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Gene KLF12TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
209 supporting clones for gene KLF12 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA376761 thalamus .a 1 to 287 7 to 295   capped   294/553
(53 %)
3 diff
(99.5 %id)
AK291397 brain .a 1 to 1617 2 to 1618 exact tiling clone,   1618/1618
(100 %)
2 diff
(99.9 %id)
DA790078 brain .a 1 to 287 2 to 289   capped   288/335
(85 %)
2 diff
(99.5 %id)
DN991791 brain, whole brain .a 25 to 676 1 to 652       652/652
(100 %)
4 diff
(99.4 %id)
CN421623 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 44 to 764 1 to 721       721/721
(100 %)
0 diff
(100 %id)
DA554134   .a 112 to 674 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
AU280440   .a 211 to 776 4 to 569       566/569
(99 %)
7 diff
(98.8 %id)
DA051454   .a 265 to 816 3 to 554   capped   552/553
(99 %)
1 diff
(99.9 %id)
DB326555 brain .a 2352 to 2728 378 to 1   tiling clone,   378/378
(100 %)
1 diff
(99.8 %id)
NM_007249.4   .b 1 to 10904 5 to 10908 exact RefSeq, AAA Possibly primed on the genome, locally A rich (11/11 A in genome downstream of last aligned base) 10908/10908
(100 %)
0 diff
(100 %id)
DA049766   .b 1 to 546 2 to 548   tiling clone, capped   547/547
(100 %)
2 diff
(99.7 %id)
DA714945   .b 17 to 567 2 to 550   tiling clone, capped   549/549
(100 %)
1 diff
(99.9 %id)
DA702485   .b 19 to 558 2 to 538   capped   537/537
(100 %)
2 diff
(99.7 %id)
AL701841 human skeletal muscle .b 106 to 528 1 to 423       423/423
(100 %)
0 diff
(100 %id)
DB125574 thymus .b 153 to 725 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
BX492560   .b 186 to 672 55 to 542       489/542
(90 %)
7 diff
(98.8 %id)
BC019680 Brain, anaplastic oligodendroglioma with1p/19q loss .b 192 to 1701 1 to 1510 exact available from MGC, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 1510/1510
(100 %)
2 diff
(99.9 %id)
BG910766 anaplastic oligodendroglioma with 1p/19qloss, brain .b 192 to 888 12 to 716       705/730
(96 %)
28 diff
(96.2 %id)
AF330041 brain; liver .b 216 to 10828 6 to 10615 K6N tiling clone,   10610/10616
(99 %)
30 diff
(99.8 %id)
AJ243274   .b 219 to 1427 1 to 1209 P246L     1209/1209
(100 %)
2 diff
(99.9 %id)
CV029379 mixed .b 219 to 843 1 to 625       625/625
(100 %)
0 diff
(100 %id)
TI_1948126157   .b 250 to 888 161 to 800       640/1419
(45 %)
14 diff
(99.1 %id)
TI_1948126301   .b 250 to 873 161 to 785       625/1347
(46 %)
13 diff
(99.1 %id)
TI_1948126458   .b 250 to 891 164 to 807   fully sequenced,   644/807
(79 %)
12 diff
(98.6 %id)
TI_1948126602   .b 250 to 939 161 to 850       690/1351
(51 %)
22 diff
(98.4 %id)
CR737689 melanocyte .b 444 to 1152 1 to 709       709/709
(100 %)
1 diff
(99.9 %id)
BU160173 melanotic melanoma, skin .b 576 to 1089 41 to 555       515/986
(52 %)
7 diff
(99.3 %id)
TI_1948126459   .b 653 to 1431 895 to 105   fully sequenced,   791/895
(88 %)
27 diff
(97.0 %id)
AA349967 brain .b 709 to 1068 1 to 360       360/360
(100 %)
0 diff
(100 %id)
F12639 brain, total brain .b 709 to 991 1 to 283       283/283
(100 %)
0 diff
(100 %id)
T74529 whole brain .b 710 to 1087 1 to 377       377/508
(74 %)
7 diff
(98.7 %id)
AA007205 whole brain .b 874 to 1205 1 to 338       338/340
(99 %)
11 diff
(96.8 %id)
R23427 whole brain .b 875 to 1235 1 to 367       367/368
(99 %)
12 diff
(96.8 %id)
R23424 whole brain .b 887 to 1232 12 to 362       353/362
(97 %)
13 diff
(96.5 %id)
R23428 whole brain .b 887 to 1246 12 to 378       369/395
(93 %)
17 diff
(95.7 %id)
TI_1948126158   .b 887 to 1431 651 to 105       547/1307
(41 %)
2 diff
(99.9 %id)
TI_1948126302   .b 887 to 1431 678 to 133       546/1442
(37 %)
4 diff
(99.8 %id)
BX955866   .b 1493 to 1964 1 to 472       472/472
(100 %)
3 diff
(99.4 %id)
FN089283 breast carcinoma .b 1546 to 1614 1 to 70       70/70
(100 %)
1 diff
(98.6 %id)
FN102491 breast carcinoma .b 1546 to 1614 1 to 66       66/66
(100 %)
3 diff
(95.5 %id)
BM729261 eye, fetal eye .b 1606 to 2067 1 to 461   tiling clone, fully sequenced, Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 461/461
(100 %)
2 diff
(99.6 %id)
FN053051 breast carcinoma .b 1630 to 1685 57 to 1     Submitted on the opposite strand 57/57
(100 %)
1 diff
(98.3 %id)
AV749685 Pituitary .b 1638 to 2125 1 to 483       483/490
(98 %)
19 diff
(96.2 %id)
AA814471 germinal center B cell .b 1740 to 2079 353 to 14   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 340/340
(100 %)
0 diff
(100 %id)
AA758937   .b 1852 to 2069 221 to 4       218/221
(98 %)
0 diff
(100 %id)
N49369 multiple sclerosis lesions .b 1854 to 2012 1 to 159       159/159
(100 %)
1 diff
(99.4 %id)
TI_154102438   .b 1881 to 2638 835 to 90   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 746/789
(94 %)
29 diff
(96.4 %id)
BQ005683 Chondrosarcoma, Left Pubic Bone .b 1924 to 2638 732 to 19   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 714/714
(100 %)
2 diff
(99.8 %id)
BM682175 eye, fetal eye .b 2037 to 2626 610 to 20   tiling clone, fully sequenced, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 591/591
(100 %)
1 diff
(99.9 %id)
DB509648 testis .b 2053 to 2467 1 to 418   AAA Submitted on the opposite strand 418/418
(100 %)
14 diff
(96.7 %id)
AI754391 bone marrow stroma .b 2087 to 2626 564 to 25   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 540/540
(100 %)
0 diff
(100 %id)
CA445518 Chondrosarcoma, Left Pubic Bone .b 2102 to 2638 554 to 19   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 536/536
(100 %)
3 diff
(99.5 %id)
AI275705 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .b 2201 to 2445 246 to 1       246/246
(100 %)
1 diff
(99.6 %id)
N49268 multiple sclerosis lesions .b 2221 to 2629 409 to 1       409/409
(100 %)
0 diff
(100 %id)
AA713592 germinal center B cell .b 2226 to 2589 364 to 1       364/364
(100 %)
0 diff
(100 %id)
R44212 whole brain .b 2264 to 2629 381 to 10       372/387
(96 %)
0 diff
(100 %id)
R44209 whole brain .b 2306 to 2629 340 to 10       331/341
(97 %)
0 diff
(100 %id)
R44213 whole brain .b 2306 to 2629 339 to 10       330/342
(96 %)
0 diff
(100 %id)
AA768516 germinal center B cell .b 2307 to 2589 284 to 1       284/284
(100 %)
5 diff
(98.3 %id)
F10254 brain, total brain .b 2331 to 2628 298 to 1       298/298
(100 %)
0 diff
(100 %id)
AA007204 whole brain .b 2355 to 2629 278 to 4       275/278
(98 %)
0 diff
(100 %id)
AA349966 brain .b 2364 to 2628 265 to 1       265/265
(100 %)
0 diff
(100 %id)
AK096503 brain .b 3178 to 6192 1 to 3016   tiling clone, available from FLJ,   3016/3016
(100 %)
3 diff
(100.0 %id)
DA771384 brain .b 3179 to 3745 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
BP280035   .b 3407 to 3995 1 to 589       589/589
(100 %)
0 diff
(100 %id)
AA281180 germinal center B cell .b 3451 to 3833 4 to 391       388/400
(97 %)
9 diff
(97.8 %id)
AA291250 germinal center B cell .b 4012 to 4501 1 to 488       488/488
(100 %)
1 diff
(99.8 %id)
CR746224 germinal center B cell .b 4098 to 4816 1 to 719       719/719
(100 %)
0 diff
(100 %id)
AA521502 germinal center B cell .b 4237 to 4883 636 to 1       636/726
(87 %)
18 diff
(97.6 %id)
AW969202   .b 4343 to 4874 541 to 10     Submitted on the opposite strand 532/541
(98 %)
0 diff
(100 %id)
T07747   .b 4472 to 4832 1 to 362       362/362
(100 %)
2 diff
(99.5 %id)
AA284116 germinal center B cell .b 4571 to 4811 241 to 1       241/241
(100 %)
0 diff
(100 %id)
AA904480 pooled .b 4615 to 4819 205 to 1       205/205
(100 %)
0 diff
(100 %id)
AI215580 pooled .b 4628 to 4881 254 to 1       254/254
(100 %)
1 diff
(99.7 %id)
BF185040 bone marrow, from chronic myelogenous leukemia .b 4643 to 5256 1 to 608       608/629
(96 %)
30 diff
(95.3 %id)
AA329270   .b 4718 to 5142 13 to 440   tiling clone,   428/442
(96 %)
10 diff
(97.8 %id)
BM470086 melanotic melanoma, skin .b 4793 to 5506 1 to 723       723/1079
(67 %)
19 diff
(98.3 %id)
DB220572 trachea .b 5195 to 5756 2 to 564   capped   563/563
(100 %)
2 diff
(99.7 %id)
BP249943 hippocampus .b 5384 to 5985 1 to 603       603/603
(100 %)
5 diff
(99.2 %id)
DA804161 brain .b 5481 to 6021 2 to 542   capped   541/541
(100 %)
1 diff
(99.9 %id)
AW893935 nervous_normal .b 5486 to 5722 9 to 241       233/241
(96 %)
6 diff
(97.6 %id)
BU631798 cell lines, Chondrosarcoma .b 5557 to 6211 673 to 19   AAA Possibly primed on the genome, locally A rich (11/12 A in genome downstream of last aligned base) 655/655
(100 %)
1 diff
(99.9 %id)
BP249926 hippocampus .b 5568 to 6160 1 to 592       592/592
(100 %)
1 diff
(99.9 %id)
AI703090 carcinoid, lung .b 5594 to 6183 598 to 9       590/598
(98 %)
0 diff
(100 %id)
TI_154066480   .b 5600 to 6192 684 to 93   AAA Possibly primed on the genome, locally A rich (11/12 A in genome downstream of last aligned base) 592/595
(99 %)
6 diff
(99.0 %id)
AI301965 2 pooled tumors (clear cell type), Kidney .b 5663 to 6195 533 to 1       533/533
(100 %)
1 diff
(99.9 %id)
DB325752 brain .b 5663 to 6192 532 to 1       532/532
(100 %)
3 diff
(99.5 %id)
AW268450 pooled .b 5689 to 6192 504 to 1       504/510
(98 %)
1 diff
(99.9 %id)
DW408607 Liver .b 5700 to 6026 17 to 343       327/343
(95 %)
6 diff
(98.3 %id)
BE328128 carcinoid, lung .b 5712 to 6213 502 to 1       502/502
(100 %)
0 diff
(100 %id)
AI768544 Kidney .b 5736 to 6211 475 to 1       475/475
(100 %)
2 diff
(99.6 %id)
BX119819 lymph node, lymphoma, follicular mixed small and largecell .b 5790 to 6213 438 to 15   AAA Possibly primed on the genome, locally A rich (11/12 A in genome downstream of last aligned base) 424/424
(100 %)
0 diff
(100 %id)
AI356920 lymph node, lymphoma, follicular mixed small and largecell .b 5811 to 6214 404 to 1       404/404
(100 %)
0 diff
(100 %id)
DA243555 brain .b 5933 to 6501 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DB226705 trachea .b 5943 to 6533 2 to 592   capped   591/591
(100 %)
0 diff
(100 %id)
AA281012 germinal center B cell .b 5971 to 6192 222 to 1       222/222
(100 %)
0 diff
(100 %id)
BP229645 brain .b 6364 to 6948 1 to 582       582/582
(100 %)
8 diff
(98.7 %id)
DA319395 hippocampus .b 6538 to 7087 2 to 551   tiling clone, capped   550/550
(100 %)
2 diff
(99.7 %id)
AA332812 Embryo, 8 weeks .b 6752 to 7065 1 to 317       317/321
(98 %)
7 diff
(97.9 %id)
AK126412 uterus .b 6783 to 9339 1 to 2558   available from FLJ,   2558/2558
(100 %)
6 diff
(99.8 %id)
DB263487 uterus .b 6784 to 7266 2 to 487   capped   486/487
(99 %)
11 diff
(97.8 %id)
DA803679 brain .b 6918 to 7482 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA508465 brain .b 6994 to 7563 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
BP233397 coronary artery .b 7208 to 7608 1 to 399       399/400
(99 %)
6 diff
(98.5 %id)
CN421624 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 7270 to 7931 68 to 729       662/732
(90 %)
3 diff
(99.6 %id)
DA528406 brain .b 7320 to 7923 2 to 606   capped   605/605
(100 %)
4 diff
(99.4 %id)
BM711068 eye, fetal eyes .b 7320 to 7851 1 to 532   tiling clone, Possibly primed on the genome, locally A rich (11/11 A in genome downstream of last aligned base) 532/532
(100 %)
3 diff
(99.5 %id)
BP195585 brain .b 7328 to 7909 1 to 582       582/582
(100 %)
10 diff
(98.3 %id)
AK094419 cerebellum .b 7357 to 9331 1 to 1975   available from FLJ,   1975/1977
(99 %)
4 diff
(99.8 %id)
DA068920 cerebellum .b 7358 to 7920 2 to 564   capped   563/563
(100 %)
2 diff
(99.7 %id)
AL699914 human skeletal muscle .b 7375 to 8029 1 to 656       656/656
(100 %)
4 diff
(99.4 %id)
BE937218 stomach .b 7474 to 8062 46 to 629       584/647
(90 %)
16 diff
(97.6 %id)
CN421622 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 7484 to 8128 1 to 646       646/646
(100 %)
6 diff
(99.1 %id)
DA644862   .b 7565 to 8094 2 to 531   capped   530/530
(100 %)
3 diff
(99.5 %id)
Z43200 brain, total brain .b 7668 to 8032 1 to 364       364/364
(100 %)
4 diff
(99.0 %id)
AA007195 whole brain .b 7668 to 8017 1 to 350       350/350
(100 %)
3 diff
(99.2 %id)
R13713 whole brain .b 7669 to 8121 1 to 460       460/528
(87 %)
16 diff
(97.0 %id)
H06753 whole brain .b 7669 to 8034 1 to 367       367/372
(98 %)
4 diff
(99.0 %id)
H14653 whole brain .b 7669 to 8133 1 to 479       479/479
(100 %)
20 diff
(95.9 %id)
DA346458 substantia nigra .b 7697 to 8256 2 to 561   capped   560/560
(100 %)
2 diff
(99.7 %id)
CN421625 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 7706 to 8435 1 to 730       730/730
(100 %)
2 diff
(99.8 %id)
BQ422370 embryonal carcinoma, cell line, testis .b 7727 to 8790 11 to 1072   tiling clone,   1062/1075
(98 %)
53 diff
(95.1 %id)
BU101678   .b 7959 to 8624 1 to 665       665/674
(98 %)
4 diff
(99.5 %id)
DA503349 brain .b 8122 to 8636 2 to 517   capped   516/516
(100 %)
2 diff
(99.7 %id)
W95900 eye, retina .b 8133 to 8624 1 to 495       495/495
(100 %)
3 diff
(99.4 %id)
DA813327   .b 8152 to 8722 2 to 572   capped   571/571
(100 %)
2 diff
(99.7 %id)
AW812854 stomach .b 8187 to 8837 648 to 1       648/678
(95 %)
25 diff
(96.4 %id)
BU101679   .b 8401 to 9078 687 to 11       677/687
(98 %)
0 diff
(100 %id)
DA748349   .b 8433 to 8974 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
BP224958   .b 8555 to 9136 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
AW976071   .b 8633 to 9338 707 to 1     Submitted on the opposite strand 707/716
(98 %)
6 diff
(99.2 %id)
AW991373 breast_normal .b 8671 to 8820 159 to 10     Submitted on the opposite strand 150/167
(89 %)
0 diff
(100 %id)
DA570521 whole embryo, mainly head .b 8709 to 9426 2 to 718   capped   717/719
(99 %)
3 diff
(99.6 %id)
BP276622 Kidney .b 8750 to 9331 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
BM666156 eye, fetal eyes .b 8774 to 9339 584 to 19   AAA Possibly primed on the genome, locally A rich (11/11 A in genome downstream of last aligned base) 566/566
(100 %)
0 diff
(100 %id)
DB351735 uterus .b 8797 to 9339 543 to 1       543/543
(100 %)
0 diff
(100 %id)
BP247930 Kidney .b 8885 to 9469 1 to 586       586/586
(100 %)
3 diff
(99.5 %id)
AA825322 carcinoid, lung .b 8906 to 9245 337 to 1       337/337
(100 %)
3 diff
(99.2 %id)
H06703 whole brain .b 8907 to 9347 446 to 1       446/451
(98 %)
6 diff
(98.7 %id)
CR743806 heart .b 8944 to 9573 1 to 632       632/632
(100 %)
3 diff
(99.6 %id)
W84386 heart .b 8944 to 9156 1 to 213       213/213
(100 %)
4 diff
(98.2 %id)
M85917   .b 8945 to 9304 1 to 362       362/362
(100 %)
5 diff
(98.7 %id)
DA924840 small intestine .b 8949 to 9516 2 to 571   capped   570/570
(100 %)
2 diff
(99.7 %id)
DW431263 Liver .b 8950 to 9202 17 to 269       253/269
(94 %)
6 diff
(97.8 %id)
DW457814 Liver .b 8950 to 9092 17 to 159       143/159
(89 %)
6 diff
(96.3 %id)
R37805 whole brain .b 8958 to 9347 397 to 2       396/399
(99 %)
0 diff
(100 %id)
AA720881 germinal center B cell .b 8964 to 9348 385 to 1       385/385
(100 %)
0 diff
(100 %id)
H14569 whole brain .b 8976 to 9347 382 to 1       382/402
(95 %)
14 diff
(96.6 %id)
Z39280 brain, total brain .b 8995 to 9339 345 to 1       345/345
(100 %)
1 diff
(99.8 %id)
AW269002 pooled .b 9023 to 9339 319 to 1       319/439
(72 %)
4 diff
(99.1 %id)
BP289115 lung .b 9029 to 9611 1 to 581       581/581
(100 %)
5 diff
(99.2 %id)
AA007194 whole brain .b 9034 to 9343 310 to 1       310/310
(100 %)
4 diff
(98.8 %id)
AA020009 eye, retina .b 9062 to 9180 1 to 119       119/119
(100 %)
0 diff
(100 %id)
BQ068027 brain .b 9081 to 10005 17 to 943       927/1038
(89 %)
17 diff
(98.4 %id)
T16736   .b 9114 to 9338 227 to 3       225/227
(99 %)
0 diff
(100 %id)
CB409806 maxilla, pooled .b 9137 to 9715 1 to 579       579/579
(100 %)
7 diff
(98.8 %id)
AA204769   .b 9158 to 9638 1 to 483       483/484
(99 %)
10 diff
(98.0 %id)
AA115923   .b 9184 to 9640 1 to 465       465/467
(99 %)
16 diff
(96.6 %id)
N35284 melanocyte .b 9223 to 9404 1 to 186       186/186
(100 %)
4 diff
(97.9 %id)
AW502066 lymph .b 9232 to 9691 18 to 477       460/477
(96 %)
6 diff
(98.8 %id)
TI_154157401   .b 9232 to 9711 90 to 569       480/490
(97 %)
6 diff
(98.8 %id)
BI754352 brain .b 9262 to 10130 1 to 871       871/948
(91 %)
49 diff
(94.9 %id)
TI_57215801   .b 9262 to 10130 33 to 903       871/980
(88 %)
49 diff
(95.0 %id)
AW628226 pooled .b 9285 to 9752 467 to 1       467/467
(100 %)
1 diff
(99.8 %id)
AI090652 heart .b 9299 to 9753 455 to 1       455/455
(100 %)
0 diff
(100 %id)
AI342559 lung .b 9345 to 9743 54 to 452     Submitted on the opposite strand 399/454
(87 %)
1 diff
(99.8 %id)
AI809394 pooled .b 9345 to 9570 50 to 275     Submitted on the opposite strand 226/275
(82 %)
6 diff
(97.9 %id)
AI690140 carcinoid, lung .b 9378 to 9752 375 to 1       375/375
(100 %)
4 diff
(99.0 %id)
FN083292 breast carcinoma .b 9471 to 9536 1 to 66       66/69
(95 %)
1 diff
(98.6 %id)
W84891 heart .b 9479 to 10016 537 to 1       537/547
(98 %)
4 diff
(99.3 %id)
AA191098   .b 9491 to 9985 1 to 496       496/497
(99 %)
7 diff
(98.6 %id)
AV688897 hepatocellular carcinoma .b 9507 to 9863 1 to 350       350/372
(94 %)
4 diff
(99.0 %id)
AI039315   .b 9616 to 9971 356 to 1       356/356
(100 %)
0 diff
(100 %id)
DN914918   .b 9677 to 10277 1 to 599       599/599
(100 %)
2 diff
(99.7 %id)
DA569264 whole embryo, mainly head .b 9678 to 10505 2 to 829   tiling clone, capped   828/835
(99 %)
9 diff
(99.0 %id)
TI_151766042   .b 9683 to 10284 73 to 685     Possibly primed on the genome, locally A rich (11/11 A in genome downstream of last aligned base) 613/1276
(48 %)
21 diff
(98.4 %id)
BM709231 eye, optic nerve .b 9760 to 10299 1 to 540   fully sequenced,   540/540
(100 %)
7 diff
(98.8 %id)
BM713563 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 9793 to 10190 1 to 398   fully sequenced,   398/398
(100 %)
0 diff
(100 %id)
CD250734 Blood vessels - aorta, basilar and artery .b 9951 to 10557 1 to 612       612/795
(76 %)
11 diff
(98.7 %id)
BE881661 large cell carcinoma, undifferentiated, lung .b 10004 to 10760 1 to 753       753/1065
(70 %)
14 diff
(98.7 %id)
BP289364 lung .b 10054 to 10634 1 to 582       582/582
(100 %)
4 diff
(99.4 %id)
BI039365 nervous_tumor .b 10098 to 10762 1 to 665       665/665
(100 %)
5 diff
(99.3 %id)
AA288018 germinal center B cell .b 10139 to 10582 1 to 438       438/438
(100 %)
8 diff
(98.2 %id)
BI038295 nervous_tumor .b 10148 to 10784 637 to 1       637/637
(100 %)
15 diff
(97.7 %id)
BU581678 Fetal Pancreas (4 Pooled Donors, 18 - 20weeks, Stratagene #738023) .b 10153 to 10776 1 to 624       624/624
(100 %)
0 diff
(100 %id)
BU739588 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 10162 to 10821 677 to 19   fully sequenced, AAA   659/659
(100 %)
2 diff
(99.7 %id)
AA020010 eye, retina .b 10182 to 10822 632 to 1       632/641
(98 %)
26 diff
(96.0 %id)
DN914917   .b 10207 to 10410 212 to 9       204/212
(96 %)
0 diff
(100 %id)
AW340490 pooled .b 10234 to 10825 593 to 1       593/593
(100 %)
1 diff
(99.9 %id)
BU581356 Fetal Pancreas (4 Pooled Donors, 18 - 20weeks, Stratagene #738023) .b 10264 to 10828 566 to 2       565/566
(99 %)
0 diff
(100 %id)
CB409805 maxilla, pooled .b 10267 to 10825 608 to 51       558/564
(98 %)
0 diff
(100 %id)
BU732372 eye, optic nerve .b 10269 to 10824 574 to 19   fully sequenced, AAA   556/556
(100 %)
0 diff
(100 %id)
CA392279.
matches multiple genes
eye, RPE/choroid .b 10270 to 10824 578 to 24   AAA also hits gene doplaw 555/555
(100 %)
1 diff
(99.9 %id)
DB332095 small intestine .b 10294 to 10824 532 to 1       532/533
(99 %)
1 diff
(99.9 %id)
AI670970 pooled germ cell tumors .b 10299 to 10824 526 to 1       526/526
(100 %)
8 diff
(98.5 %id)
DB327603   .b 10301 to 10824 524 to 1       524/524
(100 %)
0 diff
(100 %id)
TI_151745311   .b 10301 to 10904 716 to 108   tiling clone, AAA Possibly primed on the genome, locally A rich (11/11 A in genome downstream of last aligned base) 609/1314
(46 %)
17 diff
(98.8 %id)
DB357295 whole embryo, mainly head .b 10328 to 10821 492 to 1       492/508
(96 %)
3 diff
(99.5 %id)
AW057828 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .b 10348 to 10824 477 to 1       477/477
(100 %)
0 diff
(100 %id)
AW024946 Kidney .b 10349 to 10821 473 to 1       473/473
(100 %)
1 diff
(99.8 %id)
AI949908 2 pooled tumors (clear cell type), Kidney .b 10353 to 10904 567 to 16   AAA Possibly primed on the genome, locally A rich (11/11 A in genome downstream of last aligned base) 552/552
(100 %)
1 diff
(99.9 %id)
AI373658 Kidney .b 10357 to 10828 472 to 1       472/472
(100 %)
0 diff
(100 %id)
AW469631 pooled .b 10357 to 10816 466 to 7       460/466
(98 %)
0 diff
(100 %id)
AI830678 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .b 10366 to 10714 478 to 130   AAA   349/463
(75 %)
0 diff
(100 %id)
AI628470 Kidney .b 10400 to 10823 425 to 2       424/425
(99 %)
0 diff
(100 %id)
AI431961 adenocarcinoma, Pancreas .b 10402 to 10828 431 to 5       427/431
(99 %)
0 diff
(100 %id)
AA513497   .b 10404 to 10821 1 to 418   AAA   418/418
(100 %)
1 diff
(99.8 %id)
AW971289   .b 10405 to 10813 111 to 519       409/519
(78 %)
6 diff
(98.9 %id)
AA527932   .b 10405 to 10823 37 to 455       419/589
(71 %)
2 diff
(99.7 %id)
AA524929   .b 10405 to 10822 8 to 425   AAA   418/425
(98 %)
6 diff
(98.6 %id)
AW301294 Kidney .b 10412 to 10818 409 to 3       407/409
(99 %)
0 diff
(100 %id)
CD677807 eye, Trabecular meshwork .b 10415 to 10665 1 to 251       251/251
(100 %)
1 diff
(99.7 %id)
FN046156 breast carcinoma .b 10426 to 10486 1 to 61       61/62
(98 %)
1 diff
(98.4 %id)
AA232907 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 10428 to 10821 394 to 1       394/394
(100 %)
0 diff
(100 %id)
AW664345 2 pooled high-grade transitional celltumors, genitourinary tract .b 10432 to 10899 471 to 4   tiling clone,   468/471
(99 %)
0 diff
(100 %id)
AI040097   .b 10441 to 10902 466 to 5       462/466
(99 %)
0 diff
(100 %id)
AW264146 brain, three pooled meningiomas .b 10463 to 10896 434 to 1       434/434
(100 %)
0 diff
(100 %id)
AA836508 germinal center B cell .b 10493 to 10824 356 to 26   AAA   331/331
(100 %)
5 diff
(98.5 %id)
T05037   .b 10509 to 10779 272 to 2       271/272
(99 %)
0 diff
(100 %id)
AA115189   .b 10509 to 10894 387 to 1       387/387
(100 %)
3 diff
(99.3 %id)
AY584194   .b 10551 to 10821 6 to 273   AAA   268/273
(98 %)
6 diff
(97.9 %id)
BQ008369 Chondrosarcoma, Left Pelvis .b 10567 to 10824 274 to 16   AAA   259/260
(99 %)
11 diff
(95.8 %id)
AA206887   .b 10638 to 10828 195 to 6       190/196
(96 %)
0 diff
(100 %id)
T63336 lung .b 10690 to 10878 190 to 1       190/190
(100 %)
1 diff
(99.5 %id)
DA135303 alzheimer cortex .c 1 to 551 5 to 553   tiling clone, capped   552/552
(100 %)
1 diff
(99.9 %id)
N39987 melanocyte .c 457 to 790 1 to 333   tiling clone,   333/333
(100 %)
2 diff
(99.4 %id)
CA407241 adipose .c 773 to 1455 1 to 674   tiling clone,   674/702
(96 %)
21 diff
(97.1 %id)
N26881 melanocyte .c 1998 to 2404 407 to 1   tiling clone,   407/407
(100 %)
0 diff
(100 %id)
AF113122 hypothalamus .d 1 to 1270 1 to 1268 exact tiling clone, AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 1268/1268
(100 %)
2 diff
(99.9 %id)
AF161471 blood .d 129 to 1270 1 to 1142 exact AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 1142/1142
(100 %)
7 diff
(99.4 %id)
T56229 fetal spleen, Spleen .d 756 to 1270 525 to 1       525/527
(99 %)
23 diff
(95.7 %id)
AA680384 liver and spleen .d 867 to 1270 406 to 3       404/424
(95 %)
0 diff
(100 %id)
BF515580   .d 1068 to 1587 537 to 18   tiling clone, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 520/520
(100 %)
5 diff
(99.1 %id)
BE646047 B-cell, chronic lymphotic leukemia .d 1103 to 1541 1 to 440   tiling clone, Submitted on the opposite strand 440/440
(100 %)
5 diff
(98.9 %id)
AI270906 borderline ovarian carcinoma, ovary .e 1 to 382 384 to 2 F7L tiling clone,   383/394
(97 %)
1 diff
(99.8 %id)
CR744198 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .e 9 to 382 384 to 9     Submitted on the opposite strand 376/384
(97 %)
1 diff
(99.8 %id)
BX114927 Kidney .f 1 to 395 4 to 396 C25R A28V C29* tiling clone,   396/396
(100 %)
2 diff
(99.5 %id)
AI373747 Kidney .f 228 to 447 221 to 2   tiling clone,   220/221
(99 %)
0 diff
(100 %id)
AY584195   Gene KLF12, variant not shown         This clone was ignored    
AV728478 hypothalamus Gene KLF12, variant not shown         Suspected internal deletion, this clone was ignored    
AV729629 hypothalamus Gene KLF12, variant not shown         Suspected internal deletion, this clone was ignored    
DA947593 Spleen Gene KLF12, variant not shown       capped This clone was ignored    
DB333605 Spleen Gene KLF12, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI