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Gene KRT6BTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
223 supporting clones for gene KRT6B back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA433474 tongue, tumor tissue .a 1 to 760 2 to 762   tiling clone, capped   761/764
(99 %)
15 diff
(98.1 %id)
DB012197 esophageal, tumor tissue .a 13 to 579 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DA448299 tongue, tumor tissue .a 14 to 501 2 to 489   capped   488/488
(100 %)
0 diff
(100 %id)
DB013346 esophageal, tumor tissue .a 43 to 608 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA438145 tongue, tumor tissue .a 44 to 621 2 to 579   capped   578/578
(100 %)
2 diff
(99.7 %id)
DB011741 esophageal, tumor tissue .a 48 to 609 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DA433524 tongue, tumor tissue .a 53 to 569 2 to 518   capped   517/517
(100 %)
0 diff
(100 %id)
DA443893 tongue, tumor tissue .a 53 to 631 2 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
DA449040 tongue, tumor tissue .a 53 to 589 2 to 538   capped   537/537
(100 %)
2 diff
(99.7 %id)
DA450500 tongue, tumor tissue .a 53 to 278 2 to 228   capped   227/227
(100 %)
2 diff
(99.2 %id)
AU122320 mammary gland .a 53 to 790 2 to 744   capped   743/747
(99 %)
17 diff
(97.8 %id)
DA668922 esophagus .a 53 to 550 2 to 499   capped   498/498
(100 %)
1 diff
(99.8 %id)
DA448309 tongue, tumor tissue .a 55 to 608 2 to 555   capped   554/554
(100 %)
2 diff
(99.7 %id)
DA668122 esophagus .a 55 to 389 2 to 336   capped   335/335
(100 %)
0 diff
(100 %id)
DA761319 tongue .a 55 to 555 2 to 502   capped   501/501
(100 %)
0 diff
(100 %id)
DA667813 esophagus .a 82 to 621 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DA667875 esophagus .a 82 to 625 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DB012375 esophageal, tumor tissue .a 84 to 621 2 to 539   capped   538/538
(100 %)
1 diff
(99.9 %id)
DA441691 tongue, tumor tissue .a 85 to 582 2 to 499   capped   498/498
(100 %)
4 diff
(99.2 %id)
DA444193 tongue, tumor tissue .a 85 to 656 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA447559 tongue, tumor tissue .a 85 to 655 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA449849 tongue, tumor tissue .a 85 to 636 2 to 555   capped   554/554
(100 %)
4 diff
(99.3 %id)
DA451143 tongue, tumor tissue .a 85 to 640 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
AU122418 mammary gland .a 85 to 719 2 to 636   capped   635/635
(100 %)
1 diff
(99.9 %id)
DB011733 esophageal, tumor tissue .a 85 to 640 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DB013430 esophageal, tumor tissue .a 85 to 673 2 to 590   capped   589/589
(100 %)
1 diff
(99.9 %id)
DB013475 esophageal, tumor tissue .a 85 to 653 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DB014081 esophageal, tumor tissue .a 85 to 652 2 to 569   capped   568/568
(100 %)
4 diff
(99.3 %id)
DB014196 esophageal, tumor tissue .a 85 to 582 2 to 499   capped   498/498
(100 %)
2 diff
(99.6 %id)
DB014275 esophageal, tumor tissue .a 85 to 621 2 to 538   capped   537/537
(100 %)
1 diff
(99.9 %id)
DB014426 esophageal, tumor tissue .a 85 to 594 2 to 511   capped   510/510
(100 %)
0 diff
(100 %id)
DB014760 esophageal, tumor tissue .a 85 to 663 2 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
DB014934 esophageal, tumor tissue .a 85 to 582 2 to 499   capped   498/498
(100 %)
1 diff
(99.8 %id)
DB015294 esophageal, tumor tissue .a 85 to 555 2 to 473   capped   472/472
(100 %)
2 diff
(99.6 %id)
DB015619 esophageal, tumor tissue .a 85 to 561 2 to 478   capped   477/477
(100 %)
0 diff
(100 %id)
DB017042 esophageal, tumor tissue .a 85 to 655 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DB017061 esophageal, tumor tissue .a 85 to 398 2 to 315   capped   314/314
(100 %)
1 diff
(99.7 %id)
DB018403 esophageal, tumor tissue .a 85 to 644 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DB014707 esophageal, tumor tissue .a 87 to 655 2 to 572   capped   571/571
(100 %)
3 diff
(99.5 %id)
DA442916 tongue, tumor tissue .a 88 to 640 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
DB046917 testis .a 88 to 640 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
BE932624.
matches multiple genes
head_neck .a 92 to 245 156 to 6     also hits gene KRT6AandKRT6C 151/156
(96 %)
0 diff
(100 %id)
BF088609 head_neck .a 92 to 232 142 to 2       141/142
(99 %)
0 diff
(100 %id)
BF088687 head_neck .a 92 to 232 142 to 2       141/142
(99 %)
0 diff
(100 %id)
BF356168 head_neck .a 92 to 357 266 to 2       265/266
(99 %)
0 diff
(100 %id)
BG678622 skin, squamous cell carcinoma .a 96 to 871 1 to 799       799/801
(99 %)
58 diff
(92.8 %id)
BM809989 astrocytoma grade IV, cell line, brain .a 97 to 601 26 to 530       505/1176
(42 %)
17 diff
(98.6 %id)
DA451017 tongue, tumor tissue .a 100 to 669 2 to 572   capped   571/571
(100 %)
4 diff
(99.3 %id)
BM910318 astrocytoma grade IV, cell line, brain .a 102 to 499 10 to 407       398/1202
(33 %)
2 diff
(99.9 %id)
BG675776 skin, squamous cell carcinoma .a 104 to 694 1 to 587       587/862
(68 %)
18 diff
(98.0 %id)
NM_005555.3   .a 104 to 2383 1 to 2280 exact RefSeq, AAA   2280/2280
(100 %)
0 diff
(100 %id)
BG676120 skin, squamous cell carcinoma .a 105 to 902 1 to 806       806/814
(99 %)
17 diff
(98.0 %id)
BG679268 skin, squamous cell carcinoma .a 109 to 903 1 to 803       803/926
(86 %)
12 diff
(98.8 %id)
BM017399 astrocytoma grade IV, cell line, brain .a 115 to 766 1 to 661       661/813
(81 %)
31 diff
(96.2 %id)
L42612   .a 115 to 1954 1 to 1840 exact tiling clone,   1840/1840
(100 %)
5 diff
(99.8 %id)
TI_59387651   .a 116 to 766 101 to 760       660/812
(81 %)
30 diff
(96.4 %id)
TI_59390877   .a 117 to 778 104 to 765       662/662
(100 %)
10 diff
(98.5 %id)
BM913726 astrocytoma grade IV, cell line, brain .a 118 to 451 1 to 334       334/1213
(27 %)
10 diff
(99.2 %id)
DA446098 tongue, tumor tissue .a 120 to 660 2 to 544   capped   543/547
(99 %)
4 diff
(99.3 %id)
BG679505 skin, squamous cell carcinoma .a 134 to 914 1 to 793       793/829
(95 %)
21 diff
(97.5 %id)
TI_59387380.
matches multiple genes
  .a 139 to 694 97 to 663     also hits gene KRT6AandKRT6C 567/901
(62 %)
35 diff
(96.2 %id)
BE718354 head_neck .a 144 to 459 1 to 316       316/316
(100 %)
0 diff
(100 %id)
TI_1948080998   .a 151 to 969 127 to 944   fully sequenced,   818/944
(86 %)
9 diff
(99.1 %id)
TI_1948081173   .a 151 to 906 128 to 887       760/1223
(62 %)
16 diff
(98.7 %id)
TI_1948081526   .a 151 to 945 130 to 924       795/1273
(62 %)
19 diff
(98.6 %id)
AW860699 colon .a 279 to 632 1 to 353       353/353
(100 %)
2 diff
(99.5 %id)
BG945769.
matches multiple genes
bladder_tumor .a 357 to 596 247 to 10     also hits gene KRT6AandKRT6C 238/247
(96 %)
0 diff
(100 %id)
BF155587 head_neck .a 549 to 640 2 to 92       91/104
(87 %)
4 diff
(96.2 %id)
CV405449 head_neck .a 571 to 845 345 to 67     Submitted on the opposite strand 279/345
(80 %)
7 diff
(98.0 %id)
BQ348315 head_neck .a 700 to 1117 425 to 8       418/425
(98 %)
1 diff
(99.8 %id)
BG698174 skin .a 745 to 1570 1 to 837       837/906
(92 %)
27 diff
(97.1 %id)
BQ349872 head_neck .a 771 to 1135 375 to 12       364/392
(92 %)
0 diff
(100 %id)
CV315021.
matches multiple genes
head_neck .a 777 to 1156 1 to 387     also hits gene KRT6AandKRT6C 387/387
(100 %)
25 diff
(93.6 %id)
CV315213.
matches multiple genes
head_neck .a 777 to 1156 1 to 387     also hits gene KRT6AandKRT6C 387/387
(100 %)
25 diff
(93.6 %id)
BI335818 skin .a 800 to 1220 1 to 421       421/421
(100 %)
0 diff
(100 %id)
BF149190 skin .a 801 to 1133 1 to 333       333/333
(100 %)
2 diff
(99.4 %id)
BF149428 skin .a 801 to 1133 1 to 333       333/333
(100 %)
2 diff
(99.4 %id)
CV314780.
matches multiple genes
head_neck .a 810 to 1124 350 to 35     Submitted on the opposite strand, also hits gene KRT6AandKRT6C 316/350
(90 %)
20 diff
(94.3 %id)
BQ351425.
matches multiple genes
head_neck .a 865 to 1082 218 to 1     also hits gene KRT6AandKRT6C 218/231
(94 %)
2 diff
(99.2 %id)
BQ348028 head_neck .a 870 to 1089 1 to 218       218/218
(100 %)
4 diff
(98.2 %id)
BQ357614 head_neck .a 870 to 1466 1 to 597       597/600
(99 %)
9 diff
(98.5 %id)
CV375090 bladder_tumor .a 909 to 1194 39 to 323       283/323
(87 %)
7 diff
(97.9 %id)
AI540872 Tissue culture .a 925 to 1323 15 to 414       400/871
(45 %)
9 diff
(99.0 %id)
BG677892 skin, squamous cell carcinoma .a 929 to 1745 1 to 821       821/956
(85 %)
15 diff
(98.5 %id)
BQ354200.
matches multiple genes
head_neck .a 931 to 1156 228 to 3     also hits gene KRT6AandKRT6C 226/228
(99 %)
1 diff
(99.6 %id)
CV318819 head_neck .a 934 to 1311 1 to 379       377/379
(99 %)
10 diff
(97.4 %id)
TI_1948080999   .a 937 to 1852 1039 to 122   fully sequenced,   918/1039
(88 %)
11 diff
(99.0 %id)
TI_1948081174   .a 966 to 1852 1006 to 120       887/1265
(70 %)
11 diff
(99.2 %id)
TI_1948081527   .a 969 to 1852 1002 to 119       884/1279
(69 %)
12 diff
(99.1 %id)
AW381683.
matches multiple genes
head_neck .a 974 to 1160 34 to 221     also hits gene KRT6AandKRT6C 188/224
(83 %)
11 diff
(95.1 %id)
BQ348324.
matches multiple genes
head_neck .a 974 to 1160 14 to 200     also hits gene KRT6AandKRT6C 187/203
(92 %)
11 diff
(94.6 %id)
BG677272 skin, squamous cell carcinoma .a 1002 to 1548 1 to 547       547/547
(100 %)
0 diff
(100 %id)
BG679916 skin, squamous cell carcinoma .a 1012 to 1809 1 to 798       798/803
(99 %)
6 diff
(99.3 %id)
BF831750.
matches multiple genes
head_neck .a 1016 to 1227 1 to 218     also hits gene KRT6AandKRT6C 218/247
(88 %)
19 diff
(92.4 %id)
BQ351659 head_neck .a 1018 to 1280 2 to 264       263/264
(99 %)
9 diff
(96.6 %id)
CV396843 head_neck .a 1032 to 1343 1 to 312       312/312
(100 %)
6 diff
(98.1 %id)
CV396845 head_neck .a 1036 to 1343 7 to 314       308/314
(98 %)
6 diff
(98.1 %id)
BE714856.
matches multiple genes
head_neck .a 1042 to 1280 14 to 251     also hits gene KRT6AandKRT6C 238/251
(94 %)
6 diff
(97.7 %id)
BG682406 skin, squamous cell carcinoma .a 1044 to 1860 1 to 829       829/884
(93 %)
22 diff
(97.6 %id)
BG677378 skin, squamous cell carcinoma .a 1059 to 1650 15 to 604       597/607
(98 %)
7 diff
(98.9 %id)
BG676346 skin, squamous cell carcinoma .a 1062 to 1975 1 to 913       913/927
(98 %)
30 diff
(96.8 %id)
BG677131 skin, squamous cell carcinoma .a 1062 to 1940 1 to 894       894/894
(100 %)
40 diff
(95.6 %id)
BG678706 skin, squamous cell carcinoma .a 1084 to 1930 1 to 848       848/848
(100 %)
2 diff
(99.8 %id)
BG677884 skin, squamous cell carcinoma .a 1117 to 1998 1 to 886       886/887
(99 %)
19 diff
(97.9 %id)
CV360854 head_neck .a 1119 to 1646 1 to 528       528/528
(100 %)
9 diff
(98.3 %id)
BG677840 skin, squamous cell carcinoma .a 1120 to 1898 1 to 779       779/779
(100 %)
9 diff
(98.9 %id)
BG676755 skin, squamous cell carcinoma .a 1136 to 1937 1 to 808       808/810
(99 %)
20 diff
(97.6 %id)
BG680367 skin, squamous cell carcinoma .a 1136 to 1715 1 to 580       580/580
(100 %)
2 diff
(99.7 %id)
BG679785 skin, squamous cell carcinoma .a 1138 to 2059 1 to 933       933/936
(99 %)
29 diff
(97.0 %id)
BG678300 skin, squamous cell carcinoma .a 1141 to 2106 1 to 963       963/974
(98 %)
40 diff
(95.9 %id)
BF357093 head_neck .a 1145 to 1348 216 to 17       200/216
(92 %)
0 diff
(100 %id)
BG681900 skin, squamous cell carcinoma .a 1145 to 1913 1 to 768       768/768
(100 %)
3 diff
(99.7 %id)
BF834355.
matches multiple genes
head_neck .a 1152 to 1320 11 to 179     also hits gene KRT6AandKRT6C 169/179
(94 %)
9 diff
(95.0 %id)
BG676569 skin, squamous cell carcinoma .a 1175 to 2108 1 to 939       939/944
(99 %)
13 diff
(98.7 %id)
BE182884.
matches multiple genes
head_neck .a 1176 to 1295 2 to 121     also hits gene KRT6AandKRT6C 120/121
(99 %)
10 diff
(91.8 %id)
BG681573 skin, squamous cell carcinoma .a 1185 to 2065 1 to 878       878/878
(100 %)
12 diff
(98.7 %id)
BG681287 skin, squamous cell carcinoma .a 1198 to 1954 1 to 758       758/758
(100 %)
6 diff
(99.3 %id)
CV353114 bladder_tumor .a 1227 to 1797 22 to 591       572/591
(96 %)
9 diff
(98.5 %id)
CV379503 bladder_tumor .a 1228 to 1818 1 to 590       590/590
(100 %)
11 diff
(98.2 %id)
BG681728 skin, squamous cell carcinoma .a 1233 to 2064 1 to 834       834/834
(100 %)
19 diff
(97.8 %id)
CV316046 nervous_tumor .a 1235 to 1622 1 to 387       387/387
(100 %)
8 diff
(98.0 %id)
CV316053 nervous_tumor .a 1235 to 1622 1 to 387       387/387
(100 %)
8 diff
(98.0 %id)
BG678751 skin, squamous cell carcinoma .a 1243 to 2043 1 to 799       799/800
(99 %)
12 diff
(98.5 %id)
BG676467 skin, squamous cell carcinoma .a 1271 to 2070 1 to 803       803/855
(93 %)
6 diff
(99.3 %id)
CU454721 epidermis .a 1273 to 1878 609 to 5     Submitted on the opposite strand 605/609
(99 %)
0 diff
(100 %id)
BG874528 breast_normal .a 1284 to 1811 19 to 545       527/545
(96 %)
8 diff
(98.6 %id)
BG676089 skin, squamous cell carcinoma .a 1296 to 1994 1 to 701       701/701
(100 %)
2 diff
(99.8 %id)
BG682141 skin, squamous cell carcinoma .a 1296 to 2018 1 to 724       724/867
(83 %)
10 diff
(98.9 %id)
BG678630 skin, squamous cell carcinoma .a 1297 to 2161 1 to 867       867/867
(100 %)
21 diff
(97.6 %id)
BG682651 skin, squamous cell carcinoma .a 1300 to 2108 11 to 818       808/818
(98 %)
14 diff
(98.3 %id)
CV375082 bladder_tumor .a 1303 to 1938 1 to 628       628/629
(99 %)
34 diff
(94.6 %id)
BG679927 skin, squamous cell carcinoma .a 1303 to 2098 1 to 796       796/797
(99 %)
1 diff
(99.9 %id)
BQ356453 head_neck .a 1305 to 1921 625 to 17       609/662
(91 %)
8 diff
(98.8 %id)
BG676521 skin, squamous cell carcinoma .a 1307 to 2305 1 to 1007       1007/1060
(95 %)
33 diff
(96.9 %id)
CV379506 bladder_tumor .a 1311 to 1668 358 to 1     Submitted on the opposite strand 358/358
(100 %)
3 diff
(99.2 %id)
BG677710 skin, squamous cell carcinoma .a 1327 to 2215 1 to 891       891/891
(100 %)
7 diff
(99.3 %id)
BG678488 skin, squamous cell carcinoma .a 1380 to 2220 1 to 843       843/843
(100 %)
6 diff
(99.3 %id)
BG697772 skin .a 1390 to 2154 1 to 765       765/765
(100 %)
4 diff
(99.5 %id)
BE181572.
matches multiple genes
head_neck .a 1397 to 1490 9 to 101     also hits gene KRT6AandKRT6C 93/101
(92 %)
10 diff
(90.1 %id)
BQ299883 bladder_tumor .a 1404 to 1682 277 to 1       277/278
(99 %)
4 diff
(98.6 %id)
BG681990 skin, squamous cell carcinoma .a 1404 to 2293 1 to 892       892/893
(99 %)
7 diff
(99.3 %id)
BG676451 skin, squamous cell carcinoma .a 1418 to 2284 1 to 872       872/974
(89 %)
6 diff
(99.4 %id)
CV349253 head_neck .a 1419 to 2016 1 to 596       596/596
(100 %)
22 diff
(96.4 %id)
CV369708.
matches multiple genes
bladder_tumor .a 1423 to 1721 290 to 4     Submitted on the opposite strand, also hits gene KRT6AandKRT6C 287/292
(98 %)
8 diff
(97.3 %id)
TI_159716106   .a 1428 to 2383 1047 to 95   AAA   953/1057
(90 %)
14 diff
(98.7 %id)
AW381696 head_neck .a 1433 to 2003 11 to 582       572/591
(96 %)
14 diff
(97.7 %id)
BF843056 head_neck .a 1456 to 1926 19 to 489       471/490
(96 %)
10 diff
(98.0 %id)
BG988392 head_neck .a 1475 to 1691 1 to 225       225/229
(98 %)
26 diff
(88.7 %id)
BG988409 head_neck .a 1494 to 1655 1 to 161       161/161
(100 %)
5 diff
(96.9 %id)
BG952693 colon .a 1517 to 1695 18 to 196       179/196
(91 %)
7 diff
(96.5 %id)
BG952694.
matches multiple genes
colon .a 1517 to 1644 1 to 127     also hits gene KRT6AandKRT6C 127/127
(100 %)
10 diff
(92.2 %id)
BM018764 astrocytoma grade IV, cell line, brain .a 1523 to 2332 1 to 811   tiling clone,   811/811
(100 %)
2 diff
(99.8 %id)
TI_59389433   .a 1524 to 2332 92 to 901       810/810
(100 %)
1 diff
(99.9 %id)
BM909985 astrocytoma grade IV, cell line, brain .a 1525 to 2287 1 to 769       769/1035
(74 %)
28 diff
(97.3 %id)
AW361132 colon .a 1547 to 2046 1 to 502       502/502
(100 %)
11 diff
(97.9 %id)
AW998022 breast_normal .a 1573 to 1808 1 to 237       237/237
(100 %)
5 diff
(97.9 %id)
BG945750 bladder_tumor .a 1573 to 1735 4 to 166       163/166
(98 %)
8 diff
(95.2 %id)
BF836204 head_neck .a 1584 to 1910 1 to 334       342/334
(102 %)
14 diff
(95.9 %id)
AW994261 breast_normal .a 1603 to 2208 609 to 5     Submitted on the opposite strand 605/628
(96 %)
0 diff
(100 %id)
BF738448.
matches multiple genes
bladder_tumor .a 1603 to 1732 25 to 157   tiling clone, also hits gene KRT6AandKRT6C 133/157
(84 %)
7 diff
(95.6 %id)
BE716613.
matches multiple genes
head_neck .a 1605 to 1924 349 to 24   tiling clone, also hits gene KRT6AandKRT6C 326/365
(89 %)
0 diff
(100 %id)
BG741760 skin .a 1628 to 2281 1 to 656       656/659
(99 %)
3 diff
(99.6 %id)
BF837713 head_neck .a 1629 to 1915 294 to 8     Submitted on the opposite strand 287/294
(97 %)
0 diff
(100 %id)
BF736544 bladder_tumor .a 1656 to 2186 535 to 6     Submitted on the opposite strand 530/535
(99 %)
0 diff
(100 %id)
AA586890 larynx .a 1657 to 1999 1 to 343     Submitted on the opposite strand 343/343
(100 %)
0 diff
(100 %id)
CK816151 breast, cancer cells growing in a xenograft mousemodel .a 1673 to 2383 15 to 724   AAA   710/724
(98 %)
8 diff
(98.9 %id)
AW994181 breast_normal .a 1675 to 2299 626 to 4     Submitted on the opposite strand 623/628
(99 %)
0 diff
(100 %id)
BG987560 head_neck .a 1709 to 2063 12 to 366       355/366
(96 %)
6 diff
(98.4 %id)
AI608611 normal gingiva (cell line from primarykeratinocytes) .a 1716 to 1998 281 to 1       281/281
(100 %)
7 diff
(97.6 %id)
BG986320 head_neck .a 1717 to 1960 1 to 243       243/244
(99 %)
5 diff
(98.0 %id)
BF835792 head_neck .a 1733 to 1890 1 to 154       154/154
(100 %)
7 diff
(95.5 %id)
AI609259 normal gingiva (cell line from primarykeratinocytes) .a 1738 to 1998 260 to 1       260/260
(100 %)
4 diff
(98.5 %id)
AW369119 head_neck .a 1758 to 2348 594 to 4       591/595
(99 %)
0 diff
(100 %id)
BG987554 head_neck .a 1759 to 2122 371 to 7       365/371
(98 %)
0 diff
(100 %id)
BE183185 head_neck .a 1783 to 2141 1 to 359       359/359
(100 %)
6 diff
(98.4 %id)
BF843069 head_neck .a 1783 to 2062 25 to 304       280/304
(92 %)
6 diff
(98.1 %id)
AI829113 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .a 1792 to 2382 589 to 1       589/589
(100 %)
5 diff
(99.2 %id)
AU147677 mammary gland .a 1799 to 2383 586 to 1       586/586
(100 %)
15 diff
(97.5 %id)
AI831452 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .a 1800 to 2385 586 to 1   tiling clone,   586/597
(98 %)
4 diff
(99.4 %id)
AU147924 mammary gland .a 1815 to 2383 566 to 1       566/566
(100 %)
20 diff
(96.5 %id)
CB250438 Human Lung Epithelial cells, lung .a 1834 to 2383 568 to 19   AAA   550/550
(100 %)
0 diff
(100 %id)
AW379509 head_neck .a 1855 to 2269 1 to 416       416/418
(99 %)
12 diff
(97.2 %id)
W93639 heart .a 1869 to 2383 522 to 1       522/522
(100 %)
13 diff
(97.6 %id)
BF868946 lung_tumor .a 1892 to 2296 404 to 1     Submitted on the opposite strand 404/404
(100 %)
2 diff
(99.6 %id)
BG991287 head_neck .a 1898 to 2101 204 to 1       204/205
(99 %)
1 diff
(99.6 %id)
AW293448   .a 1902 to 2383 499 to 18   AAA   482/482
(100 %)
0 diff
(100 %id)
BF827613 head_normal .a 1948 to 2367 427 to 7     Submitted on the opposite strand 421/429
(98 %)
0 diff
(100 %id)
BE185602 head_neck .a 1981 to 2303 328 to 6     Submitted on the opposite strand 323/328
(98 %)
0 diff
(100 %id)
BF842515 head_neck .a 1997 to 2201 1 to 205       205/205
(100 %)
0 diff
(100 %id)
BF836810 head_neck .a 2009 to 2160 153 to 2     Submitted on the opposite strand 152/153
(99 %)
0 diff
(100 %id)
AA861951 squamous cell carcinoma from base of tongue, tongue .a 2010 to 2385 377 to 2       376/377
(99 %)
0 diff
(100 %id)
AA583760 larynx .a 2012 to 2355 344 to 1       344/344
(100 %)
0 diff
(100 %id)
AA583810 larynx .a 2012 to 2385 376 to 3       374/376
(99 %)
0 diff
(100 %id)
AA583913 larynx .a 2012 to 2354 343 to 1       343/343
(100 %)
0 diff
(100 %id)
AA586925 larynx .a 2012 to 2385 374 to 1       374/374
(100 %)
0 diff
(100 %id)
AW243951 well-differentiated invasive carcinoma,floor of mouth .a 2013 to 2349 1 to 337     Submitted on the opposite strand 337/337
(100 %)
0 diff
(100 %id)
AW998870 breast_normal .a 2015 to 2195 1 to 181       181/181
(100 %)
5 diff
(97.3 %id)
AA583818 larynx .a 2015 to 2354 340 to 1       340/340
(100 %)
0 diff
(100 %id)
BF354245 head_neck .a 2021 to 2308 1 to 288       288/288
(100 %)
1 diff
(99.7 %id)
BF350150 head_neck .a 2044 to 2208 20 to 184       165/194
(85 %)
6 diff
(97.0 %id)
AW238225 carcinoma in situ from retromolar trigone .a 2068 to 2383 339 to 24   AAA   316/316
(100 %)
3 diff
(99.1 %id)
AA584013 larynx .a 2073 to 2383 344 to 34   AAA   311/311
(100 %)
0 diff
(100 %id)
BG696718 skin .a 2088 to 2383 1 to 296   AAA   296/296
(100 %)
0 diff
(100 %id)
BX095511 heart .a 2093 to 2383 1 to 291   AAA   291/291
(100 %)
0 diff
(100 %id)
D29287   .a 2107 to 2383 1 to 277       277/277
(100 %)
0 diff
(100 %id)
AW238576 carcinoma in situ from retromolar trigone .a 2107 to 2393 293 to 7       287/296
(96 %)
10 diff
(96.7 %id)
AA026418 heart .a 2124 to 2383 278 to 19   AAA   260/260
(100 %)
0 diff
(100 %id)
AW946461 lung_tumor .a 2174 to 2290 117 to 1     Submitted on the opposite strand 117/117
(100 %)
0 diff
(100 %id)
AW946469 lung_tumor .a 2174 to 2300 134 to 9     Submitted on the opposite strand 126/134
(94 %)
0 diff
(100 %id)
AW083719 esophagus, squamous cell carcinoma .a 2176 to 2383 228 to 21   AAA   208/208
(100 %)
4 diff
(98.1 %id)
AA584251 larynx .a 2177 to 2383 251 to 45   AAA   207/207
(100 %)
1 diff
(99.6 %id)
AA584033 larynx .a 2255 to 2383 162 to 34   AAA   129/129
(100 %)
0 diff
(100 %id)
CV414813 breast_normal .b 1 to 695 1 to 692 M2T L5W V6W E7R D8T ... tiling clone,   692/736
(94 %)
16 diff
(97.9 %id)
CV414792 breast_normal .b 2 to 699 1 to 691 M2Q L5W V6W E7R D8T ... tiling clone,   691/693
(99 %)
17 diff
(97.6 %id)
CV348600 head_normal .c 1 to 526 1 to 529 A8G K9Q A10G D11R T12H ... tiling clone,   529/529
(100 %)
15 diff
(97.2 %id)
BG997611 head_neck .c 418 to 921 543 to 42   tiling clone,   502/543
(92 %)
0 diff
(100 %id)
BG945766.
matches multiple genes
bladder_tumor .d 1 to 171 171 to 2   tiling clone, also hits gene KRT6AandKRT6C 170/171
(99 %)
3 diff
(98.3 %id)
BF737388 bladder_tumor .d 28 to 140 121 to 10     Submitted on the opposite strand 112/121
(92 %)
0 diff
(100 %id)
CB852334 Human Lung Epithelial cells, lung .d 28 to 824 815 to 19   tiling clone, AAA   797/797
(100 %)
3 diff
(99.7 %id)
AW994241 breast_normal .d 30 to 614 588 to 3     Submitted on the opposite strand 586/588
(99 %)
1 diff
(99.9 %id)
BF739064 bladder_tumor .d 30 to 287 1 to 258       258/258
(100 %)
5 diff
(98.1 %id)
BE004048 breast_normal .d 33 to 317 1 to 286       286/291
(98 %)
8 diff
(97.3 %id)
BE719864.
matches multiple genes
head_neck .d 35 to 180 147 to 1   tiling clone, also hits gene KRT6AandKRT6C 147/147
(100 %)
13 diff
(91.2 %id)
BG680996 skin, squamous cell carcinoma .d 44 to 775 1 to 734   tiling clone,   734/734
(100 %)
4 diff
(99.5 %id)
BI036961 nervous_tumor Gene KRT6B, variant not shown         Suspected internal deletion, this clone was ignored    
BI036971 nervous_tumor Gene KRT6B, variant not shown         Suspected internal deletion, this clone was ignored    
AK296729 tongue, tumor tissue Gene KRT6B, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI