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Gene KIF5CTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
437 supporting clones for gene KIF5C back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AB011103 brain .a 1 to 6280 652 to 6927 exact tiling clone, available from KIAA,   6276/6927
(90 %)
9 diff
(99.9 %id)
BE093611 breast .a 1 to 276 27 to 302       276/302
(91 %)
6 diff
(98.1 %id)
NM_004522.1   .a 1 to 6280 652 to 6927 exact RefSeq,   6276/6927
(90 %)
9 diff
(99.9 %id)
BG683662 brain, neuroblastoma, cell line .a 7 to 675 673 to 1       670/677
(98 %)
5 diff
(99.3 %id)
BC127772 PCR rescued clones .a 8 to 2591 10 to 2593 exact     2584/2593
(99 %)
6 diff
(99.8 %id)
BU070567.
matches multiple genes
insulinoma, Pancreas .a 75 to 762 697 to 12   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS, also hits gene rimomo 686/697
(98 %)
1 diff
(99.9 %id)
BF059313 pooled germ cell tumors .a 129 to 756 627 to 1       627/627
(100 %)
8 diff
(98.8 %id)
BM929856 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 148 to 741 1 to 593       593/593
(100 %)
2 diff
(99.7 %id)
AV747642 Pituitary .a 172 to 710 537 to 1     Submitted on the opposite strand 537/555
(96 %)
17 diff
(97.0 %id)
AI651976 pooled germ cell tumors .a 183 to 753 574 to 3       572/574
(99 %)
3 diff
(99.5 %id)
AI990737 pooled germ cell tumors .a 220 to 761 548 to 7   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 542/554
(97 %)
9 diff
(98.4 %id)
AW274812 pooled germ cell tumors .a 229 to 756 528 to 1       528/528
(100 %)
0 diff
(100 %id)
AA325221 brain, cerebellum .a 230 to 679 1 to 450       450/450
(100 %)
0 diff
(100 %id)
T82293   .a 246 to 761 517 to 5       515/526
(97 %)
21 diff
(96.1 %id)
BG179733 adenocarcinoma, cell line, Prostate .a 302 to 1079 1 to 782       782/984
(79 %)
20 diff
(98.0 %id)
AI673309 pooled germ cell tumors .a 304 to 756 451 to 1       451/451
(100 %)
4 diff
(99.2 %id)
AW614011 pooled germ cell tumors .a 304 to 756 454 to 1       454/455
(99 %)
1 diff
(99.8 %id)
AI825446 pooled germ cell tumors .a 311 to 756 448 to 1       448/448
(100 %)
9 diff
(98.0 %id)
AV748126 Pituitary .a 318 to 764 453 to 13     Submitted on the opposite strand 441/453
(97 %)
7 diff
(98.5 %id)
BF954490 nervous_normal .a 406 to 966 1 to 559       559/559
(100 %)
8 diff
(98.6 %id)
AI699538 pooled germ cell tumors .a 436 to 756 327 to 1       325/327
(99 %)
23 diff
(93.0 %id)
BI035715 nervous_normal .a 540 to 1020 18 to 496       479/496
(96 %)
6 diff
(98.8 %id)
BQ340156 nervous_normal .a 540 to 1020 18 to 496       479/496
(96 %)
6 diff
(98.8 %id)
BY797369 eye .a 572 to 1166 1 to 595       595/595
(100 %)
1 diff
(99.9 %id)
DA068955 cerebellum .a 670 to 1235 2 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
BE378554 endometrium, adenocarcinoma cell line, uterus .a 676 to 1433 1 to 761       761/881
(86 %)
5 diff
(99.5 %id)
BG004183 placenta_normal .a 686 to 1218 33 to 563       531/563
(94 %)
8 diff
(98.6 %id)
BP349439 brain .a 720 to 1301 1 to 582       582/582
(100 %)
0 diff
(100 %id)
AF010146   .a 796 to 1465 18 to 687       670/694
(96 %)
7 diff
(99.0 %id)
AL046486 testis .a 984 to 1613 1 to 630       630/630
(100 %)
2 diff
(99.7 %id)
BF090290 nervous_normal .a 1100 to 1404 202 to 508       307/508
(60 %)
6 diff
(98.9 %id)
BG004193 placenta_normal .a 1125 to 1666 553 to 14       540/553
(97 %)
2 diff
(99.7 %id)
T06093   .a 1194 to 1547 1 to 360       360/360
(100 %)
7 diff
(98.1 %id)
BQ375107 testis_normal .a 1195 to 1587 1 to 399       395/399
(98 %)
18 diff
(95.5 %id)
CD580200 brain .a 1216 to 2046 1 to 826       826/831
(99 %)
16 diff
(98.1 %id)
BP312337 brain .a 1323 to 1906 1 to 583       583/583
(100 %)
7 diff
(98.8 %id)
BQ365935 placenta_normal .a 1339 to 1671 1 to 335       335/348
(96 %)
9 diff
(97.5 %id)
BF987919 placenta_normal .a 1341 to 1669 342 to 14       329/342
(96 %)
1 diff
(99.8 %id)
CN284581 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 1380 to 1819 1 to 440       440/440
(100 %)
2 diff
(99.6 %id)
BU185691 ductal carcinoma, cell line, Pancreas .a 1414 to 2265 1 to 861       861/902
(95 %)
19 diff
(97.9 %id)
BQ345641 nervous_tumor .a 1434 to 1606 174 to 3       172/187
(91 %)
0 diff
(100 %id)
AL119071 amygdala .a 1578 to 1837 1 to 260       260/260
(100 %)
0 diff
(100 %id)
BE701008 nervous_normal .a 1737 to 2139 1 to 403       403/403
(100 %)
1 diff
(99.8 %id)
BX463823 brain, fetal brain .a 1772 to 2671 11 to 908       898/918
(97 %)
8 diff
(99.2 %id)
DB478291 hippocampus .a 2167 to 2654 1 to 486       486/486
(100 %)
5 diff
(99.0 %id)
AA580023 Prostate .a 2230 to 2656 1 to 427       427/427
(100 %)
10 diff
(97.7 %id)
AL117393 Kidney .a 2247 to 6279 1 to 4025   available from DKFZ, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 4025/4026
(99 %)
16 diff
(99.7 %id)
BX418748 brain, fetal brain .a 2282 to 2843 521 to 1073       553/794
(69 %)
33 diff
(95.9 %id)
AV728962 hypothalamus .a 2347 to 3030 1 to 676       676/689
(98 %)
37 diff
(94.7 %id)
AW298309   .a 2376 to 2718 358 to 16   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 343/343
(100 %)
0 diff
(100 %id)
DA500588 brain .a 2469 to 3037 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
BX431512 brain, fetal brain .a 2538 to 3521 1 to 982       982/986
(99 %)
50 diff
(95.0 %id)
BX431511 brain, fetal brain .a 2539 to 3507 1 to 964       964/977
(98 %)
52 diff
(94.7 %id)
DA229910 brain .a 2544 to 3110 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA402640 thalamus .a 2570 to 3131 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA249042 brain .a 2574 to 3162 2 to 589   capped   588/588
(100 %)
1 diff
(99.9 %id)
DB167725 kidney, tumor tissue .a 2576 to 3130 2 to 558   capped   557/557
(100 %)
2 diff
(99.7 %id)
DA187378 amygdala .a 2578 to 3110 2 to 534   capped   533/533
(100 %)
0 diff
(100 %id)
DA127989 cerebellum .a 2590 to 3170 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA213354 brain .a 2592 to 3049 2 to 458   capped   457/457
(100 %)
6 diff
(98.7 %id)
DA323964 hippocampus .a 2593 to 3153 2 to 563   capped   562/562
(100 %)
5 diff
(99.2 %id)
DA237534 brain .a 2594 to 3069 2 to 477   capped   476/476
(100 %)
0 diff
(100 %id)
DA234813 brain .a 2595 to 3191 2 to 598   capped   597/597
(100 %)
0 diff
(100 %id)
DA804244 brain .a 2595 to 3134 2 to 542   capped   541/541
(100 %)
4 diff
(99.3 %id)
DA231727 brain .a 2599 to 3150 15 to 567   capped   553/566
(97 %)
6 diff
(99.0 %id)
DA334998 hippocampus .a 2599 to 2869 10 to 280   capped   271/279
(97 %)
6 diff
(97.9 %id)
AU132547   .a 2599 to 3386 12 to 798   capped Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 787/800
(98 %)
9 diff
(98.9 %id)
DA742052   .a 2599 to 3130 14 to 546   capped   533/545
(97 %)
6 diff
(98.9 %id)
DA234419 brain .a 2600 to 3183 2 to 586   capped   585/585
(100 %)
1 diff
(99.9 %id)
DA806347 brain .a 2601 to 3176 2 to 576   capped   575/575
(100 %)
2 diff
(99.7 %id)
DA243982 brain .a 2607 to 3198 2 to 592   capped   591/591
(100 %)
2 diff
(99.7 %id)
DA495688 brain .a 2629 to 3196 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA408143 thalamus .a 2633 to 3171 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
DA110198 cerebellum .a 2644 to 3206 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA108776 cerebellum .a 2651 to 3217 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
TI_151707200   .a 2667 to 3210 75 to 609     Submitted on the opposite strand 535/1033
(51 %)
25 diff
(97.6 %id)
DA196223 amygdala .a 2673 to 2919 52 to 298   capped   247/297
(83 %)
6 diff
(98.0 %id)
BM668701 eye, Retina Foveal and Macular .a 2673 to 3322 1 to 650     Submitted on the opposite strand 650/650
(100 %)
3 diff
(99.6 %id)
DA244104 brain .a 2674 to 3271 2 to 600   capped   599/599
(100 %)
1 diff
(99.9 %id)
DA183618 amygdala .a 2677 to 3232 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DA323210 hippocampus .a 2677 to 3234 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DA109630 cerebellum .a 2679 to 3209 2 to 532   capped   531/531
(100 %)
0 diff
(100 %id)
DA247583 brain .a 2681 to 3270 2 to 589   capped   588/589
(99 %)
3 diff
(99.5 %id)
DA412727 thalamus .a 2685 to 3247 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA504553 brain .a 2687 to 3267 2 to 583   capped   582/582
(100 %)
1 diff
(99.9 %id)
DA126152 cerebellum .a 2720 to 3321 2 to 604   capped   603/603
(100 %)
1 diff
(99.9 %id)
DA802371 brain .a 2735 to 3297 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA100880 cerebellum .a 2743 to 3200 2 to 459   capped   458/458
(100 %)
0 diff
(100 %id)
DA238867 brain .a 2790 to 3380 2 to 592   capped   591/591
(100 %)
2 diff
(99.7 %id)
DA755413   .a 2794 to 3342 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
DA800120 brain .a 2824 to 3370 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA125128 cerebellum .a 2830 to 3376 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA113692 cerebellum .a 2874 to 3430 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
AA332807 Embryo, 8 weeks .a 2935 to 3195 1 to 261       261/263
(99 %)
3 diff
(98.9 %id)
AL050070 Kidney .a 2945 to 6280 1 to 3332   available from DKFZ, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 3332/3332
(100 %)
4 diff
(99.9 %id)
DA291942 hippocampus .a 2991 to 3558 13 to 581   capped   569/580
(98 %)
6 diff
(99.0 %id)
BM693423 eye, Retina Foveal and Macular .a 3001 to 3512 518 to 7     Submitted on the opposite strand 512/518
(98 %)
0 diff
(100 %id)
DA721349   .a 3033 to 3565 2 to 535   capped   534/534
(100 %)
1 diff
(99.9 %id)
DA405070 thalamus .a 3050 to 3506 2 to 458   capped   457/457
(100 %)
1 diff
(99.8 %id)
DA503390 brain .a 3054 to 3625 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DA396528 thalamus .a 3072 to 3668 2 to 598   capped   597/597
(100 %)
1 diff
(99.9 %id)
DA210164 brain .a 3088 to 3640 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA505070 brain .a 3098 to 3646 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA798218 brain .a 3098 to 3645 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DA809674 brain .a 3098 to 3644 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
AV723274 hypothalamus .a 3104 to 3809 1 to 691       691/705
(98 %)
13 diff
(98.2 %id)
DB150964 thymus .a 3123 to 3603 2 to 482   capped   481/482
(99 %)
2 diff
(99.6 %id)
DA405331 thalamus .a 3152 to 3664 2 to 515   capped   514/514
(100 %)
1 diff
(99.9 %id)
DA190580 amygdala .a 3153 to 3726 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA388368 thalamus .a 3155 to 3746 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
DA155965 amygdala .a 3160 to 3675 2 to 518   capped   517/517
(100 %)
1 diff
(99.9 %id)
DA075291 cerebellum .a 3163 to 3732 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA501516 brain .a 3165 to 3736 2 to 571   capped   570/570
(100 %)
2 diff
(99.7 %id)
DA796899 brain .a 3165 to 3720 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA691538   .a 3169 to 3736 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA696406   .a 3169 to 3742 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA158856 amygdala .a 3174 to 3682 2 to 511   capped   510/510
(100 %)
1 diff
(99.9 %id)
DA526510 brain .a 3190 to 3762 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA493834 brain .a 3212 to 3774 2 to 567   capped   566/566
(100 %)
5 diff
(99.2 %id)
DA711924   .a 3273 to 3842 2 to 571   capped   570/571
(99 %)
1 diff
(99.9 %id)
DA179574 amygdala .a 3279 to 3841 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DA532881 brain .a 3302 to 3878 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
CN284578 embryonic stem cells, cell lines H1, H7, andH9 .a 3329 to 4064 1 to 737       737/739
(99 %)
3 diff
(99.6 %id)
DA149515 amygdala .a 3345 to 3919 2 to 576   capped   575/577
(99 %)
1 diff
(99.9 %id)
DA794803 brain .a 3353 to 3928 2 to 578   capped   577/577
(100 %)
2 diff
(99.7 %id)
DB176061 kidney, tumor tissue .a 3408 to 3986 2 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
DA530456 brain .a 3562 to 4074 2 to 514   capped   513/513
(100 %)
1 diff
(99.9 %id)
DA175464 amygdala .a 3563 to 4139 2 to 570   capped   569/569
(100 %)
4 diff
(99.3 %id)
DA517614 brain .a 3564 to 4055 2 to 493   capped   492/492
(100 %)
0 diff
(100 %id)
DA782354 brain .a 3564 to 4094 2 to 532   capped   531/531
(100 %)
0 diff
(100 %id)
DA818897   .a 3609 to 4168 2 to 557   capped   556/556
(100 %)
2 diff
(99.7 %id)
DA531453 brain .a 3613 to 4239 2 to 625   capped   624/624
(100 %)
6 diff
(99.1 %id)
AU131582   .a 3649 to 4333 2 to 680   capped   679/679
(100 %)
4 diff
(99.5 %id)
F11613 brain, total brain .a 3673 to 3992 1 to 320       320/320
(100 %)
0 diff
(100 %id)
DA068670 cerebellum .a 3679 to 4179 2 to 500   capped   499/499
(100 %)
4 diff
(99.2 %id)
DA135437 alzheimer cortex .a 3720 to 4351 2 to 629   capped   628/628
(100 %)
2 diff
(99.7 %id)
DA531636 brain .a 3721 to 4245 2 to 523   capped   522/522
(100 %)
7 diff
(98.7 %id)
DA531362 brain .a 3728 to 4218 2 to 488   capped   487/487
(100 %)
2 diff
(99.6 %id)
DA698530   .a 3729 to 4241 2 to 510   capped   509/509
(100 %)
2 diff
(99.7 %id)
DB172738 kidney, tumor tissue .a 3729 to 4320 2 to 589   capped   588/588
(100 %)
2 diff
(99.7 %id)
DA734278   .a 3746 to 4209 2 to 460   capped   459/462
(99 %)
4 diff
(99.2 %id)
DA521639 brain .a 3747 to 4308 2 to 559   capped   558/558
(100 %)
2 diff
(99.7 %id)
DB170961 kidney, tumor tissue .a 3750 to 4269 2 to 519   capped   518/518
(100 %)
2 diff
(99.7 %id)
DA484820 brain .a 3761 to 4292 2 to 527   capped   526/526
(100 %)
3 diff
(99.5 %id)
DA258569 caudate nucleus .a 3765 to 4283 2 to 518   capped   517/517
(100 %)
1 diff
(99.9 %id)
DA501487 brain .a 3770 to 4292 2 to 524   capped   523/523
(100 %)
0 diff
(100 %id)
DA199565 brain .a 3773 to 4365 2 to 590   capped   589/589
(100 %)
2 diff
(99.7 %id)
DA301450 hippocampus .a 3774 to 4329 2 to 553   capped   552/552
(100 %)
2 diff
(99.7 %id)
DA301468 hippocampus .a 3774 to 4334 2 to 558   capped   557/557
(100 %)
2 diff
(99.7 %id)
DA085551 cerebellum .a 3803 to 4374 2 to 570   capped   569/569
(100 %)
3 diff
(99.5 %id)
CK002281 brain/CNS, Bulk tissue from Human Spinal cord .a 3823 to 4075 1 to 253       253/253
(100 %)
0 diff
(100 %id)
BP250161 hippocampus .a 3827 to 4423 1 to 589       589/589
(100 %)
9 diff
(98.5 %id)
BQ898152 dorsal root ganglia .a 3845 to 4742 1 to 907       907/935
(97 %)
6 diff
(99.4 %id)
DA618566   .a 3851 to 4438 2 to 586   capped   585/585
(100 %)
3 diff
(99.5 %id)
DA200064 brain .a 3856 to 4412 2 to 555   capped   554/554
(100 %)
3 diff
(99.5 %id)
DA486305 brain .a 3871 to 4448 2 to 574   capped   573/573
(100 %)
4 diff
(99.4 %id)
DB166721 kidney, tumor tissue .a 3872 to 4434 2 to 560   capped   559/559
(100 %)
3 diff
(99.5 %id)
DA769493 brain .a 3874 to 4464 2 to 587   capped   586/586
(100 %)
4 diff
(99.4 %id)
DA146521 amygdala .a 3882 to 4390 2 to 505   capped   504/504
(100 %)
4 diff
(99.3 %id)
DA154340 amygdala .a 3892 to 4470 2 to 576   capped   575/575
(100 %)
2 diff
(99.7 %id)
DA179149 amygdala .a 3895 to 4455 2 to 558   capped   557/557
(100 %)
2 diff
(99.7 %id)
BY796191 eye .a 3896 to 4484 1 to 585       585/585
(100 %)
2 diff
(99.7 %id)
DA305711 hippocampus .a 3910 to 4458 2 to 549   capped   548/548
(100 %)
2 diff
(99.7 %id)
DA503780 brain .a 3910 to 4460 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
DA147557 amygdala .a 3916 to 4486 2 to 568   capped   567/567
(100 %)
2 diff
(99.7 %id)
BP421154 small intestine .a 3950 to 4425 1 to 477     Submitted on the opposite strand 477/477
(100 %)
14 diff
(97.1 %id)
DA086054 cerebellum .a 3967 to 4504 2 to 536   capped   535/535
(100 %)
3 diff
(99.5 %id)
CN284579 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 3968 to 4443 1 to 473       473/473
(100 %)
3 diff
(99.4 %id)
DA774406 brain .a 3969 to 4548 2 to 573   capped   572/572
(100 %)
5 diff
(99.2 %id)
DA094993 cerebellum .a 3972 to 4543 2 to 567   capped   566/566
(100 %)
3 diff
(99.5 %id)
DA139629 alzheimer cortex .a 3974 to 4540 2 to 562   capped   561/561
(100 %)
3 diff
(99.5 %id)
DA061598 cerebellum .a 3980 to 4504 2 to 522   capped   521/521
(100 %)
2 diff
(99.7 %id)
DA179093 amygdala .a 3981 to 4565 2 to 578   capped   577/577
(100 %)
7 diff
(98.8 %id)
M79073   .a 3987 to 4380 1 to 394       394/394
(100 %)
9 diff
(97.8 %id)
DA264686 caudate nucleus .a 4066 to 4633 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA688082   .a 4066 to 4609 2 to 546   tiling clone, capped   545/545
(100 %)
3 diff
(99.5 %id)
DA360764 subthalamic nucleus .a 4080 to 4613 2 to 535   capped   534/534
(100 %)
0 diff
(100 %id)
DA685322   .a 4087 to 4636 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA500675 brain .a 4088 to 4655 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
BQ187438 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 4089 to 4832 1 to 744       744/744
(100 %)
0 diff
(100 %id)
AA081545   .a 4090 to 4428 1 to 341       341/341
(100 %)
2 diff
(99.5 %id)
DA683537   .a 4096 to 4628 2 to 534   capped   533/533
(100 %)
1 diff
(99.9 %id)
DB177400 kidney, tumor tissue .a 4101 to 4641 2 to 544   capped   543/543
(100 %)
2 diff
(99.7 %id)
DA068528 cerebellum .a 4111 to 4680 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA082632 cerebellum .a 4124 to 4690 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA139656 alzheimer cortex .a 4171 to 4742 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA054324 cerebellum .a 4172 to 4724 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA168289 amygdala .a 4173 to 4694 2 to 524   capped   523/523
(100 %)
2 diff
(99.7 %id)
DA141194 alzheimer cortex .a 4176 to 4743 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA488056 brain .a 4176 to 4744 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DA055777 cerebellum .a 4179 to 4730 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA065250 cerebellum .a 4179 to 4742 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DB168907 kidney, tumor tissue .a 4179 to 4751 2 to 573   capped   572/572
(100 %)
4 diff
(99.4 %id)
DA282932 corpus callosum .a 4183 to 4740 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DA090513 cerebellum .a 4188 to 4763 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
FN121154 breast carcinoma .a 4191 to 4314 123 to 1     Submitted on the opposite strand 123/125
(98 %)
3 diff
(97.6 %id)
DA083211 cerebellum .a 4200 to 4776 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
DA069290 cerebellum .a 4202 to 4771 2 to 572   capped   571/571
(100 %)
2 diff
(99.7 %id)
DA365422 subthalamic nucleus .a 4205 to 4777 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DA149117 amygdala .a 4207 to 4775 2 to 573   capped   572/574
(99 %)
5 diff
(99.2 %id)
DA697515   .a 4216 to 4775 2 to 564   capped   563/565
(99 %)
5 diff
(99.2 %id)
DA070851 cerebellum .a 4251 to 4790 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DA360075 subthalamic nucleus .a 4265 to 4834 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DA364069 subthalamic nucleus .a 4270 to 4835 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA502747 brain .a 4272 to 4832 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA132044 alzheimer cortex .a 4291 to 4856 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
BP250885 hippocampus .a 4294 to 4877 1 to 584       584/584
(100 %)
1 diff
(99.9 %id)
BX441551 brain, fetal brain .a 4299 to 5256 1 to 958   tiling clone,   958/958
(100 %)
0 diff
(100 %id)
DA071098 cerebellum .a 4312 to 4888 2 to 579   capped   578/578
(100 %)
2 diff
(99.7 %id)
DA073036 cerebellum .a 4316 to 4892 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DB167916 kidney, tumor tissue .a 4328 to 4898 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DB174419 kidney, tumor tissue .a 4328 to 4895 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA690084   .a 4338 to 4879 2 to 543   capped   542/542
(100 %)
1 diff
(99.9 %id)
DA143719 amygdala .a 4355 to 4914 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DA201776 brain .a 4356 to 4959 2 to 605   capped   604/604
(100 %)
1 diff
(99.9 %id)
DA344819 substantia nigra .a 4358 to 4870 2 to 514   capped   513/513
(100 %)
1 diff
(99.9 %id)
DA208373 brain .a 4369 to 4922 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DA263272 caudate nucleus .a 4382 to 4963 2 to 584   capped   583/583
(100 %)
2 diff
(99.7 %id)
T31178 brain .a 4392 to 4771 1 to 380       380/381
(99 %)
1 diff
(99.8 %id)
DA359359 subthalamic nucleus .a 4397 to 4953 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
T08358   .a 4416 to 4823 1 to 409       409/409
(100 %)
2 diff
(99.6 %id)
DA068118 cerebellum .a 4434 to 5008 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
BP307822 brain .a 4435 to 5028 1 to 594       594/594
(100 %)
2 diff
(99.7 %id)
AA204758   .a 4438 to 4827 1 to 390       390/391
(99 %)
1 diff
(99.8 %id)
DA291563 hippocampus .a 4440 to 4959 40 to 559   capped   520/558
(93 %)
6 diff
(99.0 %id)
FN087956 breast carcinoma .a 4508 to 4598 1 to 90       90/91
(98 %)
7 diff
(92.4 %id)
DA131773 alzheimer cortex .a 4541 to 5082 2 to 544   capped   543/543
(100 %)
1 diff
(99.9 %id)
FN163105 breast carcinoma .a 4580 to 4701 122 to 1     Submitted on the opposite strand 122/122
(100 %)
2 diff
(98.4 %id)
DA074983 cerebellum .a 4585 to 5164 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA063565 cerebellum .a 4601 to 5172 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
BF962019 nervous_normal .a 4620 to 5034 413 to 2       412/413
(99 %)
0 diff
(100 %id)
DA132118 alzheimer cortex .a 4624 to 5183 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA358019 subthalamic nucleus .a 4627 to 5200 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
R15408 whole brain .a 4628 to 5073 1 to 456       456/485
(94 %)
17 diff
(96.5 %id)
DA356307 subthalamic nucleus .a 4652 to 4973 2 to 324   capped   323/323
(100 %)
1 diff
(99.7 %id)
AV725398 hypothalamus .a 4664 to 5045 1 to 380       380/383
(99 %)
7 diff
(98.2 %id)
AA525065   .a 4687 to 4951 286 to 21       266/286
(93 %)
6 diff
(98.0 %id)
FN094317 breast carcinoma .a 4733 to 4831 101 to 1     Submitted on the opposite strand 101/101
(100 %)
2 diff
(98.1 %id)
FN157107 breast carcinoma .a 4765 to 4862 99 to 1     Submitted on the opposite strand 99/100
(99 %)
1 diff
(99.0 %id)
BG501424 adenocarcinoma, Prostate .a 4775 to 5281 1 to 507       507/507
(100 %)
0 diff
(100 %id)
M86011   .a 4839 to 4983 1 to 145       145/281
(51 %)
1 diff
(99.7 %id)
BG180228 adenocarcinoma, cell line, Prostate .a 4850 to 5566 1 to 717       717/717
(100 %)
7 diff
(99.1 %id)
FN063487 breast carcinoma .a 4877 to 4956 9 to 90       82/90
(91 %)
6 diff
(93.4 %id)
CR612604 fetal brain .a 4889 to 6263 1 to 1375       1375/1375
(100 %)
0 diff
(100 %id)
AL540061 brain, fetal brain .a 4889 to 5729 1 to 841       841/841
(100 %)
0 diff
(100 %id)
BX464137 brain, fetal brain .a 4889 to 5618 1 to 731       731/975
(74 %)
9 diff
(99.1 %id)
FN099073 breast carcinoma .a 4915 to 5012 104 to 6     Submitted on the opposite strand 99/104
(95 %)
0 diff
(100 %id)
AA226736 brain, neuroepithelial cells .a 4917 to 5272 1 to 356       356/356
(100 %)
0 diff
(100 %id)
FN131391 breast carcinoma .a 4939 to 5009 1 to 71       71/72
(98 %)
1 diff
(98.7 %id)
CD557352 testis .a 4961 to 5766 1 to 809       809/869
(93 %)
17 diff
(98.1 %id)
DT216551 brain .a 4972 to 5613 1 to 641       641/641
(100 %)
3 diff
(99.6 %id)
BF196739 brain, glioblastoma (pooled) .a 4987 to 5520 534 to 1       534/538
(99 %)
0 diff
(100 %id)
CA774922 Pancreas, Purified pancreatic islet .a 4994 to 5619 1 to 625       625/625
(100 %)
6 diff
(99.1 %id)
DA117318 cerebellum .a 5028 to 5599 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
AW995415 breast_normal .a 5031 to 5467 8 to 444       437/444
(98 %)
6 diff
(98.7 %id)
AU154058   .a 5065 to 5619 565 to 12   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 554/554
(100 %)
9 diff
(98.4 %id)
AI698127 carcinoid, lung .a 5070 to 5624 556 to 2       555/556
(99 %)
0 diff
(100 %id)
DA607820   .a 5070 to 5687 2 to 619   capped   618/618
(100 %)
0 diff
(100 %id)
M62096   .a 5084 to 5442 1 to 360       360/360
(100 %)
9 diff
(97.5 %id)
BX281762 brain, hippocampus (see description) .a 5114 to 5580 28 to 494       467/494
(94 %)
6 diff
(98.8 %id)
BI041362 nervous_tumor .a 5140 to 5438 1 to 300       300/300
(100 %)
6 diff
(98.0 %id)
BE670985 carcinoid, lung .a 5149 to 5629 1 to 481     Submitted on the opposite strand 481/481
(100 %)
2 diff
(99.6 %id)
BE671161 carcinoid, lung .a 5149 to 5619 1 to 471     Submitted on the opposite strand 471/471
(100 %)
1 diff
(99.8 %id)
DA491721 brain .a 5150 to 5642 2 to 492   capped   491/527
(93 %)
6 diff
(98.9 %id)
DT218900 brain .a 5151 to 5798 1 to 648       648/648
(100 %)
0 diff
(100 %id)
DB546935 hippocampus .a 5159 to 5615 1 to 457     Submitted on the opposite strand 457/457
(100 %)
0 diff
(100 %id)
BF364963 nervous_normal .a 5163 to 5353 14 to 200       187/200
(93 %)
11 diff
(94.5 %id)
BF364976 nervous_normal .a 5163 to 5618 13 to 467       455/467
(97 %)
6 diff
(98.8 %id)
AA541529 metastatic prostate bone lesion .a 5164 to 5511 1 to 345       345/352
(98 %)
7 diff
(98.1 %id)
AI301724 carcinoid, lung .a 5205 to 5624 421 to 2       420/422
(99 %)
0 diff
(100 %id)
BF364945 nervous_normal .a 5207 to 5650 443 to 2       442/443
(99 %)
0 diff
(100 %id)
AI206957 pooled germ cell tumors .a 5207 to 5619 426 to 14   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 413/413
(100 %)
1 diff
(99.8 %id)
BQ338733 nervous_normal .a 5224 to 5598 374 to 1       374/374
(100 %)
19 diff
(95.0 %id)
FN128222 breast carcinoma .a 5225 to 5317 94 to 4     Submitted on the opposite strand 91/97
(93 %)
0 diff
(100 %id)
FN113893 breast carcinoma .a 5240 to 5346 1 to 107       107/107
(100 %)
1 diff
(99.1 %id)
T31267 brain .a 5243 to 5709 1 to 472       472/476
(99 %)
7 diff
(98.6 %id)
FN074351 breast carcinoma .a 5292 to 5386 1 to 92       92/92
(100 %)
3 diff
(96.8 %id)
BX463822 brain, fetal brain .a 5295 to 6241 955 to 10       946/955
(99 %)
0 diff
(100 %id)
BX445154 brain, fetal brain .a 5305 to 6226 917 to 1       917/927
(98 %)
12 diff
(98.8 %id)
FN115433 breast carcinoma .a 5318 to 5391 1 to 74       74/74
(100 %)
4 diff
(94.6 %id)
F09268 brain, total brain .a 5332 to 5618 287 to 1       287/287
(100 %)
0 diff
(100 %id)
FN171246 breast carcinoma .a 5346 to 5449 106 to 3     Submitted on the opposite strand 104/106
(98 %)
0 diff
(100 %id)
FN075900 breast carcinoma .a 5365 to 5479 114 to 1     Submitted on the opposite strand 114/114
(100 %)
1 diff
(99.2 %id)
AA082009   .a 5365 to 5618 258 to 1       258/258
(100 %)
4 diff
(98.5 %id)
AW901551 nervous_normal .a 5371 to 5872 499 to 2       498/499
(99 %)
0 diff
(100 %id)
AW901553 nervous_normal .a 5371 to 5871 505 to 3       503/505
(99 %)
0 diff
(100 %id)
BF363887 nervous_normal .a 5371 to 5830 460 to 1       460/460
(100 %)
22 diff
(95.3 %id)
AL568201 brain, fetal brain .a 5376 to 6263 887 to 1       887/887
(100 %)
17 diff
(98.1 %id)
CF455088 peripheral nervous system .a 5381 to 6215 26 to 857   AAA   832/903
(92 %)
13 diff
(98.6 %id)
FN150746 breast carcinoma .a 5384 to 5493 1 to 107       107/110
(97 %)
8 diff
(92.8 %id)
BX455250 brain, fetal brain .a 5388 to 6276 890 to 1       890/893
(99 %)
7 diff
(99.3 %id)
BX435629 brain, fetal brain .a 5399 to 6277 878 to 1       878/878
(100 %)
13 diff
(98.6 %id)
BG150047 carcinoid, lung .a 5418 to 5624 212 to 6       207/212
(97 %)
0 diff
(100 %id)
FN091850 breast carcinoma .a 5443 to 5557 1 to 114       114/114
(100 %)
3 diff
(97.4 %id)
CA392204 eye, RPE/choroid .a 5466 to 5926 1 to 461       461/461
(100 %)
0 diff
(100 %id)
FN163181 breast carcinoma .a 5486 to 5606 121 to 1     Submitted on the opposite strand 121/121
(100 %)
0 diff
(100 %id)
FN153416 breast carcinoma .a 5488 to 5610 118 to 1     Submitted on the opposite strand 118/119
(99 %)
8 diff
(93.3 %id)
AA625394 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 5489 to 6127 1 to 639       639/639
(100 %)
1 diff
(99.9 %id)
AW901566 nervous_normal .a 5493 to 6052 576 to 13       564/576
(97 %)
0 diff
(100 %id)
FN144208 breast carcinoma .a 5516 to 5633 1 to 121       121/122
(99 %)
4 diff
(96.8 %id)
TI_153949374   .a 5538 to 6022 79 to 563       485/495
(97 %)
1 diff
(99.8 %id)
FN071144 breast carcinoma .a 5544 to 5629 1 to 88       88/89
(98 %)
3 diff
(96.7 %id)
BX451658 brain, fetal brain .a 5573 to 6280 1 to 708       708/708
(100 %)
3 diff
(99.6 %id)
AA319264 adrenal gland .a 5584 to 5775 1 to 192       192/192
(100 %)
0 diff
(100 %id)
CK818881 Islets of Langerhans, Pancreas .a 5601 to 6180 1 to 580       580/580
(100 %)
0 diff
(100 %id)
BM126859 Islets of Langerhans, Pancreas .a 5617 to 6169 1 to 553       553/553
(100 %)
0 diff
(100 %id)
BM126289 Islets of Langerhans, Pancreas .a 5617 to 6167 1 to 551       551/551
(100 %)
1 diff
(99.9 %id)
FN086485 breast carcinoma .a 5628 to 5683 1 to 56       56/57
(98 %)
1 diff
(98.3 %id)
AW901574 nervous_normal .a 5635 to 6040 407 to 3       405/407
(99 %)
0 diff
(100 %id)
AI369327 anaplastic oligodendroglioma, brain .a 5645 to 6121 1 to 477     Submitted on the opposite strand 477/477
(100 %)
2 diff
(99.6 %id)
AI366377 brain, hippocampus (see description) .a 5647 to 5988 362 to 21       342/362
(94 %)
0 diff
(100 %id)
BF926599 nervous_tumor .a 5649 to 6159 513 to 3     Submitted on the opposite strand 511/513
(99 %)
0 diff
(100 %id)
AW901577 nervous_normal .a 5651 to 6078 1 to 425       425/426
(99 %)
14 diff
(96.8 %id)
AW901576 nervous_normal .a 5653 to 6078 1 to 425       425/426
(99 %)
6 diff
(98.6 %id)
AW901564 nervous_normal .a 5654 to 6078 1 to 422       422/423
(99 %)
13 diff
(97.0 %id)
AW901578 nervous_normal .a 5655 to 6078 1 to 420       420/421
(99 %)
13 diff
(97.0 %id)
AI268343 carcinoid, lung .a 5658 to 6162 1 to 505     Submitted on the opposite strand 505/505
(100 %)
2 diff
(99.7 %id)
BE701877 nervous_normal .a 5666 to 6078 1 to 412       412/413
(99 %)
12 diff
(97.1 %id)
AA878238 carcinoid, lung .a 5666 to 6278 613 to 1       613/613
(100 %)
0 diff
(100 %id)
AW901575 nervous_normal .a 5671 to 6078 1 to 408       408/409
(99 %)
10 diff
(97.6 %id)
AW901554 nervous_normal .a 5686 to 6009 329 to 4       326/329
(99 %)
0 diff
(100 %id)
BE701895 nervous_normal .a 5686 to 6078 1 to 395       395/396
(99 %)
13 diff
(96.8 %id)
BE701880 nervous_normal .a 5704 to 6076 1 to 372       372/372
(100 %)
21 diff
(94.4 %id)
DB366330   .a 5704 to 6280 576 to 1       576/586
(98 %)
16 diff
(97.3 %id)
AI810179 pooled .a 5711 to 6280 573 to 4       570/573
(99 %)
0 diff
(100 %id)
FN120233 breast carcinoma .a 5713 to 5821 1 to 109       109/109
(100 %)
1 diff
(99.1 %id)
BE701888 nervous_normal .a 5716 to 6078 10 to 370       361/371
(97 %)
22 diff
(94.1 %id)
BE701890 nervous_normal .a 5717 to 6076 1 to 356       356/356
(100 %)
20 diff
(94.4 %id)
BX113455 whole brain .a 5738 to 6278 554 to 15   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 540/540
(100 %)
2 diff
(99.7 %id)
AA769070 germinal center B cell .a 5738 to 6280 565 to 23   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 543/543
(100 %)
1 diff
(99.9 %id)
AU153299   .a 5746 to 6280 536 to 1       536/544
(98 %)
14 diff
(97.5 %id)
FN141142 breast carcinoma .a 5750 to 5861 114 to 1     Submitted on the opposite strand 114/114
(100 %)
2 diff
(98.3 %id)
BF432357 brain, glioblastoma (pooled) .a 5751 to 6280 530 to 1       530/530
(100 %)
0 diff
(100 %id)
FN173592 breast carcinoma .a 5774 to 5876 1 to 100       100/105
(95 %)
8 diff
(92.4 %id)
BP219763 caudate nucleus .a 5777 to 6217 1 to 442       442/447
(98 %)
4 diff
(99.2 %id)
FN086243 breast carcinoma .a 5784 to 5884 102 to 4     Submitted on the opposite strand 99/102
(97 %)
0 diff
(100 %id)
CR748538   .a 5791 to 6278 501 to 15   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 487/487
(100 %)
1 diff
(99.8 %id)
AI302273 carcinoid, lung .a 5795 to 6280 487 to 2       486/487
(99 %)
0 diff
(100 %id)
AA219660 brain, neuroepithelial cells .a 5799 to 6280 491 to 5       487/491
(99 %)
0 diff
(100 %id)
AI911086 pooled .a 5813 to 6280 471 to 4       468/471
(99 %)
0 diff
(100 %id)
BM662874 eye, Retina Foveal and Macular .a 5815 to 6280 483 to 18   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 466/466
(100 %)
1 diff
(99.8 %id)
BY799883 eye .a 5821 to 6281 1 to 461       461/462
(99 %)
1 diff
(99.8 %id)
FN063253 breast carcinoma .a 5822 to 5879 1 to 58       58/61
(95 %)
1 diff
(98.4 %id)
BE326393 carcinoid, lung .a 5822 to 6275 461 to 8       454/461
(98 %)
0 diff
(100 %id)
R16149 whole brain .a 5828 to 6280 462 to 4       459/464
(98 %)
0 diff
(100 %id)
FN088463 breast carcinoma .a 5833 to 5940 1 to 109       109/109
(100 %)
2 diff
(98.2 %id)
AI078091   .a 5837 to 6280 448 to 5       444/448
(99 %)
0 diff
(100 %id)
FN090722 breast carcinoma .a 5850 to 5917 1 to 69       69/70
(98 %)
2 diff
(97.2 %id)
AI290174 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 5853 to 6280 428 to 1       428/428
(100 %)
2 diff
(99.6 %id)
AW089620 brain, tumor, 5 pooled (see description) .a 5854 to 6280 427 to 1       427/427
(100 %)
0 diff
(100 %id)
AI222342 pooled .a 5855 to 6280 429 to 4       426/429
(99 %)
0 diff
(100 %id)
AI216528 carcinoid, lung .a 5855 to 6279 425 to 1       425/425
(100 %)
0 diff
(100 %id)
FN167510 breast carcinoma .a 5869 to 5978 1 to 109       109/109
(100 %)
1 diff
(99.1 %id)
AW148612 brain, tumor, 5 pooled (see description) .a 5870 to 6280 412 to 1       412/412
(100 %)
1 diff
(99.8 %id)
AI032253 carcinoid, lung .a 5872 to 6238 367 to 1       367/367
(100 %)
1 diff
(99.8 %id)
FN123882 breast carcinoma .a 5877 to 5980 101 to 1     Submitted on the opposite strand 101/108
(93 %)
1 diff
(99.1 %id)
FN107969 breast carcinoma .a 5878 to 5974 98 to 1     Submitted on the opposite strand 98/113
(86 %)
2 diff
(98.3 %id)
AA206916   .a 5881 to 6280 409 to 5       405/413
(98 %)
0 diff
(100 %id)
AW089301 brain, tumor, 5 pooled (see description) .a 5882 to 6280 399 to 1       399/400
(99 %)
0 diff
(100 %id)
FN139984 breast carcinoma .a 5883 to 5977 97 to 6     Submitted on the opposite strand 92/98
(93 %)
0 diff
(100 %id)
AI215708 carcinoid, lung .a 5887 to 6279 393 to 1       393/393
(100 %)
2 diff
(99.5 %id)
AI214776 carcinoid, lung .a 5890 to 6279 390 to 1       390/390
(100 %)
0 diff
(100 %id)
F26734 pectoral muscle (after mastectomy) .a 5892 to 6171 1 to 281       281/281
(100 %)
2 diff
(99.3 %id)
FN054460 breast carcinoma .a 5902 to 5979 76 to 1     Submitted on the opposite strand 76/77
(98 %)
2 diff
(97.5 %id)
FN098035 breast carcinoma .a 5912 to 5972 60 to 1     Submitted on the opposite strand 60/61
(98 %)
1 diff
(98.4 %id)
FN049667 breast carcinoma .a 5913 to 6005 93 to 1     Submitted on the opposite strand 93/93
(100 %)
0 diff
(100 %id)
BU535748 mixed (pool of 40 RNAs) .a 5915 to 6280 1 to 366   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 366/366
(100 %)
1 diff
(99.8 %id)
FN055352 breast carcinoma .a 5926 to 6008 89 to 1     Submitted on the opposite strand 89/92
(96 %)
6 diff
(93.5 %id)
H92203 eye, retina .a 5926 to 6239 325 to 1       325/376
(86 %)
11 diff
(97.1 %id)
AI802009 carcinoid, lung .a 5928 to 6280 355 to 3       353/361
(97 %)
0 diff
(100 %id)
BF197090 pooled .a 5929 to 6280 357 to 5       353/357
(98 %)
0 diff
(100 %id)
FN139286 breast carcinoma .a 5935 to 6029 93 to 1     Submitted on the opposite strand 93/93
(100 %)
2 diff
(97.9 %id)
AW901573 nervous_normal .a 5936 to 6078 1 to 141       141/142
(99 %)
7 diff
(95.1 %id)
BF448907 sympathetic trunk .a 5936 to 6280 346 to 2       345/346
(99 %)
0 diff
(100 %id)
BF359528 marrow .a 5954 to 6205 273 to 23       251/275
(91 %)
0 diff
(100 %id)
FN118645 breast carcinoma .a 5955 to 6047 96 to 6     Submitted on the opposite strand 91/96
(94 %)
0 diff
(100 %id)
FN155872 breast carcinoma .a 5955 to 6043 86 to 1     Submitted on the opposite strand 86/88
(97 %)
3 diff
(96.6 %id)
FN128011 breast carcinoma .a 5956 to 6046 94 to 5     Submitted on the opposite strand 90/97
(92 %)
0 diff
(100 %id)
T16535   .a 5975 to 6280 305 to 1       305/307
(99 %)
1 diff
(99.7 %id)
FN170881 breast carcinoma .a 5990 to 6055 64 to 1     Submitted on the opposite strand 64/64
(100 %)
3 diff
(95.4 %id)
AA227443 brain, neuroepithelial cells .a 5994 to 6280 287 to 1       287/287
(100 %)
2 diff
(99.4 %id)
FN102646 breast carcinoma .a 6008 to 6121 111 to 1     Submitted on the opposite strand 111/113
(98 %)
3 diff
(97.4 %id)
AI424347 Prostate .a 6018 to 6280 262 to 1       262/262
(100 %)
6 diff
(97.8 %id)
FN175715 breast carcinoma .a 6020 to 6135 1 to 113       113/113
(100 %)
3 diff
(97.4 %id)
BF448818 sympathetic trunk .a 6025 to 6279 256 to 2       255/256
(99 %)
0 diff
(100 %id)
FN050830 breast carcinoma .a 6033 to 6152 120 to 1     Submitted on the opposite strand 120/121
(99 %)
1 diff
(99.2 %id)
CK300810 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 6040 to 6280 40 to 280   AAA Submitted on the opposite strand 241/280
(86 %)
6 diff
(97.9 %id)
FN060223 breast carcinoma .a 6050 to 6164 1 to 117       117/117
(100 %)
3 diff
(97.5 %id)
FN066488 breast carcinoma .a 6050 to 6161 1 to 112       112/116
(96 %)
2 diff
(98.3 %id)
FN066864 breast carcinoma .a 6050 to 6164 1 to 117       117/117
(100 %)
3 diff
(97.5 %id)
AA602178   .a 6055 to 6280 8 to 234   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 227/234
(97 %)
6 diff
(97.5 %id)
FN045823 breast carcinoma .a 6066 to 6129 1 to 64       64/65
(98 %)
1 diff
(98.5 %id)
AI418719 brain, glioblastoma (pooled) .a 6068 to 6280 213 to 1       213/213
(100 %)
0 diff
(100 %id)
FN071782 breast carcinoma .a 6070 to 6150 1 to 79       79/79
(100 %)
2 diff
(97.5 %id)
T16606   .a 6071 to 6279 209 to 1       209/209
(100 %)
0 diff
(100 %id)
DB478245 hippocampus .a 6081 to 6280 1 to 200   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 200/200
(100 %)
0 diff
(100 %id)
FN099098 breast carcinoma .a 6085 to 6193 113 to 5     Submitted on the opposite strand 109/113
(96 %)
0 diff
(100 %id)
FN132306 breast carcinoma .a 6110 to 6221 1 to 113       113/113
(100 %)
4 diff
(96.5 %id)
C20728   .a 6134 to 6279 1 to 146   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 146/146
(100 %)
0 diff
(100 %id)
FN077435 breast carcinoma .a 6134 to 6224 89 to 1     Submitted on the opposite strand 89/89
(100 %)
2 diff
(97.8 %id)
FN094618 breast carcinoma .a 6174 to 6280 1 to 105       105/105
(100 %)
2 diff
(98.1 %id)
CK818880 Islets of Langerhans, Pancreas .a 6188 to 6279 99 to 8       92/99
(92 %)
0 diff
(100 %id)
BC110287 Brain, adult medulla .b 1 to 2867 1 to 2867 exact tiling clone, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 2867/2867
(100 %)
0 diff
(100 %id)
BI830597 brain, medulla .b 1 to 743 1 to 746       746/746
(100 %)
10 diff
(98.7 %id)
TI_57171143   .b 1 to 743 39 to 784       746/784
(95 %)
15 diff
(98.1 %id)
TI_57172265   .c 1 to 836 34 to 865   tiling clone,   832/900
(92 %)
20 diff
(97.8 %id)
BI831432 brain, medulla .c 3 to 836 1 to 830   tiling clone,   830/865
(95 %)
16 diff
(98.2 %id)
BU567982 testis .c 39 to 518 1 to 480   tiling clone,   480/481
(99 %)
3 diff
(99.4 %id)
BU568069 testis .c 39 to 515 1 to 476       476/511
(93 %)
3 diff
(99.5 %id)
AB073396   .c 776 to 3070 1 to 2295   tiling clone,   2295/2295
(100 %)
4 diff
(99.9 %id)
BY798119 eye .c 1586 to 2214 1 to 629   tiling clone,   629/629
(100 %)
1 diff
(99.9 %id)
AA324522 brain, cerebellum .c 1748 to 1952 1 to 205       205/205
(100 %)
0 diff
(100 %id)
TI_149289684   .c 2281 to 3099 886 to 84   tiling clone, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 803/939
(85 %)
53 diff
(94.4 %id)
BM971041 lung .c 2460 to 3083 623 to 1   tiling clone,   623/623
(100 %)
11 diff
(98.3 %id)
AB209191 brain .d 1 to 4841 1 to 4837 exact tiling clone,   4837/4837
(100 %)
2 diff
(100.0 %id)
R12072 whole brain .d 3154 to 3606 1 to 463       463/466
(99 %)
18 diff
(96.2 %id)
H14852 whole brain .d 3717 to 4145 1 to 440       440/441
(99 %)
13 diff
(97.1 %id)
AW161605 brain, frontal lobe .d 4040 to 4352 1 to 313       313/313
(100 %)
0 diff
(100 %id)
AW163345 brain, frontal lobe .d 4054 to 4526 1 to 474   fully sequenced,   474/474
(100 %)
2 diff
(99.6 %id)
N98707 multiple sclerosis lesions .d 4410 to 4842 1 to 438   tiling clone, fully sequenced,   438/438
(100 %)
8 diff
(98.2 %id)
AA992327   .d 4414 to 4841 434 to 7       428/434
(98 %)
0 diff
(100 %id)
AW161945 brain, frontal lobe .d 4415 to 4841 434 to 8       427/434
(98 %)
0 diff
(100 %id)
R37133 whole brain .d 4431 to 4841 428 to 10       419/478
(87 %)
0 diff
(100 %id)
AW157290 brain, frontal lobe .d 4496 to 4846 354 to 3   fully sequenced,   352/354
(99 %)
6 diff
(98.4 %id)
N66104 multiple sclerosis lesions .d 4583 to 4841 261 to 1   fully sequenced,   261/261
(100 %)
0 diff
(100 %id)
H14818 whole brain .d 4649 to 4841 202 to 10       193/202
(95 %)
0 diff
(100 %id)
TI_154115737   .e 1 to 813 862 to 59 F3S T4Y M5H Y9T I10S ... tiling clone,   804/1018
(78 %)
14 diff
(98.7 %id)
CA449408 Chondrosarcoma, Left Pelvis .e 89 to 807 718 to 1   tiling clone,   718/718
(100 %)
1 diff
(99.9 %id)
DB519239 testis .f 1 to 423 1 to 423 exact tiling clone, Submitted on the opposite strand 423/424
(99 %)
1 diff
(99.8 %id)
AI360266 anaplastic oligodendroglioma, brain .f 8 to 422 415 to 1       415/415
(100 %)
0 diff
(100 %id)
BG717254 testis .g 1 to 646 1 to 644 L9W G10V N12T C13A R14E ... tiling clone,   644/644
(100 %)
8 diff
(98.8 %id)
AK126689 cerebellum .h-u 1 to 5131 2 to 5126 exact tiling clone, available from FLJ,   5126/5126
(100 %)
11 diff
(99.8 %id)
DA109731 cerebellum .h-u 1 to 551 2 to 550   capped   549/549
(100 %)
3 diff
(99.5 %id)
DA099715 cerebellum .h-u 107 to 667 2 to 562   tiling clone, capped   561/561
(100 %)
0 diff
(100 %id)
DA106622 cerebellum .h-u 980 to 1542 2 to 564   capped   563/563
(100 %)
3 diff
(99.5 %id)
DA244660 brain .h-u 996 to 1591 2 to 598   capped   597/599
(99 %)
6 diff
(99.0 %id)
AL705207 human skeletal muscle .h-u 1025 to 1700 5 to 681       677/683
(99 %)
24 diff
(96.5 %id)
DA103944 cerebellum .h-u 1136 to 1675 2 to 541   tiling clone, capped   540/540
(100 %)
8 diff
(98.6 %id)
DB299797 cerebellum .h-u 4594 to 5131 538 to 1       538/538
(100 %)
3 diff
(99.5 %id)
CN286800 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .i-u 1 to 721 1 to 721 exact tiling clone,   721/721
(100 %)
0 diff
(100 %id)
BP361727 thalamus .j-u 1 to 583 1 to 583 exact tiling clone,   583/583
(100 %)
0 diff
(100 %id)
DB453784 testis .k 1 to 502 1 to 502 exact tiling clone,   502/503
(99 %)
2 diff
(99.7 %id)
DR978526 brain .k 251 to 461 1 to 210   AAA Submitted on the opposite strand 210/210
(100 %)
4 diff
(98.1 %id)
DR978531 brain .k 251 to 441 1 to 190   AAA Submitted on the opposite strand 190/190
(100 %)
3 diff
(98.5 %id)
BU537119 mixed (pool of 40 RNAs) .k 334 to 491 1 to 150       150/152
(98 %)
16 diff
(89.5 %id)
FN063797 breast carcinoma .k 351 to 441 1 to 91       91/91
(100 %)
0 diff
(100 %id)
CB152129 brain Gene KIF5C, variant not shown         Suspected internal deletion, this clone was ignored    
DB298619 cerebellum Gene KIF5C, variant not shown         This clone was ignored    
DA095070 cerebellum Gene KIF5C, variant not shown       capped This clone was ignored    
DA226139 brain Gene KIF5C, variant not shown       capped Suspected internal deletion, this clone was ignored    
DA501275 brain Gene KIF5C, variant not shown       capped Suspected internal deletion, this clone was ignored    
AV727735 hypothalamus Gene KIF5C, variant not shown         Suspected internal deletion, this clone was ignored    
AV725076 hypothalamus Gene KIF5C, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h-u, .i-u, .j-u, .k Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI