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Gene KLRA1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
75 supporting clones for gene KLRA1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NR_028045.1   .a 1 to 2207 2 to 2208 exact RefSeq, tiling clone,   2208/2208
(100 %)
0 diff
(100 %id)
DA776936 brain .a 1 to 569 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DB255555 uterus .a 141 to 712 2 to 574   capped   573/573
(100 %)
2 diff
(99.7 %id)
AF047445   .a 270 to 1512 1 to 1243 F110Y     1243/1243
(100 %)
3 diff
(99.8 %id)
TI_927043885   .a 278 to 1033 818 to 63 F110Y   Submitted on the opposite strand 756/1220
(61 %)
1 diff
(100.0 %id)
TI_927043890   .a 278 to 1059 48 to 829 F110Y   Submitted on the opposite strand 782/1279
(61 %)
13 diff
(99.0 %id)
TI_927047505   .a 278 to 1033 830 to 75 F110Y   Submitted on the opposite strand 756/1247
(60 %)
2 diff
(99.9 %id)
TI_927047600   .a 278 to 1059 64 to 845 F110Y   Submitted on the opposite strand 782/1280
(61 %)
13 diff
(99.0 %id)
BC101473 Brain, cerebral cortex, PCR rescued clones .a 280 to 1049 1 to 770 F110Y     770/770
(100 %)
2 diff
(99.8 %id)
TI_927043884   .a 282 to 1059 40 to 817 F110Y     778/1301
(59 %)
13 diff
(99.1 %id)
TI_927043889   .a 282 to 1033 819 to 68 F110Y     752/1315
(57 %)
1 diff
(100.0 %id)
TI_927047504   .a 282 to 1033 53 to 802 F110Y K188R I189*     750/1085
(69 %)
18 diff
(98.4 %id)
TI_927047599   .a 282 to 1033 844 to 93 F110Y     752/1295
(58 %)
1 diff
(100.0 %id)
BC101471 Brain, cerebral cortex, PCR rescued clones .a 283 to 1049 1 to 767 F110Y     767/767
(100 %)
2 diff
(99.8 %id)
BC069672 PCR rescued clones .a 297 to 1512 1 to 1216 F110Y available from MGC,   1216/1216
(100 %)
2 diff
(99.9 %id)
BC069697 PCR rescued clones .a 297 to 1512 1 to 1215 exact available from MGC,   1215/1215
(100 %)
3 diff
(99.8 %id)
BC069734 PCR rescued clones .a 297 to 1512 1 to 1216 F110Y available from MGC,   1216/1216
(100 %)
3 diff
(99.8 %id)
AK290077 substantia nigra .a 299 to 1743 1 to 1445 F110Y V140I     1445/1445
(100 %)
3 diff
(99.8 %id)
DA351185 substantia nigra .a 300 to 891 2 to 593   capped   592/592
(100 %)
2 diff
(99.7 %id)
EL736348 mixed .a 366 to 992 1 to 628       628/629
(99 %)
7 diff
(98.9 %id)
TI_1948227352   .a 366 to 804 125 to 563       439/467
(94 %)
10 diff
(97.9 %id)
TI_1948227353   .a 366 to 738 124 to 496       373/400
(93 %)
7 diff
(98.3 %id)
TI_1948227640   .a 366 to 892 126 to 652       527/555
(94 %)
7 diff
(98.8 %id)
TI_1948227641   .a 366 to 711 124 to 469       346/373
(92 %)
7 diff
(98.2 %id)
TI_1948227944   .a 366 to 712 130 to 476       347/374
(92 %)
7 diff
(98.2 %id)
TI_1948228230   .a 366 to 904 128 to 666       539/566
(95 %)
8 diff
(98.6 %id)
TI_1948228231   .a 366 to 738 123 to 495       373/400
(93 %)
7 diff
(98.3 %id)
DB267334 uterus .a 371 to 933 2 to 565   capped   564/564
(100 %)
3 diff
(99.5 %id)
DA070590 cerebellum .a 447 to 1001 2 to 556   capped   555/555
(100 %)
2 diff
(99.7 %id)
DA382273 thalamus .a 558 to 1125 2 to 570   capped   569/569
(100 %)
4 diff
(99.3 %id)
TI_1948228232   .a 589 to 1012 548 to 125       424/451
(94 %)
1 diff
(99.8 %id)
BF971441 adrenal cortex carcinoma, cell line, adrenal gland .a 616 to 1150 1 to 553       528/556
(94 %)
29 diff
(94.8 %id)
TI_1948227642   .a 648 to 1012 490 to 126       365/392
(93 %)
1 diff
(99.8 %id)
TI_1948227945   .a 679 to 1012 460 to 127       334/361
(92 %)
1 diff
(99.8 %id)
TI_927043145   .a 692 to 1059 1 to 368       368/1268
(29 %)
12 diff
(99.1 %id)
TI_927043146   .a 714 to 1059 1 to 347       347/1238
(28 %)
10 diff
(99.2 %id)
TI_1948227643   .a 736 to 1012 405 to 129       277/304
(91 %)
0 diff
(100 %id)
TI_1948227946   .a 758 to 1012 382 to 128       255/282
(90 %)
0 diff
(100 %id)
TI_1948228233   .a 762 to 1012 378 to 128       251/278
(90 %)
0 diff
(100 %id)
TI_1948227355   .a 782 to 1012 361 to 131       231/258
(89 %)
0 diff
(100 %id)
CN342813 embryonic stem cells, cell lines H1, H7, andH9 .a 807 to 1316 7 to 516       510/516
(98 %)
6 diff
(98.9 %id)
FN100457 breast carcinoma .a 892 to 942 50 to 1     Submitted on the opposite strand 50/51
(98 %)
1 diff
(98.1 %id)
AA464841   .a 1090 to 1532 1 to 442       442/442
(100 %)
1 diff
(99.8 %id)
BX118035   .a 1092 to 1489 1 to 397       397/397
(100 %)
1 diff
(99.8 %id)
AK296103 thalamus .b 1 to 1175 1 to 1175 R25G F110Y tiling clone,   1175/1175
(100 %)
4 diff
(99.7 %id)
DA375148 thalamus .b 2 to 563 2 to 563   capped   562/562
(100 %)
2 diff
(99.7 %id)
DA732587   .c 1 to 706 2 to 708   tiling clone, capped   707/739
(95 %)
10 diff
(98.7 %id)
AK304677 uterus .c 441 to 1690 1 to 1250 F80Y V110I tiling clone,   1250/1250
(100 %)
6 diff
(99.6 %id)
DC422054 uterus .c 441 to 992 1 to 552   tiling clone,   552/552
(100 %)
2 diff
(99.7 %id)
AY334570   .c 593 to 1150 1 to 558 F80Y V110I C177X     558/558
(100 %)
2 diff
(99.7 %id)
BX950927   .c 1485 to 1999 1 to 515   tiling clone,   515/515
(100 %)
1 diff
(99.9 %id)
BF887258 testis_normal .c 1693 to 1961 14 to 282   tiling clone,   269/305
(88 %)
9 diff
(97.1 %id)
CN269037 embryonic stem cells, DMSO-treated H9 cellline .c 1804 to 2495 1 to 692   tiling clone,   692/692
(100 %)
6 diff
(99.2 %id)
AA283601 germinal center B cell .c 1974 to 2442 1 to 469     Submitted on the opposite strand 469/469
(100 %)
1 diff
(99.8 %id)
BX090841 Prostate .c 2035 to 2522 1 to 488       488/488
(100 %)
1 diff
(99.8 %id)
AV745133 Pituitary .c 2106 to 2553 1 to 451       451/661
(68 %)
14 diff
(97.9 %id)
BF907137 uterus_tumor .c 2169 to 2559 397 to 12   tiling clone, Submitted on the opposite strand 386/397
(97 %)
0 diff
(100 %id)
BQ772043 Chondrosarcoma Grade II, Left Pelvis .c 2192 to 2914 740 to 19   tiling clone, AAA   722/722
(100 %)
2 diff
(99.8 %id)
TI_149278046   .c 2202 to 2910 799 to 92   AAA   708/710
(99 %)
6 diff
(99.2 %id)
BU678177 lung .c 2221 to 2910 707 to 19   AAA   689/689
(100 %)
5 diff
(99.3 %id)
DB364141   .c 2402 to 2910 522 to 1       522/523
(99 %)
28 diff
(94.7 %id)
AI659462 Prostate .c 2414 to 2910 499 to 1       499/499
(100 %)
11 diff
(97.8 %id)
BF195284 carcinoid, lung .c 2507 to 2893 391 to 1       391/391
(100 %)
10 diff
(97.5 %id)
BE350011 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .c 2517 to 2912 399 to 2       398/410
(97 %)
0 diff
(100 %id)
BE220332 carcinoid, lung .c 2524 to 2910 405 to 13   AAA   393/395
(99 %)
6 diff
(98.5 %id)
CB990552 Human Placenta, placenta .d-u 1 to 636 21 to 670 L2P S3C tiling clone,   650/854
(76 %)
6 diff
(99.3 %id)
CF995060 Human Placenta, placenta .d-u 1 to 868 21 to 894 L2P S3C tiling clone,   874/896
(97 %)
6 diff
(99.4 %id)
C02458   .e-u 1 to 189 1 to 189   tiling clone,   189/189
(100 %)
0 diff
(100 %id)
DR002113 fetal brain .e-u 37 to 687 9 to 660 F47Y N74X K79* tiling clone,   652/661
(98 %)
4 diff
(99.4 %id)
DA979958 synovial membrane tissue from rheumatioidarthritis .f 1 to 563 2 to 564 exact tiling clone, capped   563/563
(100 %)
1 diff
(99.9 %id)
DA988075 synovial membrane tissue from rheumatioidarthritis .f 1 to 540 2 to 541 exact capped   540/548
(98 %)
3 diff
(99.5 %id)
DA918618 small intestine .f 44 to 605 2 to 563 exact tiling clone, capped   562/562
(100 %)
1 diff
(99.9 %id)
DA951100 Spleen .g-u 1 to 553 2 to 554 exact tiling clone, capped   553/553
(100 %)
1 diff
(99.9 %id)
AK310151 synovial membrane tissue from rheumatoidarthritis Gene KLRA1, variant not shown         This clone was ignored    
BI757398 brain Gene KLRA1, variant not shown         This clone was ignored    
TI_57220354   Gene KLRA1, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d-u, .e-u, .f, .g-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI