 to 1206 475 to 1       475/475
(100 %)
0 diff
(100 %id)
BQ380262 uterus_tumor CNTROB.a 734 to 1069 351 to 18       334/351
(95 %)
0 diff
(100 %id)
CN390732 embryonic stem cells, cell lines H1, H7, andH9 CNTROB.a 734 to 1393 1 to 660       660/664
(99 %)
3 diff
(99.6 %id)
CO398724 Chondrosarcoma Lung Metastasis cell lines, lung CNTROB.a 775 to 1524 8 to 750       743/828
(89 %)
19 diff
(97.8 %id)
BF768473 epid_tumor CNTROB.a 828 to 1293 468 to 8     Submitted on the opposite strand 461/485
(95 %)
0 diff
(100 %id)
BX349084   CNTROB.a 838 to 1233 1 to 402       402/402
(100 %)
21 diff
(94.8 %id)
BQ313190 breast_normal CNTROB.a 875 to 1200 1 to 324       324/324
(100 %)
16 diff
(95.1 %id)
BE817844 breast_normal CNTROB.a 887 to 1211 1 to 326       326/326
(100 %)
9 diff
(97.3 %id)
TI_1948218738   CNTROB.a 951 to 1481 119 to 653       535/1427
(37 %)
14 diff
(99.1 %id)
TI_1948218739   CNTROB.a 951 to 1884 124 to 1054       931/1366
(68 %)
16 diff
(98.9 %id)
TI_1948218968   CNTROB.a 951 to 1676 120 to 845       726/1408
(51 %)
23 diff
(98.4 %id)
TI_1948218969   CNTROB.a 951 to 1891 121 to 1062       942/1355
(69 %)
20 diff
(98.6 %id)
TI_1948219226   CNTROB.a 951 to 1666 118 to 834       717/1340
(53 %)
19 diff
(98.6 %id)
TI_1948219227   CNTROB.a 951 to 1883 120 to 1048   AAA   929/1321
(70 %)
20 diff
(98.5 %id)
TI_1948219460   CNTROB.a 951 to 1784 120 to 959       840/1407
(59 %)
28 diff
(98.1 %id)
TI_1948219461   CNTROB.a 951 to 1874 122 to 1045       924/1376
(67 %)
18 diff
(98.7 %id)
EL735282 mixed CNTROB.a 957 to 1550 1 to 594       594/597
(99 %)
4 diff
(99.4 %id)
BE778439 eye, retinoblastoma CNTROB.a 960 to 1658 1 to 698       698/894
(78 %)
24 diff
(97.4 %id)
BU844407 ovary, teratocarcinoma, cell line CNTROB.a 961 to 1883 1 to 929       929/929
(100 %)
10 diff
(99.0 %id)
BQ313191 breast_normal CNTROB.a 981 to 1374 405 to 14       392/405
(96 %)
7 diff
(98.3 %id)
BG472415 eye, retinoblastoma CNTROB.a 998 to 1182 7 to 201       195/201
(97 %)
6 diff
(97.1 %id)
BF433452 carcinoid, lung CNTROB.a 999 to 1210 212 to 1       212/212
(100 %)
2 diff
(99.1 %id)
BG991584 head_neck CNTROB.a 1035 to 1495 1 to 461       461/461
(100 %)
2 diff
(99.6 %id)
BI821695 pooled brain, lung, testis CNTROB.a 1049 to 1859 1 to 829       781/1033
(75 %)
36 diff
(96.6 %id)
TI_57199215   CNTROB.a 1049 to 1737 99 to 799       699/1131
(61 %)
28 diff
(97.6 %id)
BG758826 B-cells, primary B-cells from tonsils (cell line) CNTROB.a 1154 to 2066 1 to 923       923/930
(99 %)
42 diff
(95.5 %id)
BE065713 breast CNTROB.a 1215 to 1435 1 to 221       221/241
(91 %)
10 diff
(95.9 %id)
BE065752 breast CNTROB.a 1220 to 1635 1 to 415       415/428
(96 %)
9 diff
(97.9 %id)
BE383174 brain, neuroblastoma CNTROB.a 1272 to 1970 1 to 699   available from MGC,   699/726
(96 %)
16 diff
(97.8 %id)
AW176060 breast CNTROB.a 1297 to 1536 239 to 1       239/239
(100 %)
4 diff
(98.4 %id)
BE273135 Kidney, renal cell adenocarcinoma CNTROB.a 1312 to 1806 2 to 496       495/498
(99 %)
1 diff
(99.8 %id)
BE273222 Kidney, renal cell adenocarcinoma CNTROB.a 1312 to 1881 1 to 575       575/711
(80 %)
7 diff
(99.1 %id)
BQ064717 lymph, lymphoma, cell line CNTROB.a 1336 to 2207 1 to 879       879/979
(89 %)
38 diff
(96.2 %id)
AW383037 head_neck CNTROB.a 1362 to 1628 1 to 266       266/266
(100 %)
4 diff
(98.5 %id)
BE154438 head_neck CNTROB.a 1363 to 1586 17 to 240       225/249
(90 %)
11 diff
(95.6 %id)
BE154467 head_neck CNTROB.a 1365 to 1628 264 to 1     Submitted on the opposite strand 264/264
(100 %)
3 diff
(98.9 %id)
BF568177 epithelioid carcinoma cell line, Pancreas CNTROB.a 1406 to 2127 1 to 713       713/928
(76 %)
21 diff
(97.8 %id)
BI160479 epithelioid carcinoma cell line, Pancreas CNTROB.a 1406 to 2119 1 to 720       718/727
(98 %)
11 diff
(98.5 %id)
BU540723 epithelioid carcinoma cell line, Pancreas CNTROB.a 1409 to 1944 1 to 536       536/833
(64 %)
4 diff
(99.6 %id)
BU187922 leiomyosarcoma, uterus CNTROB.a 1428 to 2127 1 to 702       702/920
(76 %)
12 diff
(98.7 %id)
BQ327672 kidney_tumor CNTROB.a 1478 to 1665 230 to 44       187/230
(81 %)
0 diff
(100 %id)
BG822726 adenocarcinoma cell line, colon CNTROB.a 1517 to 2236 1 to 722       722/722
(100 %)
7 diff
(99.1 %id)
BG763550 melanotic melanoma, high MDR (cell line), skin CNTROB.a 1546 to 2251 1 to 717       717/827
(86 %)
19 diff
(97.8 %id)
BQ424485 eye, retinoblastoma CNTROB.a 1583 to 2391 1 to 821       821/852
(96 %)
16 diff
(98.2 %id)
T05701   CNTROB.a 1594 to 1944 373 to 24       350/373
(93 %)
2 diff
(99.5 %id)
BM469150 duodenal adenocarcinoma, cell line, small intestine CNTROB.a 1598 to 2397 1 to 817       815/976
(83 %)
21 diff
(97.9 %id)
BG118860 adenocarcinoma, cell line, Liver CNTROB.a 1648 to 2257 1 to 610       610/610
(100 %)
5 diff
(99.2 %id)
CN358577 embryonic stem cells, cell lines H1, H7, andH9 CNTROB.a 1653 to 2342 5 to 694       690/694
(99 %)
7 diff
(99.0 %id)
BI869006 adenocarcinoma, cell line, Liver CNTROB.a 1666 to 2268 1 to 611       611/678
(90 %)
22 diff
(96.8 %id)
TI_57230597   CNTROB.a 1666 to 2268 89 to 699       611/678
(90 %)
22 diff
(96.8 %id)
BI043605 ovary CNTROB.a 1702 to 2084 29 to 415       387/415
(93 %)
14 diff
(96.7 %id)
CF995713 mixed CNTROB.a 1710 to 2471 1 to 762       762/763
(99 %)
8 diff
(99.0 %id)
BM910758 astrocytoma grade IV, cell line, brain CNTROB.a 1741 to 2508 1 to 770       770/1106
(69 %)
27 diff
(97.6 %id)
BG471801 eye, retinoblastoma CNTROB.a 1754 to 2461 1 to 712       712/712
(100 %)
8 diff
(98.9 %id)
BG472500 eye, retinoblastoma CNTROB.a 1754 to 2338 1 to 587       587/720
(81 %)
4 diff
(99.5 %id)
BM147786 leukopheresis CNTROB.a 1783 to 2268 502 to 17       488/506
(96 %)
9 diff
(98.3 %id)
DC404957 thymus CNTROB.a 1824 to 2302 1 to 479       479/479
(100 %)
0 diff
(100 %id)
DA963059 stomach CNTROB.a 1825 to 2410 2 to 587   capped   586/586
(100 %)
1 diff
(99.9 %id)
BE939985 uterus_tumor CNTROB.a 1826 to 2464 643 to 4       637/664
(95 %)
28 diff
(95.8 %id)
DA281398 corpus callosum CNTROB.a 1826 to 2330 2 to 506   capped   505/505
(100 %)
0 diff
(100 %id)
BX642486   CNTROB.a 1826 to 2164 1 to 339       339/339
(100 %)
2 diff
(99.5 %id)
BG746345 adenocarcinoma cell line, colon CNTROB.a 1836 to 2493 1 to 659       659/659
(100 %)
2 diff
(99.7 %id)
BF974668 B-cells, primary B-cells from tonsils (cell line) CNTROB.a 1843 to 2647 1 to 808       808/1170
(69 %)
26 diff
(97.8 %id)
BU429028 lymph CNTROB.a 1852 to 2175 1 to 324       324/324
(100 %)
6 diff
(98.2 %id)
BF869406 lung_tumor CNTROB.a 1853 to 2082 238 to 12     Submitted on the opposite strand 227/243
(93 %)
7 diff
(97.2 %id)
TI_154149908   CNTROB.a 1859 to 2364 80 to 585       506/507
(99 %)
14 diff
(97.3 %id)
BQ378337 uterus_tumor CNTROB.a 1903 to 2467 576 to 1       576/577
(99 %)
29 diff
(95.0 %id)
BQ378336 uterus_tumor CNTROB.a 1928 to 2402 552 to 77       478/552
(86 %)
14 diff
(97.5 %id)
BE242887 leukopheresis CNTROB.a 2034 to 2284 251 to 1       251/251
(100 %)
1 diff
(99.7 %id)
CN358579 embryonic stem cells, DMSO-treated H9 cellline CNTROB.a 2069 to 2516 1 to 448       448/448
(100 %)
4 diff
(99.2 %id)
BG393721 embryonal carcinoma, cell line, testis CNTROB.a 2121 to 2937 1 to 803       803/809
(99 %)
25 diff
(97.0 %id)
BE698641 uterus_tumor CNTROB.a 2249 to 2402 164 to 11       154/164
(93 %)
0 diff
(100 %id)
BM927743 hepatocellular carcinoma, cell line, Liver CNTROB.a 2383 to 3329 1 to 949       949/1009
(94 %)
10 diff
(99.1 %id)
BQ650213 hepatocellular carcinoma, cell line, Liver CNTROB.a 2400 to 3290 17 to 912       896/912
(98 %)
19 diff
(98.0 %id)
BQ649230 hepatocellular carcinoma, cell line, Liver CNTROB.a 2400 to 2949 17 to 567       551/1016
(54 %)
14 diff
(98.7 %id)
BQ654000 hepatocellular carcinoma, cell line, Liver CNTROB.a 2400 to 3100 17 to 720       704/949
(74 %)
29 diff
(97.0 %id)
BX329162   CNTROB.a 2403 to 3022 623 to 5       619/893
(69 %)
10 diff
(98.9 %id)
BM018117 astrocytoma grade IV, cell line, brain CNTROB.a 2468 to 3345 1 to 744       716/868
(82 %)
47 diff
(94.6 %id)
TI_59388699   CNTROB.a 2468 to 3345 100 to 843       716/868
(82 %)
47 diff
(94.6 %id)
BM012730 brain, neuroblastoma, cell line CNTROB.a 2477 to 3335 1 to 860       860/860
(100 %)
19 diff
(97.8 %id)
TI_59381954   CNTROB.a 2477 to 3335 102 to 961       860/860
(100 %)
19 diff
(97.8 %id)
BG750879 eye, normal pigmented retinal epithelium CNTROB.a 2588 to 3385 127 to 945       817/946
(86 %)
33 diff
(96.6 %id)
CN358578 embryonic stem cells, cell lines H1, H7, andH9 CNTROB.a 2691 to 3449 1 to 760       760/760
(100 %)
2 diff
(99.8 %id)
BI063187 uterus_tumor CNTROB.a 2706 to 3160 455 to 1       455/463
(98 %)
3 diff
(99.4 %id)
BG390883 embryonal carcinoma, cell line, testis CNTROB.a 2787 to 3053 1 to 267       267/267
(100 %)
0 diff
(100 %id)
EC480905 Prostate CNTROB.a 2882 to 2986 1 to 105       105/105
(100 %)
0 diff
(100 %id)
BF568900 epithelioid carcinoma cell line, Pancreas CNTROB.a 2983 to 3747 743 to 1       583/1072
(54 %)
72 diff
(93.3 %id)
AA372287   CNTROB.a 2996 to 3255 1 to 260       260/260
(100 %)
6 diff
(97.7 %id)
BF769113 epid_tumor CNTROB.a 3019 to 3165 164 to 19     Submitted on the opposite strand 147/164
(89 %)
0 diff
(100 %id)
EC442452 Prostate CNTROB.a 3171 to 3268 1 to 97       97/105
(92 %)
3 diff
(97.2 %id)
EC460053 Prostate CNTROB.a 3196 to 3306 1 to 109       109/112
(97 %)
5 diff
(95.6 %id)
BP395711 pancreatic islet CNTROB.a 3574 to 3791 1 to 219     Submitted on the opposite strand 219/219
(100 %)
1 diff
(99.6 %id)
CD358090 testis CNTROB.b 1 to 765 1 to 767   tiling clone,   767/867
(88 %)
23 diff
(97.4 %id)
BX437162 thymus CNTROB.b 217 to 911 1 to 689   tiling clone,   689/689
(100 %)
4 diff
(99.5 %id)
CX869553 embryonic stem CNTROB.b 877 to 1595 1 to 719   tiling clone,   719/719
(100 %)
0 diff
(100 %id)
BC014055 Brain, neuroblastoma CNTROB.b 977 to 3462 1 to 2486   tiling clone, available from MGC, AAA   2486/2486
(100 %)
0 diff
(100 %id)
BX437161 thymus CNTROB.b 2644 to 3402 760 to 1       760/837
(90 %)
14 diff
(98.4 %id)
BM014289 breast, mammary adenocarcinoma, cell line CNTROB.b 2814 to 3357 64 to 624       559/625
(89 %)
47 diff
(92.5 %id)
TI_59392284   CNTROB.b 2814 to 3357 153 to 713       559/625
(89 %)
47 diff
(92.5 %id)
W30782 senescent fibroblast CNTROB.b 2889 to 3224 29 to 363   fully sequenced,   335/363
(92 %)
7 diff
(98.1 %id)
CX869476 embryonic stem CNTROB.b 2901 to 3462 588 to 27   AAA   562/562
(100 %)
3 diff
(99.5 %id)
BM687982 eye, human retina CNTROB.b 2937 to 3462 1 to 527   fully sequenced, AAA   527/527
(100 %)
3 diff
(99.5 %id)
AI668799 Prostate CNTROB.b 3024 to 3462 450 to 12   AAA   439/443
(99 %)
0 diff
(100 %id)
AI376821 pooled CNTROB.b 3029 to 3461 433 to 1       433/433
(100 %)
0 diff
(100 %id)
N94435 senescent fibroblast CNTROB.b 3163 to 3463 309 to 6   tiling clone, fully sequenced,   304/309
(98 %)
1 diff
(99.7 %id)
AI831530 2 pooled tumors (clear cell type), Kidney CNTROB.b 3166 to 3461 309 to 14   AAA   296/296
(100 %)
5 diff
(98.4 %id)
AI042374 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus CNTROB.b 3191 to 3461 287 to 17   AAA   271/271
(100 %)
6 diff
(97.8 %id)
BG181741   CNTROB.b 3193 to 3463 1 to 271       271/274
(98 %)
4 diff
(98.6 %id)
BU726686 eye, human retina CNTROB.b 3216 to 3462 265 to 19   fully sequenced, AAA   247/247
(100 %)
0 diff
(100 %id)
AY160226   CNTROB.c 1 to 3704 1 to 3698 exact tiling clone, AAA   3698/3698
(100 %)
3 diff
(100.0 %id)
NM_053051.2   CNTROB.c 1 to 3704 1 to 3698 exact RefSeq, AAA   3698/3698
(100 %)
2 diff
(100.0 %id)
AK293076 uterus CNTROB.c 51 to 3704 1 to 3648 Q111L A288V R359W     3648/3648
(100 %)
5 diff
(99.9 %id)
AL535211 brain, fetal brain CNTROB.c 56 to 1161 1 to 1103       1103/1131
(97 %)
8 diff
(99.3 %id)
AF331638   CNTROB.c 65 to 3704 1 to 3635 R531Q AAA   3635/3635
(100 %)
5 diff
(99.9 %id)
BC021134 Skin, melanotic melanoma, high MDR. CNTROB.c 95 to 3704 1 to 3604 exact available from MGC, AAA   3604/3604
(100 %)
2 diff
(100.0 %id)
AL833907 testis CNTROB.c 147 to 3704 1 to 3552 exact available from DKFZ, AAA   3552/3552
(100 %)
3 diff
(100.0 %id)
BU949941 Pancreas, Purified pancreatic islet CNTROB.c 2023 to 2630 1 to 608       608/608
(100 %)
1 diff
(99.9 %id)
BF688515 eye, normal pigmented retinal epithelium CNTROB.c 2558 to 3165 1 to 603   fully sequenced,   603/603
(100 %)
5 diff
(99.2 %id)
TI_1948219229   CNTROB.c 2651 to 3636 1127 to 137       991/1381
(71 %)
39 diff
(97.2 %id)
AL565825 brain, fetal brain CNTROB.c 2656 to 3511 1020 to 162       859/1086
(79 %)
23 diff
(97.9 %id)
TI_1948218741   CNTROB.c 2656 to 3636 1122 to 129       994/1319
(75 %)
38 diff
(97.2 %id)
TI_1948218971   CNTROB.c 2656 to 3636 1110 to 137       974/1315
(74 %)
32 diff
(97.6 %id)
TI_1948218970   CNTROB.c 2657 to 3636 1106 to 126       981/1195
(82 %)
23 diff
(98.1 %id)
TI_1948219462   CNTROB.c 2657 to 3636 1114 to 123       992/1199
(82 %)
32 diff
(97.4 %id)
TI_1948218740   CNTROB.c 2662 to 3636 1094 to 125       970/1180
(82 %)
18 diff
(98.5 %id)
TI_1948219463   CNTROB.c 2664 to 3636 1099 to 129       971/1300
(74 %)
19 diff
(98.6 %id)
TI_1948219228   CNTROB.c 2672 to 3636 1102 to 126       977/1218
(80 %)
23 diff
(98.2 %id)
BU169117 ductal carcinoma, cell line, Pancreas CNTROB.c 2703 to 3553 1 to 859       857/863
(99 %)
12 diff
(98.7 %id)
CR601905 Neuroblastoma Cot 25-normalized CNTROB.c 2773 to 3685 1 to 913       913/913
(100 %)
0 diff
(100 %id)
BX366538 Neuroblastoma Cot 25-normalized CNTROB.c 2773 to 3336 1 to 563   fully sequenced,   563/563
(100 %)
3 diff
(99.5 %id)
BQ668796 epidermoid carcinoma, cell line, salivary gland CNTROB.c 2869 to 3704 1 to 840   AAA   840/840
(100 %)
24 diff
(97.2 %id)
TI_159705692   CNTROB.c 2922 to 3704 817 to 38   AAA   780/1000
(78 %)
22 diff
(97.8 %id)
BM989814 lung, Lung Focal Fibrosis CNTROB.c 3064 to 3704 661 to 19   AAA   643/643
(100 %)
2 diff
(99.7 %id)
BQ773018 Chondrosarcoma Cell line CNTROB.c 3065 to 3704 658 to 19   AAA   640/640
(100 %)
0 diff
(100 %id)
BX097118 breast CNTROB.c 3104 to 3704 1 to 601   AAA   601/601
(100 %)
0 diff
(100 %id)
R50286 breast CNTROB.c 3104 to 3379 1 to 279   fully sequenced,   279/279
(100 %)
4 diff
(98.6 %id)
BF689166 eye, normal pigmented retinal epithelium CNTROB.c 3104 to 3650 551 to 1   fully sequenced,   551/551
(100 %)
19 diff
(96.6 %id)
BU949655 Pancreas, Purified pancreatic islet CNTROB.c 3191 to 3703 516 to 4       513/516
(99 %)
0 diff
(100 %id)
BI324961 Pancreas, Purified pancreatic islet CNTROB.c 3208 to 3703 500 to 5       496/500
(99 %)
0 diff
(100 %id)
AW470870 2 pooled tumors (clear cell type), Kidney CNTROB.c 3270 to 3705 441 to 6       436/441
(98 %)
0 diff
(100 %id)
BP395506 pancreatic islet CNTROB.c 3274 to 3705 1 to 432     Submitted on the opposite strand 432/438
(98 %)
2 diff
(99.6 %id)
AW418858 2 pooled tumors (clear cell type), Kidney CNTROB.c 3274 to 3705 435 to 4       432/435
(99 %)
0 diff
(100 %id)
BX366537 Neuroblastoma Cot 25-normalized CNTROB.c 3275 to 3685 411 to 1   fully sequenced,   411/411
(100 %)
2 diff
(99.6 %id)
AA524046 colon CNTROB.c 3285 to 3705 419 to 1       419/427
(98 %)
8 diff
(98.2 %id)
BQ723526 sympathetic trunk CNTROB.c 3313 to 3704 1 to 392   AAA   392/392
(100 %)
1 diff
(99.8 %id)
AI650596 pooled germ cell tumors CNTROB.c 3323 to 3705 383 to 1       383/383
(100 %)
2 diff
(99.5 %id)
AA922255 pooled CNTROB.c 3336 to 3705 372 to 4       369/372
(99 %)
1 diff
(99.8 %id)
R50742 breast CNTROB.c 3349 to 3704 358 to 1   fully sequenced,   358/358
(100 %)
4 diff
(98.9 %id)
AI917429 pooled germ cell tumors CNTROB.c 3425 to 3705 281 to 1       281/281
(100 %)
0 diff
(100 %id)
BG959879 colon CNTROB.c 3491 to 3699 223 to 15       209/223
(93 %)
0 diff
(100 %id)
BG959892 colon CNTROB.c 3491 to 3700 288 to 79       210/288
(72 %)
0 diff
(100 %id)
AW059701   CNTROB.c 3496 to 3704 209 to 1       209/209
(100 %)
1 diff
(99.6 %id)
BI596375 brain, hypothalamus CNTROB.d 1 to 792 1 to 807   tiling clone,   805/822
(97 %)
46 diff
(94.5 %id)
TI_45209233   CNTROB.d 2 to 792 86 to 891       804/906
(88 %)
49 diff
(94.6 %id)
BG473063 eye, retinoblastoma CNTROB.d 233 to 1021 7 to 795   tiling clone,   789/795
(99 %)
23 diff
(97.2 %id)
BG395604 eye, retinoblastoma CNTROB.d 770 to 1437 1 to 664   tiling clone,   664/664
(100 %)
4 diff
(99.4 %id)
BE256086 eye, retinoblastoma CNTROB.d 790 to 1270 1 to 480   tiling clone,   480/480
(100 %)
1 diff
(99.8 %id)
BQ373024 prostate_tumor CNTROB.d 899 to 1174 301 to 29       273/306
(89 %)
8 diff
(97.4 %id)
AK074847   CNTROB.d 1424 to 3884 1 to 2461   tiling clone, available from FLJ,   2461/2461
(100 %)
8 diff
(99.7 %id)
DA733964   CNTROB.d 1425 to 1890 2 to 466   capped   465/523
(88 %)
5 diff
(99.1 %id)
DB365972   CNTROB.d 3350 to 3884 536 to 1       536/587
(91 %)
16 diff
(97.3 %id)
AI286179 pooled CNTROB.d 3385 to 3544 162 to 3       160/162
(98 %)
0 diff
(100 %id)
AI382473 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus CNTROB.d 3385 to 3544 160 to 1   tiling clone,   160/160
(100 %)
1 diff
(99.4 %id)
BQ070220 brain, neuroblastoma, cell line CNTROB.e 1 to 955 24 to 985   tiling clone,   961/991
(96 %)
31 diff
(96.9 %id)
BQ948852 brain, neuroblastoma, cell line CNTROB.e 2 to 460 1 to 462       462/814
(56 %)
7 diff
(99.2 %id)
BQ898258 brain, neuroblastoma, cell line CNTROB.e 2 to 767 1 to 770       770/863
(89 %)
6 diff
(99.4 %id)
BG765028 melanotic melanoma, high MDR (cell line), skin CNTROB.e 615 to 1489 1 to 870   tiling clone,   870/947
(91 %)
26 diff
(97.3 %id)
AL137669 testis CNTROB.f 1 to 2959 1 to 2959 exact tiling clone, available from DKFZ, AAA   2959/2959
(100 %)
1 diff
(100.0 %id)
BM127046 Islets of Langerhans, Pancreas CNTROB.f 1972 to 2497 1 to 526       526/526
(100 %)
0 diff
(100 %id)
BF877649 lung_tumor CNTROB.f 2049 to 2173 1 to 125       125/125
(100 %)
3 diff
(97.6 %id)
TI_149303730   CNTROB.f 2061 to 2964 975 to 90   AAA   886/969
(91 %)
33 diff
(96.6 %id)
BM981682 lung, Primary Lung Cystic Fibrosis EpithelialCells CNTROB.f 2258 to 2964 724 to 17   AAA   708/708
(100 %)
4 diff
(99.5 %id)
BF829818 head_normal CNTROB.f 2474 to 2635 181 to 20     Submitted on the opposite strand 162/190
(85 %)
0 diff
(100 %id)
AA310710   CNTROB.f 2498 to 2814 1 to 318       318/318
(100 %)
1 diff
(99.7 %id)
AW958280   CNTROB.f 2499 to 2959 1 to 462   AAA   462/462
(100 %)
1 diff
(99.8 %id)
H38422 brain CNTROB.f 2603 to 2943 341 to 1       341/341
(100 %)
4 diff
(98.9 %id)
AA632087 breast CNTROB.f 2666 to 2959 293 to 1       293/293
(100 %)
3 diff
(99.0 %id)
AI494457 anaplastic oligodendroglioma, brain CNTROB.f 2900 to 3301 402 to 1   tiling clone,   402/402
(100 %)
2 diff
(99.6 %id)
AK303093 thymus CNTROB.g 1 to 971 1 to 971   tiling clone,   971/971
(100 %)
0 diff
(100 %id)
BQ329607 lung_normal CNTROB.g 298 to 739 20 to 460       439/460
(95 %)
6 diff
(98.7 %id)
BM926473 pooled lung and spleen CNTROB.g 390 to 1429 12 to 1056   tiling clone,   1045/1106
(94 %)
19 diff
(98.3 %id)
BF924492 nervous_tumor CNTROB.g 445 to 867 429 to 8     Submitted on the opposite strand 422/429
(98 %)
0 diff
(100 %id)
BF848720 lung_normal CNTROB.g 642 to 736 97 to 3     Submitted on the opposite strand 95/108
(87 %)
0 diff
(100 %id)
BG987184 head_neck CNTROB.g 774 to 1296 1 to 522       522/522
(100 %)
20 diff
(96.2 %id)
CX752999 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass CNTROB.g 870 to 1333 34 to 501   tiling clone, Submitted on the opposite strand 463/501
(92 %)
6 diff
(98.9 %id)
AF141344   CNTROB.g 911 to 1297 1 to 386       386/386
(100 %)
3 diff
(99.3 %id)
AL580106 T cells from T cell leukemia CNTROB.g 1263 to 2091 826 to 1   tiling clone,   826/953
(86 %)
16 diff
(98.4 %id)
BM703719 eye, human retina CNTROB.g 1407 to 1967 1 to 561   tiling clone,   561/561
(100 %)
0 diff
(100 %id)
BM668466 eye, human retina CNTROB.g 1513 to 2119 626 to 19   AAA   608/608
(100 %)
2 diff
(99.7 %id)
AW291481   CNTROB.g 1708 to 2119 428 to 18   AAA   411/411
(100 %)
4 diff
(99.1 %id)
BU730127 eye, human retina CNTROB.g 1710 to 2119 428 to 19   tiling clone, AAA   410/410
(100 %)
0 diff
(100 %id)
TI_154185519   CNTROB.h 1 to 771 91 to 858 K192X Q217X Q229X Q233H R234G ... tiling clone,   768/1059
(72 %)
15 diff
(98.6 %id)
BX503937   CNTROB.i 1 to 652 1 to 652 S179N L196P tiling clone,   652/652
(100 %)
3 diff
(99.6 %id)
AW629311 pooled CNTROB.j 1 to 452 452 to 1   tiling clone,   452/452
(100 %)
1 diff
(99.8 %id)
BG388890 embryonal carcinoma, cell line, testis CNTROB.j 441 to 1232 1 to 783 P143Q D144T L145S T146L S147H ... tiling clone,   783/820
(95 %)
20 diff
(97.6 %id)
AA311536   CNTROB.j 599 to 1000 1 to 403       403/403
(100 %)
2 diff
(99.6 %id)
AI809546 pooled CNTROB.k 1 to 472 473 to 3 V9S P10L E11S P12L S14P ... tiling clone,   471/473
(99 %)
1 diff
(99.8 %id)
BF087021 head_neck CNTROB.k 46 to 459 29 to 443   tiling clone,   415/448
(92 %)
14 diff
(96.9 %id)
BG993127 head_neck CNTROB.l 1 to 370 378 to 6   tiling clone,   373/378
(98 %)
0 diff
(100 %id)
BQ954358 sciatic nerve CNTROB.l 53 to 946 8 to 907   tiling clone,   900/916
(98 %)
19 diff
(98.0 %id)
BF909446 uterus_tumor CNTROB.l 552 to 966 444 to 30 exact tiling clone, Submitted on the opposite strand 415/461
(90 %)
2 diff
(99.6 %id)
BF909309 uterus_tumor CNTROB.l 570 to 964 394 to 1     Submitted on the opposite strand 394/394
(100 %)
14 diff
(96.5 %id)
CN390731 embryonic stem cells, DMSO-treated H9 cellline CNTROB.m 1 to 757 1 to 752 exact tiling clone,   752/752
(100 %)
7 diff
(99.1 %id)
BF772975 epid_tumor CNTROB.m 420 to 831 1 to 414   tiling clone,   414/414
(100 %)
13 diff
(96.9 %id)
BQ376234 testis_normal CNTROB.m 522 to 850 1 to 332   tiling clone,   332/333
(99 %)
8 diff
(97.6 %id)
CB115243 Liver CNTROB.n-u 1 to 498 1 to 498 exact tiling clone,   498/498
(100 %)
2 diff
(99.6 %id)
AA329876   CNTROB.n-u 62 to 338 1 to 278       278/278
(100 %)
1 diff
(99.7 %id)
BF889108 testis_normal CNTROB.o-u 1 to 335 1 to 332 L6C P7L S8V T9L W10A ... tiling clone,   332/332
(100 %)
7 diff
(97.9 %id)
BI048598 testis_normal CNTROB.o-u 1 to 335 1 to 332 L6C P7L S8V T9L W10A ...     332/332
(100 %)
7 diff
(97.9 %id)
BE719339 head_neck CNTROB.p-u 1 to 290 10 to 298 K11* tiling clone,   289/298
(96 %)
6 diff
(98.0 %id)
BE719336 head_neck CNTROB.p-u 7 to 290 1 to 284   tiling clone,   284/284
(100 %)
7 diff
(97.6 %id)
BE242369 leukopheresis CNTROB.q-u 1 to 154 1 to 154 exact tiling clone,   154/154
(100 %)
3 diff
(98.1 %id)
AA347102 heart Gene CNTROB, variant not shown              
AA347982 heart Gene CNTROB, variant not shown              
T81367 liver and spleen Gene CNTROB, variant not shown         Suspected internal deletion, this clone was ignored    
AI338437   Gene CNTROB, variant not shown         Suspected internal deletion, this clone was ignored    
AI768983 pooled Gene CNTROB, variant not shown       AAA Suspected internal deletion, internal priming: the 3' end of the oligo dt primed clone lies in the CDS, this clone was ignored    
DB133625 thymus Gene CNTROB, variant not shown       capped      
DB344807 thymus Gene CNTROB, variant not shown              
TI_154092802   Gene CNTROB, variant not shown       AAA      
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n-u, .o-u, .p-u, .q-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI