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Gene KLF15TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
62 supporting clones for gene KLF15 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BG898891 cartilage .a 1 to 452 79 to 530   tiling clone,   452/469
(96 %)
8 diff
(98.3 %id)
CV569680 cornea, eye .a 15 to 176 1 to 162       162/162
(100 %)
0 diff
(100 %id)
BC036733 Skin, melanotic melanoma. .a 49 to 2573 12 to 2528 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 2517/2517
(100 %)
5 diff
(99.9 %id)
BM452280 melanotic melanoma, skin .a 50 to 496 1 to 447       447/1463
(30 %)
9 diff
(99.4 %id)
NM_014079.3   .a 50 to 2573 1 to 2524 exact RefSeq, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 2524/2524
(100 %)
0 diff
(100 %id)
TI_1948126840   .a 230 to 766 123 to 661       539/1138
(47 %)
13 diff
(98.9 %id)
TI_1948126841   .a 230 to 796 130 to 700       571/1425
(40 %)
20 diff
(98.6 %id)
TI_1948127155   .a 230 to 830 130 to 730       601/1124
(53 %)
38 diff
(96.7 %id)
TI_1948127156   .a 230 to 1074 126 to 981       856/1383
(61 %)
33 diff
(97.7 %id)
TI_1948127477   .a 230 to 765 129 to 665       537/1156
(46 %)
14 diff
(98.8 %id)
TI_1948127478   .a 230 to 986 134 to 886       753/1357
(55 %)
38 diff
(97.2 %id)
TI_1948127732   .a 230 to 1007 123 to 895       773/1074
(71 %)
22 diff
(98.0 %id)
TI_1948127733   .a 230 to 1035 129 to 944       816/1344
(60 %)
28 diff
(98.0 %id)
TI_1948127775   .a 230 to 793 118 to 680       563/1092
(51 %)
31 diff
(97.2 %id)
AB029254   .a 232 to 1482 1 to 1251 exact     1251/1251
(100 %)
3 diff
(99.8 %id)
CV030774 mixed .a 232 to 900 1 to 664       664/666
(99 %)
9 diff
(98.7 %id)
BX280931 cervix .a 247 to 758 1 to 512       512/512
(100 %)
0 diff
(100 %id)
BI094007 cervix .a 247 to 1050 1 to 804       804/804
(100 %)
9 diff
(98.9 %id)
TI_1948127734   .a 513 to 1481 1089 to 121       969/1315
(73 %)
64 diff
(95.2 %id)
TI_1948127157   .a 521 to 1481 1075 to 125       951/1316
(72 %)
35 diff
(97.4 %id)
TI_1948126842   .a 535 to 1481 1071 to 125       947/1336
(70 %)
43 diff
(96.8 %id)
TI_1948127735   .a 678 to 1481 920 to 132       789/1089
(72 %)
27 diff
(97.6 %id)
BE783185 eye, retinoblastoma .a 742 to 1458 1 to 713       713/732
(97 %)
9 diff
(98.8 %id)
TI_1948127777   .a 804 to 1481 759 to 63       697/1298
(53 %)
42 diff
(96.8 %id)
TI_1948126843   .a 817 to 1481 790 to 127       664/1115
(59 %)
31 diff
(97.3 %id)
TI_1948127480   .a 828 to 1481 777 to 128       650/1108
(58 %)
21 diff
(98.2 %id)
TI_1948127158   .a 835 to 1481 769 to 126       644/1122
(57 %)
34 diff
(97.0 %id)
TI_1948127778   .a 910 to 1481 707 to 131       577/1169
(49 %)
30 diff
(97.5 %id)
BG820336 anaplastic oligodendroglioma with 1p/19qloss, brain .a 952 to 1511 1 to 561       561/564
(99 %)
3 diff
(99.5 %id)
BG898219 cartilage .a 981 to 1409 51 to 479       429/479
(89 %)
15 diff
(96.9 %id)
BM787063 Ascites, stomach .a 1162 to 1751 1 to 589       589/589
(100 %)
1 diff
(99.9 %id)
EC493261 Prostate .a 1333 to 1424 1 to 94       94/97
(96 %)
3 diff
(97.0 %id)
BM713855 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1526 to 1930 1 to 405     Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 405/405
(100 %)
1 diff
(99.8 %id)
BG912547 anaplastic oligodendroglioma with 1p/19qloss, brain .a 1585 to 2047 1 to 459   tiling clone,   459/844
(54 %)
5 diff
(99.5 %id)
BQ876364 sympathetic trunk .a 1621 to 2034 1 to 414       414/1050
(39 %)
8 diff
(99.3 %id)
EC573580 Prostate .a 1678 to 1781 1 to 103       103/103
(100 %)
5 diff
(95.2 %id)
BX090722 anaplastic oligodendroglioma, brain .a 2050 to 2551 1 to 503   tiling clone, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 503/503
(100 %)
3 diff
(99.5 %id)
AW014734   .a 2072 to 2571 517 to 18   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 500/519
(96 %)
1 diff
(99.9 %id)
BE463683 Kidney .a 2078 to 2573 496 to 1       496/496
(100 %)
0 diff
(100 %id)
BU738907 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 2088 to 2571 501 to 19   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 483/483
(100 %)
1 diff
(99.8 %id)
AI934736 anaplastic oligodendroglioma, brain .a 2091 to 2551 472 to 12   AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 461/461
(100 %)
0 diff
(100 %id)
AI859036 anaplastic oligodendroglioma, brain .a 2097 to 2553 457 to 1       457/457
(100 %)
0 diff
(100 %id)
BE326850 Kidney .a 2101 to 2573 473 to 1       473/473
(100 %)
0 diff
(100 %id)
AI369833 anaplastic oligodendroglioma, brain .a 2104 to 2551 448 to 1       448/448
(100 %)
0 diff
(100 %id)
AI563981 anaplastic oligodendroglioma, brain .a 2106 to 2551 446 to 1       446/446
(100 %)
0 diff
(100 %id)
AI823575 Kidney .a 2109 to 2544 445 to 10       436/445
(97 %)
0 diff
(100 %id)
BE892379 melanotic melanoma, skin .a 2114 to 2568 1 to 453       453/453
(100 %)
2 diff
(99.6 %id)
BF939596 Kidney .a 2117 to 2574 462 to 5       458/462
(99 %)
0 diff
(100 %id)
BF378438 uterus .a 2119 to 2430 310 to 2       309/310
(99 %)
0 diff
(100 %id)
AI569813 Kidney .a 2128 to 2572 449 to 5       445/449
(99 %)
0 diff
(100 %id)
AI360374 anaplastic oligodendroglioma, brain .a 2131 to 2571 441 to 1       441/441
(100 %)
0 diff
(100 %id)
EC500522 Prostate .a 2166 to 2280 1 to 115       115/115
(100 %)
3 diff
(97.4 %id)
BF434881 Kidney .a 2190 to 2571 385 to 3       383/385
(99 %)
0 diff
(100 %id)
BF434823 Kidney .a 2207 to 2566 360 to 1       360/360
(100 %)
11 diff
(97.0 %id)
BX649049 Liver .a 2241 to 2573 10 to 342   available from DKFZ, AAA Possibly primed on the genome, locally A rich (12/14 A in genome downstream of last aligned base) 333/342
(97 %)
6 diff
(98.3 %id)
BF941308 dorsal root ganglia .a 2281 to 2574 295 to 1       295/378
(78 %)
2 diff
(99.5 %id)
AA541340 metastatic prostate bone lesion .a 2362 to 2564 9 to 210       202/217
(93 %)
2 diff
(99.1 %id)
BE552120 Kidney .a 2377 to 2572 196 to 1       196/196
(100 %)
1 diff
(99.5 %id)
EC556441 Prostate .a 2436 to 2549 116 to 5       112/116
(96 %)
0 diff
(100 %id)
BU165879 melanotic melanoma, skin .b 1 to 642 1 to 649 G2A G78A V178I V189G E190G ... tiling clone,   649/902
(71 %)
24 diff
(97.4 %id)
TI_154181413   .c 1 to 754 83 to 832 exact tiling clone, AAA   750/775
(96 %)
13 diff
(98.4 %id)
DA637726 Liver .d 1 to 546 2 to 547 exact tiling clone, capped   546/546
(100 %)
0 diff
(100 %id)
BE536624 cervix Gene KLF15, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC