To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene KPTNTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
152 supporting clones for gene KPTN back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AA789331   .a 1 to 307 1 to 304   tiling clone, Submitted on the opposite strand 304/304
(100 %)
10 diff
(96.8 %id)
AI025891   .a 1 to 305 1 to 302   tiling clone, Submitted on the opposite strand 302/302
(100 %)
13 diff
(95.7 %id)
AW086422 ovary, papillary serous carcinoma .a 6 to 301 16 to 311   tiling clone, Submitted on the opposite strand 296/311
(95 %)
6 diff
(98.1 %id)
BP333238 salivary gland .a 240 to 747 1 to 508       508/565
(89 %)
6 diff
(99.0 %id)
DA824599 pericardium .a 247 to 769 2 to 524   capped   523/523
(100 %)
0 diff
(100 %id)
NM_007059.2   .a 250 to 1937 1 to 1688 exact RefSeq,   1688/1688
(100 %)
0 diff
(100 %id)
DA129265 alzheimer cortex .a 251 to 704 2 to 455   capped   454/454
(100 %)
0 diff
(100 %id)
DA382001 thalamus .a 252 to 812 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DB116245 thymus .a 252 to 792 2 to 543   capped   542/542
(100 %)
1 diff
(99.9 %id)
BI828360 brain, medulla .a 269 to 1061 1 to 813       811/830
(97 %)
36 diff
(95.7 %id)
BI752560 brain .a 269 to 951 1 to 698       696/753
(92 %)
29 diff
(96.2 %id)
TI_57214945   .a 269 to 951 35 to 732       696/787
(88 %)
21 diff
(97.4 %id)
TI_57175127   .a 269 to 1061 61 to 873       811/890
(91 %)
42 diff
(95.3 %id)
DA000137   .a 284 to 993 2 to 715   capped   712/717
(99 %)
9 diff
(98.8 %id)
DA081233 cerebellum .a 284 to 747 2 to 466   capped   465/466
(99 %)
1 diff
(99.8 %id)
AL514262 neuroblastoma, placenta .a 284 to 1342 1 to 1048       1048/1052
(99 %)
14 diff
(98.7 %id)
DB251193 uterus .a 284 to 802 2 to 522   capped   521/521
(100 %)
1 diff
(99.9 %id)
DA431669 colon .a 287 to 747 2 to 463   capped   462/463
(99 %)
2 diff
(99.6 %id)
DB055738 testis .a 287 to 832 2 to 557   capped   556/556
(100 %)
11 diff
(98.1 %id)
DA073192 cerebellum .a 288 to 846 2 to 561   capped   560/560
(100 %)
2 diff
(99.7 %id)
AK023996   .a 295 to 1936 1 to 1642 exact available from FLJ,   1642/1642
(100 %)
5 diff
(99.7 %id)
BY799938 eye .a 295 to 917 1 to 623       623/623
(100 %)
1 diff
(99.9 %id)
BQ960142 leiomyosarcoma, uterus .a 295 to 1151 1 to 866       866/947
(91 %)
25 diff
(97.4 %id)
DA015544 adrenal gland .a 296 to 812 2 to 518   capped   517/517
(100 %)
0 diff
(100 %id)
DA077029 cerebellum .a 296 to 878 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
DA142244 alzheimer cortex .a 296 to 835 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DA606744   .a 296 to 918 2 to 624   capped   623/623
(100 %)
0 diff
(100 %id)
DB111140 thymus .a 296 to 862 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
AU142730   .a 296 to 1014 2 to 719   capped   718/720
(99 %)
6 diff
(99.2 %id)
CR590339 Neuroblastoma Cot 25-normalized .a 298 to 1875 1 to 1578 exact tiling clone,   1578/1578
(100 %)
0 diff
(100 %id)
AL526946 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 298 to 1171 1 to 873   fully sequenced,   873/873
(100 %)
0 diff
(100 %id)
BI333635 cervical carcinoma cell line, cervix .a 299 to 1139 1 to 845       843/851
(99 %)
12 diff
(98.6 %id)
BP267823 thyroid .a 300 to 852 1 to 553       553/553
(100 %)
2 diff
(99.7 %id)
BP303666   .a 304 to 884 1 to 581       581/581
(100 %)
0 diff
(100 %id)
DN995400 breast cancer, Mammary gland (cancer tissue) .a 305 to 1002 1 to 698       698/698
(100 %)
5 diff
(99.3 %id)
AK225419 Kidney .a 306 to 1929 1 to 1624 C337R AAA   1624/1624
(100 %)
2 diff
(99.9 %id)
AU099310   .a 306 to 606 1 to 300       300/300
(100 %)
1 diff
(99.7 %id)
BP255158 Kidney .a 306 to 894 1 to 588       588/588
(100 %)
2 diff
(99.7 %id)
DA089290 cerebellum .a 307 to 871 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA375282 thalamus .a 307 to 852 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
DA564473 heart .a 307 to 858 2 to 555   capped   554/554
(100 %)
2 diff
(99.7 %id)
CR618331 neuroblastoma .a 308 to 1912 1 to 1605 exact     1605/1605
(100 %)
0 diff
(100 %id)
AL517962 brain, neuroblastoma, neuroblastoma cells .a 308 to 1171 1 to 862   fully sequenced,   862/862
(100 %)
7 diff
(99.2 %id)
BM804980 ovary (pool of 3) .a 308 to 1056 24 to 775       752/1115
(67 %)
20 diff
(98.3 %id)
BP268245 thyroid .a 308 to 889 1 to 581       581/581
(100 %)
2 diff
(99.7 %id)
CN354465 embryonic stem cells, DMSO-treated H9 cellline .a 309 to 892 1 to 584       584/584
(100 %)
1 diff
(99.9 %id)
BI088796 cervix .a 309 to 1062 1 to 759       759/764
(99 %)
28 diff
(96.4 %id)
CR619560 Neuroblastoma Cot 25-normalized .a 310 to 1905 1 to 1596 exact     1596/1596
(100 %)
0 diff
(100 %id)
AL526986 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 310 to 1171 1 to 861   fully sequenced,   861/861
(100 %)
4 diff
(99.6 %id)
BP267365 thyroid .a 310 to 888 1 to 578       578/578
(100 %)
1 diff
(99.9 %id)
AF105369   .a 315 to 1929 1 to 1614 A8P A9R P11L C12S P13L ...     1614/1641
(98 %)
17 diff
(99.0 %id)
BQ953596 sciatic nerve .a 315 to 1175 1 to 869       869/1031
(84 %)
21 diff
(98.0 %id)
BI772740 pooled lung and spleen .a 317 to 1137 1 to 817       817/845
(96 %)
10 diff
(98.9 %id)
TI_57178165   .a 317 to 1137 1 to 817   AAA   817/833
(98 %)
10 diff
(98.8 %id)
BM924635 pooled colon, kidney, stomach .a 318 to 1220 19 to 921       903/1114
(81 %)
16 diff
(98.6 %id)
BG394309 eye, retinoblastoma .a 320 to 1070 1 to 798       560/1158
(48 %)
54 diff
(95.4 %id)
BM547760 brain, hippocampus .a 321 to 1055 1 to 740       740/1168
(63 %)
16 diff
(98.7 %id)
BI093681 cervix .a 322 to 952 9 to 664       653/1077
(60 %)
36 diff
(96.7 %id)
BI767451 pooled lung and spleen .a 330 to 1140 1 to 812       812/817
(99 %)
14 diff
(98.3 %id)
TI_57181161   .a 330 to 1140 63 to 874       812/879
(92 %)
20 diff
(97.8 %id)
CX165107 human embryonic stem cells differentiated toan early endodermal cell type .a 332 to 1132 1 to 801       801/801
(100 %)
0 diff
(100 %id)
DB463068 hippocampus .a 333 to 998 1 to 666       666/666
(100 %)
3 diff
(99.6 %id)
BC009249 Muscle, rhabdomyosarcoma .a 335 to 1929 1 to 1595 exact available from MGC, AAA   1595/1595
(100 %)
1 diff
(100.0 %id)
DA542031 lung .a 338 to 910 2 to 578   capped   577/577
(100 %)
5 diff
(99.2 %id)
BG253326 adenocarcinoma, cell line, Liver .a 339 to 1062 1 to 723       721/1108
(65 %)
16 diff
(98.6 %id)
DR007108 Spleen .a 339 to 1019 8 to 689       682/689
(98 %)
8 diff
(98.9 %id)
DA002699   .a 340 to 902 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA076175 cerebellum .a 340 to 868 2 to 530   capped   529/529
(100 %)
0 diff
(100 %id)
DA775003 brain .a 344 to 924 2 to 583   capped   582/582
(100 %)
2 diff
(99.7 %id)
BE298575 muscle, rhabdomyosarcoma .a 352 to 953 1 to 619       619/829
(74 %)
24 diff
(97.2 %id)
BF972364 leiomyosarcoma cell line, uterus .a 360 to 1140 1 to 783       783/1068
(73 %)
17 diff
(98.5 %id)
BG749006 eye, normal pigmented retinal epithelium .a 375 to 930 1 to 556       556/556
(100 %)
0 diff
(100 %id)
CN354463 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 548 to 1226 1 to 681       681/681
(100 %)
2 diff
(99.8 %id)
AI205231 brain, meningioma .a 564 to 857 1 to 294     Submitted on the opposite strand 294/294
(100 %)
12 diff
(96.0 %id)
BM759147 lymph node, stomach .a 577 to 825 1 to 249       249/249
(100 %)
1 diff
(99.6 %id)
BM764293 lymph node, stomach .a 577 to 1199 1 to 623       623/623
(100 %)
0 diff
(100 %id)
BM761137 lymph node, stomach .a 577 to 1240 1 to 664       664/664
(100 %)
0 diff
(100 %id)
BM760725 lymph node, stomach .a 577 to 1228 1 to 652       652/652
(100 %)
0 diff
(100 %id)
BM761752 lymph node, stomach .a 577 to 969 1 to 393       393/393
(100 %)
0 diff
(100 %id)
BM761636 lymph node, stomach .a 577 to 1107 1 to 531       531/531
(100 %)
0 diff
(100 %id)
BM844920 lymph node, stomach .a 577 to 894 1 to 318       318/318
(100 %)
0 diff
(100 %id)
T31890 colon, epididymis .a 600 to 844 1 to 245       245/245
(100 %)
1 diff
(99.6 %id)
BQ877328 melanotic melanoma, cell line, skin .a 626 to 1461 1 to 840       840/897
(93 %)
15 diff
(98.4 %id)
BX280638 embryonal carcinoma, cell line, testis .a 634 to 1123 1 to 490       490/490
(100 %)
0 diff
(100 %id)
BU156909 melanotic melanoma, cell line, skin .a 635 to 1459 1 to 834       834/920
(90 %)
25 diff
(97.3 %id)
BU838923 melanotic melanoma, cell line, skin .a 635 to 1296 1 to 660       660/910
(72 %)
27 diff
(97.1 %id)
BQ423458 embryonal carcinoma, cell line, testis .a 636 to 1487 1 to 859       859/880
(97 %)
15 diff
(98.3 %id)
BM728473 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 661 to 1304 1 to 643       643/643
(100 %)
2 diff
(99.7 %id)
BG684478 B-cells, primary B-cells from tonsils (cell line) .a 670 to 1420 1 to 749       749/749
(100 %)
6 diff
(99.2 %id)
R13180 whole brain .a 671 to 975 1 to 307       307/307
(100 %)
3 diff
(99.1 %id)
R21053 whole brain .a 671 to 1062 1 to 403       403/483
(83 %)
15 diff
(96.9 %id)
T08234   .a 673 to 1002 1 to 330       330/330
(100 %)
0 diff
(100 %id)
W85777 liver and spleen .a 674 to 1130 1 to 459       457/461
(99 %)
5 diff
(99.0 %id)
TI_1948154098   .a 803 to 1667 991 to 125       867/1357
(63 %)
15 diff
(98.9 %id)
BE383164 brain, neuroblastoma .a 818 to 1519 1 to 701       701/728
(96 %)
6 diff
(99.2 %id)
CN354464 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 851 to 1566 13 to 729       717/729
(98 %)
8 diff
(99.0 %id)
AA095563   .a 875 to 1115 1 to 239       239/243
(98 %)
15 diff
(93.9 %id)
TI_1948154361   .a 877 to 1667 917 to 125       793/1352
(58 %)
10 diff
(99.3 %id)
BI193217 epithelioid carcinoma cell line, Pancreas .a 886 to 1612 1 to 731       731/731
(100 %)
11 diff
(98.5 %id)
BG259593 embryonal carcinoma, cell line, testis .a 922 to 1564 1 to 643       643/643
(100 %)
1 diff
(99.9 %id)
BI117040 lung, small cell carcinoma .a 934 to 1626 1 to 693       693/693
(100 %)
2 diff
(99.8 %id)
TI_1948154186   .a 940 to 1667 850 to 124       727/1368
(53 %)
11 diff
(99.2 %id)
BE745410 adenocarcinoma cell line, ovary .a 1036 to 1807 1 to 776       776/799
(97 %)
8 diff
(99.0 %id)
BF851571 lung_normal .a 1060 to 1445 1 to 388       388/389
(99 %)
29 diff
(92.6 %id)
BF850538 lung_normal .a 1065 to 1450 31 to 418       388/418
(92 %)
10 diff
(97.7 %id)
BF850577 lung_normal .a 1098 to 1450 29 to 391       363/450
(80 %)
20 diff
(95.6 %id)
AL517961 brain, neuroblastoma, neuroblastoma cells .a 1110 to 1912 802 to 1   fully sequenced,   802/802
(100 %)
10 diff
(98.8 %id)
AL562786 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 1110 to 1902 795 to 4   fully sequenced,   792/795
(99 %)
1 diff
(99.9 %id)
AL562778 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 1110 to 1871 766 to 5   fully sequenced,   762/766
(99 %)
4 diff
(99.5 %id)
TI_227713495   .a 1131 to 1939 912 to 110   AAA   803/952
(84 %)
17 diff
(98.3 %id)
TI_149292100   .a 1139 to 1929 862 to 77   AAA   786/925
(84 %)
8 diff
(99.2 %id)
AA339326 brain .a 1227 to 1478 1 to 251       251/251
(100 %)
2 diff
(99.3 %id)
AW952798   .a 1227 to 1732 1 to 505       505/506
(99 %)
18 diff
(96.5 %id)
BM974313 lung .a 1239 to 1929 710 to 19   AAA   692/692
(100 %)
2 diff
(99.8 %id)
BU632572 cell lines, Chondrosarcoma .a 1241 to 1926 702 to 16   AAA   687/687
(100 %)
1 diff
(99.9 %id)
DB528815 hippocampus .a 1268 to 1927 1 to 660     Submitted on the opposite strand 660/662
(99 %)
2 diff
(99.7 %id)
CD364474 Alveolar Macrophage, lung .a 1324 to 1939 635 to 19   AAA   617/617
(100 %)
2 diff
(99.7 %id)
DB381816 thyroid gland .a 1353 to 1929 587 to 1       587/588
(99 %)
34 diff
(94.3 %id)
AA580512 colon, colon tumor .a 1399 to 1911 514 to 1       514/514
(100 %)
2 diff
(99.7 %id)
AU159970   .a 1415 to 1936 518 to 1       518/518
(100 %)
9 diff
(98.3 %id)
AI186086 lung .a 1435 to 1924 490 to 1       490/490
(100 %)
18 diff
(96.4 %id)
AV695498 hepatocellular carcinoma .a 1455 to 1866 1 to 407       407/409
(99 %)
5 diff
(98.8 %id)
BE502285 pooled germ cell tumors .a 1457 to 1930 479 to 6       474/479
(98 %)
0 diff
(100 %id)
DB294885   .a 1469 to 1929 462 to 1       460/469
(98 %)
10 diff
(97.9 %id)
AI005300 pooled .a 1481 to 1929 449 to 1       449/449
(100 %)
0 diff
(100 %id)
AI591027 ovary, tumor, 5 pooled (see description) .a 1483 to 1929 447 to 1       447/447
(100 %)
0 diff
(100 %id)
BG388698 embryonal carcinoma, cell line, testis .a 1487 to 1939 1 to 453   tiling clone, AAA   453/453
(100 %)
0 diff
(100 %id)
W85778 liver and spleen .a 1495 to 1929 439 to 1       439/441
(99 %)
4 diff
(99.1 %id)
AA580276 colon, colon tumor .a 1523 to 1928 406 to 1       406/406
(100 %)
0 diff
(100 %id)
AI867805 pooled germ cell tumors .a 1533 to 1930 400 to 3       398/400
(99 %)
0 diff
(100 %id)
H08141 whole brain .a 1537 to 1930 408 to 8       401/453
(88 %)
0 diff
(100 %id)
AI637754 pooled germ cell tumors .a 1545 to 1930 386 to 1       386/386
(100 %)
0 diff
(100 %id)
AI310697 2 pooled tumors (clear cell type), Kidney .a 1561 to 1929 386 to 19   AAA   368/368
(100 %)
5 diff
(98.7 %id)
CD251799 brain, Pituitary .a 1576 to 1929 1 to 354   AAA   354/354
(100 %)
0 diff
(100 %id)
AA861996 squamous cell carcinoma from base of tongue, tongue .a 1580 to 1911 332 to 1       332/332
(100 %)
0 diff
(100 %id)
BF929317 nervous_tumor .a 1602 to 1856 1 to 255       255/255
(100 %)
4 diff
(98.5 %id)
AA938554 2 pooled tumors (clear cell type), Kidney .a 1608 to 1930 325 to 3       323/325
(99 %)
0 diff
(100 %id)
AA838307 colon, colon tumor .a 1610 to 1929 320 to 1       320/320
(100 %)
0 diff
(100 %id)
AW015625   .a 1623 to 1929 324 to 18   AAA   307/307
(100 %)
0 diff
(100 %id)
T17326   .a 1637 to 1926 290 to 1       290/290
(100 %)
0 diff
(100 %id)
AI380182 B-cell, chronic lymphotic leukemia .a 1727 to 1929 216 to 14   AAA   203/203
(100 %)
0 diff
(100 %id)
AW079333 esophagus, squamous cell carcinoma .a 1763 to 1935 173 to 1       173/173
(100 %)
0 diff
(100 %id)
Z45636 brain, total brain .b 1 to 246 1 to 247   tiling clone,   247/247
(100 %)
1 diff
(99.6 %id)
H28816 whole brain .b 25 to 389 1 to 371   tiling clone,   371/378
(98 %)
14 diff
(96.3 %id)
H28796 whole brain .b 1054 to 1443 421 to 21   tiling clone, AAA   401/401
(100 %)
18 diff
(95.6 %id)
Z41308 brain, total brain .b 1270 to 1440 171 to 1       171/171
(100 %)
0 diff
(100 %id)
TI_45211898   .c 1 to 888 82 to 968 V2R S202K R203S E204R V205G ...     890/1045
(85 %)
37 diff
(96.5 %id)
BI600417 brain, hypothalamus .c 3 to 888 1 to 884   tiling clone,   887/961
(92 %)
36 diff
(96.3 %id)
BG117342 adenocarcinoma, cell line, Liver .d 1 to 701 1 to 698   tiling clone,   700/808
(86 %)
13 diff
(98.4 %id)
DR759729 embryonic stem .d 10 to 815 1 to 806 exact tiling clone,   806/806
(100 %)
0 diff
(100 %id)
DB167776 kidney, tumor tissue .e 1 to 587 2 to 588 E51G tiling clone, capped   587/587
(100 %)
1 diff
(99.9 %id)
BM805866 brain, hippocampus .f 1 to 736 5 to 750 S172N tiling clone,   746/1124
(66 %)
43 diff
(96.2 %id)
CV573024 cornea, eye .f 204 to 773 1 to 570   tiling clone,   570/570
(100 %)
0 diff
(100 %id)
AK298672   .g 1 to 1623 1 to 1623 exact tiling clone,   1623/1623
(100 %)
1 diff
(100.0 %id)
DA671911   .g 2 to 600 2 to 600   capped   599/599
(100 %)
0 diff
(100 %id)
BM752332 Ascites, stomach .h 1 to 148 1 to 149 P30T F31V Q32P L33A C34V ... tiling clone,   149/149
(100 %)
3 diff
(98.0 %id)
DA347608 substantia nigra .i-u 1 to 569 2 to 570   tiling clone, capped   569/569
(100 %)
2 diff
(99.7 %id)
CB125897 Liver .i-u 101 to 627 1 to 527 R68T tiling clone,   527/527
(100 %)
1 diff
(99.9 %id)
BM687042 eye, optic nerve Gene KPTN, variant not shown         This clone was ignored    
AI858469 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors Gene KPTN, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI