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Gene KRT2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
77 supporting clones for gene KRT2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
EL594404 epidermis, skin .a 1 to 265 279 to 16   tiling clone, Submitted on the opposite strand 264/299
(88 %)
0 diff
(100 %id)
AL597752   .a 5 to 517 1 to 531       531/531
(100 %)
14 diff
(97.4 %id)
AL598597   .a 5 to 356 1 to 352       352/352
(100 %)
1 diff
(99.8 %id)
M99061 epidermis .a 42 to 2450 1 to 2427 S101G S109G G112S F113G G114F ...     2427/2427
(100 %)
13 diff
(99.5 %id)
NM_000423.2   .a 42 to 2454 1 to 2413 exact RefSeq, AAA   2413/2413
(100 %)
0 diff
(100 %id)
BC096294 PCR rescued clones .a 53 to 2225 1 to 2173 exact tiling clone,   2173/2173
(100 %)
0 diff
(100 %id)
BC099643 PCR rescued clones .a 53 to 2225 1 to 2173 exact     2173/2173
(100 %)
1 diff
(100.0 %id)
BC099644 PCR rescued clones .a 53 to 2225 1 to 2173 exact     2173/2173
(100 %)
1 diff
(100.0 %id)
CU448042 epidermis .a 217 to 874 677 to 20     Submitted on the opposite strand 658/677
(97 %)
2 diff
(99.8 %id)
CU453315 epidermis .a 232 to 361 142 to 13     Submitted on the opposite strand 130/148
(87 %)
9 diff
(94.0 %id)
CU456196 epidermis .a 273 to 614 356 to 15     Submitted on the opposite strand 342/375
(91 %)
0 diff
(100 %id)
CU448046 epidermis .a 274 to 577 21 to 324       304/338
(89 %)
6 diff
(98.3 %id)
CU448594 epidermis .a 453 to 1148 715 to 20     Submitted on the opposite strand 696/719
(96 %)
1 diff
(99.9 %id)
CU444592 epidermis .a 504 to 1148 667 to 24     Submitted on the opposite strand 644/677
(95 %)
7 diff
(99.0 %id)
CU455166 epidermis .a 551 to 860 23 to 332       310/351
(88 %)
9 diff
(97.5 %id)
CU442986 epidermis .a 706 to 1186 492 to 11     Submitted on the opposite strand 482/501
(96 %)
3 diff
(99.5 %id)
CU454472 epidermis .a 706 to 1186 492 to 11     Submitted on the opposite strand 482/501
(96 %)
3 diff
(99.5 %id)
CU450321 epidermis .a 775 to 1319 15 to 559       545/574
(94 %)
11 diff
(98.1 %id)
CU452087 epidermis .a 775 to 1146 390 to 19     Submitted on the opposite strand 372/404
(92 %)
1 diff
(99.8 %id)
EL595073 epidermis, skin .a 775 to 978 29 to 236       206/236
(87 %)
9 diff
(96.2 %id)
EL595077 epidermis, skin .a 775 to 1017 29 to 274       246/274
(89 %)
9 diff
(96.8 %id)
CU450865 epidermis .a 794 to 1521 742 to 15     Submitted on the opposite strand 728/742
(98 %)
0 diff
(100 %id)
CU456936 epidermis .a 796 to 1146 369 to 19     Submitted on the opposite strand 351/369
(95 %)
0 diff
(100 %id)
EL595115 epidermis, skin .a 813 to 1543 751 to 24     Submitted on the opposite strand 728/799
(91 %)
13 diff
(98.4 %id)
EL595111 epidermis, skin .a 877 to 1543 689 to 25     Submitted on the opposite strand 665/824
(80 %)
6 diff
(99.3 %id)
CU451804 epidermis .a 878 to 1298 24 to 444       421/444
(94 %)
16 diff
(96.4 %id)
EL594881 epidermis, skin .a 898 to 1167 23 to 292       270/315
(85 %)
7 diff
(97.8 %id)
CU444555 epidermis .a 951 to 1767 826 to 10     Submitted on the opposite strand 817/827
(98 %)
0 diff
(100 %id)
CU454808 epidermis .a 1000 to 1763 780 to 16     Submitted on the opposite strand 765/780
(98 %)
0 diff
(100 %id)
CU456062 epidermis .a 1019 to 1733 729 to 15     Submitted on the opposite strand 715/729
(98 %)
1 diff
(99.9 %id)
EL595080 epidermis, skin .a 1036 to 1290 287 to 32     Submitted on the opposite strand 256/287
(89 %)
2 diff
(99.4 %id)
EL595068 epidermis, skin .a 1049 to 1543 511 to 25     Submitted on the opposite strand 487/517
(94 %)
16 diff
(97.0 %id)
CU443272 epidermis .a 1060 to 1792 744 to 13     Submitted on the opposite strand 732/744
(98 %)
0 diff
(100 %id)
CU449894 epidermis .a 1076 to 1792 747 to 32     Submitted on the opposite strand 716/747
(95 %)
0 diff
(100 %id)
CU456421 epidermis .a 1086 to 1785 703 to 4     Submitted on the opposite strand 700/703
(99 %)
3 diff
(99.6 %id)
CU451344 epidermis .a 1099 to 1540 25 to 466       442/483
(91 %)
7 diff
(98.6 %id)
CU448813 epidermis .a 1112 to 1873 777 to 16     Submitted on the opposite strand 762/777
(98 %)
1 diff
(99.9 %id)
CU453953 epidermis .a 1150 to 1620 16 to 486       471/486
(96 %)
8 diff
(98.4 %id)
EL595048 epidermis, skin .a 1150 to 1543 419 to 25     Submitted on the opposite strand 395/419
(94 %)
0 diff
(100 %id)
CU446500 epidermis .a 1151 to 1771 17 to 637       621/643
(96 %)
8 diff
(98.8 %id)
CU455412 epidermis .a 1151 to 1771 17 to 637       621/649
(95 %)
9 diff
(98.7 %id)
CU455762 epidermis .a 1151 to 1762 17 to 628       612/628
(97 %)
7 diff
(98.9 %id)
CU453933 epidermis .a 1156 to 1521 381 to 15     Submitted on the opposite strand 367/394
(93 %)
1 diff
(99.8 %id)
CU444984 epidermis .a 1169 to 1755 605 to 19     Submitted on the opposite strand 587/625
(93 %)
0 diff
(100 %id)
CU449232 epidermis .a 1252 to 1822 576 to 6     Submitted on the opposite strand 571/582
(98 %)
13 diff
(97.8 %id)
CU444174 epidermis .a 1266 to 1492 226 to 1     Submitted on the opposite strand 226/226
(100 %)
3 diff
(98.7 %id)
CU449209 epidermis .a 1290 to 1540 20 to 270       251/317
(79 %)
7 diff
(97.8 %id)
CU443188 epidermis .a 1303 to 1540 21 to 258       238/290
(82 %)
7 diff
(97.6 %id)
CU453296 epidermis .a 1328 to 1782 471 to 16     Submitted on the opposite strand 456/525
(86 %)
2 diff
(99.7 %id)
CU448128 epidermis .a 1338 to 1673 347 to 11     Submitted on the opposite strand 337/347
(97 %)
4 diff
(98.9 %id)
CU455101 epidermis .a 1355 to 1822 473 to 6     Submitted on the opposite strand 468/493
(94 %)
6 diff
(98.8 %id)
CU455144 epidermis .a 1369 to 1768 408 to 10     Submitted on the opposite strand 399/413
(96 %)
6 diff
(98.6 %id)
CU443212 epidermis .a 1386 to 1795 437 to 27     Submitted on the opposite strand 411/441
(93 %)
2 diff
(99.6 %id)
CU443821 epidermis .a 1386 to 1795 436 to 26     Submitted on the opposite strand 411/440
(93 %)
2 diff
(99.6 %id)
CU445366 epidermis .a 1386 to 1795 437 to 27     Submitted on the opposite strand 411/441
(93 %)
2 diff
(99.6 %id)
CU446317 epidermis .a 1386 to 1795 429 to 19     Submitted on the opposite strand 411/433
(94 %)
3 diff
(99.4 %id)
CU448681 epidermis .a 1402 to 1768 375 to 10     Submitted on the opposite strand 366/388
(94 %)
3 diff
(99.3 %id)
EL595227 epidermis, skin .a 1403 to 1973 611 to 41     Submitted on the opposite strand 571/628
(90 %)
1 diff
(99.9 %id)
CU442783 epidermis .a 1407 to 1680 19 to 292       274/296
(92 %)
7 diff
(97.7 %id)
BG696395 skin .a 1408 to 1863 1 to 454       454/454
(100 %)
1 diff
(99.8 %id)
CU447607 epidermis .a 1416 to 2130 730 to 16     Submitted on the opposite strand 715/730
(97 %)
0 diff
(100 %id)
CU447818 epidermis .a 1450 to 2173 732 to 8     Submitted on the opposite strand 725/732
(99 %)
1 diff
(99.9 %id)
CU448040 epidermis .a 1484 to 2173 698 to 8     Submitted on the opposite strand 691/698
(98 %)
1 diff
(99.9 %id)
CU446358 epidermis .a 1531 to 1912 389 to 8     Submitted on the opposite strand 382/411
(92 %)
0 diff
(100 %id)
CU450356 epidermis .a 1535 to 1792 288 to 32     Submitted on the opposite strand 257/308
(83 %)
0 diff
(100 %id)
CU447568 epidermis .a 1541 to 1755 34 to 247       214/250
(85 %)
10 diff
(96.0 %id)
CU448904 epidermis .a 1755 to 2039 18 to 302       285/318
(89 %)
3 diff
(99.1 %id)
CU450704 epidermis .a 1803 to 2175 378 to 6     Submitted on the opposite strand 373/389
(95 %)
0 diff
(100 %id)
EL595238 epidermis, skin .a 1860 to 2328 500 to 25     Submitted on the opposite strand 476/512
(92 %)
0 diff
(100 %id)
EL595239 epidermis, skin .a 1860 to 2328 13 to 481       469/499
(93 %)
4 diff
(99.2 %id)
EL595245 epidermis, skin .a 1860 to 2292 14 to 446       433/471
(91 %)
3 diff
(99.4 %id)
AL598277   .a 2079 to 2454 1 to 376   tiling clone, AAA   376/376
(100 %)
0 diff
(100 %id)
CU455193 epidermis .a 2203 to 2428 234 to 9     Submitted on the opposite strand 226/234
(96 %)
0 diff
(100 %id)
DA383601 thalamus .b 1 to 621 2 to 622 Q35L tiling clone, capped   621/621
(100 %)
1 diff
(99.9 %id)
T28963 blood, white blood cells .c 1 to 390 1 to 391 S69* tiling clone,   391/391
(100 %)
6 diff
(98.5 %id)
AA354434   .d 1 to 270 1 to 271 S70F G71W G72R R73P Q74T ... tiling clone,   271/271
(100 %)
2 diff
(99.3 %id)
CU447252 epidermis Gene KRT2, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI