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Gene LHX8TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
26 supporting clones for gene LHX8 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BC036423 Brain, hypothalamus .a 1 to 1762 7 to 1766 V54G S67F S68G A69H P70A ... tiling clone, available from MGC, AAA   1760/1766
(99 %)
20 diff
(98.9 %id)
BG709099 brain, hypothalamus .a 1 to 583 7 to 587   available from MGC,   581/587
(98 %)
12 diff
(98.0 %id)
BG772403 testis .b 1 to 747 1 to 747   tiling clone,   747/747
(100 %)
7 diff
(99.1 %id)
NM_001001933.1   .b 6 to 2376 1 to 2371 exact RefSeq, AAA   2371/2371
(100 %)
0 diff
(100 %id)
BC040321 testis .b 9 to 2376 4 to 2371 V297A tiling clone, available from MGC, AAA   2368/2368
(100 %)
2 diff
(100.0 %id)
TI_1948229704   .b 663 to 1184 129 to 651   fully sequenced,   523/651
(80 %)
6 diff
(99.1 %id)
TI_1948229865   .b 663 to 1089 130 to 556   fully sequenced,   427/556
(76 %)
6 diff
(99.0 %id)
TI_1948230025   .b 663 to 1184 122 to 643   fully sequenced,   522/643
(81 %)
6 diff
(99.1 %id)
TI_1948230177   .b 663 to 1310 130 to 778   fully sequenced,   649/778
(83 %)
7 diff
(99.2 %id)
EL737190 mixed .b 670 to 1263 1 to 594       594/594
(100 %)
0 diff
(100 %id)
TI_837040603   .b 688 to 1057 425 to 57       370/649
(57 %)
3 diff
(99.6 %id)
DR007906 pooled .b 689 to 1058 373 to 2     Submitted on the opposite strand 372/373
(99 %)
2 diff
(99.5 %id)
DR002427 fetal brain .b 783 to 1372 8 to 603       594/603
(98 %)
26 diff
(95.7 %id)
AA331573 Embryo, 8 weeks .b 797 to 1058 1 to 264       264/280
(94 %)
5 diff
(98.3 %id)
DN831210 pooled .b 837 to 1416 580 to 1     Submitted on the opposite strand 580/580
(100 %)
0 diff
(100 %id)
DN831209 pooled .b 900 to 1124 1 to 220       220/221
(99 %)
6 diff
(97.3 %id)
TI_1948229866   .b 1028 to 1739 835 to 124   fully sequenced,   712/835
(85 %)
1 diff
(99.9 %id)
TI_1948229705   .b 1154 to 1739 713 to 128   fully sequenced,   586/713
(82 %)
3 diff
(99.6 %id)
TI_1948230026   .b 1154 to 1739 710 to 125   fully sequenced,   586/710
(82 %)
1 diff
(99.9 %id)
TI_1948230178   .b 1249 to 1739 617 to 127   fully sequenced,   491/617
(79 %)
1 diff
(99.9 %id)
CR735202 melanotic melanoma, high MDR, skin .b 1301 to 1688 1 to 388       388/388
(100 %)
1 diff
(99.8 %id)
CR735617 epithelioid carcinoma cell line, Pancreas .b 1301 to 1695 1 to 395       395/395
(100 %)
1 diff
(99.8 %id)
BF572867 melanotic melanoma, high MDR, skin .b 1301 to 1968 1 to 665       665/806
(82 %)
14 diff
(98.3 %id)
BF978460 melanotic melanoma, high MDR, skin .b 1301 to 1967 1 to 667   tiling clone,   667/725
(92 %)
13 diff
(98.3 %id)
DB555268 hypothalamus .b 2053 to 2376 1 to 327     Submitted on the opposite strand 327/327
(100 %)
9 diff
(97.3 %id)
DB486283 hypothalamus .c 1 to 339 1 to 342 exact tiling clone,   342/364
(93 %)
6 diff
(98.4 %id)
DA571819 whole embryo, mainly head .d-u 1 to 847 2 to 847   tiling clone, capped   846/847
(99 %)
10 diff
(98.9 %id)
AK094667 amygdala .d-u 98 to 3097 1 to 3000 exact tiling clone, available from FLJ,   3000/3000
(100 %)
5 diff
(99.9 %id)
DA161497 amygdala .d-u 99 to 624 2 to 527   capped   526/535
(98 %)
3 diff
(99.5 %id)
DA568421 whole embryo, mainly head .d-u 987 to 1720 2 to 737   capped   736/747
(98 %)
8 diff
(99.0 %id)
DB358728 whole embryo, mainly head .d-u 2531 to 3097 573 to 1   tiling clone,   573/573
(100 %)
25 diff
(95.7 %id)
DB302169 amygdala .d-u 2535 to 3097 563 to 1       563/563
(100 %)
1 diff
(99.9 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C