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Gene KLRC1andKLRC2andKLRC3TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
117 supporting clones for gene KLRC1andKLRC2andKLRC3 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_007333.2   .a 1 to 843 1 to 843 exact RefSeq,   843/843
(100 %)
0 diff
(100 %id)
L14542   .b 1 to 1026 1 to 1025 S17N W34P T126A H128P C170S tiling clone, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 1025/1025
(100 %)
12 diff
(98.9 %id)
AF461157   .b 30 to 1024 1 to 995   tiling clone, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 995/995
(100 %)
17 diff
(98.3 %id)
DB488868 hypothalamus .b 124 to 571 1 to 447       447/447
(100 %)
12 diff
(97.4 %id)
AL038039 Kidney .b 380 to 723 1 to 353       353/473
(74 %)
17 diff
(96.5 %id)
W94964 liver and spleen .b 413 to 1028 1 to 625   fully sequenced,   623/623
(100 %)
30 diff
(95.2 %id)
FN160168 breast carcinoma .b 580 to 663 1 to 86       86/86
(100 %)
6 diff
(93.1 %id)
DB558228 hypothalamus .b 599 to 993 1 to 392     Submitted on the opposite strand 394/392
(100 %)
27 diff
(93.2 %id)
W93370 liver and spleen .b 623 to 1018 402 to 1   fully sequenced,   402/402
(100 %)
7 diff
(98.3 %id)
NM_002261.2   .c 1 to 1024 1 to 1024 exact RefSeq, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 1024/1024
(100 %)
0 diff
(100 %id)
AF350016   .c 46 to 768 1 to 723   tiling clone,   723/723
(100 %)
9 diff
(98.8 %id)
AF350017   .c 46 to 768 1 to 723       723/723
(100 %)
11 diff
(98.5 %id)
BC093644 Liver, PCR rescued clones .d 1 to 753 1 to 753 N12S T121A tiling clone,   753/753
(100 %)
5 diff
(99.4 %id)
TI_1242418776   .d 1 to 757 63 to 819 N12S T121A   Submitted on the opposite strand 757/1263
(59 %)
11 diff
(99.2 %id)
DW411677 Liver .d 20 to 330 18 to 328       311/328
(94 %)
6 diff
(98.2 %id)
DW455061 Liver .d 20 to 179 18 to 177       160/177
(90 %)
6 diff
(96.7 %id)
X54869   .d 25 to 1235 1 to 1211   tiling clone, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 1211/1211
(100 %)
9 diff
(99.3 %id)
Y13055 lymphoid .d 25 to 745 1 to 721       721/721
(100 %)
4 diff
(99.5 %id)
AW662984 2 pooled high-grade transitional celltumors, genitourinary tract .d 32 to 317 1 to 286       286/287
(99 %)
5 diff
(98.3 %id)
BX384039   .d 361 to 1205 845 to 1       845/886
(95 %)
23 diff
(97.5 %id)
BX330986   .d 362 to 1238 881 to 1   tiling clone,   881/881
(100 %)
27 diff
(97.0 %id)
BG218887   .d 402 to 1230 828 to 10     Submitted on the opposite strand 819/866
(94 %)
25 diff
(97.2 %id)
BG195895   .d 406 to 1228 826 to 15     Submitted on the opposite strand 812/873
(93 %)
10 diff
(98.9 %id)
BG195430   .d 415 to 1228 819 to 13     Submitted on the opposite strand 807/837
(96 %)
36 diff
(95.7 %id)
BG202603   .d 515 to 1229 714 to 11     Submitted on the opposite strand 704/854
(82 %)
14 diff
(98.4 %id)
BG215778   .d 516 to 1228 720 to 12     Submitted on the opposite strand 709/878
(80 %)
13 diff
(98.6 %id)
AI798774 pooled .d 616 to 1253 638 to 1       638/638
(100 %)
5 diff
(99.3 %id)
AI810168 pooled .d 616 to 1249 634 to 3       632/634
(99 %)
0 diff
(100 %id)
BG194798   .d 620 to 1230 614 to 10     Submitted on the opposite strand 605/855
(70 %)
0 diff
(100 %id)
BG057689 blood, lymphocyte .d 671 to 1233 563 to 1       563/563
(100 %)
3 diff
(99.5 %id)
BG183470   .d 856 to 1228 384 to 12     Submitted on the opposite strand 373/384
(97 %)
0 diff
(100 %id)
BI335443 cervical carcinoma cell line, cervix .d 898 to 1235 1 to 337   tiling clone, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 337/337
(100 %)
3 diff
(99.2 %id)
BG217874   .d 912 to 1228 330 to 14     Submitted on the opposite strand 317/330
(96 %)
0 diff
(100 %id)
BG184503   .d 1004 to 1230 273 to 47     Submitted on the opposite strand 227/273
(83 %)
0 diff
(100 %id)
NM_213658.2   .e 1 to 1600 1 to 1600 N29S RefSeq, AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 1600/1600
(100 %)
1 diff
(100.0 %id)
BC053840 Blood, natural killer cell .e 232 to 1600 1 to 1369 N29S tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 1369/1369
(100 %)
1 diff
(100.0 %id)
TI_1948225084   .e 389 to 1089 829 to 124       706/1371
(51 %)
15 diff
(99.0 %id)
TI_1948242256   .e 732 to 1089 967 to 606     Submitted on the opposite strand 362/1431
(25 %)
23 diff
(98.4 %id)
TI_1948225083   .e 752 to 1089 462 to 125       338/365
(92 %)
0 diff
(100 %id)
TI_1948241765   .e 763 to 1089 941 to 610     Submitted on the opposite strand 332/1451
(22 %)
21 diff
(98.6 %id)
AI363239 brain, glioblastoma (pooled) .e 899 to 1601 697 to 1       697/697
(100 %)
37 diff
(94.7 %id)
BU753864 placenta .e 1045 to 1613 569 to 6   tiling clone,   564/569
(99 %)
0 diff
(100 %id)
AA913480 pooled .e 1074 to 1601 523 to 1       523/523
(100 %)
4 diff
(99.3 %id)
BQ013319 placenta .e 1109 to 1600 503 to 17   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 487/487
(100 %)
4 diff
(99.2 %id)
TI_157613467   .e 1116 to 1600 563 to 84   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 480/480
(100 %)
6 diff
(98.8 %id)
AI656778 pooled germ cell tumors .e 1141 to 1600 458 to 1       458/458
(100 %)
6 diff
(98.7 %id)
DB530385 hippocampus .e 1201 to 1598 1 to 398     Submitted on the opposite strand 398/398
(100 %)
0 diff
(100 %id)
N68872 liver and spleen .e 1265 to 1395 131 to 1       131/131
(100 %)
1 diff
(99.3 %id)
NM_002259.4   .f 1 to 1426 1 to 1426 N29S RefSeq, AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 1426/1426
(100 %)
1 diff
(100.0 %id)
AF461812   .f 33 to 1426 9 to 1402 N29S tiling clone, AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 1394/1402
(99 %)
7 diff
(99.6 %id)
X54867   .f 51 to 1426 1 to 1376 N29S AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 1376/1376
(100 %)
1 diff
(100.0 %id)
BC112039 Liver, PCR rescued clones .g 1 to 754 13 to 766 N2S F102S tiling clone,   754/766
(98 %)
8 diff
(99.0 %id)
TI_891530403   .g 1 to 547 548 to 2     Submitted on the opposite strand 547/1247
(43 %)
2 diff
(99.9 %id)
TI_1242418392   .g 1 to 757 815 to 59 N2S F102S   Submitted on the opposite strand 757/1144
(66 %)
2 diff
(99.9 %id)
NM_002260.3   .g 25 to 1235 1 to 1211 exact RefSeq, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 1211/1211
(100 %)
0 diff
(100 %id)
AF260134   .g 32 to 733 1 to 702 exact tiling clone,   702/702
(100 %)
0 diff
(100 %id)
DA299482 hippocampus .g 38 to 591 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
CB144137 Liver .g 47 to 497 1 to 452       452/452
(100 %)
6 diff
(98.7 %id)
BE548442 cervical carcinoma cell line, cervix .g 66 to 821 1 to 750       750/864
(86 %)
30 diff
(96.6 %id)
BX282341 anaplastic oligodendroglioma with 1p/19qloss, brain .g 71 to 557 1 to 487       487/487
(100 %)
1 diff
(99.8 %id)
BF529720 anaplastic oligodendroglioma with 1p/19qloss, brain .g 71 to 814 1 to 741       741/1086
(68 %)
17 diff
(98.5 %id)
BC106069 Cervix, carcinoma .g 73 to 1235 1 to 1163   tiling clone, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 1163/1163
(100 %)
4 diff
(99.7 %id)
BI224372 cervical carcinoma cell line, cervix .g 73 to 779 1 to 716       714/769
(92 %)
21 diff
(97.3 %id)
TI_1242419174   .g 275 to 757 2 to 480       479/1240
(38 %)
9 diff
(99.3 %id)
AK310992 uterus .h 1 to 1178 2 to 1179 N29S tiling clone,   1179/1179
(100 %)
3 diff
(99.8 %id)
DB252621 uterus .h 1 to 541 2 to 542   tiling clone, capped   541/544
(99 %)
3 diff
(99.5 %id)
BF130384 hypernephroma, Kidney .h 87 to 717 1 to 626       626/844
(74 %)
24 diff
(97.2 %id)
BM564505 blood, natural killer cells, cell line .h 300 to 945 1 to 650       650/1266
(51 %)
6 diff
(99.6 %id)
CD641307 pooled .h 371 to 1083 1 to 709       709/711
(99 %)
12 diff
(98.4 %id)
EL736072 mixed .h 457 to 1080 1 to 623       623/623
(100 %)
7 diff
(98.9 %id)
TI_1948224449   .h 457 to 1141 122 to 811       690/1357
(50 %)
25 diff
(98.2 %id)
TI_1948224760   .h 457 to 1149 122 to 816       695/1454
(47 %)
13 diff
(99.2 %id)
TI_1948225081   .h 457 to 924 126 to 592       467/494
(94 %)
6 diff
(98.8 %id)
TI_1948225401   .h 457 to 1157 125 to 829       705/1445
(48 %)
15 diff
(99.0 %id)
TI_1948225402   .h 457 to 1037 124 to 705       582/1259
(46 %)
29 diff
(97.7 %id)
BG181428   .h 1142 to 1500 41 to 399   tiling clone,   359/399
(89 %)
12 diff
(97.0 %id)
BG217343   .h 1142 to 1409 1 to 268   tiling clone,   268/268
(100 %)
2 diff
(99.3 %id)
DB464226 hippocampus .i 1 to 463 1 to 463   tiling clone,   463/463
(100 %)
1 diff
(99.8 %id)
NM_007328.3   .i 1 to 1372 1 to 1372 N29S RefSeq, AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 1372/1372
(100 %)
1 diff
(100.0 %id)
CD639096 pooled .i 51 to 755 1 to 707       707/761
(92 %)
14 diff
(98.2 %id)
X54868   .i 51 to 1372 1 to 1322 N29S tiling clone, AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 1322/1322
(100 %)
1 diff
(100.0 %id)
BC012550 Kidney, hypernephroma .j 1 to 1545 5 to 1549 N29S tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 1545/1546
(99 %)
4 diff
(99.8 %id)
NM_213657.2   .j 1 to 1546 1 to 1546 N29S RefSeq, AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 1546/1546
(100 %)
1 diff
(100.0 %id)
TI_1948242018   .j 382 to 788 126 to 532       407/429
(94 %)
6 diff
(98.7 %id)
EL733409 mixed .j 389 to 1032 1 to 643       643/643
(100 %)
2 diff
(99.7 %id)
TI_1948241513   .j 389 to 792 137 to 540       404/432
(93 %)
6 diff
(98.7 %id)
TI_1948241514   .j 389 to 774 139 to 524       386/415
(93 %)
6 diff
(98.6 %id)
TI_1948242017   .j 389 to 908 140 to 659       520/548
(94 %)
6 diff
(99.0 %id)
TI_1948241766   .j 450 to 1035 1182 to 608     Submitted on the opposite strand 575/1297
(44 %)
21 diff
(98.4 %id)
TI_1948241516   .j 578 to 1035 582 to 125       458/485
(94 %)
0 diff
(100 %id)
TI_1948242020   .j 614 to 1035 547 to 126       422/449
(93 %)
0 diff
(100 %id)
TI_1948241515   .j 631 to 1035 532 to 128       405/432
(93 %)
0 diff
(100 %id)
TI_1948224450   .k 1 to 594 121 to 716   tiling clone,   596/1259
(47 %)
41 diff
(96.8 %id)
TI_1948224761   .k 1 to 549 126 to 675   tiling clone,   550/1209
(45 %)
35 diff
(97.2 %id)
TI_1948225082   .k 1 to 225 127 to 350       224/252
(88 %)
6 diff
(97.7 %id)
BX280271 pooled .k 374 to 873 1 to 500   tiling clone,   500/500
(100 %)
1 diff
(99.8 %id)
BG195440   .l 1 to 522 1 to 522 Q50H T52A I114V G115E R118P ... tiling clone,   651/812
(80 %)
35 diff
(95.7 %id)
BG214676   .l 1 to 521 39 to 559   tiling clone,   521/821
(63 %)
25 diff
(97.0 %id)
AA191156   .m 1 to 180 1 to 180   tiling clone, fully sequenced,   180/180
(100 %)
0 diff
(100 %id)
AA190627   .m 119 to 460 343 to 1   tiling clone, fully sequenced,   343/343
(100 %)
0 diff
(100 %id)
BP394226 pancreatic islet .m 370 to 869 1 to 499   tiling clone, Submitted on the opposite strand 499/499
(100 %)
2 diff
(99.6 %id)
BX480887   .m 739 to 1141 1 to 402   tiling clone,   402/402
(100 %)
3 diff
(99.3 %id)
BX480888   .m 1983 to 2532 557 to 6   tiling clone,   552/557
(99 %)
0 diff
(100 %id)
DA157835 amygdala .n 1 to 588 2 to 589 N29S tiling clone, to resequence, capped   588/588
(100 %)
2 diff
(99.7 %id)
CA396224 eye, RPE/choroid .n 265 to 912 1 to 642   tiling clone,   642/642
(100 %)
4 diff
(99.4 %id)
DB301997 amygdala .n 1539 to 2068 543 to 1   tiling clone, to resequence,   543/543
(100 %)
8 diff
(98.6 %id)
DA293657 hippocampus .o 1 to 563 2 to 565 V4C L5V T7N I8N V9S ... tiling clone, capped   564/564
(100 %)
10 diff
(98.3 %id)
AK307860 hippocampus .p 1 to 901 2 to 902 A23T I30T V56L tiling clone,   902/902
(100 %)
8 diff
(99.2 %id)
DA380994 thalamus .p 1 to 558 2 to 560 V4C L5V T7N I8N V9S ... tiling clone, capped   559/559
(100 %)
9 diff
(98.4 %id)
AK311162 amygdala .q 1 to 939 2 to 940 A23T L33V tiling clone,   940/940
(100 %)
10 diff
(99.0 %id)
DA170750 amygdala .q 1 to 579 2 to 581 A23T L33V capped   580/580
(100 %)
9 diff
(98.5 %id)
DA375498 thalamus .r 1 to 548 2 to 549 exact tiling clone, capped   548/548
(100 %)
1 diff
(99.9 %id)
DA154887 amygdala .s 1 to 472 10 to 481 N102S tiling clone, capped   472/472
(100 %)
3 diff
(99.4 %id)
AA737374 Ewing's sarcoma .t-u 1 to 269 1 to 269 exact tiling clone,   269/269
(100 %)
10 diff
(96.3 %id)
AF078550   Gene KLRC1andKLRC2andKLRC3, variant not shown         This clone was ignored    
BX350415   Gene KLRC1andKLRC2andKLRC3, variant not shown         This clone was ignored    
DA212455 brain Gene KLRC1andKLRC2andKLRC3, variant not shown       capped This clone was ignored    
BU596484 mixed (pool of 40 RNAs) Gene KLRC1andKLRC2andKLRC3, variant not shown         This clone was ignored    
AK295525 hippocampus Gene KLRC1andKLRC2andKLRC3, variant not shown         This clone was ignored    
TI_1242419056   Gene KLRC1andKLRC2andKLRC3, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
BG204661   Gene KLRC1andKLRC2andKLRC3, variant not shown         Suspected internal deletion, suspected internal deletion, suspected internal deletion, suspected internal deletion, suspected internal deletion, suspected internal deletion, suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r, .s, .t-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI