cDNA accession Links to the sequence |
Tissue most 5' clones in red |
Match mRNA |
From bp to bp in mRNA |
From bp to bp in accs. |
Clone encodes complete protein (with AA variation) |
Features | Anomalies detected by AceView |
Accession match over (% length) |
Base differences relative to genome (% identity) |
AK001434 | .a | 61 to 2386 | 1 to 2326 | exact | tiling clone, available from FLJ, | 2326/2326 (100 %) | 1 diff (100.0 %id) | ||
BC034470 | testis | .a | 42 to 2386 | 8 to 2352 | exact | available from MGC, AAA | 2345/2345 (100 %) | 4 diff (99.9 %id) | |
DC307257 | cerebellum | .a | 14 to 551 | 1 to 538 | 538/538 (100 %) | 0 diff (100 %id) | |||
DA232068 | brain | .a | 62 to 631 | 2 to 571 | capped | 570/570 (100 %) | 0 diff (100 %id) | ||
DA392633 | thalamus | .a | 2216 to 2797 | 2 to 583 | tiling clone, capped | 582/582 (100 %) | 2 diff (99.7 %id) | ||
DA410272 | thalamus | .a | 695 to 1236 | 2 to 543 | capped | 542/542 (100 %) | 1 diff (99.9 %id) | ||
BX092160 | brain, pineal gland | .a | 167 to 900 | 734 to 1 | Submitted on the opposite strand | 734/734 (100 %) | 0 diff (100 %id) | ||
BP221853 | .a | 36 to 618 | 1 to 583 | 583/583 (100 %) | 0 diff (100 %id) | ||||
AL704740 | human skeletal muscle | .a | 2321 to 2764 | 1 to 444 | tiling clone, | 444/444 (100 %) | 3 diff (99.4 %id) | ||
AL704244 | human skeletal muscle | .a | 610 to 1160 | 33 to 583 | 551/583 (94 %) | 6 diff (99.0 %id) | |||
BX501744 | Liver | .a | 1303 to 1864 | 1 to 562 | 562/562 (100 %) | 1 diff (99.9 %id) | |||
EC570942 | Prostate | .a | 1986 to 2076 | 1 to 91 | 91/99 (91 %) | 2 diff (98.0 %id) | |||
DB512383 | testis | .a | 1960 to 2386 | 1 to 424 | Submitted on the opposite strand | 424/424 (100 %) | 5 diff (98.9 %id) | ||
DB452291 | testis | .a | 610 to 1102 | 11 to 503 | 493/503 (98 %) | 6 diff (98.9 %id) | |||
DB517851 | testis | .a | 1942 to 2386 | 1 to 445 | Submitted on the opposite strand | 445/445 (100 %) | 1 diff (99.8 %id) | ||
DB456723 | testis | .a | 64 to 557 | 1 to 494 | 494/494 (100 %) | 1 diff (99.8 %id) | |||
DB522151 | testis | .a | 1909 to 2386 | 1 to 478 | Submitted on the opposite strand | 478/478 (100 %) | 0 diff (100 %id) | ||
DB457217 | testis | .a | 40 to 545 | 1 to 506 | 506/506 (100 %) | 6 diff (98.9 %id) | |||
DB522667 | testis | .a | 1923 to 2386 | 1 to 464 | Submitted on the opposite strand | 464/464 (100 %) | 8 diff (98.3 %id) | ||
DB462699 | testis | .a | 64 to 557 | 1 to 494 | 494/494 (100 %) | 0 diff (100 %id) | |||
DB528157 | testis | .a | 1916 to 2386 | 1 to 471 | Submitted on the opposite strand | 471/471 (100 %) | 0 diff (100 %id) | ||
AA708270 | pineal gland | .a | 122 to 416 | 1 to 292 | Submitted on the opposite strand | 292/292 (100 %) | 5 diff (98.3 %id) | ||
AA452595 | .a | 122 to 306 | 1 to 184 | Submitted on the opposite strand | 184/184 (100 %) | 2 diff (99.0 %id) | |||
AA460589 | .a | 1771 to 2064 | 1 to 293 | fully sequenced, | 293/293 (100 %) | 0 diff (100 %id) | |||
AA461516 | .a | 2034 to 2386 | 353 to 1 | fully sequenced, | 353/353 (100 %) | 0 diff (100 %id) | |||
AA904476 | pooled | .a | 122 to 360 | 1 to 237 | Submitted on the opposite strand | 237/237 (100 %) | 3 diff (98.8 %id) | ||
AW015346 | .a | 101 to 379 | 1 to 279 | Submitted on the opposite strand | 279/279 (100 %) | 1 diff (99.7 %id) | |||
AW269055 | pooled | .a | 122 to 441 | 1 to 320 | Submitted on the opposite strand | 320/451 (70 %) | 1 diff (99.8 %id) | ||
AW615126 | pooled germ cell tumors | .a | 122 to 493 | 1 to 372 | Submitted on the opposite strand | 372/372 (100 %) | 1 diff (99.8 %id) | ||
BG719371 | testis | .a | 35 to 783 | 1 to 750 | 750/754 (99 %) | 15 diff (98.1 %id) | |||
BI463857 | testis | .a | 1 to 783 | 1 to 785 | tiling clone, | 785/785 (100 %) | 8 diff (99.0 %id) | ||
BI461089 | testis | .a | 610 to 1075 | 16 to 480 | 465/480 (96 %) | 6 diff (98.8 %id) | |||
BI559929 | testis | .a | 194 to 785 | 127 to 719 | 593/719 (82 %) | 9 diff (98.8 %id) | |||
BM477711 | leiomyosarcoma, uterus | .a | 2529 to 3336 | 1 to 806 | tiling clone, | 806/1070 (75 %) | 13 diff (98.8 %id) | ||
TI_44348411 | .a | 194 to 785 | 246 to 838 | 593/838 (70 %) | 9 diff (99.0 %id) | ||||
NM_018143.1 | .a | 61 to 2386 | 1 to 2326 | exact | RefSeq, | 2326/2326 (100 %) | 1 diff (100.0 %id) | ||
DA697549 | .a | 1551 to 2118 | 2 to 569 | capped | 568/569 (99 %) | 2 diff (99.7 %id) | |||
AU128278 | .a | 62 to 686 | 2 to 628 | capped | 627/627 (100 %) | 7 diff (98.9 %id) | |||
AU150587 | .a | 1823 to 2386 | 570 to 1 | 570/571 (99 %) | 20 diff (96.5 %id) | ||||
DR002939 | fetal brain | .a | 42 to 562 | 1 to 521 | 521/521 (100 %) | 4 diff (99.3 %id) | |||
DB024986 | testis | .a | 610 to 1171 | 2 to 564 | capped | 563/563 (100 %) | 1 diff (99.9 %id) | ||
DB045274 | testis | .a | 41 to 611 | 2 to 573 | capped | 572/572 (100 %) | 1 diff (99.9 %id) | ||
AK301952 | testis | .a | 41 to 611 | 2 to 573 | Suspected internal deletion, this clone was ignored | 572/572 (100 %) | 1 diff (99.9 %id) | ||
BG289441 | bladder, transitional cell papilloma, cell line | Gene KLHL11, variant not shown | This clone was ignored | ||||||
DA808044 | brain | Gene KLHL11, variant not shown | capped | This clone was ignored | |||||
DC396392 | testis | Gene KLHL11, variant not shown | Suspected internal deletion, this clone was ignored |