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Gene KSR2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
46 supporting clones for gene KSR2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DW009881 pooled .a 1 to 323 323 to 1   tiling clone,   323/323
(100 %)
0 diff
(100 %id)
NM_173598.4   .a 1 to 17008 1 to 17008 exact RefSeq,   17008/17008
(100 %)
0 diff
(100 %id)
DW009880 pooled .a 147 to 477 81 to 411   tiling clone,   333/411
(81 %)
6 diff
(98.6 %id)
AY345972   .a 332 to 2821 1 to 2490   tiling clone,   2490/2490
(100 %)
1 diff
(100.0 %id)
BC127603 PCR rescued clones .a 332 to 2821 1 to 2490       2490/2490
(100 %)
2 diff
(100.0 %id)
BC107106 PCR rescued clones .a 337 to 2821 1 to 2485       2485/2486
(99 %)
2 diff
(100.0 %id)
BC107107 PCR rescued clones .a 337 to 2821 1 to 2485       2485/2486
(99 %)
2 diff
(100.0 %id)
BX950948   .a 3097 to 3669 1 to 573   tiling clone,   573/573
(100 %)
0 diff
(100 %id)
AW448905   .a 6145 to 6401 275 to 18   tiling clone, AAA   258/260
(99 %)
4 diff
(98.5 %id)
DB507663.
matches multiple genes
testis .a 6953 to 7390 436 to 1   tiling clone, also hits gene klorcho 436/436
(100 %)
19 diff
(95.7 %id)
DA112280 cerebellum .a 7604 to 8177 2 to 575   tiling clone, capped   574/574
(100 %)
2 diff
(99.7 %id)
DA103389 cerebellum .a 7609 to 8156 2 to 548   tiling clone, capped   547/547
(100 %)
1 diff
(99.9 %id)
BU941307 mixed (pool of 40 RNAs) .a 8860 to 9719 1 to 885   tiling clone,   885/951
(93 %)
58 diff
(94.0 %id)
AL712475 human skeletal muscle .a 8861 to 9457 7 to 603   tiling clone,   597/603
(99 %)
12 diff
(98.1 %id)
BE348444 carcinoid, lung .a 8908 to 9357 1 to 450     Submitted on the opposite strand 450/450
(100 %)
0 diff
(100 %id)
AV753172 Pituitary .a 10326 to 10845 1 to 513   tiling clone,   513/517
(99 %)
7 diff
(98.7 %id)
DA097076 cerebellum .a 10571 to 11054 2 to 485   tiling clone, fully sequenced, capped   484/484
(100 %)
0 diff
(100 %id)
CK003333 brain/CNS, Human Brain - Cerebellar Cortex .a 10850 to 11503 1 to 650       650/665
(97 %)
9 diff
(98.7 %id)
AL707565 human skeletal muscle .a 10860 to 11574 1 to 714       714/714
(100 %)
1 diff
(99.9 %id)
BX648958 human amygdala .a 10959 to 16965 1 to 6008   tiling clone, available from DKFZ, AAA   6008/6008
(100 %)
2 diff
(100.0 %id)
AL707596 human skeletal muscle .a 10963 to 11566 14 to 617       604/617
(97 %)
6 diff
(99.1 %id)
DB298786 cerebellum .a 11029 to 11603 575 to 1   fully sequenced,   575/575
(100 %)
5 diff
(99.2 %id)
DB299966 cerebellum .a 11039 to 11603 565 to 1       565/565
(100 %)
0 diff
(100 %id)
AI292005 carcinoid, lung .a 11083 to 11557 1 to 475     Submitted on the opposite strand 475/475
(100 %)
0 diff
(100 %id)
BP396176 pancreatic islet .a 11349 to 11561 1 to 213     Submitted on the opposite strand 213/214
(99 %)
3 diff
(98.6 %id)
DA325969 hippocampus .a 11880 to 12447 2 to 569   tiling clone, capped   568/568
(100 %)
1 diff
(99.9 %id)
BF851910 lung_normal .a 11882 to 12153 273 to 1     Submitted on the opposite strand 273/289
(94 %)
6 diff
(98.0 %id)
DA116975 cerebellum .a 12861 to 13398 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
DA212711 brain .a 13218 to 13780 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
BX475247   .a 13945 to 14501 1 to 559       559/559
(100 %)
2 diff
(99.7 %id)
Z45748 brain, total brain .a 14171 to 14409 1 to 238       238/238
(100 %)
1 diff
(99.6 %id)
DA172022 amygdala .a 14929 to 15493 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
AV753397 Pituitary .a 15114 to 15822 1 to 709       709/898
(78 %)
10 diff
(98.9 %id)
DA132861 alzheimer cortex .a 15348 to 15890 2 to 544   capped   543/543
(100 %)
1 diff
(99.9 %id)
Z43303 brain, total brain .a 15363 to 15734 1 to 371       371/371
(100 %)
2 diff
(99.5 %id)
R24848 whole brain .a 15364 to 15765 1 to 405       405/409
(99 %)
6 diff
(98.6 %id)
DB309381 hippocampus .a 15388 to 15947 560 to 1       560/560
(100 %)
1 diff
(99.9 %id)
BX106702 whole brain .a 16325 to 16965 654 to 15   AAA   640/640
(100 %)
2 diff
(99.7 %id)
BM702577 eye, human retina .a 16391 to 16975 1 to 585       585/585
(100 %)
0 diff
(100 %id)
AI692426 carcinoid, lung .a 16402 to 16971 571 to 2       570/571
(99 %)
0 diff
(100 %id)
DB304505 brain .a 16436 to 16984 549 to 1       549/549
(100 %)
1 diff
(99.9 %id)
DB301085 alzheimer cortex .a 16446 to 16984 540 to 1       540/540
(100 %)
3 diff
(99.5 %id)
BE671580 carcinoid, lung .a 16471 to 16965 506 to 13   AAA   494/494
(100 %)
3 diff
(99.4 %id)
AI832042 lymph node, lymphoma, follicular mixed small and largecell .a 16537 to 16975 439 to 1       439/439
(100 %)
1 diff
(99.8 %id)
AI298955 carcinoid, lung .a 16543 to 16966 431 to 8       424/431
(98 %)
0 diff
(100 %id)
BX489265 human skeletal muscle .a 16557 to 16984 496 to 69   AAA   428/428
(100 %)
6 diff
(98.6 %id)
DA058042 cerebellum .a 16588 to 17174 2 to 587   tiling clone, capped   586/586
(100 %)
2 diff
(99.7 %id)
AI763301 Kidney .a 16589 to 16965 411 to 35   AAA   377/377
(100 %)
1 diff
(99.8 %id)
T16755   .a 16671 to 16961 296 to 6       291/296
(98 %)
0 diff
(100 %id)
AA770581 carcinoid, lung .a 16700 to 16970 283 to 13   AAA   271/271
(100 %)
3 diff
(98.9 %id)
Z41400 brain, total brain .a 16758 to 16965 208 to 1       208/208
(100 %)
1 diff
(99.6 %id)
F02737 brain, total brain .a 16774 to 16962 187 to 3       185/187
(98 %)
0 diff
(100 %id)
AK098831 testis .b 1 to 1512 1 to 1512 exact tiling clone, available from FLJ,   1512/1512
(100 %)
2 diff
(99.9 %id)
BF948353 nervous_normal .c 1 to 473 488 to 16 A113P N114D T146Q A147P R149W tiling clone,   473/488
(96 %)
12 diff
(97.6 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI