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Gene KLK4TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
94 supporting clones for gene KLK4 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DB262407 uterus .a 1 to 574 2 to 575   tiling clone, capped   574/574
(100 %)
4 diff
(99.4 %id)
AF113140   .a 562 to 1908 1 to 1347 exact tiling clone,   1347/1347
(100 %)
0 diff
(100 %id)
AF259969 androgen dependent prostate tumor xenograft(CWR22) .a 562 to 1326 1 to 765 H197Q     765/765
(100 %)
7 diff
(99.1 %id)
BC069325 PCR rescued clones .a 562 to 1375 1 to 814 H197Q available from MGC,   814/814
(100 %)
1 diff
(99.9 %id)
BC069403 PCR rescued clones .a 562 to 1376 1 to 815 H197Q available from MGC,   815/815
(100 %)
1 diff
(99.9 %id)
BC069429 PCR rescued clones .a 562 to 1375 1 to 814 H197Q available from MGC,   814/814
(100 %)
8 diff
(99.1 %id)
BC069489 PCR rescued clones .a 562 to 1376 1 to 815 H197Q available from MGC,   815/815
(100 %)
7 diff
(99.2 %id)
BC096175 PCR rescued clones .a 562 to 1385 1 to 824 H197Q     824/824
(100 %)
1 diff
(99.9 %id)
BC096177 PCR rescued clones .a 562 to 1385 1 to 824 R104W H197Q     824/824
(100 %)
2 diff
(99.8 %id)
BC096178 PCR rescued clones .a 562 to 1385 1 to 824 H197Q     824/824
(100 %)
1 diff
(99.9 %id)
EL736198 mixed .a 562 to 1189 1 to 627       627/627
(100 %)
3 diff
(99.6 %id)
EL736208 mixed .a 562 to 1189 1 to 628       628/628
(100 %)
10 diff
(98.5 %id)
NM_004917.3   .a 562 to 1908 1 to 1347 exact RefSeq,   1347/1347
(100 %)
0 diff
(100 %id)
TI_1948227243   .a 562 to 926 130 to 494   fully sequenced,   365/494
(73 %)
9 diff
(98.2 %id)
TI_1948227833   .a 562 to 1325 134 to 898       765/1381
(55 %)
20 diff
(98.6 %id)
TI_1948227834   .a 562 to 1329 132 to 910 E175D C192L A193R G194R G195R ...     779/1398
(55 %)
38 diff
(97.3 %id)
TI_1948228124   .a 562 to 1325 132 to 901       770/1400
(55 %)
30 diff
(97.9 %id)
TI_1948236927   .a 562 to 887 129 to 454       326/353
(92 %)
6 diff
(98.4 %id)
TI_1948236928   .a 562 to 838 131 to 407       277/306
(90 %)
6 diff
(98.1 %id)
TI_1948227835   .a 621 to 1325 834 to 128       707/1071
(66 %)
9 diff
(99.2 %id)
TI_1948227536   .a 622 to 1325 833 to 126       708/1074
(65 %)
12 diff
(98.9 %id)
TI_1948228126   .a 622 to 1325 839 to 126       714/1093
(65 %)
17 diff
(98.5 %id)
CF139171 CNCAP(3)T-225 cell line, Prostate .a 664 to 1151 1 to 488       488/488
(100 %)
4 diff
(99.2 %id)
BU151248 brain, neuroblastoma, cell line .a 666 to 1455 1 to 791       791/945
(83 %)
13 diff
(98.7 %id)
BU188282 leiomyosarcoma, uterus .a 668 to 1044 1 to 377       377/1467
(25 %)
8 diff
(99.5 %id)
AF259965 Prostate .a 669 to 1413 1 to 742       746/742
(100 %)
9 diff
(98.8 %id)
AF464755 prostate cancer .a 671 to 759 1 to 89       89/89
(100 %)
0 diff
(100 %id)
TI_154169392   .a 671 to 1171 81 to 581       501/501
(100 %)
1 diff
(99.9 %id)
TI_1948236929   .a 672 to 1325 779 to 126       654/1495
(43 %)
15 diff
(99.0 %id)
AI557281 Prostate .a 677 to 1396 15 to 720     Submitted on the opposite strand 706/777
(90 %)
27 diff
(96.6 %id)
AF259964 Prostate .a 683 to 1413 1 to 731       731/731
(100 %)
4 diff
(99.5 %id)
AF259968 Prostate .a 683 to 1099 1 to 417       417/419
(99 %)
1 diff
(99.8 %id)
AF259966 prostate tumor xenograft (CWR22) .a 709 to 1326 1 to 618       618/618
(100 %)
1 diff
(99.9 %id)
AX052874   .a 709 to 1326 1 to 618       618/618
(100 %)
1 diff
(99.9 %id)
EC519054 Prostate .a 710 to 808 1 to 99       99/99
(100 %)
0 diff
(100 %id)
EC446644 Prostate .a 711 to 808 1 to 98       98/98
(100 %)
2 diff
(98.0 %id)
TI_1948236575   .a 787 to 1325 1143 to 606     Submitted on the opposite strand 538/1425
(37 %)
32 diff
(97.8 %id)
CD619415   .a 812 to 1411 16 to 615       600/615
(97 %)
11 diff
(98.3 %id)
CD619416   .a 812 to 1397 585 to 1       585/601
(97 %)
4 diff
(99.4 %id)
CD619417   .a 812 to 1397 14 to 598       585/598
(97 %)
12 diff
(98.0 %id)
CD619418   .a 812 to 1397 586 to 1       586/602
(97 %)
2 diff
(99.7 %id)
AA551449 normal prostatic epithelial cells, Prostate .a 817 to 1232 1 to 415       415/415
(100 %)
6 diff
(98.6 %id)
TI_1948227244   .a 896 to 1325 559 to 130   fully sequenced,   430/559
(76 %)
1 diff
(99.9 %id)
TI_1948236930   .a 985 to 1325 470 to 131       340/368
(92 %)
1 diff
(99.8 %id)
BF855758 prostate_normal .a 993 to 1361 23 to 389       367/403
(91 %)
8 diff
(98.1 %id)
EC474799 Prostate .a 1047 to 1136 1 to 89       89/94
(94 %)
2 diff
(97.9 %id)
BE770848 prostate_tumor .a 1087 to 1246 165 to 8       158/165
(95 %)
5 diff
(97.0 %id)
BI020974 marrow .a 1148 to 1402 491 to 237       255/491
(51 %)
1 diff
(99.8 %id)
CD619413   .a 1175 to 1399 17 to 238       222/238
(93 %)
6 diff
(97.5 %id)
CD619414   .a 1175 to 1397 226 to 1       226/243
(93 %)
4 diff
(98.4 %id)
AA503963 Prostate .a 1189 to 1578 399 to 8       392/404
(97 %)
0 diff
(100 %id)
CA425532 Bone, Subchondral Bone .a 1390 to 1908 531 to 19   AAA   513/608
(84 %)
13 diff
(97.9 %id)
AA565161 low-grade prostatic neoplasia, Prostate .a 1648 to 1907 259 to 1       259/259
(100 %)
14 diff
(94.6 %id)
EC478237 Prostate .a 1679 to 1800 1 to 119       119/119
(100 %)
5 diff
(95.8 %id)
AA552779 low-grade prostatic neoplasia, Prostate .a 1679 to 1907 229 to 1       229/229
(100 %)
6 diff
(97.4 %id)
AI674521 Prostate .a 1691 to 1901 218 to 8       211/218
(96 %)
0 diff
(100 %id)
AF126401   .b 1 to 1209 1 to 1217 H176Q tiling clone,   1217/1217
(100 %)
10 diff
(99.2 %id)
AW204063   .b 1005 to 1209 222 to 18   tiling clone, AAA   205/212
(96 %)
3 diff
(98.6 %id)
AA603977 Prostate, prostate tumor .b 1006 to 1209 241 to 38   tiling clone, AAA   204/204
(100 %)
1 diff
(99.6 %id)
AI675815 Prostate .b 1038 to 1209 188 to 17   AAA   172/172
(100 %)
1 diff
(99.5 %id)
AA595489 Prostate, prostate tumor .b 1047 to 1209 191 to 29   AAA   163/163
(100 %)
2 diff
(98.8 %id)
AI888156 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .b 1066 to 1209 166 to 23   AAA   144/144
(100 %)
1 diff
(99.4 %id)
EC499225 Prostate .b 1090 to 1208 124 to 4       121/124
(97 %)
0 diff
(100 %id)
EC502226 Prostate .b 1107 to 1208 1 to 102       102/105
(97 %)
1 diff
(99.1 %id)
AI821429   .b 1130 to 1636 26 to 534       509/534
(95 %)
9 diff
(98.4 %id)
AA569484   .b 1136 to 1474 9 to 347   tiling clone,   339/347
(97 %)
6 diff
(98.3 %id)
BE770930 prostate_tumor .b 1187 to 1671 1 to 478   tiling clone,   478/482
(99 %)
9 diff
(98.2 %id)
BE770921 prostate_tumor .b 1194 to 1577 1 to 382       382/386
(98 %)
8 diff
(98.0 %id)
AY923170 Prostate .c 1 to 777 1 to 777 exact tiling clone,   777/777
(100 %)
0 diff
(100 %id)
AF259970 prostate tumor xenograft (CWR22) .d 1 to 701 1 to 702 exact tiling clone,   702/702
(100 %)
3 diff
(99.6 %id)
AX052876   .d 1 to 701 1 to 701 M69S L70S I71S K72S L73W ...     701/701
(100 %)
4 diff
(99.5 %id)
AA336074 endometrium .e 1 to 216 1 to 216   tiling clone,   216/216
(100 %)
0 diff
(100 %id)
CF134924 CNCAP(3)T-225 cell line, Prostate .e 22 to 428 1 to 407       407/407
(100 %)
5 diff
(98.8 %id)
TI_154163018   .e 29 to 745 81 to 810   tiling clone,   730/730
(100 %)
32 diff
(95.7 %id)
AF259971   .e 74 to 554 1 to 480   tiling clone,   480/480
(100 %)
1 diff
(99.8 %id)
AX052875   .e 74 to 554 1 to 480       480/480
(100 %)
1 diff
(99.8 %id)
AK309958 Prostate .f 1 to 982 2 to 983 R40G tiling clone,   983/983
(100 %)
3 diff
(99.7 %id)
DA865829 Prostate .f 1 to 572 2 to 573 R40G capped   572/572
(100 %)
2 diff
(99.7 %id)
AX052880   .f 558 to 1188 1 to 635   tiling clone,   635/635
(100 %)
10 diff
(98.5 %id)
AI675523 Prostate .f 741 to 1100 360 to 1       360/360
(100 %)
2 diff
(99.5 %id)
AI824665 Prostate .f 902 to 1103 203 to 1       203/203
(100 %)
2 diff
(99.1 %id)
BC096176 PCR rescued clones .g 1 to 813 1 to 813 exact tiling clone,   813/813
(100 %)
1 diff
(99.9 %id)
CF142439 CNCAP(3)T-225 cell line, Prostate .h 1 to 400 1 to 401 T99N L100S A101C S102L F103V ... tiling clone,   401/401
(100 %)
6 diff
(98.6 %id)
AX052877   .i 1 to 835 1 to 830 H37Q tiling clone,   830/830
(100 %)
8 diff
(99.1 %id)
CF147341 CNCAP(3)T-225 cell line, Prostate .j 1 to 639 8 to 641   tiling clone,   634/641
(98 %)
12 diff
(98.2 %id)
CF147425 CNCAP(3)T-225 cell line, Prostate .j 1 to 687 8 to 687 H37Q P67R C68V G69A Q70K ... tiling clone,   680/690
(98 %)
14 diff
(98.0 %id)
TI_154179957   .j 1 to 715 70 to 771 H37Q P67R C68V Q70K V71L ... tiling clone,   702/875
(80 %)
21 diff
(97.6 %id)
TI_154180056   .j 1 to 765 79 to 829 H37Q P67R C68V G69A Q70K ... tiling clone,   751/885
(84 %)
22 diff
(97.6 %id)
BP327636 prostata .k-u 1 to 581 1 to 581 V72G tiling clone,   581/581
(100 %)
5 diff
(99.2 %id)
BQ335344 marrow .k-u 157 to 544 387 to 2   tiling clone,   386/387
(99 %)
0 diff
(100 %id)
AX052879   .l 1 to 457 1 to 455 L24P I25S K26S L27W D28T ... tiling clone,   455/455
(100 %)
3 diff
(99.4 %id)
AF259967 Prostate .l 17 to 457 1 to 440 exact tiling clone,   440/440
(100 %)
2 diff
(99.6 %id)
AX052878   .l 17 to 457 1 to 438 exact     438/438
(100 %)
4 diff
(99.1 %id)
AI686689 Prostate Gene KLK4, variant not shown       AAA Suspected internal deletion, this clone was ignored    
CB051271 Prostate Gene KLK4, variant not shown       fully sequenced, AAA Suspected internal deletion, this clone was ignored    
CB051272 Prostate Gene KLK4, variant not shown       fully sequenced, Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k-u, .l Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI