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Gene KSR1andLGALS9TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
593 supporting clones for gene KSR1andLGALS9 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
C18591 placenta .e 1434 to 1780 15 to 355       341/368
(92 %)
21 diff
(94.3 %id)
AA758300   .e 2728 to 3016 310 to 22   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 289/289
(100 %)
0 diff
(100 %id)
AA295169 Pancreas .e 1553 to 1835 1 to 282       282/282
(100 %)
4 diff
(98.6 %id)
AA295767 Pancreas .e 1553 to 1835 1 to 282       282/282
(100 %)
5 diff
(98.3 %id)
AA327086 colon .e 2484 to 2712 1 to 230       230/230
(100 %)
1 diff
(99.6 %id)
AA327473 colon .e 2444 to 2674 1 to 230       230/230
(100 %)
1 diff
(99.6 %id)
AA352394   .e 2578 to 2823 1 to 246       246/246
(100 %)
1 diff
(99.6 %id)
AA353933   .e 1418 to 1787 1 to 370       370/370
(100 %)
2 diff
(99.5 %id)
AA354210   .e 1416 to 1740 1 to 326       326/326
(100 %)
1 diff
(99.7 %id)
AA354814   .e 1969 to 2235 1 to 269       269/274
(98 %)
5 diff
(98.2 %id)
AA360948   .e 2440 to 2700 1 to 261       261/261
(100 %)
0 diff
(100 %id)
AA379849 skin .b 2087 to 2339 1 to 254       254/254
(100 %)
2 diff
(99.3 %id)
AA382104   .e 1403 to 1563 1 to 161       161/161
(100 %)
1 diff
(99.4 %id)
AB003517 Kidney .e 1442 to 2466 1 to 1024 exact     1024/1024
(100 %)
2 diff
(99.9 %id)
AB005894   .e 1409 to 3010 1 to 1602 G5S     1602/1602
(100 %)
2 diff
(99.9 %id)
AB006782 gastric adenocarcinoma .d 38 to 1762 1 to 1725 exact tiling clone,   1725/1725
(100 %)
0 diff
(100 %id)
AB008492 stomach .d 93 to 1213 1 to 1120 exact     1120/1120
(100 %)
2 diff
(99.9 %id)
DA008443 adipose .e 1416 to 1969 10 to 563   capped   554/554
(100 %)
0 diff
(100 %id)
AJ714733 bone marrow .e 2295 to 2569 10 to 282       273/282
(96 %)
6 diff
(97.9 %id)
AK095721 brain .vd 2834 to 5132 1 to 2299   tiling clone, available from FLJ,   2299/2299
(100 %)
5 diff
(99.8 %id)
AK097892 thymus .vi 1 to 2951 1 to 2951 exact tiling clone, available from FLJ,   2951/2951
(100 %)
2 diff
(100.0 %id)
AK124344 uterus .vd 2232 to 5130 1 to 2899   tiling clone, available from FLJ,   2899/2899
(100 %)
3 diff
(99.9 %id)
AK126017 testis .e 1 to 3010 2 to 3011 G5S tiling clone, available from FLJ,   3011/3011
(100 %)
5 diff
(99.9 %id)
AK130719 synovial membrane (knee) .u 1 to 2527 1 to 2527 exact tiling clone, available from FLJ,   2527/2527
(100 %)
4 diff
(99.9 %id)
AK223232 stomach mucosa .e 1386 to 3010 1 to 1625 G5S F93S AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 1625/1625
(100 %)
5 diff
(99.7 %id)
AK296031 subthalamic nucleus .f 67 to 1093 9 to 1035 exact     1027/1027
(100 %)
0 diff
(100 %id)
AK301624 colon, tumor tissue .k 39 to 1504 1 to 1466 exact tiling clone,   1466/1466
(100 %)
1 diff
(100.0 %id)
AW373817 breast .d 94 to 719 17 to 641       625/665
(93 %)
13 diff
(98.1 %id)
AW393706 testis .e 2606 to 2863 271 to 18       254/281
(90 %)
0 diff
(100 %id)
AW577283 breast .vk-u 1 to 618 633 to 18   tiling clone,   616/633
(97 %)
0 diff
(100 %id)
AW798080 uterus .e 1749 to 2212 464 to 1       464/464
(100 %)
3 diff
(99.4 %id)
AW832712 testis .e 2663 to 2887 1 to 224       224/235
(95 %)
5 diff
(97.9 %id)
AW886539 ovary .d 346 to 1020 71 to 742       672/780
(86 %)
21 diff
(97.4 %id)
AW889016 nervous_tumor .e 1429 to 1654 1 to 225       225/226
(99 %)
9 diff
(96.1 %id)
AW892677 nervous_normal .vk-u 663 to 895 17 to 249   tiling clone,   233/250
(93 %)
6 diff
(97.6 %id)
AW958552   .e 1397 to 1943 1 to 545       545/545
(100 %)
28 diff
(94.9 %id)
AW963516   .b 2088 to 2682 1 to 594   tiling clone,   594/605
(98 %)
9 diff
(98.6 %id)
AW970670   .e 2544 to 3000 457 to 1     Submitted on the opposite strand 457/591
(77 %)
1 diff
(99.9 %id)
CB153323 brain .d 62 to 623 1 to 562       562/562
(100 %)
2 diff
(99.7 %id)
AU185274 skin .vd 4818 to 5130 313 to 1       313/313
(100 %)
3 diff
(99.1 %id)
BC105942 PCR rescued clones .e 1426 to 2551 1 to 1126 exact     1126/1126
(100 %)
0 diff
(100 %id)
BC105944 PCR rescued clones .e 1426 to 2551 1 to 1126 exact     1126/1126
(100 %)
0 diff
(100 %id)
BC110340 Colon, Kidney, Stomach, adult, whole pooled .e 1409 to 3016 1 to 1608 exact tiling clone, AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 1608/1608
(100 %)
0 diff
(100 %id)
BE715806 head_neck .b 3985 to 4259 284 to 11       274/292
(93 %)
6 diff
(98.0 %id)
BE925488 amnion_normal .b 2446 to 2732 294 to 5   tiling clone,   288/294
(97 %)
4 diff
(98.7 %id)
BE939411 uterus .e 1749 to 2212 464 to 1       464/464
(100 %)
3 diff
(99.4 %id)
BF378189 testis .e 2424 to 2868 451 to 6       446/466
(95 %)
0 diff
(100 %id)
BF820484 kidney_tumor .e 2002 to 2364 28 to 391       364/569
(63 %)
11 diff
(98.1 %id)
BF883378 lung_tumor .e 2128 to 2380 257 to 5     Submitted on the opposite strand 259/262
(98 %)
1 diff
(99.7 %id)
BF883646 lung_tumor .e 1965 to 2378 423 to 1     Submitted on the opposite strand 431/423
(101 %)
8 diff
(98.2 %id)
BF917612 uterus_tumor .e 2459 to 2676 218 to 1     Submitted on the opposite strand 218/218
(100 %)
3 diff
(98.7 %id)
BF917619 uterus_tumor .e 2569 to 2782 1 to 214       214/214
(100 %)
6 diff
(97.2 %id)
BF917622 uterus_tumor .e 2542 to 2871 1 to 330       330/330
(100 %)
7 diff
(97.9 %id)
BF917867 uterus_tumor .e 2459 to 2676 218 to 1     Submitted on the opposite strand 218/218
(100 %)
3 diff
(98.7 %id)
BF958292 nervous_normal .vd 1955 to 2397 444 to 1       444/444
(100 %)
1 diff
(99.8 %id)
BF985033 uterus .e 1749 to 2212 464 to 1       464/464
(100 %)
3 diff
(99.4 %id)
BF985804 placenta_normal .vd 4812 to 4999 194 to 8       187/227
(82 %)
0 diff
(100 %id)
BG007433 placenta_normal .vc-u -11 to 476 496 to 9 G41A tiling clone,   488/496
(98 %)
0 diff
(100 %id)
BG013442 placenta_normal .vd 3006 to 3191 10 to 198       189/207
(91 %)
10 diff
(95.2 %id)
BG314709   .e 2302 to 2405 106 to 1       106/106
(100 %)
5 diff
(95.3 %id)
BG951384 colon .ve-u 1 to 377 389 to 12 exact tiling clone,   378/389
(97 %)
0 diff
(100 %id)
BG960198 colon .d 260 to 745 524 to 39       485/525
(92 %)
11 diff
(98.0 %id)
BG984353 colon_normal .vk-u 189 to 668 498 to 15 Q36H Q37N P38H S40L C41V ... tiling clone,   484/498
(97 %)
0 diff
(100 %id)
BI008180 kidney_tumor .a 1 to 488 516 to 20   tiling clone,   497/517
(96 %)
0 diff
(100 %id)
BI008356 kidney_tumor .e 1482 to 1841 1 to 362       362/364
(99 %)
17 diff
(95.4 %id)
BI009427 kidney_tumor .e 1706 to 2122 1 to 419       419/419
(100 %)
23 diff
(94.6 %id)
BI016134 lung_tumor .e 2467 to 2974 511 to 5       507/512
(99 %)
0 diff
(100 %id)
BI016136 lung_tumor .e 2466 to 2954 1 to 488       488/488
(100 %)
6 diff
(98.8 %id)
BI016290 lung_tumor .vf 1 to 451 453 to 1 W19* tiling clone,   453/453
(100 %)
8 diff
(98.3 %id)
BI021736 marrow .e 1479 to 1856 1 to 380       380/380
(100 %)
11 diff
(97.2 %id)
BI028812 marrow .e 1736 to 2147 411 to 1       411/411
(100 %)
1 diff
(99.8 %id)
BI033612 nervous_normal .vk-u 765 to 1180 1 to 410   tiling clone,   410/410
(100 %)
14 diff
(96.6 %id)
BI059729 uterus_tumor .e 2459 to 2676 218 to 1       218/218
(100 %)
3 diff
(98.7 %id)
BQ299965 bladder_tumor .e 2536 to 2836 1 to 297       297/297
(100 %)
20 diff
(93.3 %id)
BQ300283 bladder_tumor .e 2536 to 2836 1 to 297       297/297
(100 %)
20 diff
(93.3 %id)
BQ324225 colon_ins .e 1766 to 2031 289 to 24       266/289
(92 %)
0 diff
(100 %id)
BQ327839 kidney_tumor .e 1715 to 2122 9 to 416       408/416
(98 %)
9 diff
(97.9 %id)
BQ331123 lung_tumor .e 1948 to 2383 436 to 2       441/443
(99 %)
2 diff
(99.6 %id)
BQ331323 lung_tumor .e 1999 to 2349 350 to 1       350/359
(97 %)
16 diff
(95.6 %id)
BQ695081 adipose .b 1747 to 2318 1 to 574   tiling clone,   574/574
(100 %)
9 diff
(98.5 %id)
DA067052 cerebellum .vd 2853 to 3334 2 to 483   capped   482/482
(100 %)
1 diff
(99.8 %id)
DA092047 cerebellum .vd 1679 to 2245 2 to 569   capped   568/568
(100 %)
3 diff
(99.5 %id)
DB298353 cerebellum .vd 4469 to 5030 562 to 1       562/562
(100 %)
1 diff
(99.9 %id)
DA115314 cerebellum .b 3727 to 4266 2 to 543   tiling clone, capped   542/542
(100 %)
4 diff
(99.3 %id)
DA155086 amygdala .t 178 to 747 2 to 572 exact tiling clone, capped   571/571
(100 %)
1 diff
(99.9 %id)
DA279453 corpus callosum .t 1 to 577 2 to 578 exact tiling clone, capped   577/577
(100 %)
0 diff
(100 %id)
DA313890 hippocampus .b 3787 to 4326 2 to 542   tiling clone, capped   541/541
(100 %)
1 diff
(99.9 %id)
DA328720 hippocampus .vn-u 1 to 472 2 to 473 exact tiling clone, capped   472/472
(100 %)
0 diff
(100 %id)
DA334407 hippocampus .p 1 to 592 6 to 597 exact tiling clone, capped   596/596
(100 %)
0 diff
(100 %id)
DA335663 hippocampus .vd 1 to 490 2 to 492   capped   491/491
(100 %)
1 diff
(99.8 %id)
DA339488 hippocampus .vd 1 to 575 2 to 576   tiling clone, capped   575/576
(99 %)
1 diff
(99.9 %id)
DA355043 subthalamic nucleus .e 1383 to 1922 2 to 541   capped   540/540
(100 %)
2 diff
(99.7 %id)
DC338877 subthalamic nucleus .f 67 to 553 9 to 495       487/487
(100 %)
0 diff
(100 %id)
DA384719 thalamus .vc-u 1 to 598 2 to 599 exact tiling clone, capped   598/598
(100 %)
3 diff
(99.5 %id)
DA384844 thalamus .r 112 to 676 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA407566 thalamus .m 1 to 552 2 to 553   tiling clone, capped   552/552
(100 %)
2 diff
(99.7 %id)
DA408586 thalamus .b 3008 to 3570 2 to 565   tiling clone, capped   564/564
(100 %)
2 diff
(99.7 %id)
DA415226 thalamus .vd 1991 to 2533 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
BX092295 ovarian tumor, ovary .e 2658 to 3015 1 to 358   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 358/358
(100 %)
0 diff
(100 %id)
BX092902 placenta .b 1323 to 1930 34 to 641       608/641
(94 %)
6 diff
(99.1 %id)
BX108666 pooled .a 2023 to 2505 1 to 483   tiling clone,   483/483
(100 %)
0 diff
(100 %id)
BX281937 lymph .d 349 to 830 1 to 482       482/482
(100 %)
0 diff
(100 %id)
C00739   .e 2539 to 2759 1 to 221       221/221
(100 %)
1 diff
(99.6 %id)
C02393   .vd 4866 to 5131 1 to 266   tiling clone,   266/266
(100 %)
0 diff
(100 %id)
C06470   .e 2591 to 3011 429 to 7       423/430
(98 %)
0 diff
(100 %id)
CB268574 adipose .b 1594 to 2024 1 to 431       431/431
(100 %)
0 diff
(100 %id)
DA419026 cord Blood .e 1416 to 1952 11 to 547   capped   537/537
(100 %)
1 diff
(99.9 %id)
DA419469 cord Blood .e 1391 to 1949 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
CD614549   .e 1444 to 2093 649 to 1       649/655
(99 %)
2 diff
(99.7 %id)
CD614550   .e 1438 to 2093 1 to 656       656/657
(99 %)
7 diff
(99.0 %id)
CD614551   .e 1494 to 2093 1 to 600       600/601
(99 %)
5 diff
(99.2 %id)
CD614552   .e 1494 to 2093 599 to 1       599/599
(100 %)
1 diff
(99.9 %id)
CN289935 embryonic stem cells, DMSO-treated H9 cellline .vq-u 50 to 494 1 to 445       445/445
(100 %)
0 diff
(100 %id)
CN367816 embryonic stem cells, DMSO-treated H9 cellline .vd 3914 to 4455 8 to 549       542/549
(98 %)
6 diff
(99.0 %id)
CN430590 embryonic stem cells, cell lines H1, H7, andH9 .vn-u 94 to 665 1 to 571 exact tiling clone,   571/571
(100 %)
1 diff
(99.9 %id)
DA427538 colon .e 1390 to 1835 2 to 447   capped   446/446
(100 %)
0 diff
(100 %id)
DA427697 colon .d 22 to 590 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA428267 colon .d 67 to 626 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA428349 colon .d 40 to 602 2 to 569   capped   568/568
(100 %)
6 diff
(99.0 %id)
DA429448 colon .e 1385 to 1850 2 to 467   capped   466/466
(100 %)
3 diff
(99.4 %id)
DA430426 colon .e 1452 to 1973 2 to 523   capped   522/522
(100 %)
0 diff
(100 %id)
DA430839 colon .e 1388 to 1791 2 to 409   capped   408/408
(100 %)
5 diff
(98.8 %id)
DA430867 colon .d 39 to 601 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DA432905 cord Blood .e 1391 to 1903 2 to 514   capped   513/513
(100 %)
0 diff
(100 %id)
CR597107 Placenta Cot 25-normalized .e 2293 to 3015 1 to 722       722/722
(100 %)
1 diff
(99.9 %id)
CR598297 Placenta Cot 25-normalized .e 1433 to 2991 1 to 1559 exact     1559/1559
(100 %)
0 diff
(100 %id)
CR602208 Placenta Cot 25-normalized .f 67 to 1578 1 to 1512 exact     1512/1512
(100 %)
0 diff
(100 %id)
CR604285 Placenta Cot 25-normalized .e 1442 to 2978 1 to 1537 exact     1537/1537
(100 %)
0 diff
(100 %id)
CR608609 placenta .e 1507 to 2951 1 to 1445       1445/1445
(100 %)
0 diff
(100 %id)
CR614567 T cells (Jurkat cell line) Cot10-normalized .h 1350 to 2727 1 to 1378 exact tiling clone,   1378/1378
(100 %)
0 diff
(100 %id)
CR616420 Placenta Cot 25-normalized .e 1426 to 2982 1 to 1557 exact     1557/1557
(100 %)
0 diff
(100 %id)
CR622120 Placenta Cot 25-normalized .k 783 to 1503 1 to 721   tiling clone,   721/721
(100 %)
0 diff
(100 %id)
CR626506 T cells (Jurkat cell line) Cot10-normalized .e 1907 to 2984 1 to 1078       1078/1078
(100 %)
0 diff
(100 %id)
CR747086 brain, medulla .c 1 to 533 1 to 533   tiling clone,   533/533
(100 %)
0 diff
(100 %id)
BX458642 placenta .e 2046 to 2889 920 to 75       848/853
(99 %)
13 diff
(98.5 %id)
AL542301 placenta .e 2001 to 2951 952 to 1       952/952
(100 %)
19 diff
(98.1 %id)
AL542302 placenta .e 1507 to 2482 1 to 956       956/1064
(89 %)
26 diff
(97.6 %id)
BX421805 T cells (Jurkat cell line) .d 37 to 1041 1 to 1004       1004/1004
(100 %)
3 diff
(99.8 %id)
BX436018 T cells (Jurkat cell line) .d 1205 to 1759 557 to 1       557/641
(86 %)
33 diff
(94.9 %id)
AL547441 placenta, Placenta Cot 25-normalized .f 73 to 740 8 to 675   fully sequenced,   668/675
(98 %)
10 diff
(98.6 %id)
AL572484 placenta, Placenta Cot 25-normalized .f 679 to 1567 898 to 11   fully sequenced,   888/898
(98 %)
0 diff
(100 %id)
AL544164 placenta, Placenta Cot 25-normalized .e 2293 to 3015 1 to 722       722/722
(100 %)
1 diff
(99.9 %id)
BX327146 Placenta Cot 25-normalized .g 845 to 1720 8 to 882   tiling clone,   875/886
(98 %)
15 diff
(98.4 %id)
BX396814 Placenta Cot 25-normalized .g 1 to 948 1 to 940   tiling clone,   940/940
(100 %)
14 diff
(98.6 %id)
BX324642 Placenta Cot 25-normalized .e 1439 to 1947 1 to 507       507/764
(66 %)
10 diff
(98.7 %id)
BX387608 Placenta Cot 25-normalized .e 2131 to 2963 851 to 19       833/937
(88 %)
20 diff
(97.9 %id)
BX351872 Placenta Cot 25-normalized .e 2636 to 3005 370 to 1   fully sequenced,   370/370
(100 %)
1 diff
(99.8 %id)
BX359207 Placenta Cot 25-normalized .e 2293 to 3011 1 to 719   fully sequenced,   719/719
(100 %)
0 diff
(100 %id)
AL550743 placenta, Placenta Cot 25-normalized .e 1442 to 1910 1 to 468       468/468
(100 %)
1 diff
(99.8 %id)
AL574518 placenta, Placenta Cot 25-normalized .e 2340 to 2999 664 to 1       664/710
(93 %)
30 diff
(95.8 %id)
BX365153 Placenta Cot 25-normalized .e 2036 to 2978 939 to 1       939/1025
(91 %)
21 diff
(98.0 %id)
BX365154 Placenta Cot 25-normalized .e 1442 to 2428 1 to 979       979/1018
(96 %)
16 diff
(98.5 %id)
AL550772 placenta, Placenta Cot 25-normalized .e 1433 to 2227 1 to 793   fully sequenced,   793/793
(100 %)
1 diff
(99.9 %id)
AL574541 placenta, Placenta Cot 25-normalized .e 2197 to 2988 796 to 4   fully sequenced,   793/796
(99 %)
0 diff
(100 %id)
AL550944 placenta, Placenta Cot 25-normalized .e 1426 to 2190 1 to 764   fully sequenced,   764/764
(100 %)
0 diff
(100 %id)
AL574666 placenta, Placenta Cot 25-normalized .e 2160 to 2982 820 to 1   fully sequenced,   820/820
(100 %)
5 diff
(99.4 %id)
BX399608 Placenta Cot 25-normalized .d 600 to 1651 1 to 1039       1039/1039
(100 %)
31 diff
(97.1 %id)
BX386593   .e 2262 to 2984 728 to 1   fully sequenced,   728/728
(100 %)
8 diff
(99.0 %id)
BX386594   .e 1907 to 2323 1 to 419   fully sequenced,   419/419
(100 %)
5 diff
(98.9 %id)
BX362081   .e 1433 to 2390 15 to 972       958/980
(97 %)
23 diff
(97.7 %id)
BX393110   .e 2756 to 3006 252 to 1       252/252
(100 %)
18 diff
(92.9 %id)
BX400387   .h 1917 to 2715 812 to 13   fully sequenced,   800/812
(98 %)
0 diff
(100 %id)
BX400388   .h 1350 to 1978 1 to 629   fully sequenced,   629/629
(100 %)
0 diff
(100 %id)
DA445641 tongue, tumor tissue .vo-u 1 to 573 2 to 574 exact tiling clone, capped   573/573
(100 %)
1 diff
(99.9 %id)
BX504469   .a 2226 to 2930 1 to 709   tiling clone,   709/709
(100 %)
6 diff
(99.2 %id)
BX952294   .va-u 1 to 666 1 to 667 exact tiling clone,   667/667
(100 %)
3 diff
(99.6 %id)
BX952346   .va-u 1 to 666 1 to 667 exact     667/667
(100 %)
3 diff
(99.6 %id)
DT219250 brain .e 2021 to 2239 1 to 222       222/222
(100 %)
10 diff
(95.5 %id)
DY655234 pooled .e 1529 to 1795 267 to 1       267/267
(100 %)
3 diff
(98.9 %id)
DY655281 pooled .vj 304 to 553 250 to 1       250/250
(100 %)
0 diff
(100 %id)
DY655449 pooled .vj 37 to 410 1 to 375       375/384
(97 %)
10 diff
(97.4 %id)
DY655450 pooled .vj 5 to 610 607 to 2 exact     606/607
(99 %)
5 diff
(99.2 %id)
DY655511 pooled .vj 30 to 580 1 to 551 V16G L24M S25W A31T G36S     551/551
(100 %)
12 diff
(97.9 %id)
DY655512 pooled .vj 143 to 617 475 to 1 exact     475/475
(100 %)
6 diff
(98.8 %id)
DA506018 brain .vd 1987 to 2528 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DA510120 brain .n 1066 to 1308 2 to 244   capped   243/243
(100 %)
1 diff
(99.6 %id)
DA518878 brain .vd 2835 to 3390 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DB317071 brain .vd 4731 to 5132 402 to 1       402/402
(100 %)
1 diff
(99.8 %id)
DA520268 brain .vd 1962 to 2534 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DA537824 Kidney .d 77 to 645 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
CD672787 eye, Iris .e 1438 to 2062 1 to 625       625/625
(100 %)
1 diff
(99.9 %id)
BP390635 pancreatic islet .i 361 to 759 1 to 399     Submitted on the opposite strand 399/572
(69 %)
5 diff
(99.2 %id)
DB456946 testis .e 1391 to 2112 1 to 722       722/722
(100 %)
2 diff
(99.8 %id)
DB522385 testis .e 2302 to 3010 2 to 702     Submitted on the opposite strand 701/704
(99 %)
13 diff
(98.2 %id)
BY799645 eye .vd 3952 to 4478 33 to 559       527/559
(94 %)
6 diff
(99.0 %id)
DA584524 lung .e 1395 to 1962 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
R18995 whole brain .e 1791 to 2131 1 to 348       348/420
(82 %)
12 diff
(97.2 %id)
R44881 whole brain .e 2701 to 3011 318 to 8       311/322
(96 %)
0 diff
(100 %id)
T82952.
matches multiple genes
liver and spleen .vi 1033 to 1305 1 to 272   tiling clone, also hits gene rorserbo 272/333
(81 %)
11 diff
(96.7 %id)
T89447 liver and spleen .e 2690 to 3015 327 to 3       325/370
(87 %)
0 diff
(100 %id)
T89534 liver and spleen .e 1810 to 2235 1 to 438       438/456
(96 %)
22 diff
(95.2 %id)
R27352 placenta .vg 1 to 371 378 to 2 L18C S19R A20P C21A W22G ... tiling clone, Submitted on the opposite strand 377/379
(99 %)
12 diff
(96.9 %id)
R27353 placenta .b 1972 to 2395 1 to 431     Submitted on the opposite strand 431/431
(100 %)
16 diff
(96.3 %id)
R77649 placenta .b 1511 to 1877 370 to 1       370/373
(99 %)
12 diff
(96.8 %id)
H88142 eye, retina .c 1163 to 1419 1 to 258   fully sequenced,   258/258
(100 %)
1 diff
(99.7 %id)
H88143 eye, retina .c 1358 to 1651 292 to 1   fully sequenced,   292/292
(100 %)
5 diff
(98.3 %id)
H61777 ovarian tumor, ovary .e 2604 to 2986 388 to 1       388/393
(98 %)
10 diff
(97.5 %id)
N77935 lung .e 2910 to 3017 113 to 6       108/113
(95 %)
0 diff
(100 %id)
W07103 lung .e 1513 to 1853 1 to 346       346/353
(98 %)
9 diff
(97.5 %id)
N79573 lung .vm-u 367 to 789 428 to 1   tiling clone, fully sequenced,   428/428
(100 %)
21 diff
(95.1 %id)
W16610 lung .vm-u 1 to 397 1 to 396   tiling clone, fully sequenced,   396/396
(100 %)
7 diff
(98.3 %id)
AA234420 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 2206 to 2596 395 to 5     Submitted on the opposite strand 391/395
(98 %)
3 diff
(99.3 %id)
AA236392 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 1926 to 2345 1 to 418     Submitted on the opposite strand 418/418
(100 %)
4 diff
(99.1 %id)
AA292185 ovarian tumor, ovary .e 2645 to 3015 1 to 371   fully sequenced,   371/371
(100 %)
7 diff
(98.2 %id)
AA399360 ovarian tumor, ovary .e 2736 to 3014 279 to 1   fully sequenced,   279/279
(100 %)
0 diff
(100 %id)
AA421660 ovarian tumor, ovary .e 2657 to 3015 1 to 358   fully sequenced,   358/358
(100 %)
2 diff
(99.5 %id)
AA421661 ovarian tumor, ovary .e 2796 to 3016 220 to 1   fully sequenced,   220/220
(100 %)
2 diff
(99.1 %id)
AA477070 ovarian tumor, ovary .e 1754 to 2201 1 to 449       449/449
(100 %)
12 diff
(97.4 %id)
AA476845 ovarian tumor, ovary .e 1468 to 1845 1 to 376       376/376
(100 %)
3 diff
(99.3 %id)
AA478306 ovarian tumor, ovary .e 2725 to 3017 293 to 1   tiling clone,   293/293
(100 %)
0 diff
(100 %id)
AA478365 ovarian tumor, ovary .e 2122 to 2641 1 to 515       515/516
(99 %)
5 diff
(99.1 %id)
AA626184   .b 1959 to 2222 1 to 264     Submitted on the opposite strand 264/265
(99 %)
5 diff
(98.2 %id)
AA428401 ovarian tumor, ovary .e 1447 to 1911 1 to 463       463/468
(98 %)
4 diff
(99.2 %id)
AA434102 ovarian tumor, ovary .e 2620 to 3015 397 to 3       395/397
(99 %)
0 diff
(100 %id)
AA443641 ovarian tumor, ovary .e 1583 to 2096 1 to 507       507/510
(99 %)
15 diff
(97.1 %id)
AA484985 germinal center B cell .e 1647 to 1792 1 to 145       145/145
(100 %)
1 diff
(99.4 %id)
AA683131 germinal center B cell .e 2521 to 3015 501 to 10       492/501
(98 %)
0 diff
(100 %id)
AA524078 colon .e 2544 to 3001 456 to 1       456/464
(98 %)
5 diff
(99.0 %id)
AA552416 colon, tumor .e 2603 to 3010 438 to 32   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 407/407
(100 %)
1 diff
(99.8 %id)
AA579939 breast .e 2714 to 3012 299 to 1       299/299
(100 %)
2 diff
(99.4 %id)
AA887943 colon, colon tumor RER+ .e 1482 to 1677 1 to 196     Submitted on the opposite strand 196/196
(100 %)
1 diff
(99.5 %id)
AA810306 germinal center B cell .e 1394 to 1821 13 to 440     Submitted on the opposite strand 428/428
(100 %)
2 diff
(99.6 %id)
AA720632 germinal center B cell .e 2748 to 2893 146 to 1       146/146
(100 %)
0 diff
(100 %id)
AA741482 germinal center B cell .e 2593 to 3015 452 to 30   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 423/423
(100 %)
0 diff
(100 %id)
AA761804 germinal center B cell .e 2530 to 2854 325 to 1       325/325
(100 %)
3 diff
(99.1 %id)
AA810865 germinal center B cell .e 2662 to 3012 382 to 33   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 350/350
(100 %)
1 diff
(99.8 %id)
AA830416 germinal center B cell .e 2614 to 3010 407 to 12   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 396/396
(100 %)
1 diff
(99.8 %id)
AA863493 pooled germ cell tumors .b 1958 to 2212 1 to 254     Submitted on the opposite strand 254/254
(100 %)
1 diff
(99.7 %id)
AA917480 Kidney .e 2797 to 3014 220 to 3       218/220
(99 %)
0 diff
(100 %id)
AA913105 Kidney .vd 4616 to 4973 358 to 1       358/358
(100 %)
4 diff
(98.9 %id)
AA913541 Kidney .vd 4626 to 4972 348 to 3       346/348
(99 %)
0 diff
(100 %id)
AA935643 pooled .c 1176 to 1607 428 to 1       428/495
(86 %)
12 diff
(97.6 %id)
AA971768 pooled .c 1205 to 1701 496 to 4       493/496
(99 %)
9 diff
(98.2 %id)
AA984147 schizophrenic brain S-11 frontal lobe .b 3853 to 4248 397 to 1   tiling clone,   397/397
(100 %)
1 diff
(99.8 %id)
AA992232   .b 1464 to 1930 455 to 3       453/455
(99 %)
16 diff
(96.5 %id)
AA993632   .e 2043 to 2129 1 to 88     Submitted on the opposite strand 88/88
(100 %)
1 diff
(98.9 %id)
AA984514 schizophrenic brain S-11 frontal lobe .b 2413 to 2732 329 to 10   tiling clone,   319/329
(96 %)
0 diff
(100 %id)
AA999960 Kidney .vh 1 to 387 391 to 1 S38F L39D A40L W41S I42H ... tiling clone,   391/480
(81 %)
5 diff
(99.0 %id)
AI088028 pooled .b 1925 to 2442 1 to 518     Submitted on the opposite strand 518/518
(100 %)
1 diff
(99.9 %id)
AI123553 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 1943 to 2583 1 to 641     Submitted on the opposite strand 641/641
(100 %)
3 diff
(99.6 %id)
AI090141 uterus .vd 4572 to 5131 560 to 1       560/560
(100 %)
4 diff
(99.3 %id)
AI151376 placenta .g 1306 to 1785 480 to 1   tiling clone,   480/547
(87 %)
11 diff
(98.0 %id)
AI184584   .c 1232 to 1687 456 to 1       456/456
(100 %)
0 diff
(100 %id)
AI193260 lung .b 1925 to 2295 1 to 371     Submitted on the opposite strand 371/371
(100 %)
5 diff
(98.7 %id)
AI240020 pooled .b 1958 to 2418 1 to 461     Submitted on the opposite strand 461/461
(100 %)
7 diff
(98.5 %id)
AI268757 carcinoid, lung .e 2611 to 3011 402 to 2       401/402
(99 %)
0 diff
(100 %id)
AI342265 uterus .e 2611 to 3013 421 to 19       403/421
(95 %)
0 diff
(100 %id)
AI273208 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .e 2587 to 3015 434 to 5       430/434
(99 %)
0 diff
(100 %id)
AI337657 brain, tumor, 5 pooled (see description) .vd 3157 to 3215 59 to 1       59/59
(100 %)
0 diff
(100 %id)
AI359538 pooled germ cell tumors .e 2579 to 3016 438 to 1       438/438
(100 %)
0 diff
(100 %id)
AI343429 colon, colon tumor, RER+ .e 2596 to 3000 405 to 1       405/405
(100 %)
0 diff
(100 %id)
AI804149 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .e 2767 to 3016 250 to 1       250/250
(100 %)
0 diff
(100 %id)
AI862434 colon, colon tumor, RER+ .e 2600 to 3011 412 to 1       412/412
(100 %)
1 diff
(99.8 %id)
AI825886 colon, colon tumor, RER+ .e 2293 to 3011 720 to 2       719/732
(98 %)
0 diff
(100 %id)
AI394654 B-cell, chronic lymphotic leukemia .e 1475 to 1854 139 to 519     Submitted on the opposite strand 379/508
(74 %)
22 diff
(95.7 %id)
AI391526 B-cell, chronic lymphotic leukemia .e 2562 to 3010 449 to 1       449/449
(100 %)
1 diff
(99.8 %id)
AI380003 B-cell, chronic lymphotic leukemia .e 2658 to 3010 370 to 18   AAA   353/359
(98 %)
0 diff
(100 %id)
AI468627 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .e 2614 to 3015 403 to 1       403/403
(100 %)
2 diff
(99.6 %id)
AI536645 Kidney .c 1321 to 1705 385 to 1       385/385
(100 %)
0 diff
(100 %id)
AI458861 pooled .a 2200 to 2747 558 to 11   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 548/548
(100 %)
0 diff
(100 %id)
AI473964 colon, moderately-differentiated adenocarcinoma .e 2594 to 3013 421 to 2       420/421
(99 %)
0 diff
(100 %id)
AI469719 colon, moderately-differentiated adenocarcinoma .e 2647 to 3016 367 to 1       367/367
(100 %)
5 diff
(98.7 %id)
AI537341 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .e 2803 to 3015 227 to 15   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 213/213
(100 %)
0 diff
(100 %id)
AI745722 ovary, tumor, 5 pooled (see description) .e 2708 to 3016 308 to 1       308/308
(100 %)
6 diff
(98.1 %id)
AI572038 adenocarcinoma, Pancreas .e 2824 to 3013 226 to 37       190/226
(84 %)
0 diff
(100 %id)
AI632193 pooled germ cell tumors .e 2663 to 3011 353 to 5       349/353
(98 %)
0 diff
(100 %id)
AI699985 pooled germ cell tumors .e 2613 to 3016 404 to 1       404/404
(100 %)
0 diff
(100 %id)
AI698440 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 1612 to 1933 322 to 1       322/322
(100 %)
3 diff
(99.1 %id)
AI650778 Kidney .c 1263 to 1705 442 to 1       442/442
(100 %)
5 diff
(98.9 %id)
AI699259 adenocarcinoma, Pancreas .e 2800 to 3015 218 to 2       217/218
(99 %)
0 diff
(100 %id)
AI674930 adenocarcinoma, Pancreas .e 2528 to 3001 480 to 7       474/480
(98 %)
0 diff
(100 %id)
AI693087 pooled .c 1223 to 1702 480 to 1       480/480
(100 %)
5 diff
(99.0 %id)
AI720677 colon .e 2773 to 3010 239 to 2       238/239
(99 %)
0 diff
(100 %id)
AI673229 colon, colonic mucosa from 3 patients with Crohn'sdisease .e 2707 to 3015 318 to 10       309/318
(97 %)
0 diff
(100 %id)
AI672814 colon, colonic mucosa from 3 patients with Crohn'sdisease .e 2611 to 3003 401 to 9       393/401
(98 %)
0 diff
(100 %id)
AI873016 pooled .b 1670 to 1894 226 to 1       226/299
(75 %)
2 diff
(99.4 %id)
AI809969 pooled .b 1935 to 2469 1 to 535     Submitted on the opposite strand 535/535
(100 %)
0 diff
(100 %id)
AI760579 B-cell, chronic lymphotic leukemia .e 2527 to 3011 487 to 4       484/487
(99 %)
0 diff
(100 %id)
AI760698 B-cell, chronic lymphotic leukemia .e 2611 to 3010 414 to 14   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 401/401
(100 %)
6 diff
(98.6 %id)
AI916145 colon, colon tumor, RER+ .e 2734 to 3010 288 to 12   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 277/277
(100 %)
2 diff
(99.3 %id)
AI829906 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .e 2296 to 3017 724 to 4       721/781
(92 %)
0 diff
(100 %id)
AI870507 anaplastic oligodendroglioma, brain .e 2840 to 2999 171 to 12       160/171
(93 %)
0 diff
(100 %id)
AI871124 anaplastic oligodendroglioma, brain .vd 4583 to 5135 555 to 5       551/555
(99 %)
0 diff
(100 %id)
AI884452 serous papillary carcinoma, high grade, 2pooled tumors, uterus .e 2562 to 3016 455 to 1       455/455
(100 %)
1 diff
(99.8 %id)
AI932581.
matches multiple genes
adenocarcinoma, Pancreas .e 2825 to 3017 196 to 3   tiling clone, also hits gene LGALS9C 194/196
(98 %)
0 diff
(100 %id)
AI925520 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .vd 4620 to 5132 514 to 1       514/514
(100 %)
1 diff
(99.9 %id)
AI949376 2 pooled tumors (clear cell type), Kidney .vd 4634 to 5132 502 to 4       499/502
(99 %)
0 diff
(100 %id)
AI950263 pooled germ cell tumors .e 2598 to 3003 406 to 1       406/406
(100 %)
0 diff
(100 %id)
AW004040 pooled germ cell tumors .vd 4553 to 5033 482 to 2       481/482
(99 %)
0 diff
(100 %id)
AW004734 colon .e 2752 to 3013 266 to 5       262/271
(96 %)
0 diff
(100 %id)
AI961398 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .e 2695 to 3011 322 to 5       318/322
(98 %)
0 diff
(100 %id)
AI982820 adenocarcinoma, Pancreas .vd 4684 to 5030 360 to 12   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 349/349
(100 %)
9 diff
(97.5 %id)
AI986057 colon, colonic mucosa from 3 patients with Crohn'sdisease .e 2772 to 3015 245 to 2       244/245
(99 %)
0 diff
(100 %id)
AW025206 Kidney .g 1342 to 1785 445 to 1   tiling clone,   445/567
(78 %)
3 diff
(99.5 %id)
AW027596 thymus, pooled .vd 4581 to 5132 552 to 1       552/552
(100 %)
1 diff
(99.9 %id)
AW050823 colon, colonic mucosa from 3 patients with Crohn'sdisease .e 2623 to 3011 393 to 3       391/396
(98 %)
0 diff
(100 %id)
AW241147 connective tissue, five pooled sarcomas, including myxoidliposarcoma, solitary fibrous tumor, malignant fibroushistiocytoma, gastrointestinal stromal tumor, andmesothelioma .e 2850 to 3011 170 to 9       162/170
(95 %)
0 diff
(100 %id)
AW129390 serous papillary carcinoma, high grade, 2pooled tumors, uterus .e 2637 to 3010 384 to 11   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 374/376
(99 %)
2 diff
(99.5 %id)
AW132150 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .e 2679 to 3012 349 to 17   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 333/333
(100 %)
14 diff
(95.8 %id)
AW150241 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .vd 4572 to 5031 461 to 1       461/461
(100 %)
3 diff
(99.4 %id)
AW166909 serous papillary carcinoma, high grade, 2pooled tumors, uterus .e 2594 to 3015 422 to 1       422/422
(100 %)
4 diff
(99.1 %id)
AW183864 pooled .e 2458 to 3011 552 to 1       552/586
(94 %)
17 diff
(97.1 %id)
AW166454 cervix .b 1958 to 2499 1 to 542     Submitted on the opposite strand 542/542
(100 %)
5 diff
(99.1 %id)
AW197711 pooled .e 2580 to 3015 439 to 1       439/439
(100 %)
10 diff
(97.8 %id)
AW297601   .s 1 to 428 428 to 1 W10* tiling clone,   428/428
(100 %)
1 diff
(99.8 %id)
AW182775 cervix, tumor .b 1957 to 2412 1 to 455     Submitted on the opposite strand 455/455
(100 %)
3 diff
(99.4 %id)
AW439226 serous papillary carcinoma, high grade, 2pooled tumors, uterus .e 2594 to 3013 419 to 1       419/419
(100 %)
2 diff
(99.6 %id)
AW512046 lymph node, lymphoma, follicular mixed small and largecell .e 2771 to 3010 251 to 12   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 240/240
(100 %)
2 diff
(99.2 %id)
AW474949 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .e 2840 to 3016 195 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 177/177
(100 %)
5 diff
(97.2 %id)
AW511156 pooled .a 2495 to 2748 261 to 8       254/261
(97 %)
0 diff
(100 %id)
AW593378 pooled germ cell tumors .vd 4585 to 5028 446 to 3       444/446
(99 %)
0 diff
(100 %id)
AW661861 pooled .b 1925 to 2387 1 to 461     Submitted on the opposite strand 461/461
(100 %)
6 diff
(98.7 %id)
BE304479 adenocarcinoma cell line, colon .e 1434 to 1670 1 to 237       237/237
(100 %)
1 diff
(99.6 %id)
BE044996 follicular adenoma (benign lesion), thyroid .e 1009 to 1222 34 to 247     Submitted on the opposite strand 214/254
(84 %)
6 diff
(97.7 %id)
AW402671 lymph .e 1444 to 1844 7 to 407       401/407
(98 %)
9 diff
(97.8 %id)
AW403229 lymph .d 332 to 770 1 to 439       439/439
(100 %)
5 diff
(98.9 %id)
BF512794   .q 1 to 479 1 to 479 exact tiling clone, Submitted on the opposite strand 479/483
(99 %)
1 diff
(99.8 %id)
BF507726   .vm-u 580 to 813 234 to 1   tiling clone,   234/234
(100 %)
2 diff
(99.2 %id)
BF514445   .vd 3537 to 3887 369 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 351/353
(99 %)
12 diff
(96.7 %id)
BF510390   .c 1308 to 1704 397 to 1       397/397
(100 %)
1 diff
(99.8 %id)
AW874354 tumor, uterus .e 2614 to 3017 408 to 5       404/408
(99 %)
0 diff
(100 %id)
BE349431 malignant melanoma, metastatic to lymphnode, skin .e 2507 to 3015 509 to 1       509/509
(100 %)
0 diff
(100 %id)
BE502589 pooled germ cell tumors .e 2570 to 3013 445 to 1       445/448
(99 %)
0 diff
(100 %id)
BE504897 pooled germ cell tumors .e 2597 to 3013 417 to 1       417/417
(100 %)
0 diff
(100 %id)
CB047126.
matches multiple genes
2 pooled tumors (clear cell type), Kidney .e 2512 to 2736 24 to 248     also hits gene LGALS9B 225/248
(90 %)
6 diff
(97.6 %id)
BF593760 brain, glioblastoma (pooled) .e 2654 to 3015 364 to 3       362/364
(99 %)
0 diff
(100 %id)
BE677501 dorsal root ganglia .e 2622 to 3010 401 to 13   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 389/389
(100 %)
1 diff
(99.8 %id)
BE674692 B-cell, chronic lymphotic leukemia .e 2559 to 3011 453 to 1       453/453
(100 %)
5 diff
(98.9 %id)
BE675804 B-cell, chronic lymphotic leukemia .e 2647 to 3017 374 to 4       371/374
(99 %)
0 diff
(100 %id)
BF001287 colon, colon tumor, RER+ .e 2539 to 3000 462 to 1       462/462
(100 %)
3 diff
(99.4 %id)
BF000302 colon, colon tumor, RER+ .e 2536 to 3010 476 to 1       476/481
(98 %)
2 diff
(99.6 %id)
BF062741 colon, colon tumor, RER+ .e 2772 to 3013 243 to 1       243/243
(100 %)
3 diff
(98.8 %id)
BF063113 colon, colon tumor, RER+ .e 2570 to 3017 448 to 1       448/448
(100 %)
1 diff
(99.8 %id)
BF055493 pooled .e 2828 to 3003 176 to 1       176/176
(100 %)
1 diff
(99.5 %id)
BF197212 brain, glioblastoma (pooled) .e 2669 to 3016 348 to 1       348/348
(100 %)
1 diff
(99.8 %id)
BF434022 fibrotheoma, ovary .b 1926 to 2471 1 to 547     Submitted on the opposite strand 547/556
(98 %)
19 diff
(96.6 %id)
BF347161 anaplastic oligodendroglioma with 1p/19qloss, brain .e 1413 to 2126 1 to 719       719/763
(94 %)
28 diff
(96.4 %id)
BF528425 anaplastic oligodendroglioma with 1p/19qloss, brain .vd 2796 to 3616 1 to 828       828/1114
(74 %)
52 diff
(95.4 %id)
BF341228 brain, glioblastoma with EGFR amplification .e 2290 to 3001 1 to 705   AAA   705/712
(99 %)
23 diff
(96.8 %id)
BG150965 normal head/neck tissue .e 2740 to 3015 59 to 334       276/339
(81 %)
2 diff
(99.5 %id)
BF975655 B-cells, primary B-cells from tonsils (cell line) .e 1580 to 1691 1 to 112       112/112
(100 %)
1 diff
(99.2 %id)
BG390210 embryonal carcinoma, cell line, testis .i 28 to 589 1 to 562   tiling clone,   562/562
(100 %)
1 diff
(99.9 %id)
BG469339 adenocarcinoma cell line, colon .e 1421 to 1691 1 to 271       271/271
(100 %)
1 diff
(99.7 %id)
BG698264 skin .l 1 to 783 1 to 780 A155D H163N A165L Y166S P167D ... tiling clone,   782/784
(99 %)
21 diff
(97.4 %id)
BG745218 Spleen .i 21 to 281 1 to 261       261/261
(100 %)
2 diff
(99.3 %id)
BG746086 Spleen .i 795 to 1352 567 to 3   tiling clone,   565/753
(75 %)
0 diff
(100 %id)
BG759013 B-cells, primary B-cells from tonsils (cell line) .e 1511 to 1691 1 to 181       181/181
(100 %)
1 diff
(99.5 %id)
BG756402 B-cells, primary B-cells from tonsils (cell line) .i 350 to 1104 1 to 754   tiling clone,   754/754
(100 %)
2 diff
(99.8 %id)
BG760034 B-cells, primary B-cells from tonsils (cell line) .i 1 to 796 1 to 814 G23R F45L A46L V47* tiling clone,   814/817
(99 %)
44 diff
(94.7 %id)
BI086433 cervix .vd 4196 to 5007 1 to 813       813/855
(95 %)
20 diff
(97.7 %id)
BI091489 cervix .vd 3739 to 4337 1 to 604       604/834
(72 %)
12 diff
(98.6 %id)
BC035488 Brain, adult medulla .n 9 to 3003 1 to 2999 exact tiling clone, available from MGC,   2999/2999
(100 %)
5 diff
(99.9 %id)
BI829010 brain, medulla .n 9 to 379 1 to 371   available from MGC,   371/555
(66 %)
7 diff
(98.8 %id)
BC042106 Brain, adult medulla .b 11 to 1924 1 to 1918   tiling clone, available from MGC,   1918/1918
(100 %)
5 diff
(99.8 %id)
BI826185 brain, medulla .b 11 to 713 1 to 700   available from MGC,   700/700
(100 %)
3 diff
(99.6 %id)
BI829205 brain, medulla .c 1 to 698 1 to 697   tiling clone,   697/697
(100 %)
10 diff
(98.6 %id)
BI818252 pooled brain, lung, testis .e 1439 to 2131 1 to 694       694/698
(99 %)
7 diff
(99.0 %id)
BI819041 pooled brain, lung, testis .e 1439 to 2267 1 to 827       827/828
(99 %)
6 diff
(99.3 %id)
BI824528 pooled brain, lung, testis .e 1401 to 2013 1 to 614       614/621
(98 %)
6 diff
(99.1 %id)
BI822660 pooled brain, lung, testis .e 1432 to 2197 1 to 766       766/766
(100 %)
0 diff
(100 %id)
BI820059 pooled brain, lung, testis .e 1434 to 2256 1 to 820       820/822
(99 %)
16 diff
(98.1 %id)
BI822165 pooled brain, lung, testis .e 1436 to 2256 1 to 821       821/822
(99 %)
14 diff
(98.3 %id)
BI758821 pooled colon, kidney, stomach .d 85 to 745 1 to 666       666/730
(91 %)
22 diff
(97.0 %id)
BI763348 pooled colon, kidney, stomach .e 1413 to 2062 1 to 650       650/650
(100 %)
3 diff
(99.6 %id)
BI763004 pooled colon, kidney, stomach .d 85 to 787 1 to 702       702/721
(97 %)
8 diff
(98.9 %id)
BC034392 Brain, adult, 6 pooled whole brains .r 375 to 2722 1 to 2348 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 2348/2348
(100 %)
2 diff
(100.0 %id)
BI752836 brain .r 375 to 1082 1 to 709   available from MGC,   709/709
(100 %)
4 diff
(99.5 %id)
BC037586 Brain, adult, 6 pooled whole brains .vd 71 to 2388 1 to 2318 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 2318/2318
(100 %)
0 diff
(100 %id)
BI756651 brain .vd 71 to 727 1 to 657 exact available from MGC,   657/658
(99 %)
2 diff
(99.7 %id)
BI768462 pooled lung and spleen .e 1423 to 2268 1 to 862       862/863
(99 %)
38 diff
(95.6 %id)
BI766721 pooled lung and spleen .d 67 to 923 1 to 852       772/852
(90 %)
26 diff
(97.0 %id)
BI771893 pooled lung and spleen .e 1456 to 2255 1 to 799       801/800
(100 %)
17 diff
(97.9 %id)
BI767188 pooled lung and spleen .e 1438 to 2181 1 to 744       744/744
(100 %)
1 diff
(99.9 %id)
BI767625 pooled lung and spleen .d 54 to 711 1 to 658       658/660
(99 %)
5 diff
(99.3 %id)
BI906455 leukocyte .e 1415 to 2181 1 to 768       766/768
(99 %)
2 diff
(99.8 %id)
BI908973 leukocyte .e 1461 to 2256 1 to 796       796/798
(99 %)
8 diff
(99.0 %id)
BI909323 leukocyte .e 2290 to 2911 1 to 626       626/627
(99 %)
16 diff
(97.5 %id)
BI910870 leukocyte .d 67 to 787 1 to 723       723/905
(79 %)
3 diff
(99.7 %id)
BI910624 leukocyte .e 1432 to 2214 1 to 798       771/799
(96 %)
42 diff
(94.8 %id)
BI909948 leukocyte .e 1428 to 2298 1 to 871       871/894
(97 %)
12 diff
(98.7 %id)
BI912397 leukocyte .d 73 to 732 1 to 660       660/660
(100 %)
5 diff
(99.3 %id)
BI838306 pooled pancreas and spleen .e 1407 to 2214 1 to 807       807/808
(99 %)
9 diff
(98.9 %id)
BI837850 pooled pancreas and spleen .e 1432 to 2192 1 to 755       757/757
(100 %)
21 diff
(97.3 %id)
BI838002 pooled pancreas and spleen .e 1427 to 2221 1 to 789       789/796
(99 %)
11 diff
(98.7 %id)
BI836029 pooled pancreas and spleen .d 83 to 750 1 to 667       667/667
(100 %)
1 diff
(99.9 %id)
BI833207 pooled pancreas and spleen .e 1438 to 2181 1 to 743       743/744
(99 %)
2 diff
(99.8 %id)
BI833425 pooled pancreas and spleen .e 1434 to 2040 1 to 604       604/606
(99 %)
5 diff
(99.2 %id)
BI835518 pooled pancreas and spleen .e 1434 to 2081 1 to 648       648/648
(100 %)
1 diff
(99.9 %id)
BI523497 brain .e 1446 to 2021 9 to 589       581/589
(98 %)
7 diff
(98.9 %id)
BM543093 embryonal carcinoma, cell line, testis .e 1439 to 2206 1 to 774       774/1043
(74 %)
12 diff
(98.9 %id)
BM454676 embryonal carcinoma, cell line, testis .e 1429 to 1911 1 to 483       483/1290
(37 %)
10 diff
(99.3 %id)
BM545099 ovary (pool of 3) .f 87 to 1189 24 to 1125 N180K R182P D184*     1102/1129
(97 %)
36 diff
(96.9 %id)
BM545115 ovary (pool of 3) .e 1430 to 2397 21 to 1000       980/1209
(81 %)
42 diff
(96.6 %id)
BM906202 ovary (pool of 3) .j 1 to 732 15 to 755 G5S M181D P182A I184H T185H ... tiling clone,   741/1101
(67 %)
16 diff
(98.6 %id)
BM553262 brain, medulla .e 1812 to 2721 15 to 930       916/1188
(77 %)
25 diff
(97.9 %id)
BM908066 brain, medulla .vl 1 to 892 2 to 906 S45Q W46L S47E S48F L49I ... tiling clone,   905/1110
(81 %)
27 diff
(97.6 %id)
BM918903 pooled pancreas and spleen .e 1428 to 2413 16 to 1019       1004/1099
(91 %)
26 diff
(97.7 %id)
BM919899 pooled pancreas and spleen .e 2417 to 3010 1 to 594       594/595
(99 %)
2 diff
(99.7 %id)
BM920305 pooled pancreas and spleen .d 56 to 1035 1 to 979       979/1030
(95 %)
24 diff
(97.7 %id)
BM920586 pooled lung and spleen .d 116 to 1045 19 to 952       934/1095
(85 %)
21 diff
(98.1 %id)
BM922690 leukocyte .e 1435 to 2298 1 to 867       867/1023
(84 %)
18 diff
(98.3 %id)
BQ072770 leukocyte .d 90 to 939 20 to 873       852/1076
(79 %)
17 diff
(98.5 %id)
BM924614 pooled colon, kidney, stomach .e 1408 to 2341 27 to 970       942/1048
(89 %)
30 diff
(97.2 %id)
CB857191 anterior tongue, pooled .r 1275 to 1601 1 to 327   tiling clone,   327/421
(77 %)
2 diff
(99.6 %id)
BQ006468 Chondrosarcoma, Left Pelvis .e 2746 to 3001 274 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 256/256
(100 %)
0 diff
(100 %id)
BQ003630 Chondrosarcoma, Left Pelvis .e 2411 to 3015 623 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 605/605
(100 %)
1 diff
(99.9 %id)
BQ005137 Chondrosarcoma, Left Pelvis .e 2538 to 3010 491 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 473/473
(100 %)
0 diff
(100 %id)
BM989782 lung, Metastatic Chondrosarcoma .a 2104 to 2743 656 to 17   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 640/640
(100 %)
0 diff
(100 %id)
BM990008 lung, Lung Focal Fibrosis .e 2170 to 2897 44 to 768     Submitted on the opposite strand 725/750
(96 %)
10 diff
(98.7 %id)
BM992495 lung, Metastatic Chondrosarcoma .e 2381 to 3016 652 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 634/634
(100 %)
2 diff
(99.7 %id)
BQ029152 lung, Metastatic Chondrosarcoma .e 2600 to 3016 435 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 417/417
(100 %)
0 diff
(100 %id)
BQ029836 lung, Metastatic Chondrosarcoma .e 2688 to 3012 341 to 17   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 325/325
(100 %)
2 diff
(99.4 %id)
BQ030307 lung, Metastatic Chondrosarcoma .e 2843 to 3010 186 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 168/168
(100 %)
0 diff
(100 %id)
BM996290 lung, Metastatic Chondrosarcoma .e 2411 to 3010 613 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 595/595
(100 %)
5 diff
(99.2 %id)
BM996310 lung, Metastatic Chondrosarcoma .e 2491 to 3010 538 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 520/520
(100 %)
0 diff
(100 %id)
BU185607 ductal carcinoma, cell line, Pancreas .d 97 to 878 1 to 784       784/887
(88 %)
11 diff
(98.8 %id)
BU948250 insulinoma, Pancreas .vb 1 to 448 468 to 21 G5S tiling clone, AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 448/449
(99 %)
3 diff
(99.4 %id)
BU948518 insulinoma, Pancreas .vb 1 to 425 3 to 427 G5S tiling clone,   425/427
(99 %)
6 diff
(98.6 %id)
CK826422 insulinoma, Pancreas .vb 1 to 447 447 to 1 G5S     447/448
(99 %)
3 diff
(99.4 %id)
BQ722163 sympathetic trunk .vd 3868 to 4712 1 to 845       845/917
(92 %)
24 diff
(97.4 %id)
BQ688386 ductal carcinoma, cell line, Pancreas .e 1450 to 2289 1 to 841       841/866
(97 %)
8 diff
(99.1 %id)
BQ706384 Spleen .e 1490 to 2137 1 to 649       649/1013
(64 %)
11 diff
(99.0 %id)
BQ708668 Spleen .e 1852 to 2417 78 to 653       576/1185
(48 %)
29 diff
(97.6 %id)
CA941857 Pancreas, Purified pancreatic islet .c 1204 to 1670 468 to 1       468/577
(81 %)
7 diff
(98.8 %id)
CA942123 Pancreas, Purified pancreatic islet .vq-u 1 to 543 1 to 543 exact tiling clone,   543/543
(100 %)
0 diff
(100 %id)
CK902991 Pancreas, Purified pancreatic islet .vq-u 16 to 426 1 to 411     Submitted on the opposite strand 411/411
(100 %)
0 diff
(100 %id)
CB068636 Pancreas, Purified pancreatic islet .e 2510 to 3014 507 to 1       507/507
(100 %)
1 diff
(99.9 %id)
CB069899 Pancreas, Purified pancreatic islet .e 1428 to 2046 1 to 619       619/619
(100 %)
2 diff
(99.7 %id)
BU538175 adenocarcinoma, cell line, breast .e 1426 to 2288 20 to 889       870/983
(88 %)
24 diff
(97.6 %id)
CV804986 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .c 907 to 1657 1 to 751       751/751
(100 %)
0 diff
(100 %id)
CB594613 Blood, promyelocytic leukemia .d 54 to 914 1 to 857       857/895
(95 %)
7 diff
(99.3 %id)
CB594367 Blood, promyelocytic leukemia .k 33 to 786 1 to 755       755/863
(87 %)
6 diff
(99.4 %id)
CD243618 testis .vk-u 646 to 1485 864 to 7   tiling clone, Submitted on the opposite strand 858/865
(99 %)
0 diff
(100 %id)
CD516723 White Matter .e 1446 to 1801 1 to 359       359/876
(40 %)
5 diff
(99.5 %id)
TI_57214976   .r 375 to 1082 32 to 740       709/740
(95 %)
6 diff
(99.2 %id)
TI_57216451   .vd 71 to 727 31 to 687 exact     657/688
(95 %)
7 diff
(99.0 %id)
TI_57196053   .e 1439 to 2131 27 to 720       694/724
(95 %)
11 diff
(98.5 %id)
TI_57196517   .e 1439 to 2267 36 to 862       827/863
(95 %)
12 diff
(98.7 %id)
TI_57198040   .e 1400 to 2013 29 to 643       615/650
(94 %)
12 diff
(98.2 %id)
TI_57198758   .e 1428 to 2197 26 to 795       770/795
(96 %)
6 diff
(99.3 %id)
TI_57199769   .e 1429 to 2256 31 to 855       825/857
(96 %)
22 diff
(97.5 %id)
TI_57201781   .e 1436 to 2256 70 to 890       821/891
(92 %)
20 diff
(97.8 %id)
TI_57146115   .d 80 to 745 64 to 734       671/798
(84 %)
28 diff
(96.5 %id)
TI_57150014   .e 1406 to 2062 57 to 713       657/713
(92 %)
7 diff
(99.1 %id)
TI_57150608   .d 80 to 787 63 to 769       707/788
(89 %)
12 diff
(98.5 %id)
TI_57178628   .e 1423 to 2268 34 to 895       793/896
(88 %)
29 diff
(96.8 %id)
TI_57180776   .d 67 to 923 29 to 880       772/880
(87 %)
30 diff
(96.6 %id)
TI_57182408   .e 1456 to 2255 21 to 819       801/820
(97 %)
23 diff
(97.2 %id)
TI_57183638   .e 1438 to 2181 73 to 816       744/816
(91 %)
7 diff
(99.2 %id)
TI_57183854   .d 55 to 711 36 to 692       657/694
(94 %)
10 diff
(98.6 %id)
TI_57232395   .e 1407 to 2181 23 to 798       774/798
(96 %)
7 diff
(99.2 %id)
TI_57235227   .e 1456 to 2256 32 to 832       801/834
(96 %)
13 diff
(98.5 %id)
TI_57235387   .e 2293 to 2911 38 to 660       623/661
(94 %)
14 diff
(97.9 %id)
TI_57235642   .d 67 to 787 31 to 753       723/935
(77 %)
9 diff
(99.1 %id)
TI_57237173   .e 1428 to 2214 28 to 829       778/830
(93 %)
46 diff
(94.5 %id)
TI_57237714   .e 1427 to 2298 39 to 910       872/933
(93 %)
18 diff
(98.1 %id)
TI_57172571   .n 1 to 379 22 to 399   tiling clone, AAA   378/571
(66 %)
9 diff
(98.5 %id)
TI_57173664   .b 1 to 713 21 to 730   tiling clone,   710/730
(97 %)
9 diff
(98.8 %id)
TI_57176122   .c 1 to 698 66 to 762       697/762
(91 %)
15 diff
(98.1 %id)
TI_57162945   .e 1401 to 2214 32 to 844       813/845
(96 %)
15 diff
(98.3 %id)
TI_57163203   .e 1428 to 2192 26 to 784       761/786
(96 %)
31 diff
(96.1 %id)
TI_57163447   .e 1427 to 2221 35 to 823       789/830
(95 %)
17 diff
(98.0 %id)
TI_57163584   .d 79 to 750 31 to 701       671/701
(95 %)
7 diff
(99.1 %id)
TI_57165898   .e 1438 to 2181 30 to 772       743/773
(96 %)
8 diff
(99.0 %id)
TI_57166503   .e 1429 to 2040 28 to 636       609/638
(95 %)
11 diff
(98.3 %id)
TI_57167253   .e 1429 to 2081 29 to 681       653/681
(95 %)
7 diff
(99.0 %id)
TI_44184836   .e 1446 to 2021 9 to 589       581/589
(98 %)
7 diff
(98.9 %id)
TI_57247327   .d 74 to 732 30 to 689       660/689
(95 %)
7 diff
(99.0 %id)
AU076904   .e 1384 to 1507 1 to 124       124/134
(92 %)
4 diff
(97.1 %id)
AU100495   .e 1383 to 1659 24 to 300       277/300
(92 %)
6 diff
(98.0 %id)
BP383193 ilea mucosa .d 81 to 657 1 to 575       575/674
(85 %)
5 diff
(99.3 %id)
AU309870 neuroblastoma .e 1390 to 1907 8 to 525       518/518
(100 %)
0 diff
(100 %id)
NM_002308.3   .e 1350 to 3016 1 to 1667 exact RefSeq, AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 1667/1667
(100 %)
0 diff
(100 %id)
NM_009587.2   .d 1 to 1763 1 to 1763 exact RefSeq, AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 1763/1763
(100 %)
0 diff
(100 %id)
NM_014238.1   .b 11 to 4495 1 to 4490 exact RefSeq, AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 4490/4490
(100 %)
3 diff
(100.0 %id)
DA681034 ovary .e 1412 to 1958 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA681693 ovary .e 1395 to 1870 2 to 477   capped   476/476
(100 %)
0 diff
(100 %id)
NR_024043.1   .f 1 to 1596 1 to 1596 exact RefSeq, tiling clone, AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 1596/1596
(100 %)
0 diff
(100 %id)
DA773654 brain .vd 2490 to 3060 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA787850 brain .vd 2358 to 2876 2 to 524   capped   523/523
(100 %)
4 diff
(99.3 %id)
DA794910 brain .vd 1982 to 2530 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
DA835195 placenta .d 42 to 582 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DA841541 placenta .e 1412 to 1963 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA841976 placenta .e 1387 to 1933 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
DA856359 placenta .p 1 to 591 2 to 592 F45L capped   591/591
(100 %)
2 diff
(99.7 %id)
DA856563 placenta .p 18 to 576 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA890155 rectum .d 64 to 630 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA890528 rectum .d 74 to 596 11 to 533   capped   523/523
(100 %)
0 diff
(100 %id)
CR975403 T-Lymphocytes .d 109 to 934 1 to 833       833/844
(98 %)
10 diff
(98.9 %id)
CT002953 T-Lymphocytes .d 67 to 851 1 to 790       790/793
(99 %)
13 diff
(98.4 %id)
CR981646 T-Lymphocytes .d 471 to 1168 1 to 697       697/697
(100 %)
2 diff
(99.8 %id)
CR979462 T-Lymphocytes .d 58 to 866 1 to 812       812/813
(99 %)
9 diff
(98.9 %id)
CR982887 T-Lymphocytes .e 1399 to 2276 1 to 881       881/881
(100 %)
6 diff
(99.4 %id)
CR981367 T-Lymphocytes .e 2129 to 2469 1 to 342       342/342
(100 %)
5 diff
(98.6 %id)
CR978530 T-Lymphocytes .e 1440 to 2276 1 to 840       840/841
(99 %)
6 diff
(99.3 %id)
BM764878 Ascites, stomach .e 1965 to 2501 1 to 537       537/537
(100 %)
0 diff
(100 %id)
BM773418 stomach .e 2203 to 2807 1 to 605       605/605
(100 %)
2 diff
(99.7 %id)
BM769612 stomach .d 74 to 653 1 to 580       580/580
(100 %)
2 diff
(99.7 %id)
BM797433 stomach .e 2527 to 3002 1 to 477       477/477
(100 %)
2 diff
(99.6 %id)
BM818391 stomach .d 63 to 625 1 to 563       563/563
(100 %)
0 diff
(100 %id)
BM818692 stomach .d 77 to 596 1 to 520       520/520
(100 %)
1 diff
(99.9 %id)
BM818695 stomach .d 63 to 582 1 to 520       520/520
(100 %)
2 diff
(99.7 %id)
DA918704 small intestine .vd 2843 to 3402 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA934978 Spleen .vi 748 to 1311 2 to 565   tiling clone, capped   564/564
(100 %)
4 diff
(99.3 %id)
DA936243 Spleen .m 488 to 1048 2 to 562   tiling clone, capped   561/561
(100 %)
1 diff
(99.9 %id)
DA937303 Spleen .r 486 to 1066 2 to 585   capped   584/584
(100 %)
4 diff
(99.4 %id)
DA938100 Spleen .e 1414 to 2009 2 to 597   capped   596/596
(100 %)
0 diff
(100 %id)
DA940775 Spleen .d 63 to 648 2 to 587   capped   586/586
(100 %)
4 diff
(99.4 %id)
DA944305 Spleen .vp -9 to 546 2 to 557 G5S tiling clone, capped   556/556
(100 %)
1 diff
(99.9 %id)
DA944520 Spleen .d 41 to 585 2 to 547   capped   546/546
(100 %)
3 diff
(99.5 %id)
DA949637 Spleen .i 2 to 573 2 to 576   capped   575/575
(100 %)
4 diff
(99.4 %id)
DA970789 synovial membrane tissue from rheumatioidarthritis .e 1413 to 1903 2 to 492   capped   491/491
(100 %)
3 diff
(99.4 %id)
DA971644 synovial membrane tissue from rheumatioidarthritis .e 1398 to 1921 2 to 525   capped   524/524
(100 %)
0 diff
(100 %id)
DA971767 synovial membrane tissue from rheumatioidarthritis .e 1414 to 1889 2 to 477   capped   476/476
(100 %)
0 diff
(100 %id)
DA972931 synovial membrane tissue from rheumatioidarthritis .e 1386 to 1950 2 to 566   capped   565/565
(100 %)
2 diff
(99.7 %id)
DA976411 synovial membrane tissue from rheumatioidarthritis .d 40 to 578 9 to 547   capped   539/539
(100 %)
2 diff
(99.7 %id)
DA978425 synovial membrane tissue from rheumatioidarthritis .e 1375 to 1835 2 to 462   capped   461/461
(100 %)
0 diff
(100 %id)
DA985484 synovial membrane tissue from rheumatioidarthritis .d 42 to 589 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DA998843 breast, tumor tissue .d 38 to 615 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA999005 breast, tumor tissue .d 10 to 592 2 to 584   tiling clone, capped   583/583
(100 %)
0 diff
(100 %id)
DB000447 breast, tumor tissue .d 65 to 598 2 to 535   capped   534/534
(100 %)
0 diff
(100 %id)
DB002313 breast, tumor tissue .d 61 to 570 2 to 511   capped   510/510
(100 %)
0 diff
(100 %id)
DN999591   .b 606 to 1186 1 to 586       586/586
(100 %)
9 diff
(98.5 %id)
DR004513 placenta .n 1443 to 2107 7 to 670       664/670
(99 %)
7 diff
(99.0 %id)
DN990837 brain, whole brain .vd 2834 to 3438 1 to 615       615/615
(100 %)
10 diff
(98.4 %id)
DR006150 Prostate .o 1 to 606 25 to 630 G159R L160A Y161V S163I K164Q ... tiling clone,   606/630
(96 %)
7 diff
(98.9 %id)
DN990704 brain, whole brain .e 1426 to 2085 1 to 660       660/660
(100 %)
6 diff
(99.1 %id)
DN992030 brain, whole brain .vd 2632 to 3175 9 to 552       544/552
(98 %)
6 diff
(99.0 %id)
DN992193 brain, whole brain .vd 2579 to 3169 9 to 599       591/600
(98 %)
1 diff
(99.9 %id)
BM144917 leukopheresis .e 2651 to 3015 429 to 65   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 365/367
(99 %)
0 diff
(100 %id)
BM148731 leukopheresis .e 2654 to 3010 372 to 17   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 356/362
(98 %)
4 diff
(98.9 %id)
BM153241 leukopheresis .e 2616 to 3016 416 to 17   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 400/405
(98 %)
6 diff
(98.6 %id)
BE245600 leukopheresis .f 63 to 442 1 to 380       380/380
(100 %)
3 diff
(99.3 %id)
BE245099 leukopheresis .e 2669 to 3012 344 to 1       344/344
(100 %)
3 diff
(99.2 %id)
BE245154 leukopheresis .e 1385 to 1723 1 to 340       340/341
(99 %)
13 diff
(96.2 %id)
BE244928 leukopheresis .r 1 to 509 509 to 1   tiling clone,   509/509
(100 %)
1 diff
(99.9 %id)
BE245062 leukopheresis .p 426 to 881 1 to 456   tiling clone,   456/456
(100 %)
4 diff
(99.2 %id)
BE245223 leukopheresis .e 1411 to 1907 1 to 497       497/497
(100 %)
5 diff
(99.0 %id)
DB007129 cervix, tumor tissue .d 64 to 638 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
DB007158 cervix, tumor tissue .d 61 to 621 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DB009540 colon, tumor tissue .d 74 to 612 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
DB009835 colon, tumor tissue .d 93 to 646 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DB010069 colon, tumor tissue .d 75 to 596 2 to 523   capped   522/522
(100 %)
1 diff
(99.9 %id)
DB010467 colon, tumor tissue .d 63 to 585 2 to 524   capped   523/523
(100 %)
0 diff
(100 %id)
DB010596 colon, tumor tissue .e 1424 to 1903 2 to 481   capped   480/480
(100 %)
0 diff
(100 %id)
DC393659 colon, tumor tissue .k 39 to 609 1 to 572       572/572
(100 %)
1 diff
(99.9 %id)
DC393662 colon, tumor tissue .k 1 to 515 10 to 524       515/515
(100 %)
2 diff
(99.7 %id)
DC393664 colon, tumor tissue .k 1 to 558 10 to 567   tiling clone,   558/558
(100 %)
1 diff
(99.9 %id)
DB012287 esophageal, tumor tissue .e 1390 to 1885 9 to 504   capped   496/496
(100 %)
0 diff
(100 %id)
DB019372 esophageal, tumor tissue .d 37 to 596 2 to 562   capped   561/561
(100 %)
2 diff
(99.7 %id)
DB022036 testis .a 232 to 793 2 to 568   tiling clone, capped   567/567
(100 %)
3 diff
(99.5 %id)
DB336030 testis .a 2173 to 2743 570 to 1       570/570
(100 %)
6 diff
(99.0 %id)
DB035014 testis .e 1424 to 1973 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DB081517 testis .h 1 to 557 2 to 559   tiling clone, capped   558/558
(100 %)
2 diff
(99.7 %id)
DB340857 testis .h 2297 to 2847 551 to 1   tiling clone,   551/551
(100 %)
3 diff
(99.5 %id)
DB105710 thymus .r 437 to 988 2 to 553   capped   552/554
(99 %)
1 diff
(99.9 %id)
DB120726 thymus .e 1413 to 1763 2 to 352   capped   351/351
(100 %)
1 diff
(99.8 %id)
DB134774 thymus .b 2125 to 2625 2 to 504   tiling clone, capped   503/503
(100 %)
2 diff
(99.7 %id)
DB164887 thymus .r 203 to 791 2 to 590   capped   589/589
(100 %)
1 diff
(99.9 %id)
TI_149297442   .e 2134 to 3010 965 to 100   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 866/950
(91 %)
20 diff
(97.9 %id)
TI_149302746   .e 2293 to 3010 782 to 67   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 716/964
(74 %)
4 diff
(99.6 %id)
TI_149311886   .e 2041 to 3010 1048 to 93   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 956/998
(95 %)
20 diff
(98.0 %id)
TI_154139073   .e 1444 to 1998 79 to 633       555/623
(89 %)
15 diff
(97.6 %id)
TI_154139819   .d 339 to 934 81 to 675       595/599
(99 %)
24 diff
(96.0 %id)
TI_154187747   .e 1442 to 2211 123 to 885       763/890
(85 %)
12 diff
(98.7 %id)
TI_154188480   .e 1459 to 2219 104 to 859       756/926
(81 %)
25 diff
(97.4 %id)
TI_227713341   .e 2338 to 3013 774 to 104       671/1093
(61 %)
0 diff
(100 %id)
TI_227713941   .e 2223 to 3010 876 to 94   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 783/959
(81 %)
7 diff
(99.3 %id)
DB184044 liver, tumor tissue .d 49 to 609 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DB191235 lung, tumor tissue .e 1385 to 1965 2 to 582   capped   581/581
(100 %)
1 diff
(99.9 %id)
DB194199 ovary, tumor tissue .e 1398 to 1870 2 to 474   capped   473/473
(100 %)
0 diff
(100 %id)
DB217864 trachea .e 1412 to 1885 2 to 475   capped   474/474
(100 %)
1 diff
(99.8 %id)
DB243183 stomach, tumor tissue .d 75 to 651 2 to 578   capped   577/577
(100 %)
2 diff
(99.7 %id)
U43586   .c 678 to 2721 69 to 2117 exact tiling clone,   2049/2126
(96 %)
8 diff
(99.7 %id)
BM982503 lung, Primary Lung Cystic Fibrosis EpithelialCells .e 2331 to 3010 697 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 679/679
(100 %)
5 diff
(99.3 %id)
BM980890 lung, Primary Lung Cystic Fibrosis EpithelialCells .e 2331 to 3010 695 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 677/677
(100 %)
3 diff
(99.6 %id)
BM977636 lung, Primary Lung Cystic Fibrosis EpithelialCells .e 2275 to 3010 754 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 736/736
(100 %)
0 diff
(100 %id)
CA314332 Human Lung Epithelial cells, lung .e 2331 to 3015 702 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 684/684
(100 %)
1 diff
(99.9 %id)
CA503004 Human Lung Epithelial cells, lung .e 2503 to 3010 526 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 508/508
(100 %)
0 diff
(100 %id)
CB243483 Human Lung Epithelial cells, lung .d 29 to 801 1 to 771     Submitted on the opposite strand 771/771
(100 %)
5 diff
(99.4 %id)
BM694294 eye, RPE and Choroid .e 2213 to 2556 1 to 344   fully sequenced, Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 344/344
(100 %)
0 diff
(100 %id)
BU730413 eye, RPE and Choroid .e 2526 to 3016 508 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 490/490
(100 %)
0 diff
(100 %id)
BU731816 eye, RPE and Choroid .e 2643 to 3012 388 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 370/371
(99 %)
6 diff
(98.4 %id)
BU732057 eye, RPE and Choroid .e 2551 to 3001 469 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 451/451
(100 %)
5 diff
(98.9 %id)
BM705202 eye, RPE and Choroid .e 2408 to 2722 1 to 315   fully sequenced, Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 315/315
(100 %)
1 diff
(99.7 %id)
BU734468 eye, RPE and Choroid .e 2692 to 3010 337 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 319/319
(100 %)
1 diff
(99.7 %id)
BM666584 eye, optic nerve .e 2493 to 3010 536 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 518/518
(100 %)
0 diff
(100 %id)
CA427988 Bone, Subchondral Bone .e 2488 to 3016 547 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 529/529
(100 %)
3 diff
(99.5 %id)
CA748883 Bone, Subchondral Bone .e 2502 to 3016 533 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 515/515
(100 %)
0 diff
(100 %id)
CN480467 lung, Lung Focal Fibrosis .d 45 to 601 13 to 569     Submitted on the opposite strand 557/557
(100 %)
4 diff
(99.3 %id)
CA411649 Knee, Osteoarthritic Cartilage .e 2370 to 3003 652 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 634/634
(100 %)
0 diff
(100 %id)
CA305969 Alveolar Macrophage, lung .e 2380 to 3016 654 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 636/636
(100 %)
1 diff
(99.9 %id)
CD367651 Alveolar Macrophage, lung .e 2405 to 3013 624 to 18       607/624
(97 %)
0 diff
(100 %id)
CD369694 Alveolar Macrophage, lung .e 2562 to 3016 473 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 455/455
(100 %)
2 diff
(99.6 %id)
CB528854 Aveolar Macrophage, lung .e 2420 to 3016 614 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 596/596
(100 %)
2 diff
(99.7 %id)
CD364683 Alveolar Macrophage, lung .e 2267 to 3010 761 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 743/743
(100 %)
3 diff
(99.6 %id)
TI_151767999   .e 2293 to 2864 110 to 689       580/682
(85 %)
11 diff
(98.4 %id)
DB253056 uterus .vd 2233 to 2802 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DB351220 uterus .vd 4593 to 5130 538 to 1       538/538
(100 %)
0 diff
(100 %id)
DB271669 uterus .vd 2851 to 3412 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
BJ998034.
matches multiple genes
Wilms tumor .vd 4656 to 4937 281 to 1     also hits gene C7orf55andLUC7L2 281/281
(100 %)
2 diff
(99.3 %id)
TI_1210518336   .vj 20 to 675 17 to 671 V16G L24M S25* tiling clone, AAA   655/783
(83 %)
30 diff
(96.2 %id)
TI_1210518242   .vj 1 to 647 648 to 4 exact tiling clone,   645/804
(80 %)
4 diff
(99.6 %id)
Z49107 spleen (involved in Hodgkins disease .e 1412 to 3010 32 to 1630 K88R S135F P238L E281G AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 1599/1630
(98 %)
10 diff
(99.4 %id)
BF883419 lung_tumor .e 1387 to 1933 2 to 548     This clone was ignored 547/547
(100 %)
1 diff
(99.9 %id)
BF897341 marrow .p 1 to 591 2 to 592     This clone was ignored 591/591
(100 %)
2 diff
(99.7 %id)
BG192136   .p 18 to 576 2 to 560     Suspected internal deletion, this clone was ignored 559/559
(100 %)
0 diff
(100 %id)
AI041075   .d 64 to 630 2 to 569     This clone was ignored 568/568
(100 %)
1 diff
(99.9 %id)
AI168521 liver and spleen .d 74 to 596 11 to 533     Suspected internal deletion, this clone was ignored 523/523
(100 %)
0 diff
(100 %id)
AI918815 pooled germ cell tumors .d 109 to 934 1 to 833     Suspected internal deletion, this clone was ignored 833/844
(98 %)
10 diff
(98.9 %id)
AI673181 colon, colonic mucosa from 3 patients with Crohn'sdisease .d 67 to 851 1 to 790     Suspected internal deletion, this clone was ignored 790/793
(99 %)
13 diff
(98.4 %id)
AW269973 pooled .d 471 to 1168 1 to 697     Suspected internal deletion, this clone was ignored 697/697
(100 %)
2 diff
(99.8 %id)
BI767836 pooled lung and spleen .d 58 to 866 1 to 812     Suspected internal deletion, suspected internal deletion, this clone was ignored 812/813
(99 %)
9 diff
(98.9 %id)
TI_57183926   .e 1399 to 2276 1 to 881     Suspected internal deletion, suspected internal deletion, this clone was ignored 881/881
(100 %)
6 diff
(99.4 %id)
DB003373 breast, tumor tissue .e 2129 to 2469 1 to 342   capped Suspected internal deletion, this clone was ignored 342/342
(100 %)
5 diff
(98.6 %id)
DB335234 breast, tumor tissue .e 1440 to 2276 1 to 840     Suspected internal deletion, this clone was ignored 840/841
(99 %)
6 diff
(99.3 %id)
TI_149288867   .e 1965 to 2501 1 to 537     This clone was ignored 537/537
(100 %)
0 diff
(100 %id)
DB212018 trachea .e 1965 to 2501 1 to 537   capped This clone was ignored 537/537
(100 %)
0 diff
(100 %id)
DB348802 trachea .e 2203 to 2807 1 to 605     This clone was ignored 605/605
(100 %)
2 diff
(99.7 %id)
CB854701 lung .d 74 to 653 1 to 580     This clone was ignored 580/580
(100 %)
2 diff
(99.7 %id)
BM797433 stomach .e 2527 to 3002 1 to 477       477/477
(100 %)
2 diff
(99.6 %id)
BM818391 stomach .d 63 to 625 1 to 563       563/563
(100 %)
0 diff
(100 %id)
BM818692 stomach .d 77 to 596 1 to 520       520/520
(100 %)
1 diff
(99.9 %id)
BM818695 stomach .d 63 to 582 1 to 520       520/520
(100 %)
2 diff
(99.7 %id)
DA918704 small intestine .vd 2843 to 3402 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA934978 Spleen .vi 748 to 1311 2 to 565   tiling clone, capped   564/564
(100 %)
4 diff
(99.3 %id)
DA936243 Spleen .m 488 to 1048 2 to 562   tiling clone, capped   561/561
(100 %)
1 diff
(99.9 %id)
DA937303 Spleen .r 486 to 1066 2 to 585   capped   584/584
(100 %)
4 diff
(99.4 %id)
DA938100 Spleen .e 1414 to 2009 2 to 597   capped   596/596
(100 %)
0 diff
(100 %id)
DA940775 Spleen .d 63 to 648 2 to 587   capped   586/586
(100 %)
4 diff
(99.4 %id)
DA944305 Spleen .vp -9 to 546 2 to 557 G5S tiling clone, capped   556/556
(100 %)
1 diff
(99.9 %id)
DA944520 Spleen .d 41 to 585 2 to 547   capped   546/546
(100 %)
3 diff
(99.5 %id)
DA949637 Spleen .i 2 to 573 2 to 576   capped   575/575
(100 %)
4 diff
(99.4 %id)
DA970789 synovial membrane tissue from rheumatioidarthritis .e 1413 to 1903 2 to 492   capped   491/491
(100 %)
3 diff
(99.4 %id)
DA971644 synovial membrane tissue from rheumatioidarthritis .e 1398 to 1921 2 to 525   capped   524/524
(100 %)
0 diff
(100 %id)
DA971767 synovial membrane tissue from rheumatioidarthritis .e 1414 to 1889 2 to 477   capped   476/476
(100 %)
0 diff
(100 %id)
DA972931 synovial membrane tissue from rheumatioidarthritis .e 1386 to 1950 2 to 566   capped   565/565
(100 %)
2 diff
(99.7 %id)
DA976411 synovial membrane tissue from rheumatioidarthritis .d 40 to 578 9 to 547   capped   539/539
(100 %)
2 diff
(99.7 %id)
DA978425 synovial membrane tissue from rheumatioidarthritis .e 1375 to 1835 2 to 462   capped   461/461
(100 %)
0 diff
(100 %id)
DA985484 synovial membrane tissue from rheumatioidarthritis .d 42 to 589 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DA998843 breast, tumor tissue .d 38 to 615 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA999005 breast, tumor tissue .d 10 to 592 2 to 584   tiling clone, capped   583/583
(100 %)
0 diff
(100 %id)
DB000447 breast, tumor tissue .d 65 to 598 2 to 535   capped   534/534
(100 %)
0 diff
(100 %id)
DB002313 breast, tumor tissue .d 61 to 570 2 to 511   capped   510/510
(100 %)
0 diff
(100 %id)
DN999591   .b 606 to 1186 1 to 586       586/586
(100 %)
9 diff
(98.5 %id)
DR004513 placenta .n 1443 to 2107 7 to 670       664/670
(99 %)
7 diff
(99.0 %id)
DN990837 brain, whole brain .vd 2834 to 3438 1 to 615       615/615
(100 %)
10 diff
(98.4 %id)
DN990837 brain, whole brain .vd 2834 to 3438 1 to 615       615/615
(100 %)
10 diff
(98.4 %id)
DR006150 Prostate .o 1 to 606 25 to 630 G159R L160A Y161V S163I K164Q ... tiling clone,   606/630
(96 %)
7 diff
(98.9 %id)
DN990704 brain, whole brain .e 1426 to 2085 1 to 660       660/660
(100 %)
6 diff
(99.1 %id)
DN990704 brain, whole brain .e 1426 to 2085 1 to 660       660/660
(100 %)
6 diff
(99.1 %id)
DN992030 brain, whole brain .vd 2632 to 3175 9 to 552       544/552
(98 %)
6 diff
(99.0 %id)
DN992030 brain, whole brain .vd 2632 to 3175 9 to 552       544/552
(98 %)
6 diff
(99.0 %id)
DN992193 brain, whole brain .vd 2579 to 3169 9 to 599       591/600
(98 %)
1 diff
(99.9 %id)
DN992193 brain, whole brain .vd 2579 to 3169 9 to 599       591/600
(98 %)
1 diff
(99.9 %id)
BM144917 leukopheresis .e 2651 to 3015 429 to 65   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 365/367
(99 %)
0 diff
(100 %id)
BM148731 leukopheresis .e 2654 to 3010 372 to 17   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 356/362
(98 %)
4 diff
(98.9 %id)
BM153241 leukopheresis .e 2616 to 3016 416 to 17   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 400/405
(98 %)
6 diff
(98.6 %id)
BE245600 leukopheresis .f 63 to 442 1 to 380       380/380
(100 %)
3 diff
(99.3 %id)
BE245099 leukopheresis .e 2669 to 3012 344 to 1       344/344
(100 %)
3 diff
(99.2 %id)
BE245154 leukopheresis .e 1385 to 1723 1 to 340       340/341
(99 %)
13 diff
(96.2 %id)
BE244928 leukopheresis .r 1 to 509 509 to 1   tiling clone,   509/509
(100 %)
1 diff
(99.9 %id)
BE245062 leukopheresis .p 426 to 881 1 to 456   tiling clone,   456/456
(100 %)
4 diff
(99.2 %id)
BE245223 leukopheresis .e 1411 to 1907 1 to 497       497/497
(100 %)
5 diff
(99.0 %id)
DB007129 cervix, tumor tissue .d 64 to 638 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
DB007158 cervix, tumor tissue .d 61 to 621 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DB009540 colon, tumor tissue .d 74 to 612 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
DB009835 colon, tumor tissue .d 93 to 646 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DB010069 colon, tumor tissue .d 75 to 596 2 to 523   capped   522/522
(100 %)
1 diff
(99.9 %id)
DB010467 colon, tumor tissue .d 63 to 585 2 to 524   capped   523/523
(100 %)
0 diff
(100 %id)
DB010596 colon, tumor tissue .e 1424 to 1903 2 to 481   capped   480/480
(100 %)
0 diff
(100 %id)
DC393659 colon, tumor tissue .k 39 to 609 1 to 572       572/572
(100 %)
1 diff
(99.9 %id)
DC393662 colon, tumor tissue .k 1 to 515 10 to 524       515/515
(100 %)
2 diff
(99.7 %id)
DC393664 colon, tumor tissue .k 1 to 558 10 to 567   tiling clone,   558/558
(100 %)
1 diff
(99.9 %id)
DB012287 esophageal, tumor tissue .e 1390 to 1885 9 to 504   capped   496/496
(100 %)
0 diff
(100 %id)
DB019372 esophageal, tumor tissue .d 37 to 596 2 to 562   capped   561/561
(100 %)
2 diff
(99.7 %id)
DB022036 testis .a 232 to 793 2 to 568   tiling clone, capped   567/567
(100 %)
3 diff
(99.5 %id)
DB336030 testis .a 2173 to 2743 570 to 1       570/570
(100 %)
6 diff
(99.0 %id)
DB035014 testis .e 1424 to 1973 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DB081517 testis .h 1 to 557 2 to 559   tiling clone, capped   558/558
(100 %)
2 diff
(99.7 %id)
DB340857 testis .h 2297 to 2847 551 to 1   tiling clone,   551/551
(100 %)
3 diff
(99.5 %id)
DB105710 thymus .r 437 to 988 2 to 553   capped   552/554
(99 %)
1 diff
(99.9 %id)
DB120726 thymus .e 1413 to 1763 2 to 352   capped   351/351
(100 %)
1 diff
(99.8 %id)
DB134774 thymus .b 2125 to 2625 2 to 504   tiling clone, capped   503/503
(100 %)
2 diff
(99.7 %id)
DB164887 thymus .r 203 to 791 2 to 590   capped   589/589
(100 %)
1 diff
(99.9 %id)
TI_149297442   .e 2134 to 3010 965 to 100   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 866/950
(91 %)
20 diff
(97.9 %id)
TI_149302746   .e 2293 to 3010 782 to 67   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 716/964
(74 %)
4 diff
(99.6 %id)
TI_149311886   .e 2041 to 3010 1048 to 93   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 956/998
(95 %)
20 diff
(98.0 %id)
TI_154139073   .e 1444 to 1998 79 to 633       555/623
(89 %)
15 diff
(97.6 %id)
TI_154139819   .d 339 to 934 81 to 675       595/599
(99 %)
24 diff
(96.0 %id)
TI_154187747   .e 1442 to 2211 123 to 885       763/890
(85 %)
12 diff
(98.7 %id)
TI_154188480   .e 1459 to 2219 104 to 859       756/926
(81 %)
25 diff
(97.4 %id)
TI_227713341   .e 2338 to 3013 774 to 104       671/1093
(61 %)
0 diff
(100 %id)
TI_227713941   .e 2223 to 3010 876 to 94   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 783/959
(81 %)
7 diff
(99.3 %id)
DB184044 liver, tumor tissue .d 49 to 609 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DB191235 lung, tumor tissue .e 1385 to 1965 2 to 582   capped   581/581
(100 %)
1 diff
(99.9 %id)
DB194199 ovary, tumor tissue .e 1398 to 1870 2 to 474   capped   473/473
(100 %)
0 diff
(100 %id)
DB217864 trachea .e 1412 to 1885 2 to 475   capped   474/474
(100 %)
1 diff
(99.8 %id)
DB243183 stomach, tumor tissue .d 75 to 651 2 to 578   capped   577/577
(100 %)
2 diff
(99.7 %id)
U43586   .c 678 to 2721 69 to 2117 exact tiling clone,   2049/2126
(96 %)
8 diff
(99.7 %id)
BM982503 lung, Primary Lung Cystic Fibrosis EpithelialCells .e 2331 to 3010 697 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 679/679
(100 %)
5 diff
(99.3 %id)
BM982503 lung, Primary Lung Cystic Fibrosis EpithelialCells .e 2331 to 3010 697 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 679/679
(100 %)
5 diff
(99.3 %id)
BM980890 lung, Primary Lung Cystic Fibrosis EpithelialCells .e 2331 to 3010 695 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 677/677
(100 %)
3 diff
(99.6 %id)
BM980890 lung, Primary Lung Cystic Fibrosis EpithelialCells .e 2331 to 3010 695 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 677/677
(100 %)
3 diff
(99.6 %id)
BM977636 lung, Primary Lung Cystic Fibrosis EpithelialCells .e 2275 to 3010 754 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 736/736
(100 %)
0 diff
(100 %id)
BM977636 lung, Primary Lung Cystic Fibrosis EpithelialCells .e 2275 to 3010 754 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 736/736
(100 %)
0 diff
(100 %id)
CA314332 Human Lung Epithelial cells, lung .e 2331 to 3015 702 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 684/684
(100 %)
1 diff
(99.9 %id)
CA314332 Human Lung Epithelial cells, lung .e 2331 to 3015 702 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 684/684
(100 %)
1 diff
(99.9 %id)
CA503004 Human Lung Epithelial cells, lung .e 2503 to 3010 526 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 508/508
(100 %)
0 diff
(100 %id)
CA503004 Human Lung Epithelial cells, lung .e 2503 to 3010 526 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 508/508
(100 %)
0 diff
(100 %id)
CB243483 Human Lung Epithelial cells, lung .d 29 to 801 1 to 771     Submitted on the opposite strand 771/771
(100 %)
5 diff
(99.4 %id)
CB243483 Human Lung Epithelial cells, lung .d 29 to 801 1 to 771     Submitted on the opposite strand 771/771
(100 %)
5 diff
(99.4 %id)
BM694294 eye, RPE and Choroid .e 2213 to 2556 1 to 344   fully sequenced, Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 344/344
(100 %)
0 diff
(100 %id)
BM694294 eye, RPE and Choroid .e 2213 to 2556 1 to 344   fully sequenced, Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 344/344
(100 %)
0 diff
(100 %id)
BU730413 eye, RPE and Choroid .e 2526 to 3016 508 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 490/490
(100 %)
0 diff
(100 %id)
BU730413 eye, RPE and Choroid .e 2526 to 3016 508 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 490/490
(100 %)
0 diff
(100 %id)
BU731816 eye, RPE and Choroid .e 2643 to 3012 388 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 370/371
(99 %)
6 diff
(98.4 %id)
BU731816 eye, RPE and Choroid .e 2643 to 3012 388 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 370/371
(99 %)
6 diff
(98.4 %id)
BU732057 eye, RPE and Choroid .e 2551 to 3001 469 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 451/451
(100 %)
5 diff
(98.9 %id)
BU732057 eye, RPE and Choroid .e 2551 to 3001 469 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 451/451
(100 %)
5 diff
(98.9 %id)
BM705202 eye, RPE and Choroid .e 2408 to 2722 1 to 315   fully sequenced, Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 315/315
(100 %)
1 diff
(99.7 %id)
BM705202 eye, RPE and Choroid .e 2408 to 2722 1 to 315   fully sequenced, Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 315/315
(100 %)
1 diff
(99.7 %id)
BU734468 eye, RPE and Choroid .e 2692 to 3010 337 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 319/319
(100 %)
1 diff
(99.7 %id)
BU734468 eye, RPE and Choroid .e 2692 to 3010 337 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 319/319
(100 %)
1 diff
(99.7 %id)
BM666584 eye, optic nerve .e 2493 to 3010 536 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 518/518
(100 %)
0 diff
(100 %id)
BM666584 eye, optic nerve .e 2493 to 3010 536 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 518/518
(100 %)
0 diff
(100 %id)
CA427988 Bone, Subchondral Bone .e 2488 to 3016 547 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 529/529
(100 %)
3 diff
(99.5 %id)
CA427988 Bone, Subchondral Bone .e 2488 to 3016 547 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 529/529
(100 %)
3 diff
(99.5 %id)
CA748883 Bone, Subchondral Bone .e 2502 to 3016 533 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 515/515
(100 %)
0 diff
(100 %id)
CA748883 Bone, Subchondral Bone .e 2502 to 3016 533 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 515/515
(100 %)
0 diff
(100 %id)
CN480467 lung, Lung Focal Fibrosis .d 45 to 601 13 to 569     Submitted on the opposite strand 557/557
(100 %)
4 diff
(99.3 %id)
CN480467 lung, Lung Focal Fibrosis .d 45 to 601 13 to 569     Submitted on the opposite strand 557/557
(100 %)
4 diff
(99.3 %id)
CA411649 Knee, Osteoarthritic Cartilage .e 2370 to 3003 652 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 634/634
(100 %)
0 diff
(100 %id)
CA411649 Knee, Osteoarthritic Cartilage .e 2370 to 3003 652 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 634/634
(100 %)
0 diff
(100 %id)
CA305969 Alveolar Macrophage, lung .e 2380 to 3016 654 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 636/636
(100 %)
1 diff
(99.9 %id)
CA305969 Alveolar Macrophage, lung .e 2380 to 3016 654 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 636/636
(100 %)
1 diff
(99.9 %id)
CD367651 Alveolar Macrophage, lung .e 2405 to 3013 624 to 18       607/624
(97 %)
0 diff
(100 %id)
CD367651 Alveolar Macrophage, lung .e 2405 to 3013 624 to 18       607/624
(97 %)
0 diff
(100 %id)
CD369694 Alveolar Macrophage, lung .e 2562 to 3016 473 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 455/455
(100 %)
2 diff
(99.6 %id)
CD369694 Alveolar Macrophage, lung .e 2562 to 3016 473 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 455/455
(100 %)
2 diff
(99.6 %id)
CB528854 Aveolar Macrophage, lung .e 2420 to 3016 614 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 596/596
(100 %)
2 diff
(99.7 %id)
CB528854 Aveolar Macrophage, lung .e 2420 to 3016 614 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 596/596
(100 %)
2 diff
(99.7 %id)
CD364683 Alveolar Macrophage, lung .e 2267 to 3010 761 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 743/743
(100 %)
3 diff
(99.6 %id)
CD364683 Alveolar Macrophage, lung .e 2267 to 3010 761 to 19   AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 743/743
(100 %)
3 diff
(99.6 %id)
TI_151767999   .e 2293 to 2864 110 to 689       580/682
(85 %)
11 diff
(98.4 %id)
DB253056 uterus .vd 2233 to 2802 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DB351220 uterus .vd 4593 to 5130 538 to 1       538/538
(100 %)
0 diff
(100 %id)
DB271669 uterus .vd 2851 to 3412 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
BJ998034.
matches multiple genes
Wilms tumor .vd 4656 to 4937 281 to 1     also hits gene C7orf55andLUC7L2 281/281
(100 %)
2 diff
(99.3 %id)
TI_1210518336   .vj 20 to 675 17 to 671 V16G L24M S25* tiling clone, AAA   655/783
(83 %)
30 diff
(96.2 %id)
TI_1210518242   .vj 1 to 647 648 to 4 exact tiling clone,   645/804
(80 %)
4 diff
(99.6 %id)
Z49107 spleen (involved in Hodgkins disease .e 1412 to 3010 32 to 1630 K88R S135F P238L E281G AAA Possibly primed on the genome, locally A rich (33/33 A in genome downstream of last aligned base) 1599/1630
(98 %)
10 diff
(99.4 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r, .s, .t, .u, .va-u, .vb, .vc-u, .vd, .ve-u, .vf, .vg, .vh, .vi, .vj, .vk-u, .vl, .vm-u, .vn-u, .vo-u, .vp, .vq-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI