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Gene KNDC1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
122 supporting clones for gene KNDC1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_152643.6   KNDC1.a 1 to 6773 1 to 6773 exact RefSeq,   6773/6773
(100 %)
0 diff
(100 %id)
AI093845 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus KNDC1.a 37 to 423 1 to 381   tiling clone, Submitted on the opposite strand 381/383
(99 %)
9 diff
(97.7 %id)
R87249 brain KNDC1.a 51 to 362 1 to 311     Submitted on the opposite strand 311/322
(96 %)
4 diff
(98.8 %id)
AB000781 cerebral cortex KNDC1.a 105 to 5292 1 to 5188   tiling clone,   5188/5188
(100 %)
20 diff
(99.7 %id)
BY795658 eye KNDC1.a 473 to 1066 1 to 594       594/594
(100 %)
2 diff
(99.7 %id)
BX099015 brain KNDC1.a 667 to 1320 665 to 13     Submitted on the opposite strand 653/671
(97 %)
0 diff
(100 %id)
DA191046 amygdala KNDC1.a 795 to 1367 5 to 577   tiling clone, capped   573/576
(99 %)
7 diff
(98.8 %id)
R87276 brain KNDC1.a 1022 to 1234 211 to 1     Submitted on the opposite strand 211/211
(100 %)
10 diff
(95.3 %id)
BM546594 brain, hippocampus KNDC1.a 1217 to 1737 20 to 543       524/1250
(41 %)
17 diff
(98.7 %id)
BM547596 brain, hippocampus KNDC1.a 1339 to 2117 1 to 783       783/1129
(69 %)
9 diff
(99.3 %id)
DA099487 cerebellum KNDC1.a 1530 to 2089 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA333209 hippocampus KNDC1.a 1533 to 2105 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DA319993 hippocampus KNDC1.a 1534 to 1995 2 to 464   capped   463/463
(100 %)
1 diff
(99.8 %id)
DA248679 brain KNDC1.a 1536 to 2133 2 to 599   capped   598/598
(100 %)
1 diff
(99.9 %id)
DA798363 brain KNDC1.a 1538 to 2043 2 to 507   capped   506/506
(100 %)
0 diff
(100 %id)
DA211605 brain KNDC1.a 1620 to 2169 2 to 551   capped   550/550
(100 %)
3 diff
(99.5 %id)
DA400540 thalamus KNDC1.a 1812 to 2348 2 to 538   tiling clone, capped   537/537
(100 %)
0 diff
(100 %id)
BF515694   KNDC1.a 2207 to 2474 269 to 2   tiling clone,   268/269
(99 %)
0 diff
(100 %id)
DA227166 brain KNDC1.a 2264 to 2814 2 to 552   tiling clone, capped   551/551
(100 %)
2 diff
(99.7 %id)
M62125   KNDC1.a 2522 to 2738 1 to 217       217/217
(100 %)
2 diff
(99.1 %id)
CN255407 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 KNDC1.a 2557 to 3138 1 to 582   tiling clone,   582/582
(100 %)
4 diff
(99.4 %id)
DA237539 brain KNDC1.a 2647 to 3243 2 to 598   tiling clone, capped   597/601
(99 %)
2 diff
(99.7 %id)
BI523018 brain KNDC1.a 2990 to 3639 650 to 1       650/866
(75 %)
5 diff
(99.5 %id)
TI_44185226   KNDC1.a 2990 to 3648 737 to 80       658/953
(69 %)
5 diff
(99.5 %id)
DA399095 thalamus KNDC1.a 3015 to 3580 2 to 568   tiling clone, capped   567/567
(100 %)
1 diff
(99.9 %id)
DA236535 brain KNDC1.a 3161 to 3737 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
DA104241 cerebellum KNDC1.a 3237 to 3778 2 to 543   capped   542/542
(100 %)
1 diff
(99.9 %id)
DA112818 cerebellum KNDC1.a 3326 to 3858 2 to 534   capped   533/533
(100 %)
0 diff
(100 %id)
AK294170 amygdala KNDC1.a 3407 to 5397 1 to 1991   tiling clone,   1991/1991
(100 %)
0 diff
(100 %id)
DC313032 amygdala KNDC1.a 3407 to 3971 1 to 565       565/565
(100 %)
1 diff
(99.9 %id)
DA090407 cerebellum KNDC1.a 3451 to 4026 2 to 575   capped   574/574
(100 %)
3 diff
(99.5 %id)
BX954115   KNDC1.a 3478 to 4154 7 to 681       675/681
(99 %)
25 diff
(96.4 %id)
DA104762 cerebellum KNDC1.a 3523 to 4084 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA267350 caudate nucleus KNDC1.a 3525 to 4085 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA270867 caudate nucleus KNDC1.a 3575 to 3929 2 to 356   capped   355/355
(100 %)
0 diff
(100 %id)
DA186047 amygdala KNDC1.a 3607 to 4163 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
AI560775 anaplastic oligodendroglioma, brain KNDC1.a 3641 to 4142 1 to 502     Submitted on the opposite strand 502/502
(100 %)
2 diff
(99.7 %id)
AI566932 anaplastic oligodendroglioma, brain KNDC1.a 3641 to 4079 1 to 439     Submitted on the opposite strand 439/439
(100 %)
0 diff
(100 %id)
DA075744 cerebellum KNDC1.a 3679 to 4258 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DB175895 kidney, tumor tissue KNDC1.a 3700 to 4266 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
H41275 brain KNDC1.a 3706 to 4048 1 to 349     Submitted on the opposite strand 349/358
(97 %)
14 diff
(96.1 %id)
H41411 brain KNDC1.a 3706 to 4136 1 to 425     Submitted on the opposite strand 425/427
(99 %)
16 diff
(96.3 %id)
AI572526 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus KNDC1.a 3706 to 3959 1 to 254     Submitted on the opposite strand 254/254
(100 %)
2 diff
(99.3 %id)
AK131205 brain KNDC1.a 3720 to 6773 1 to 3054   tiling clone, available from FLJ,   3054/3054
(100 %)
1 diff
(100.0 %id)
DA514276 brain KNDC1.a 3721 to 4273 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
TI_44000883   KNDC1.a 3743 to 4198 80 to 535       456/537
(84 %)
7 diff
(98.7 %id)
BC047924 Brain, hippocampus KNDC1.a 3747 to 6773 1 to 3027   available from MGC, AAA   3027/3027
(100 %)
10 diff
(99.7 %id)
BI544928 brain, hippocampus KNDC1.a 3747 to 4198 1 to 452   available from MGC,   452/454
(99 %)
5 diff
(98.9 %id)
DB465235 hippocampus KNDC1.a 3752 to 4180 1 to 427       427/427
(100 %)
19 diff
(95.6 %id)
BX488661   KNDC1.a 3818 to 4350 1 to 534       534/534
(100 %)
3 diff
(99.5 %id)
R23389 whole brain KNDC1.a 3850 to 4234 1 to 390       390/396
(98 %)
22 diff
(94.5 %id)
BQ719533 sympathetic trunk KNDC1.a 3865 to 4672 1 to 809       809/961
(84 %)
17 diff
(98.3 %id)
DN989609 brain, whole brain KNDC1.a 4404 to 4735 7 to 338       332/338
(98 %)
0 diff
(100 %id)
DA524811 brain KNDC1.a 4575 to 5138 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
BM691964 eye, human retina KNDC1.a 4608 to 5127 9 to 528       520/528
(98 %)
0 diff
(100 %id)
DA170838 amygdala KNDC1.a 4612 to 5168 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
CB156302 brain KNDC1.a 4657 to 5209 1 to 553       553/553
(100 %)
0 diff
(100 %id)
DA176632 amygdala KNDC1.a 4671 to 5189 2 to 520   capped   519/519
(100 %)
0 diff
(100 %id)
TI_149311548   KNDC1.a 4679 to 5517 920 to 87   AAA   834/933
(89 %)
15 diff
(98.4 %id)
AK057756 cerebellum KNDC1.a 4704 to 6773 1 to 2069   available from FLJ,   2069/2069
(100 %)
4 diff
(99.9 %id)
BP209019 cerebellum KNDC1.a 4704 to 5286 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
H50252 brain KNDC1.a 4860 to 5258 14 to 412       399/419
(95 %)
22 diff
(94.8 %id)
TI_151742845   KNDC1.a 4923 to 5517 700 to 104   AAA   597/962
(62 %)
19 diff
(98.1 %id)
BU689478 lung, Primary Lung Cystic Fibrosis EpithelialCells KNDC1.a 4926 to 5517 610 to 19   AAA   592/592
(100 %)
0 diff
(100 %id)
DB108635 thymus KNDC1.a 4950 to 5526 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
N45097 multiple sclerosis lesions KNDC1.a 4988 to 5518 531 to 1       531/535
(99 %)
15 diff
(97.2 %id)
BX488662   KNDC1.a 5043 to 5522 501 to 22   AAA   480/480
(100 %)
1 diff
(99.8 %id)
AW207580   KNDC1.a 5066 to 5526 474 to 15   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 460/474
(97 %)
0 diff
(100 %id)
AI199680 anaplastic oligodendroglioma, brain KNDC1.a 5091 to 5525 435 to 1       435/435
(100 %)
0 diff
(100 %id)
AI656461 pooled germ cell tumors KNDC1.a 5101 to 5530 447 to 18   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 430/447
(96 %)
0 diff
(100 %id)
AI015830   KNDC1.a 5125 to 5526 402 to 1       402/402
(100 %)
0 diff
(100 %id)
BX110566 whole brain KNDC1.a 5154 to 5526 378 to 6   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 373/379
(98 %)
0 diff
(100 %id)
AI954840 pooled germ cell tumors KNDC1.a 5163 to 5517 355 to 1       355/355
(100 %)
0 diff
(100 %id)
BQ716708 sympathetic trunk KNDC1.a 5245 to 6035 1 to 798       798/951
(83 %)
20 diff
(97.9 %id)
R44173 whole brain KNDC1.a 5253 to 5517 290 to 25   AAA   266/266
(100 %)
2 diff
(99.3 %id)
CD243341 brain, Pituitary KNDC1.a 5356 to 5932 1 to 584       584/1048
(55 %)
15 diff
(98.6 %id)
R90789 brain KNDC1.a 5389 to 5751 1 to 362       362/367
(98 %)
3 diff
(99.2 %id)
BQ340640 nervous_normal KNDC1.a 5457 to 5791 1 to 330       330/330
(100 %)
11 diff
(96.7 %id)
BQ339914 nervous_normal KNDC1.a 5502 to 5713 1 to 212       212/212
(100 %)
14 diff
(93.4 %id)
H12048 whole brain KNDC1.a 5553 to 6063 1 to 524       524/528
(99 %)
39 diff
(92.7 %id)
H29073 whole brain KNDC1.a 5578 to 5846 1 to 269       269/278
(96 %)
3 diff
(99.0 %id)
BQ339916 nervous_normal KNDC1.a 5603 to 5755 1 to 153       153/153
(100 %)
1 diff
(99.4 %id)
BE093235 breast KNDC1.a 5730 to 5947 11 to 222       212/231
(91 %)
11 diff
(95.3 %id)
DB316686 brain KNDC1.a 6230 to 6773 544 to 1       544/544
(100 %)
0 diff
(100 %id)
DB343148 thymus KNDC1.a 6254 to 6774 522 to 1       522/522
(100 %)
2 diff
(99.7 %id)
DB531777 hippocampus KNDC1.a 6345 to 6773 1 to 426     Submitted on the opposite strand 426/426
(100 %)
9 diff
(97.9 %id)
H12049 whole brain KNDC1.a 6349 to 6771 437 to 8       430/496
(86 %)
0 diff
(100 %id)
BX282608 brain, hippocampus KNDC1.a 6350 to 6773 451 to 28   AAA Submitted on the opposite strand 424/424
(100 %)
0 diff
(100 %id)
H28970 whole brain KNDC1.a 6397 to 6771 387 to 8       380/389
(97 %)
0 diff
(100 %id)
AA723163 heart KNDC1.a 6469 to 6770 302 to 1       302/302
(100 %)
1 diff
(99.7 %id)
T16258   KNDC1.a 6570 to 6770 201 to 1       201/201
(100 %)
1 diff
(99.6 %id)
AB051555   KNDC1.b 1 to 3925 1 to 3925 exact tiling clone, available from KIAA,   3925/3925
(100 %)
1 diff
(100.0 %id)
AK090457 Spleen KNDC1.c 1 to 4632 1 to 4632 A31T W46R W825R tiling clone, available from FLJ,   4632/4632
(100 %)
5 diff
(99.9 %id)
DA388038 thalamus KNDC1.d 1 to 591 2 to 592 F133L T134P S135L M136W V137W ... tiling clone, capped   591/592
(99 %)
4 diff
(99.4 %id)
AL832201 cervix KNDC1.d 522 to 6637 1 to 6115   tiling clone, available from DKFZ, AAA   6115/6115
(100 %)
27 diff
(99.6 %id)
BF980535 duodenal adenocarcinoma, cell line, small intestine KNDC1.d 763 to 1496 1 to 726   tiling clone,   726/936
(77 %)
25 diff
(97.4 %id)
BF529060 anaplastic oligodendroglioma with 1p/19qloss, brain KNDC1.d 1749 to 2243 513 to 8     Submitted on the opposite strand 506/516
(98 %)
0 diff
(100 %id)
BX097618   KNDC1.d 2032 to 2487 1 to 456   tiling clone,   456/456
(100 %)
1 diff
(99.8 %id)
BQ188321 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid KNDC1.d 2222 to 2701 1 to 480   AAA   480/480
(100 %)
1 diff
(99.8 %id)
TI_151732160   KNDC1.d 2222 to 2701 557 to 78   AAA   480/916
(52 %)
1 diff
(99.9 %id)
AI224171 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus KNDC1.d 2228 to 2694 464 to 1       464/470
(98 %)
5 diff
(99.0 %id)
AI692620 carcinoid, lung KNDC1.d 2241 to 2700 460 to 1       460/460
(100 %)
1 diff
(99.8 %id)
AI694226 carcinoid, lung KNDC1.d 2242 to 2703 463 to 2       462/463
(99 %)
0 diff
(100 %id)
AW449871   KNDC1.d 2244 to 2701 475 to 18   AAA   458/458
(100 %)
2 diff
(99.6 %id)
AI963862 pooled germ cell tumors KNDC1.d 2263 to 2702 440 to 1       440/440
(100 %)
0 diff
(100 %id)
AI183649   KNDC1.d 2294 to 2703 410 to 2       409/410
(99 %)
0 diff
(100 %id)
AI217057 heart KNDC1.d 2430 to 2702 273 to 1       273/273
(100 %)
0 diff
(100 %id)
AA854407 parathyroid gland, parathyroid tumor KNDC1.d 2441 to 2701 272 to 12   AAA   261/261
(100 %)
1 diff
(99.7 %id)
DA218067 brain KNDC1.d 2765 to 3308 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
BI489799 pooled brain, lung, testis KNDC1.e 1 to 828 1 to 831 exact tiling clone,   831/834
(99 %)
10 diff
(98.9 %id)
TI_43960376   KNDC1.e 1 to 828 61 to 891 exact     831/894
(92 %)
16 diff
(98.3 %id)
BM701498 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid KNDC1.f-u 1 to 527 1 to 528 Q79P P80A L81S L82P G83R ... tiling clone,   528/528
(100 %)
2 diff
(99.7 %id)
BI824867 pooled brain, lung, testis KNDC1.g 1 to 643 1 to 643 exact tiling clone,   643/643
(100 %)
0 diff
(100 %id)
TI_57196968   KNDC1.g 1 to 643 70 to 712 exact     643/712
(90 %)
6 diff
(99.2 %id)
AI951527 fibrotheoma, ovary KNDC1.h 1 to 475 1 to 475 F21L V93G C94W tiling clone, Submitted on the opposite strand 475/475
(100 %)
5 diff
(99.0 %id)
AI146357 brain, glioblastoma (pooled) KNDC1.i 1 to 394 1 to 394 G37A tiling clone, Submitted on the opposite strand 394/394
(100 %)
1 diff
(99.8 %id)
BF799444 colon_ins KNDC1.i 290 to 639 45 to 394   tiling clone,   350/394
(88 %)
9 diff
(97.8 %id)
R13556 whole brain KNDC1.j-u 1 to 411 1 to 414   tiling clone,   414/418
(99 %)
3 diff
(99.3 %id)
F07772 brain, total brain KNDC1.j-u 16 to 200 1 to 187       187/187
(100 %)
2 diff
(99.0 %id)
AI680882 carcinoid, lung KNDC1.j-u 362 to 778 143 to 559   tiling clone, Submitted on the opposite strand 417/559
(74 %)
6 diff
(99.0 %id)
DB527645 testis KNDC1.j-u 767 to 1425 1 to 662   tiling clone, Submitted on the opposite strand 662/662
(100 %)
13 diff
(98.1 %id)
R39860 whole brain KNDC1.j-u 1007 to 1429 432 to 6 Y6X G13R P14X G15X V16C ... tiling clone,   427/432
(98 %)
0 diff
(100 %id)
Z40859 brain, total brain KNDC1.j-u 1158 to 1418 261 to 1       261/261
(100 %)
0 diff
(100 %id)
DA361286 subthalamic nucleus KNDC1.k 1 to 538 2 to 539 exact tiling clone, capped   538/538
(100 %)
0 diff
(100 %id)
BF732705 fibrotheoma, ovary KNDC1.l-u 1 to 506 508 to 1   tiling clone,   508/508
(100 %)
4 diff
(99.3 %id)
BF513407   KNDC1.l-u 116 to 505 390 to 1   tiling clone,   390/390
(100 %)
0 diff
(100 %id)
DB462208 testis Gene KNDC1, variant not shown         This clone was ignored    
AK074179 Spleen Gene KNDC1, variant not shown       available from FLJ, This clone was ignored    
DB302207 amygdala Gene KNDC1, variant not shown         Suspected internal deletion, this clone was ignored    
DA162243 amygdala Gene KNDC1, variant not shown       capped Suspected internal deletion, this clone was ignored    
AI193885 lung Gene KNDC1, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f-u, .g, .h, .i, .j-u, .k, .l-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC