| cDNA accession Links to the sequence |
Tissue most 5' clones in red |
Match mRNA |
From bp to bp in mRNA |
From bp to bp in accs. |
Clone encodes complete protein (with AA variation) |
Features | Anomalies detected by AceView |
Accession match over (% length) |
Base differences relative to genome (% identity) |
| AB011103 | brain | .a | 1 to 6280 | 652 to 6927 | exact | tiling clone, available from KIAA, | 6276/6927 (90 %) | 9 diff (99.9 %id) | |
| BE093611 | breast | .a | 1 to 276 | 27 to 302 | 276/302 (91 %) | 6 diff (98.1 %id) | |||
| NM_004522.1 | .a | 1 to 6280 | 652 to 6927 | exact | RefSeq, | 6276/6927 (90 %) | 9 diff (99.9 %id) | ||
| BG683662 | brain, neuroblastoma, cell line | .a | 7 to 675 | 673 to 1 | 670/677 (98 %) | 5 diff (99.3 %id) | |||
| BC127772 | PCR rescued clones | .a | 8 to 2591 | 10 to 2593 | exact | 2584/2593 (99 %) | 6 diff (99.8 %id) | ||
| BU070567. matches multiple genes | insulinoma, Pancreas | .a | 75 to 762 | 697 to 12 | AAA | Internal priming: the 3' end of the oligo dT primed clone lies in the CDS, also hits gene rimomo | 686/697 (98 %) | 1 diff (99.9 %id) | |
| BF059313 | pooled germ cell tumors | .a | 129 to 756 | 627 to 1 | 627/627 (100 %) | 8 diff (98.8 %id) | |||
| BM929856 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .a | 148 to 741 | 1 to 593 | 593/593 (100 %) | 2 diff (99.7 %id) | |||
| AV747642 | Pituitary | .a | 172 to 710 | 537 to 1 | Submitted on the opposite strand | 537/555 (96 %) | 17 diff (97.0 %id) | ||
| AI651976 | pooled germ cell tumors | .a | 183 to 753 | 574 to 3 | 572/574 (99 %) | 3 diff (99.5 %id) | |||
| AI990737 | pooled germ cell tumors | .a | 220 to 761 | 548 to 7 | AAA | Internal priming: the 3' end of the oligo dT primed clone lies in the CDS | 542/554 (97 %) | 9 diff (98.4 %id) | |
| AW274812 | pooled germ cell tumors | .a | 229 to 756 | 528 to 1 | 528/528 (100 %) | 0 diff (100 %id) | |||
| AA325221 | brain, cerebellum | .a | 230 to 679 | 1 to 450 | 450/450 (100 %) | 0 diff (100 %id) | |||
| T82293 | .a | 246 to 761 | 517 to 5 | 515/526 (97 %) | 21 diff (96.1 %id) | ||||
| BG179733 | adenocarcinoma, cell line, Prostate | .a | 302 to 1079 | 1 to 782 | 782/984 (79 %) | 20 diff (98.0 %id) | |||
| AI673309 | pooled germ cell tumors | .a | 304 to 756 | 451 to 1 | 451/451 (100 %) | 4 diff (99.2 %id) | |||
| AW614011 | pooled germ cell tumors | .a | 304 to 756 | 454 to 1 | 454/455 (99 %) | 1 diff (99.8 %id) | |||
| AI825446 | pooled germ cell tumors | .a | 311 to 756 | 448 to 1 | 448/448 (100 %) | 9 diff (98.0 %id) | |||
| AV748126 | Pituitary | .a | 318 to 764 | 453 to 13 | Submitted on the opposite strand | 441/453 (97 %) | 7 diff (98.5 %id) | ||
| BF954490 | nervous_normal | .a | 406 to 966 | 1 to 559 | 559/559 (100 %) | 8 diff (98.6 %id) | |||
| AI699538 | pooled germ cell tumors | .a | 436 to 756 | 327 to 1 | 325/327 (99 %) | 23 diff (93.0 %id) | |||
| BI035715 | nervous_normal | .a | 540 to 1020 | 18 to 496 | 479/496 (96 %) | 6 diff (98.8 %id) | |||
| BQ340156 | nervous_normal | .a | 540 to 1020 | 18 to 496 | 479/496 (96 %) | 6 diff (98.8 %id) | |||
| BY797369 | eye | .a | 572 to 1166 | 1 to 595 | 595/595 (100 %) | 1 diff (99.9 %id) | |||
| DA068955 | cerebellum | .a | 670 to 1235 | 2 to 569 | capped | 568/568 (100 %) | 2 diff (99.7 %id) | ||
| BE378554 | endometrium, adenocarcinoma cell line, uterus | .a | 676 to 1433 | 1 to 761 | 761/881 (86 %) | 5 diff (99.5 %id) | |||
| BG004183 | placenta_normal | .a | 686 to 1218 | 33 to 563 | 531/563 (94 %) | 8 diff (98.6 %id) | |||
| BP349439 | brain | .a | 720 to 1301 | 1 to 582 | 582/582 (100 %) | 0 diff (100 %id) | |||
| AF010146 | .a | 796 to 1465 | 18 to 687 | 670/694 (96 %) | 7 diff (99.0 %id) | ||||
| AL046486 | testis | .a | 984 to 1613 | 1 to 630 | 630/630 (100 %) | 2 diff (99.7 %id) | |||
| BF090290 | nervous_normal | .a | 1100 to 1404 | 202 to 508 | 307/508 (60 %) | 6 diff (98.9 %id) | |||
| BG004193 | placenta_normal | .a | 1125 to 1666 | 553 to 14 | 540/553 (97 %) | 2 diff (99.7 %id) | |||
| T06093 | .a | 1194 to 1547 | 1 to 360 | 360/360 (100 %) | 7 diff (98.1 %id) | ||||
| BQ375107 | testis_normal | .a | 1195 to 1587 | 1 to 399 | 395/399 (98 %) | 18 diff (95.5 %id) | |||
| CD580200 | brain | .a | 1216 to 2046 | 1 to 826 | 826/831 (99 %) | 16 diff (98.1 %id) | |||
| BP312337 | brain | .a | 1323 to 1906 | 1 to 583 | 583/583 (100 %) | 7 diff (98.8 %id) | |||
| BQ365935 | placenta_normal | .a | 1339 to 1671 | 1 to 335 | 335/348 (96 %) | 9 diff (97.5 %id) | |||
| BF987919 | placenta_normal | .a | 1341 to 1669 | 342 to 14 | 329/342 (96 %) | 1 diff (99.8 %id) | |||
| CN284581 | embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells | .a | 1380 to 1819 | 1 to 440 | 440/440 (100 %) | 2 diff (99.6 %id) | |||
| BU185691 | ductal carcinoma, cell line, Pancreas | .a | 1414 to 2265 | 1 to 861 | 861/902 (95 %) | 19 diff (97.9 %id) | |||
| BQ345641 | nervous_tumor | .a | 1434 to 1606 | 174 to 3 | 172/187 (91 %) | 0 diff (100 %id) | |||
| AL119071 | amygdala | .a | 1578 to 1837 | 1 to 260 | 260/260 (100 %) | 0 diff (100 %id) | |||
| BE701008 | nervous_normal | .a | 1737 to 2139 | 1 to 403 | 403/403 (100 %) | 1 diff (99.8 %id) | |||
| BX463823 | brain, fetal brain | .a | 1772 to 2671 | 11 to 908 | 898/918 (97 %) | 8 diff (99.2 %id) | |||
| DB478291 | hippocampus | .a | 2167 to 2654 | 1 to 486 | 486/486 (100 %) | 5 diff (99.0 %id) | |||
| AA580023 | Prostate | .a | 2230 to 2656 | 1 to 427 | 427/427 (100 %) | 10 diff (97.7 %id) | |||
| AL117393 | Kidney | .a | 2247 to 6279 | 1 to 4025 | available from DKFZ, AAA | Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) | 4025/4026 (99 %) | 16 diff (99.7 %id) | |
| BX418748 | brain, fetal brain | .a | 2282 to 2843 | 521 to 1073 | 553/794 (69 %) | 33 diff (95.9 %id) | |||
| AV728962 | hypothalamus | .a | 2347 to 3030 | 1 to 676 | 676/689 (98 %) | 37 diff (94.7 %id) | |||
| AW298309 | .a | 2376 to 2718 | 358 to 16 | AAA | Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) | 343/343 (100 %) | 0 diff (100 %id) | ||
| DA500588 | brain | .a | 2469 to 3037 | 2 to 570 | capped | 569/569 (100 %) | 0 diff (100 %id) | ||
| BX431512 | brain, fetal brain | .a | 2538 to 3521 | 1 to 982 | 982/986 (99 %) | 50 diff (95.0 %id) | |||
| BX431511 | brain, fetal brain | .a | 2539 to 3507 | 1 to 964 | 964/977 (98 %) | 52 diff (94.7 %id) | |||
| DA229910 | brain | .a | 2544 to 3110 | 2 to 568 | capped | 567/567 (100 %) | 0 diff (100 %id) | ||
| DA402640 | thalamus | .a | 2570 to 3131 | 2 to 563 | capped | 562/562 (100 %) | 0 diff (100 %id) | ||
| DA249042 | brain | .a | 2574 to 3162 | 2 to 589 | capped | 588/588 (100 %) | 1 diff (99.9 %id) | ||
| DB167725 | kidney, tumor tissue | .a | 2576 to 3130 | 2 to 558 | capped | 557/557 (100 %) | 2 diff (99.7 %id) | ||
| DA187378 | amygdala | .a | 2578 to 3110 | 2 to 534 | capped | 533/533 (100 %) | 0 diff (100 %id) | ||
| DA127989 | cerebellum | .a | 2590 to 3170 | 2 to 582 | capped | 581/581 (100 %) | 0 diff (100 %id) | ||
| DA213354 | brain | .a | 2592 to 3049 | 2 to 458 | capped | 457/457 (100 %) | 6 diff (98.7 %id) | ||
| DA323964 | hippocampus | .a | 2593 to 3153 | 2 to 563 | capped | 562/562 (100 %) | 5 diff (99.2 %id) | ||
| DA237534 | brain | .a | 2594 to 3069 | 2 to 477 | capped | 476/476 (100 %) | 0 diff (100 %id) | ||
| DA234813 | brain | .a | 2595 to 3191 | 2 to 598 | capped | 597/597 (100 %) | 0 diff (100 %id) | ||
| DA804244 | brain | .a | 2595 to 3134 | 2 to 542 | capped | 541/541 (100 %) | 4 diff (99.3 %id) | ||
| DA231727 | brain | .a | 2599 to 3150 | 15 to 567 | capped | 553/566 (97 %) | 6 diff (99.0 %id) | ||
| DA334998 | hippocampus | .a | 2599 to 2869 | 10 to 280 | capped | 271/279 (97 %) | 6 diff (97.9 %id) | ||
| AU132547 | .a | 2599 to 3386 | 12 to 798 | capped | Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) | 787/800 (98 %) | 9 diff (98.9 %id) | ||
| DA742052 | .a | 2599 to 3130 | 14 to 546 | capped | 533/545 (97 %) | 6 diff (98.9 %id) | |||
| DA234419 | brain | .a | 2600 to 3183 | 2 to 586 | capped | 585/585 (100 %) | 1 diff (99.9 %id) | ||
| DA806347 | brain | .a | 2601 to 3176 | 2 to 576 | capped | 575/575 (100 %) | 2 diff (99.7 %id) | ||
| DA243982 | brain | .a | 2607 to 3198 | 2 to 592 | capped | 591/591 (100 %) | 2 diff (99.7 %id) | ||
| DA495688 | brain | .a | 2629 to 3196 | 2 to 569 | capped | 568/568 (100 %) | 0 diff (100 %id) | ||
| DA408143 | thalamus | .a | 2633 to 3171 | 2 to 540 | capped | 539/539 (100 %) | 0 diff (100 %id) | ||
| DA110198 | cerebellum | .a | 2644 to 3206 | 2 to 564 | capped | 563/563 (100 %) | 0 diff (100 %id) | ||
| DA108776 | cerebellum | .a | 2651 to 3217 | 2 to 568 | capped | 567/567 (100 %) | 0 diff (100 %id) | ||
| TI_151707200 | .a | 2667 to 3210 | 75 to 609 | Submitted on the opposite strand | 535/1033 (51 %) | 25 diff (97.6 %id) | |||
| DA196223 | amygdala | .a | 2673 to 2919 | 52 to 298 | capped | 247/297 (83 %) | 6 diff (98.0 %id) | ||
| BM668701 | eye, Retina Foveal and Macular | .a | 2673 to 3322 | 1 to 650 | Submitted on the opposite strand | 650/650 (100 %) | 3 diff (99.6 %id) | ||
| DA244104 | brain | .a | 2674 to 3271 | 2 to 600 | capped | 599/599 (100 %) | 1 diff (99.9 %id) | ||
| DA183618 | amygdala | .a | 2677 to 3232 | 2 to 557 | capped | 556/556 (100 %) | 1 diff (99.9 %id) | ||
| DA323210 | hippocampus | .a | 2677 to 3234 | 2 to 560 | capped | 559/559 (100 %) | 1 diff (99.9 %id) | ||
| DA109630 | cerebellum | .a | 2679 to 3209 | 2 to 532 | capped | 531/531 (100 %) | 0 diff (100 %id) | ||
| DA247583 | brain | .a | 2681 to 3270 | 2 to 589 | capped | 588/589 (99 %) | 3 diff (99.5 %id) | ||
| DA412727 | thalamus | .a | 2685 to 3247 | 2 to 564 | capped | 563/563 (100 %) | 0 diff (100 %id) | ||
| DA504553 | brain | .a | 2687 to 3267 | 2 to 583 | capped | 582/582 (100 %) | 1 diff (99.9 %id) | ||
| DA126152 | cerebellum | .a | 2720 to 3321 | 2 to 604 | capped | 603/603 (100 %) | 1 diff (99.9 %id) | ||
| DA802371 | brain | .a | 2735 to 3297 | 2 to 564 | capped | 563/563 (100 %) | 0 diff (100 %id) | ||
| DA100880 | cerebellum | .a | 2743 to 3200 | 2 to 459 | capped | 458/458 (100 %) | 0 diff (100 %id) | ||
| DA238867 | brain | .a | 2790 to 3380 | 2 to 592 | capped | 591/591 (100 %) | 2 diff (99.7 %id) | ||
| DA755413 | .a | 2794 to 3342 | 2 to 550 | capped | 549/549 (100 %) | 1 diff (99.9 %id) | |||
| DA800120 | brain | .a | 2824 to 3370 | 2 to 548 | capped | 547/547 (100 %) | 0 diff (100 %id) | ||
| DA125128 | cerebellum | .a | 2830 to 3376 | 2 to 548 | capped | 547/547 (100 %) | 0 diff (100 %id) | ||
| DA113692 | cerebellum | .a | 2874 to 3430 | 2 to 558 | capped | 557/557 (100 %) | 0 diff (100 %id) | ||
| AA332807 | Embryo, 8 weeks | .a | 2935 to 3195 | 1 to 261 | 261/263 (99 %) | 3 diff (98.9 %id) | |||
| AL050070 | Kidney | .a | 2945 to 6280 | 1 to 3332 | available from DKFZ, AAA | Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) | 3332/3332 (100 %) | 4 diff (99.9 %id) | |
| DA291942 | hippocampus | .a | 2991 to 3558 | 13 to 581 | capped | 569/580 (98 %) | 6 diff (99.0 %id) | ||
| BM693423 | eye, Retina Foveal and Macular | .a | 3001 to 3512 | 518 to 7 | Submitted on the opposite strand | 512/518 (98 %) | 0 diff (100 %id) | ||
| DA721349 | .a | 3033 to 3565 | 2 to 535 | capped | 534/534 (100 %) | 1 diff (99.9 %id) | |||
| DA405070 | thalamus | .a | 3050 to 3506 | 2 to 458 | capped | 457/457 (100 %) | 1 diff (99.8 %id) | ||
| DA503390 | brain | .a | 3054 to 3625 | 2 to 574 | capped | 573/573 (100 %) | 1 diff (99.9 %id) | ||
| DA396528 | thalamus | .a | 3072 to 3668 | 2 to 598 | capped | 597/597 (100 %) | 1 diff (99.9 %id) | ||
| DA210164 | brain | .a | 3088 to 3640 | 2 to 554 | capped | 553/553 (100 %) | 0 diff (100 %id) | ||
| DA505070 | brain | .a | 3098 to 3646 | 2 to 550 | capped | 549/549 (100 %) | 0 diff (100 %id) | ||
| DA798218 | brain | .a | 3098 to 3645 | 2 to 549 | capped | 548/548 (100 %) | 0 diff (100 %id) | ||
| DA809674 | brain | .a | 3098 to 3644 | 2 to 548 | capped | 547/547 (100 %) | 1 diff (99.9 %id) | ||
| AV723274 | hypothalamus | .a | 3104 to 3809 | 1 to 691 | 691/705 (98 %) | 13 diff (98.2 %id) | |||
| DB150964 | thymus | .a | 3123 to 3603 | 2 to 482 | capped | 481/482 (99 %) | 2 diff (99.6 %id) | ||
| DA405331 | thalamus | .a | 3152 to 3664 | 2 to 515 | capped | 514/514 (100 %) | 1 diff (99.9 %id) | ||
| DA190580 | amygdala | .a | 3153 to 3726 | 2 to 575 | capped | 574/574 (100 %) | 0 diff (100 %id) | ||
| DA388368 | thalamus | .a | 3155 to 3746 | 2 to 593 | capped | 592/592 (100 %) | 0 diff (100 %id) | ||
| DA155965 | amygdala | .a | 3160 to 3675 | 2 to 518 | capped | 517/517 (100 %) | 1 diff (99.9 %id) | ||
| DA075291 | cerebellum | .a | 3163 to 3732 | 2 to 571 | capped | 570/570 (100 %) | 0 diff (100 %id) | ||
| DA501516 | brain | .a | 3165 to 3736 | 2 to 571 | capped | 570/570 (100 %) | 2 diff (99.7 %id) | ||
| DA796899 | brain | .a | 3165 to 3720 | 2 to 557 | capped | 556/556 (100 %) | 0 diff (100 %id) | ||
| DA691538 | .a | 3169 to 3736 | 2 to 569 | capped | 568/568 (100 %) | 0 diff (100 %id) | |||
| DA696406 | .a | 3169 to 3742 | 2 to 575 | capped | 574/574 (100 %) | 0 diff (100 %id) | |||
| DA158856 | amygdala | .a | 3174 to 3682 | 2 to 511 | capped | 510/510 (100 %) | 1 diff (99.9 %id) | ||
| DA526510 | brain | .a | 3190 to 3762 | 2 to 574 | capped | 573/573 (100 %) | 0 diff (100 %id) | ||
| DA493834 | brain | .a | 3212 to 3774 | 2 to 567 | capped | 566/566 (100 %) | 5 diff (99.2 %id) | ||
| DA711924 | .a | 3273 to 3842 | 2 to 571 | capped | 570/571 (99 %) | 1 diff (99.9 %id) | |||
| DA179574 | amygdala | .a | 3279 to 3841 | 2 to 564 | capped | 563/563 (100 %) | 1 diff (99.9 %id) | ||
| DA532881 | brain | .a | 3302 to 3878 | 2 to 578 | capped | 577/577 (100 %) | 0 diff (100 %id) | ||
| CN284578 | embryonic stem cells, cell lines H1, H7, andH9 | .a | 3329 to 4064 | 1 to 737 | 737/739 (99 %) | 3 diff (99.6 %id) | |||
| DA149515 | amygdala | .a | 3345 to 3919 | 2 to 576 | capped | 575/577 (99 %) | 1 diff (99.9 %id) | ||
| DA794803 | brain | .a | 3353 to 3928 | 2 to 578 | capped | 577/577 (100 %) | 2 diff (99.7 %id) | ||
| DB176061 | kidney, tumor tissue | .a | 3408 to 3986 | 2 to 580 | capped | 579/579 (100 %) | 1 diff (99.9 %id) | ||
| DA530456 | brain | .a | 3562 to 4074 | 2 to 514 | capped | 513/513 (100 %) | 1 diff (99.9 %id) | ||
| DA175464 | amygdala | .a | 3563 to 4139 | 2 to 570 | capped | 569/569 (100 %) | 4 diff (99.3 %id) | ||
| DA517614 | brain | .a | 3564 to 4055 | 2 to 493 | capped | 492/492 (100 %) | 0 diff (100 %id) | ||
| DA782354 | brain | .a | 3564 to 4094 | 2 to 532 | capped | 531/531 (100 %) | 0 diff (100 %id) | ||
| DA818897 | .a | 3609 to 4168 | 2 to 557 | capped | 556/556 (100 %) | 2 diff (99.7 %id) | |||
| DA531453 | brain | .a | 3613 to 4239 | 2 to 625 | capped | 624/624 (100 %) | 6 diff (99.1 %id) | ||
| AU131582 | .a | 3649 to 4333 | 2 to 680 | capped | 679/679 (100 %) | 4 diff (99.5 %id) | |||
| F11613 | brain, total brain | .a | 3673 to 3992 | 1 to 320 | 320/320 (100 %) | 0 diff (100 %id) | |||
| DA068670 | cerebellum | .a | 3679 to 4179 | 2 to 500 | capped | 499/499 (100 %) | 4 diff (99.2 %id) | ||
| DA135437 | alzheimer cortex | .a | 3720 to 4351 | 2 to 629 | capped | 628/628 (100 %) | 2 diff (99.7 %id) | ||
| DA531636 | brain | .a | 3721 to 4245 | 2 to 523 | capped | 522/522 (100 %) | 7 diff (98.7 %id) | ||
| DA531362 | brain | .a | 3728 to 4218 | 2 to 488 | capped | 487/487 (100 %) | 2 diff (99.6 %id) | ||
| DA698530 | .a | 3729 to 4241 | 2 to 510 | capped | 509/509 (100 %) | 2 diff (99.7 %id) | |||
| DB172738 | kidney, tumor tissue | .a | 3729 to 4320 | 2 to 589 | capped | 588/588 (100 %) | 2 diff (99.7 %id) | ||
| DA734278 | .a | 3746 to 4209 | 2 to 460 | capped | 459/462 (99 %) | 4 diff (99.2 %id) | |||
| DA521639 | brain | .a | 3747 to 4308 | 2 to 559 | capped | 558/558 (100 %) | 2 diff (99.7 %id) | ||
| DB170961 | kidney, tumor tissue | .a | 3750 to 4269 | 2 to 519 | capped | 518/518 (100 %) | 2 diff (99.7 %id) | ||
| DA484820 | brain | .a | 3761 to 4292 | 2 to 527 | capped | 526/526 (100 %) | 3 diff (99.5 %id) | ||
| DA258569 | caudate nucleus | .a | 3765 to 4283 | 2 to 518 | capped | 517/517 (100 %) | 1 diff (99.9 %id) | ||
| DA501487 | brain | .a | 3770 to 4292 | 2 to 524 | capped | 523/523 (100 %) | 0 diff (100 %id) | ||
| DA199565 | brain | .a | 3773 to 4365 | 2 to 590 | capped | 589/589 (100 %) | 2 diff (99.7 %id) | ||
| DA301450 | hippocampus | .a | 3774 to 4329 | 2 to 553 | capped | 552/552 (100 %) | 2 diff (99.7 %id) | ||
| DA301468 | hippocampus | .a | 3774 to 4334 | 2 to 558 | capped | 557/557 (100 %) | 2 diff (99.7 %id) | ||
| DA085551 | cerebellum | .a | 3803 to 4374 | 2 to 570 | capped | 569/569 (100 %) | 3 diff (99.5 %id) | ||
| CK002281 | brain/CNS, Bulk tissue from Human Spinal cord | .a | 3823 to 4075 | 1 to 253 | 253/253 (100 %) | 0 diff (100 %id) | |||
| BP250161 | hippocampus | .a | 3827 to 4423 | 1 to 589 | 589/589 (100 %) | 9 diff (98.5 %id) | |||
| BQ898152 | dorsal root ganglia | .a | 3845 to 4742 | 1 to 907 | 907/935 (97 %) | 6 diff (99.4 %id) | |||
| DA618566 | .a | 3851 to 4438 | 2 to 586 | capped | 585/585 (100 %) | 3 diff (99.5 %id) | |||
| DA200064 | brain | .a | 3856 to 4412 | 2 to 555 | capped | 554/554 (100 %) | 3 diff (99.5 %id) | ||
| DA486305 | brain | .a | 3871 to 4448 | 2 to 574 | capped | 573/573 (100 %) | 4 diff (99.4 %id) | ||
| DB166721 | kidney, tumor tissue | .a | 3872 to 4434 | 2 to 560 | capped | 559/559 (100 %) | 3 diff (99.5 %id) | ||
| DA769493 | brain | .a | 3874 to 4464 | 2 to 587 | capped | 586/586 (100 %) | 4 diff (99.4 %id) | ||
| DA146521 | amygdala | .a | 3882 to 4390 | 2 to 505 | capped | 504/504 (100 %) | 4 diff (99.3 %id) | ||
| DA154340 | amygdala | .a | 3892 to 4470 | 2 to 576 | capped | 575/575 (100 %) | 2 diff (99.7 %id) | ||
| DA179149 | amygdala | .a | 3895 to 4455 | 2 to 558 | capped | 557/557 (100 %) | 2 diff (99.7 %id) | ||
| BY796191 | eye | .a | 3896 to 4484 | 1 to 585 | 585/585 (100 %) | 2 diff (99.7 %id) | |||
| DA305711 | hippocampus | .a | 3910 to 4458 | 2 to 549 | capped | 548/548 (100 %) | 2 diff (99.7 %id) | ||
| DA503780 | brain | .a | 3910 to 4460 | 2 to 550 | capped | 549/549 (100 %) | 1 diff (99.9 %id) | ||
| DA147557 | amygdala | .a | 3916 to 4486 | 2 to 568 | capped | 567/567 (100 %) | 2 diff (99.7 %id) | ||
| BP421154 | small intestine | .a | 3950 to 4425 | 1 to 477 | Submitted on the opposite strand | 477/477 (100 %) | 14 diff (97.1 %id) | ||
| DA086054 | cerebellum | .a | 3967 to 4504 | 2 to 536 | capped | 535/535 (100 %) | 3 diff (99.5 %id) | ||
| CN284579 | embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells | .a | 3968 to 4443 | 1 to 473 | 473/473 (100 %) | 3 diff (99.4 %id) | |||
| DA774406 | brain | .a | 3969 to 4548 | 2 to 573 | capped | 572/572 (100 %) | 5 diff (99.2 %id) | ||
| DA094993 | cerebellum | .a | 3972 to 4543 | 2 to 567 | capped | 566/566 (100 %) | 3 diff (99.5 %id) | ||
| DA139629 | alzheimer cortex | .a | 3974 to 4540 | 2 to 562 | capped | 561/561 (100 %) | 3 diff (99.5 %id) | ||
| DA061598 | cerebellum | .a | 3980 to 4504 | 2 to 522 | capped | 521/521 (100 %) | 2 diff (99.7 %id) | ||
| DA179093 | amygdala | .a | 3981 to 4565 | 2 to 578 | capped | 577/577 (100 %) | 7 diff (98.8 %id) | ||
| M79073 | .a | 3987 to 4380 | 1 to 394 | 394/394 (100 %) | 9 diff (97.8 %id) | ||||
| DA264686 | caudate nucleus | .a | 4066 to 4633 | 2 to 569 | capped | 568/568 (100 %) | 1 diff (99.9 %id) | ||
| DA688082 | .a | 4066 to 4609 | 2 to 546 | tiling clone, capped | 545/545 (100 %) | 3 diff (99.5 %id) | |||
| DA360764 | subthalamic nucleus | .a | 4080 to 4613 | 2 to 535 | capped | 534/534 (100 %) | 0 diff (100 %id) | ||
| DA685322 | .a | 4087 to 4636 | 2 to 551 | capped | 550/550 (100 %) | 0 diff (100 %id) | |||
| DA500675 | brain | .a | 4088 to 4655 | 2 to 569 | capped | 568/568 (100 %) | 0 diff (100 %id) | ||
| BQ187438 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .a | 4089 to 4832 | 1 to 744 | 744/744 (100 %) | 0 diff (100 %id) | |||
| AA081545 | .a | 4090 to 4428 | 1 to 341 | 341/341 (100 %) | 2 diff (99.5 %id) | ||||
| DA683537 | .a | 4096 to 4628 | 2 to 534 | capped | 533/533 (100 %) | 1 diff (99.9 %id) | |||
| DB177400 | kidney, tumor tissue | .a | 4101 to 4641 | 2 to 544 | capped | 543/543 (100 %) | 2 diff (99.7 %id) | ||
| DA068528 | cerebellum | .a | 4111 to 4680 | 2 to 571 | capped | 570/570 (100 %) | 0 diff (100 %id) | ||
| DA082632 | cerebellum | .a | 4124 to 4690 | 2 to 568 | capped | 567/567 (100 %) | 0 diff (100 %id) | ||
| DA139656 | alzheimer cortex | .a | 4171 to 4742 | 2 to 573 | capped | 572/572 (100 %) | 0 diff (100 %id) | ||
| DA054324 | cerebellum | .a | 4172 to 4724 | 2 to 554 | capped | 553/553 (100 %) | 0 diff (100 %id) | ||
| DA168289 | amygdala | .a | 4173 to 4694 | 2 to 524 | capped | 523/523 (100 %) | 2 diff (99.7 %id) | ||
| DA141194 | alzheimer cortex | .a | 4176 to 4743 | 2 to 569 | capped | 568/568 (100 %) | 0 diff (100 %id) | ||
| DA488056 | brain | .a | 4176 to 4744 | 2 to 571 | capped | 570/570 (100 %) | 1 diff (99.9 %id) | ||
| DA055777 | cerebellum | .a | 4179 to 4730 | 2 to 553 | capped | 552/552 (100 %) | 0 diff (100 %id) | ||
| DA065250 | cerebellum | .a | 4179 to 4742 | 2 to 565 | capped | 564/564 (100 %) | 0 diff (100 %id) | ||
| DB168907 | kidney, tumor tissue | .a | 4179 to 4751 | 2 to 573 | capped | 572/572 (100 %) | 4 diff (99.4 %id) | ||
| DA282932 | corpus callosum | .a | 4183 to 4740 | 2 to 559 | capped | 558/558 (100 %) | 1 diff (99.9 %id) | ||
| DA090513 | cerebellum | .a | 4188 to 4763 | 2 to 577 | capped | 576/576 (100 %) | 0 diff (100 %id) | ||
| FN121154 | breast carcinoma | .a | 4191 to 4314 | 123 to 1 | Submitted on the opposite strand | 123/125 (98 %) | 3 diff (97.6 %id) | ||
| DA083211 | cerebellum | .a | 4200 to 4776 | 2 to 579 | capped | 578/578 (100 %) | 1 diff (99.9 %id) | ||
| DA069290 | cerebellum | .a | 4202 to 4771 | 2 to 572 | capped | 571/571 (100 %) | 2 diff (99.7 %id) | ||
| DA365422 | subthalamic nucleus | .a | 4205 to 4777 | 2 to 575 | capped | 574/574 (100 %) | 1 diff (99.9 %id) | ||
| DA149117 | amygdala | .a | 4207 to 4775 | 2 to 573 | capped | 572/574 (99 %) | 5 diff (99.2 %id) | ||
| DA697515 | .a | 4216 to 4775 | 2 to 564 | capped | 563/565 (99 %) | 5 diff (99.2 %id) | |||
| DA070851 | cerebellum | .a | 4251 to 4790 | 2 to 541 | capped | 540/540 (100 %) | 0 diff (100 %id) | ||
| DA360075 | subthalamic nucleus | .a | 4265 to 4834 | 2 to 572 | capped | 571/571 (100 %) | 1 diff (99.9 %id) | ||
| DA364069 | subthalamic nucleus | .a | 4270 to 4835 | 2 to 567 | capped | 566/566 (100 %) | 0 diff (100 %id) | ||
| DA502747 | brain | .a | 4272 to 4832 | 2 to 562 | capped | 561/561 (100 %) | 0 diff (100 %id) | ||
| DA132044 | alzheimer cortex | .a | 4291 to 4856 | 2 to 568 | capped | 567/567 (100 %) | 1 diff (99.9 %id) | ||
| BP250885 | hippocampus | .a | 4294 to 4877 | 1 to 584 | 584/584 (100 %) | 1 diff (99.9 %id) | |||
| BX441551 | brain, fetal brain | .a | 4299 to 5256 | 1 to 958 | tiling clone, | 958/958 (100 %) | 0 diff (100 %id) | ||
| DA071098 | cerebellum | .a | 4312 to 4888 | 2 to 579 | capped | 578/578 (100 %) | 2 diff (99.7 %id) | ||
| DA073036 | cerebellum | .a | 4316 to 4892 | 2 to 578 | capped | 577/577 (100 %) | 0 diff (100 %id) | ||
| DB167916 | kidney, tumor tissue | .a | 4328 to 4898 | 2 to 572 | capped | 571/571 (100 %) | 0 diff (100 %id) | ||
| DB174419 | kidney, tumor tissue | .a | 4328 to 4895 | 2 to 569 | capped | 568/568 (100 %) | 0 diff (100 %id) | ||
| DA690084 | .a | 4338 to 4879 | 2 to 543 | capped | 542/542 (100 %) | 1 diff (99.9 %id) | |||
| DA143719 | amygdala | .a | 4355 to 4914 | 2 to 562 | capped | 561/561 (100 %) | 1 diff (99.9 %id) | ||
| DA201776 | brain | .a | 4356 to 4959 | 2 to 605 | capped | 604/604 (100 %) | 1 diff (99.9 %id) | ||
| DA344819 | substantia nigra | .a | 4358 to 4870 | 2 to 514 | capped | 513/513 (100 %) | 1 diff (99.9 %id) | ||
| DA208373 | brain | .a | 4369 to 4922 | 2 to 556 | capped | 555/555 (100 %) | 1 diff (99.9 %id) | ||
| DA263272 | caudate nucleus | .a | 4382 to 4963 | 2 to 584 | capped | 583/583 (100 %) | 2 diff (99.7 %id) | ||
| T31178 | brain | .a | 4392 to 4771 | 1 to 380 | 380/381 (99 %) | 1 diff (99.8 %id) | |||
| DA359359 | subthalamic nucleus | .a | 4397 to 4953 | 2 to 558 | capped | 557/557 (100 %) | 0 diff (100 %id) | ||
| T08358 | .a | 4416 to 4823 | 1 to 409 | 409/409 (100 %) | 2 diff (99.6 %id) | ||||
| DA068118 | cerebellum | .a | 4434 to 5008 | 2 to 576 | capped | 575/575 (100 %) | 0 diff (100 %id) | ||
| BP307822 | brain | .a | 4435 to 5028 | 1 to 594 | 594/594 (100 %) | 2 diff (99.7 %id) | |||
| AA204758 | .a | 4438 to 4827 | 1 to 390 | 390/391 (99 %) | 1 diff (99.8 %id) | ||||
| DA291563 | hippocampus | .a | 4440 to 4959 | 40 to 559 | capped | 520/558 (93 %) | 6 diff (99.0 %id) | ||
| FN087956 | breast carcinoma | .a | 4508 to 4598 | 1 to 90 | 90/91 (98 %) | 7 diff (92.4 %id) | |||
| DA131773 | alzheimer cortex | .a | 4541 to 5082 | 2 to 544 | capped | 543/543 (100 %) | 1 diff (99.9 %id) | ||
| FN163105 | breast carcinoma | .a | 4580 to 4701 | 122 to 1 | Submitted on the opposite strand | 122/122 (100 %) | 2 diff (98.4 %id) | ||
| DA074983 | cerebellum | .a | 4585 to 5164 | 2 to 581 | capped | 580/580 (100 %) | 0 diff (100 %id) | ||
| DA063565 | cerebellum | .a | 4601 to 5172 | 2 to 573 | capped | 572/572 (100 %) | 2 diff (99.7 %id) | ||
| BF962019 | nervous_normal | .a | 4620 to 5034 | 413 to 2 | 412/413 (99 %) | 0 diff (100 %id) | |||
| DA132118 | alzheimer cortex | .a | 4624 to 5183 | 2 to 561 | capped | 560/560 (100 %) | 1 diff (99.9 %id) | ||
| DA358019 | subthalamic nucleus | .a | 4627 to 5200 | 2 to 575 | capped | 574/574 (100 %) | 1 diff (99.9 %id) | ||
| R15408 | whole brain | .a | 4628 to 5073 | 1 to 456 | 456/485 (94 %) | 17 diff (96.5 %id) | |||
| DA356307 | subthalamic nucleus | .a | 4652 to 4973 | 2 to 324 | capped | 323/323 (100 %) | 1 diff (99.7 %id) | ||
| AV725398 | hypothalamus | .a | 4664 to 5045 | 1 to 380 | 380/383 (99 %) | 7 diff (98.2 %id) | |||
| AA525065 | .a | 4687 to 4951 | 286 to 21 | 266/286 (93 %) | 6 diff (98.0 %id) | ||||
| FN094317 | breast carcinoma | .a | 4733 to 4831 | 101 to 1 | Submitted on the opposite strand | 101/101 (100 %) | 2 diff (98.1 %id) | ||
| FN157107 | breast carcinoma | .a | 4765 to 4862 | 99 to 1 | Submitted on the opposite strand | 99/100 (99 %) | 1 diff (99.0 %id) | ||
| BG501424 | adenocarcinoma, Prostate | .a | 4775 to 5281 | 1 to 507 | 507/507 (100 %) | 0 diff (100 %id) | |||
| M86011 | .a | 4839 to 4983 | 1 to 145 | 145/281 (51 %) | 1 diff (99.7 %id) | ||||
| BG180228 | adenocarcinoma, cell line, Prostate | .a | 4850 to 5566 | 1 to 717 | 717/717 (100 %) | 7 diff (99.1 %id) | |||
| FN063487 | breast carcinoma | .a | 4877 to 4956 | 9 to 90 | 82/90 (91 %) | 6 diff (93.4 %id) | |||
| CR612604 | fetal brain | .a | 4889 to 6263 | 1 to 1375 | 1375/1375 (100 %) | 0 diff (100 %id) | |||
| AL540061 | brain, fetal brain | .a | 4889 to 5729 | 1 to 841 | 841/841 (100 %) | 0 diff (100 %id) | |||
| BX464137 | brain, fetal brain | .a | 4889 to 5618 | 1 to 731 | 731/975 (74 %) | 9 diff (99.1 %id) | |||
| FN099073 | breast carcinoma | .a | 4915 to 5012 | 104 to 6 | Submitted on the opposite strand | 99/104 (95 %) | 0 diff (100 %id) | ||
| AA226736 | brain, neuroepithelial cells | .a | 4917 to 5272 | 1 to 356 | 356/356 (100 %) | 0 diff (100 %id) | |||
| FN131391 | breast carcinoma | .a | 4939 to 5009 | 1 to 71 | 71/72 (98 %) | 1 diff (98.7 %id) | |||
| CD557352 | testis | .a | 4961 to 5766 | 1 to 809 | 809/869 (93 %) | 17 diff (98.1 %id) | |||
| DT216551 | brain | .a | 4972 to 5613 | 1 to 641 | 641/641 (100 %) | 3 diff (99.6 %id) | |||
| BF196739 | brain, glioblastoma (pooled) | .a | 4987 to 5520 | 534 to 1 | 534/538 (99 %) | 0 diff (100 %id) | |||
| CA774922 | Pancreas, Purified pancreatic islet | .a | 4994 to 5619 | 1 to 625 | 625/625 (100 %) | 6 diff (99.1 %id) | |||
| DA117318 | cerebellum | .a | 5028 to 5599 | 2 to 573 | capped | 572/572 (100 %) | 0 diff (100 %id) | ||
| AW995415 | breast_normal | .a | 5031 to 5467 | 8 to 444 | 437/444 (98 %) | 6 diff (98.7 %id) | |||
| AU154058 | .a | 5065 to 5619 | 565 to 12 | AAA | Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) | 554/554 (100 %) | 9 diff (98.4 %id) | ||
| AI698127 | carcinoid, lung | .a | 5070 to 5624 | 556 to 2 | 555/556 (99 %) | 0 diff (100 %id) | |||
| DA607820 | .a | 5070 to 5687 | 2 to 619 | capped | 618/618 (100 %) | 0 diff (100 %id) | |||
| M62096 | .a | 5084 to 5442 | 1 to 360 | 360/360 (100 %) | 9 diff (97.5 %id) | ||||
| BX281762 | brain, hippocampus (see description) | .a | 5114 to 5580 | 28 to 494 | 467/494 (94 %) | 6 diff (98.8 %id) | |||
| BI041362 | nervous_tumor | .a | 5140 to 5438 | 1 to 300 | 300/300 (100 %) | 6 diff (98.0 %id) | |||
| BE670985 | carcinoid, lung | .a | 5149 to 5629 | 1 to 481 | Submitted on the opposite strand | 481/481 (100 %) | 2 diff (99.6 %id) | ||
| BE671161 | carcinoid, lung | .a | 5149 to 5619 | 1 to 471 | Submitted on the opposite strand | 471/471 (100 %) | 1 diff (99.8 %id) | ||
| DA491721 | brain | .a | 5150 to 5642 | 2 to 492 | capped | 491/527 (93 %) | 6 diff (98.9 %id) | ||
| DT218900 | brain | .a | 5151 to 5798 | 1 to 648 | 648/648 (100 %) | 0 diff (100 %id) | |||
| DB546935 | hippocampus | .a | 5159 to 5615 | 1 to 457 | Submitted on the opposite strand | 457/457 (100 %) | 0 diff (100 %id) | ||
| BF364963 | nervous_normal | .a | 5163 to 5353 | 14 to 200 | 187/200 (93 %) | 11 diff (94.5 %id) | |||
| BF364976 | nervous_normal | .a | 5163 to 5618 | 13 to 467 | 455/467 (97 %) | 6 diff (98.8 %id) | |||
| AA541529 | metastatic prostate bone lesion | .a | 5164 to 5511 | 1 to 345 | 345/352 (98 %) | 7 diff (98.1 %id) | |||
| AI301724 | carcinoid, lung | .a | 5205 to 5624 | 421 to 2 | 420/422 (99 %) | 0 diff (100 %id) | |||
| BF364945 | nervous_normal | .a | 5207 to 5650 | 443 to 2 | 442/443 (99 %) | 0 diff (100 %id) | |||
| AI206957 | pooled germ cell tumors | .a | 5207 to 5619 | 426 to 14 | AAA | Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) | 413/413 (100 %) | 1 diff (99.8 %id) | |
| BQ338733 | nervous_normal | .a | 5224 to 5598 | 374 to 1 | 374/374 (100 %) | 19 diff (95.0 %id) | |||
| FN128222 | breast carcinoma | .a | 5225 to 5317 | 94 to 4 | Submitted on the opposite strand | 91/97 (93 %) | 0 diff (100 %id) | ||
| FN113893 | breast carcinoma | .a | 5240 to 5346 | 1 to 107 | 107/107 (100 %) | 1 diff (99.1 %id) | |||
| T31267 | brain | .a | 5243 to 5709 | 1 to 472 | 472/476 (99 %) | 7 diff (98.6 %id) | |||
| FN074351 | breast carcinoma | .a | 5292 to 5386 | 1 to 92 | 92/92 (100 %) | 3 diff (96.8 %id) | |||
| BX463822 | brain, fetal brain | .a | 5295 to 6241 | 955 to 10 | 946/955 (99 %) | 0 diff (100 %id) | |||
| BX445154 | brain, fetal brain | .a | 5305 to 6226 | 917 to 1 | 917/927 (98 %) | 12 diff (98.8 %id) | |||
| FN115433 | breast carcinoma | .a | 5318 to 5391 | 1 to 74 | 74/74 (100 %) | 4 diff (94.6 %id) | |||
| F09268 | brain, total brain | .a | 5332 to 5618 | 287 to 1 | 287/287 (100 %) | 0 diff (100 %id) | |||
| FN171246 | breast carcinoma | .a | 5346 to 5449 | 106 to 3 | Submitted on the opposite strand | 104/106 (98 %) | 0 diff (100 %id) | ||
| FN075900 | breast carcinoma | .a | 5365 to 5479 | 114 to 1 | Submitted on the opposite strand | 114/114 (100 %) | 1 diff (99.2 %id) | ||
| AA082009 | .a | 5365 to 5618 | 258 to 1 | 258/258 (100 %) | 4 diff (98.5 %id) | ||||
| AW901551 | nervous_normal | .a | 5371 to 5872 | 499 to 2 | 498/499 (99 %) | 0 diff (100 %id) | |||
| AW901553 | nervous_normal | .a | 5371 to 5871 | 505 to 3 | 503/505 (99 %) | 0 diff (100 %id) | |||
| BF363887 | nervous_normal | .a | 5371 to 5830 | 460 to 1 | 460/460 (100 %) | 22 diff (95.3 %id) | |||
| AL568201 | brain, fetal brain | .a | 5376 to 6263 | 887 to 1 | 887/887 (100 %) | 17 diff (98.1 %id) | |||
| CF455088 | peripheral nervous system | .a | 5381 to 6215 | 26 to 857 | AAA | 832/903 (92 %) | 13 diff (98.6 %id) | ||
| FN150746 | breast carcinoma | .a | 5384 to 5493 | 1 to 107 | 107/110 (97 %) | 8 diff (92.8 %id) | |||
| BX455250 | brain, fetal brain | .a | 5388 to 6276 | 890 to 1 | 890/893 (99 %) | 7 diff (99.3 %id) | |||
| BX435629 | brain, fetal brain | .a | 5399 to 6277 | 878 to 1 | 878/878 (100 %) | 13 diff (98.6 %id) | |||
| BG150047 | carcinoid, lung | .a | 5418 to 5624 | 212 to 6 | 207/212 (97 %) | 0 diff (100 %id) | |||
| FN091850 | breast carcinoma | .a | 5443 to 5557 | 1 to 114 | 114/114 (100 %) | 3 diff (97.4 %id) | |||
| CA392204 | eye, RPE/choroid | .a | 5466 to 5926 | 1 to 461 | 461/461 (100 %) | 0 diff (100 %id) | |||
| FN163181 | breast carcinoma | .a | 5486 to 5606 | 121 to 1 | Submitted on the opposite strand | 121/121 (100 %) | 0 diff (100 %id) | ||
| FN153416 | breast carcinoma | .a | 5488 to 5610 | 118 to 1 | Submitted on the opposite strand | 118/119 (99 %) | 8 diff (93.3 %id) | ||
| AA625394 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .a | 5489 to 6127 | 1 to 639 | 639/639 (100 %) | 1 diff (99.9 %id) | |||
| AW901566 | nervous_normal | .a | 5493 to 6052 | 576 to 13 | 564/576 (97 %) | 0 diff (100 %id) | |||
| FN144208 | breast carcinoma | .a | 5516 to 5633 | 1 to 121 | 121/122 (99 %) | 4 diff (96.8 %id) | |||
| TI_153949374 | .a | 5538 to 6022 | 79 to 563 | 485/495 (97 %) | 1 diff (99.8 %id) | ||||
| FN071144 | breast carcinoma | .a | 5544 to 5629 | 1 to 88 | 88/89 (98 %) | 3 diff (96.7 %id) | |||
| BX451658 | brain, fetal brain | .a | 5573 to 6280 | 1 to 708 | 708/708 (100 %) | 3 diff (99.6 %id) | |||
| AA319264 | adrenal gland | .a | 5584 to 5775 | 1 to 192 | 192/192 (100 %) | 0 diff (100 %id) | |||
| CK818881 | Islets of Langerhans, Pancreas | .a | 5601 to 6180 | 1 to 580 | 580/580 (100 %) | 0 diff (100 %id) | |||
| BM126859 | Islets of Langerhans, Pancreas | .a | 5617 to 6169 | 1 to 553 | 553/553 (100 %) | 0 diff (100 %id) | |||
| BM126289 | Islets of Langerhans, Pancreas | .a | 5617 to 6167 | 1 to 551 | 551/551 (100 %) | 1 diff (99.9 %id) | |||
| FN086485 | breast carcinoma | .a | 5628 to 5683 | 1 to 56 | 56/57 (98 %) | 1 diff (98.3 %id) | |||
| AW901574 | nervous_normal | .a | 5635 to 6040 | 407 to 3 | 405/407 (99 %) | 0 diff (100 %id) | |||
| AI369327 | anaplastic oligodendroglioma, brain | .a | 5645 to 6121 | 1 to 477 | Submitted on the opposite strand | 477/477 (100 %) | 2 diff (99.6 %id) | ||
| AI366377 | brain, hippocampus (see description) | .a | 5647 to 5988 | 362 to 21 | 342/362 (94 %) | 0 diff (100 %id) | |||
| BF926599 | nervous_tumor | .a | 5649 to 6159 | 513 to 3 | Submitted on the opposite strand | 511/513 (99 %) | 0 diff (100 %id) | ||
| AW901577 | nervous_normal | .a | 5651 to 6078 | 1 to 425 | 425/426 (99 %) | 14 diff (96.8 %id) | |||
| AW901576 | nervous_normal | .a | 5653 to 6078 | 1 to 425 | 425/426 (99 %) | 6 diff (98.6 %id) | |||
| AW901564 | nervous_normal | .a | 5654 to 6078 | 1 to 422 | 422/423 (99 %) | 13 diff (97.0 %id) | |||
| AW901578 | nervous_normal | .a | 5655 to 6078 | 1 to 420 | 420/421 (99 %) | 13 diff (97.0 %id) | |||
| AI268343 | carcinoid, lung | .a | 5658 to 6162 | 1 to 505 | Submitted on the opposite strand | 505/505 (100 %) | 2 diff (99.7 %id) | ||
| BE701877 | nervous_normal | .a | 5666 to 6078 | 1 to 412 | 412/413 (99 %) | 12 diff (97.1 %id) | |||
| AA878238 | carcinoid, lung | .a | 5666 to 6278 | 613 to 1 | 613/613 (100 %) | 0 diff (100 %id) | |||
| AW901575 | nervous_normal | .a | 5671 to 6078 | 1 to 408 | 408/409 (99 %) | 10 diff (97.6 %id) | |||
| AW901554 | nervous_normal | .a | 5686 to 6009 | 329 to 4 | 326/329 (99 %) | 0 diff (100 %id) | |||
| BE701895 | nervous_normal | .a | 5686 to 6078 | 1 to 395 | 395/396 (99 %) | 13 diff (96.8 %id) | |||
| BE701880 | nervous_normal | .a | 5704 to 6076 | 1 to 372 | 372/372 (100 %) | 21 diff (94.4 %id) | |||
| DB366330 | .a | 5704 to 6280 | 576 to 1 | 576/586 (98 %) | 16 diff (97.3 %id) | ||||
| AI810179 | pooled | .a | 5711 to 6280 | 573 to 4 | 570/573 (99 %) | 0 diff (100 %id) | |||
| FN120233 | breast carcinoma | .a | 5713 to 5821 | 1 to 109 | 109/109 (100 %) | 1 diff (99.1 %id) | |||
| BE701888 | nervous_normal | .a | 5716 to 6078 | 10 to 370 | 361/371 (97 %) | 22 diff (94.1 %id) | |||
| BE701890 | nervous_normal | .a | 5717 to 6076 | 1 to 356 | 356/356 (100 %) | 20 diff (94.4 %id) | |||
| BX113455 | whole brain | .a | 5738 to 6278 | 554 to 15 | AAA | Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) | 540/540 (100 %) | 2 diff (99.7 %id) | |
| AA769070 | germinal center B cell | .a | 5738 to 6280 | 565 to 23 | AAA | Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) | 543/543 (100 %) | 1 diff (99.9 %id) | |
| AU153299 | .a | 5746 to 6280 | 536 to 1 | 536/544 (98 %) | 14 diff (97.5 %id) | ||||
| FN141142 | breast carcinoma | .a | 5750 to 5861 | 114 to 1 | Submitted on the opposite strand | 114/114 (100 %) | 2 diff (98.3 %id) | ||
| BF432357 | brain, glioblastoma (pooled) | .a | 5751 to 6280 | 530 to 1 | 530/530 (100 %) | 0 diff (100 %id) | |||
| FN173592 | breast carcinoma | .a | 5774 to 5876 | 1 to 100 | 100/105 (95 %) | 8 diff (92.4 %id) | |||
| BP219763 | caudate nucleus | .a | 5777 to 6217 | 1 to 442 | 442/447 (98 %) | 4 diff (99.2 %id) | |||
| FN086243 | breast carcinoma | .a | 5784 to 5884 | 102 to 4 | Submitted on the opposite strand | 99/102 (97 %) | 0 diff (100 %id) | ||
| CR748538 | .a | 5791 to 6278 | 501 to 15 | AAA | Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) | 487/487 (100 %) | 1 diff (99.8 %id) | ||
| AI302273 | carcinoid, lung | .a | 5795 to 6280 | 487 to 2 | 486/487 (99 %) | 0 diff (100 %id) | |||
| AA219660 | brain, neuroepithelial cells | .a | 5799 to 6280 | 491 to 5 | 487/491 (99 %) | 0 diff (100 %id) | |||
| AI911086 | pooled | .a | 5813 to 6280 | 471 to 4 | 468/471 (99 %) | 0 diff (100 %id) | |||
| BM662874 | eye, Retina Foveal and Macular | .a | 5815 to 6280 | 483 to 18 | AAA | Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) | 466/466 (100 %) | 1 diff (99.8 %id) | |
| BY799883 | eye | .a | 5821 to 6281 | 1 to 461 | 461/462 (99 %) | 1 diff (99.8 %id) | |||
| FN063253 | breast carcinoma | .a | 5822 to 5879 | 1 to 58 | 58/61 (95 %) | 1 diff (98.4 %id) | |||
| BE326393 | carcinoid, lung | .a | 5822 to 6275 | 461 to 8 | 454/461 (98 %) | 0 diff (100 %id) | |||
| R16149 | whole brain | .a | 5828 to 6280 | 462 to 4 | 459/464 (98 %) | 0 diff (100 %id) | |||
| FN088463 | breast carcinoma | .a | 5833 to 5940 | 1 to 109 | 109/109 (100 %) | 2 diff (98.2 %id) | |||
| AI078091 | .a | 5837 to 6280 | 448 to 5 | 444/448 (99 %) | 0 diff (100 %id) | ||||
| FN090722 | breast carcinoma | .a | 5850 to 5917 | 1 to 69 | 69/70 (98 %) | 2 diff (97.2 %id) | |||
| AI290174 | mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus | .a | 5853 to 6280 | 428 to 1 | 428/428 (100 %) | 2 diff (99.6 %id) | |||
| AW089620 | brain, tumor, 5 pooled (see description) | .a | 5854 to 6280 | 427 to 1 | 427/427 (100 %) | 0 diff (100 %id) | |||
| AI222342 | pooled | .a | 5855 to 6280 | 429 to 4 | 426/429 (99 %) | 0 diff (100 %id) | |||
| AI216528 | carcinoid, lung | .a | 5855 to 6279 | 425 to 1 | 425/425 (100 %) | 0 diff (100 %id) | |||
| FN167510 | breast carcinoma | .a | 5869 to 5978 | 1 to 109 | 109/109 (100 %) | 1 diff (99.1 %id) | |||
| AW148612 | brain, tumor, 5 pooled (see description) | .a | 5870 to 6280 | 412 to 1 | 412/412 (100 %) | 1 diff (99.8 %id) | |||
| AI032253 | carcinoid, lung | .a | 5872 to 6238 | 367 to 1 | 367/367 (100 %) | 1 diff (99.8 %id) | |||
| FN123882 | breast carcinoma | .a | 5877 to 5980 | 101 to 1 | Submitted on the opposite strand | 101/108 (93 %) | 1 diff (99.1 %id) | ||
| FN107969 | breast carcinoma | .a | 5878 to 5974 | 98 to 1 | Submitted on the opposite strand | 98/113 (86 %) | 2 diff (98.3 %id) | ||
| AA206916 | .a | 5881 to 6280 | 409 to 5 | 405/413 (98 %) | 0 diff (100 %id) | ||||
| AW089301 | brain, tumor, 5 pooled (see description) | .a | 5882 to 6280 | 399 to 1 | 399/400 (99 %) | 0 diff (100 %id) | |||
| FN139984 | breast carcinoma | .a | 5883 to 5977 | 97 to 6 | Submitted on the opposite strand | 92/98 (93 %) | 0 diff (100 %id) | ||
| AI215708 | carcinoid, lung | .a | 5887 to 6279 | 393 to 1 | 393/393 (100 %) | 2 diff (99.5 %id) | |||
| AI214776 | carcinoid, lung | .a | 5890 to 6279 | 390 to 1 | 390/390 (100 %) | 0 diff (100 %id) | |||
| F26734 | pectoral muscle (after mastectomy) | .a | 5892 to 6171 | 1 to 281 | 281/281 (100 %) | 2 diff (99.3 %id) | |||
| FN054460 | breast carcinoma | .a | 5902 to 5979 | 76 to 1 | Submitted on the opposite strand | 76/77 (98 %) | 2 diff (97.5 %id) | ||
| FN098035 | breast carcinoma | .a | 5912 to 5972 | 60 to 1 | Submitted on the opposite strand | 60/61 (98 %) | 1 diff (98.4 %id) | ||
| FN049667 | breast carcinoma | .a | 5913 to 6005 | 93 to 1 | Submitted on the opposite strand | 93/93 (100 %) | 0 diff (100 %id) | ||
| BU535748 | mixed (pool of 40 RNAs) | .a | 5915 to 6280 | 1 to 366 | AAA | Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) | 366/366 (100 %) | 1 diff (99.8 %id) | |
| FN055352 | breast carcinoma | .a | 5926 to 6008 | 89 to 1 | Submitted on the opposite strand | 89/92 (96 %) | 6 diff (93.5 %id) | ||
| H92203 | eye, retina | .a | 5926 to 6239 | 325 to 1 | 325/376 (86 %) | 11 diff (97.1 %id) | |||
| AI802009 | carcinoid, lung | .a | 5928 to 6280 | 355 to 3 | 353/361 (97 %) | 0 diff (100 %id) | |||
| BF197090 | pooled | .a | 5929 to 6280 | 357 to 5 | 353/357 (98 %) | 0 diff (100 %id) | |||
| FN139286 | breast carcinoma | .a | 5935 to 6029 | 93 to 1 | Submitted on the opposite strand | 93/93 (100 %) | 2 diff (97.9 %id) | ||
| AW901573 | nervous_normal | .a | 5936 to 6078 | 1 to 141 | 141/142 (99 %) | 7 diff (95.1 %id) | |||
| BF448907 | sympathetic trunk | .a | 5936 to 6280 | 346 to 2 | 345/346 (99 %) | 0 diff (100 %id) | |||
| BF359528 | marrow | .a | 5954 to 6205 | 273 to 23 | 251/275 (91 %) | 0 diff (100 %id) | |||
| FN118645 | breast carcinoma | .a | 5955 to 6047 | 96 to 6 | Submitted on the opposite strand | 91/96 (94 %) | 0 diff (100 %id) | ||
| FN155872 | breast carcinoma | .a | 5955 to 6043 | 86 to 1 | Submitted on the opposite strand | 86/88 (97 %) | 3 diff (96.6 %id) | ||
| FN128011 | breast carcinoma | .a | 5956 to 6046 | 94 to 5 | Submitted on the opposite strand | 90/97 (92 %) | 0 diff (100 %id) | ||
| T16535 | .a | 5975 to 6280 | 305 to 1 | 305/307 (99 %) | 1 diff (99.7 %id) | ||||
| FN170881 | breast carcinoma | .a | 5990 to 6055 | 64 to 1 | Submitted on the opposite strand | 64/64 (100 %) | 3 diff (95.4 %id) | ||
| AA227443 | brain, neuroepithelial cells | .a | 5994 to 6280 | 287 to 1 | 287/287 (100 %) | 2 diff (99.4 %id) | |||
| FN102646 | breast carcinoma | .a | 6008 to 6121 | 111 to 1 | Submitted on the opposite strand | 111/113 (98 %) | 3 diff (97.4 %id) | ||
| AI424347 | Prostate | .a | 6018 to 6280 | 262 to 1 | 262/262 (100 %) | 6 diff (97.8 %id) | |||
| FN175715 | breast carcinoma | .a | 6020 to 6135 | 1 to 113 | 113/113 (100 %) | 3 diff (97.4 %id) | |||
| BF448818 | sympathetic trunk | .a | 6025 to 6279 | 256 to 2 | 255/256 (99 %) | 0 diff (100 %id) | |||
| FN050830 | breast carcinoma | .a | 6033 to 6152 | 120 to 1 | Submitted on the opposite strand | 120/121 (99 %) | 1 diff (99.2 %id) | ||
| CK300810 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .a | 6040 to 6280 | 40 to 280 | AAA | Submitted on the opposite strand | 241/280 (86 %) | 6 diff (97.9 %id) | |
| FN060223 | breast carcinoma | .a | 6050 to 6164 | 1 to 117 | 117/117 (100 %) | 3 diff (97.5 %id) | |||
| FN066488 | breast carcinoma | .a | 6050 to 6161 | 1 to 112 | 112/116 (96 %) | 2 diff (98.3 %id) | |||
| FN066864 | breast carcinoma | .a | 6050 to 6164 | 1 to 117 | 117/117 (100 %) | 3 diff (97.5 %id) | |||
| AA602178 | .a | 6055 to 6280 | 8 to 234 | AAA | Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) | 227/234 (97 %) | 6 diff (97.5 %id) | ||
| FN045823 | breast carcinoma | .a | 6066 to 6129 | 1 to 64 | 64/65 (98 %) | 1 diff (98.5 %id) | |||
| AI418719 | brain, glioblastoma (pooled) | .a | 6068 to 6280 | 213 to 1 | 213/213 (100 %) | 0 diff (100 %id) | |||
| FN071782 | breast carcinoma | .a | 6070 to 6150 | 1 to 79 | 79/79 (100 %) | 2 diff (97.5 %id) | |||
| T16606 | .a | 6071 to 6279 | 209 to 1 | 209/209 (100 %) | 0 diff (100 %id) | ||||
| DB478245 | hippocampus | .a | 6081 to 6280 | 1 to 200 | AAA | Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) | 200/200 (100 %) | 0 diff (100 %id) | |
| FN099098 | breast carcinoma | .a | 6085 to 6193 | 113 to 5 | Submitted on the opposite strand | 109/113 (96 %) | 0 diff (100 %id) | ||
| FN132306 | breast carcinoma | .a | 6110 to 6221 | 1 to 113 | 113/113 (100 %) | 4 diff (96.5 %id) | |||
| C20728 | .a | 6134 to 6279 | 1 to 146 | AAA | Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) | 146/146 (100 %) | 0 diff (100 %id) | ||
| FN077435 | breast carcinoma | .a | 6134 to 6224 | 89 to 1 | Submitted on the opposite strand | 89/89 (100 %) | 2 diff (97.8 %id) | ||
| FN094618 | breast carcinoma | .a | 6174 to 6280 | 1 to 105 | 105/105 (100 %) | 2 diff (98.1 %id) | |||
| CK818880 | Islets of Langerhans, Pancreas | .a | 6188 to 6279 | 99 to 8 | 92/99 (92 %) | 0 diff (100 %id) | |||
| BC110287 | Brain, adult medulla | .b | 1 to 2867 | 1 to 2867 | exact | tiling clone, AAA | Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) | 2867/2867 (100 %) | 0 diff (100 %id) |
| BI830597 | brain, medulla | .b | 1 to 743 | 1 to 746 | 746/746 (100 %) | 10 diff (98.7 %id) | |||
| TI_57171143 | .b | 1 to 743 | 39 to 784 | 746/784 (95 %) | 15 diff (98.1 %id) | ||||
| TI_57172265 | .c | 1 to 836 | 34 to 865 | tiling clone, | 832/900 (92 %) | 20 diff (97.8 %id) | |||
| BI831432 | brain, medulla | .c | 3 to 836 | 1 to 830 | tiling clone, | 830/865 (95 %) | 16 diff (98.2 %id) | ||
| BU567982 | testis | .c | 39 to 518 | 1 to 480 | tiling clone, | 480/481 (99 %) | 3 diff (99.4 %id) | ||
| BU568069 | testis | .c | 39 to 515 | 1 to 476 | 476/511 (93 %) | 3 diff (99.5 %id) | |||
| AB073396 | .c | 776 to 3070 | 1 to 2295 | tiling clone, | 2295/2295 (100 %) | 4 diff (99.9 %id) | |||
| BY798119 | eye | .c | 1586 to 2214 | 1 to 629 | tiling clone, | 629/629 (100 %) | 1 diff (99.9 %id) | ||
| AA324522 | brain, cerebellum | .c | 1748 to 1952 | 1 to 205 | 205/205 (100 %) | 0 diff (100 %id) | |||
| TI_149289684 | .c | 2281 to 3099 | 886 to 84 | tiling clone, AAA | Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) | 803/939 (85 %) | 53 diff (94.4 %id) | ||
| BM971041 | lung | .c | 2460 to 3083 | 623 to 1 | tiling clone, | 623/623 (100 %) | 11 diff (98.3 %id) | ||
| AB209191 | brain | .d | 1 to 4841 | 1 to 4837 | exact | tiling clone, | 4837/4837 (100 %) | 2 diff (100.0 %id) | |
| R12072 | whole brain | .d | 3154 to 3606 | 1 to 463 | 463/466 (99 %) | 18 diff (96.2 %id) | |||
| H14852 | whole brain | .d | 3717 to 4145 | 1 to 440 | 440/441 (99 %) | 13 diff (97.1 %id) | |||
| AW161605 | brain, frontal lobe | .d | 4040 to 4352 | 1 to 313 | 313/313 (100 %) | 0 diff (100 %id) | |||
| AW163345 | brain, frontal lobe | .d | 4054 to 4526 | 1 to 474 | fully sequenced, | 474/474 (100 %) | 2 diff (99.6 %id) | ||
| N98707 | multiple sclerosis lesions | .d | 4410 to 4842 | 1 to 438 | tiling clone, fully sequenced, | 438/438 (100 %) | 8 diff (98.2 %id) | ||
| AA992327 | .d | 4414 to 4841 | 434 to 7 | 428/434 (98 %) | 0 diff (100 %id) | ||||
| AW161945 | brain, frontal lobe | .d | 4415 to 4841 | 434 to 8 | 427/434 (98 %) | 0 diff (100 %id) | |||
| R37133 | whole brain | .d | 4431 to 4841 | 428 to 10 | 419/478 (87 %) | 0 diff (100 %id) | |||
| AW157290 | brain, frontal lobe | .d | 4496 to 4846 | 354 to 3 | fully sequenced, | 352/354 (99 %) | 6 diff (98.4 %id) | ||
| N66104 | multiple sclerosis lesions | .d | 4583 to 4841 | 261 to 1 | fully sequenced, | 261/261 (100 %) | 0 diff (100 %id) | ||
| H14818 | whole brain | .d | 4649 to 4841 | 202 to 10 | 193/202 (95 %) | 0 diff (100 %id) | |||
| TI_154115737 | .e | 1 to 813 | 862 to 59 | F3S T4Y M5H Y9T I10S ... | tiling clone, | 804/1018 (78 %) | 14 diff (98.7 %id) | ||
| CA449408 | Chondrosarcoma, Left Pelvis | .e | 89 to 807 | 718 to 1 | tiling clone, | 718/718 (100 %) | 1 diff (99.9 %id) | ||
| DB519239 | testis | .f | 1 to 423 | 1 to 423 | exact | tiling clone, | Submitted on the opposite strand | 423/424 (99 %) | 1 diff (99.8 %id) |
| AI360266 | anaplastic oligodendroglioma, brain | .f | 8 to 422 | 415 to 1 | 415/415 (100 %) | 0 diff (100 %id) | |||
| BG717254 | testis | .g | 1 to 646 | 1 to 644 | L9W G10V N12T C13A R14E ... | tiling clone, | 644/644 (100 %) | 8 diff (98.8 %id) | |
| AK126689 | cerebellum | .h-u | 1 to 5131 | 2 to 5126 | exact | tiling clone, available from FLJ, | 5126/5126 (100 %) | 11 diff (99.8 %id) | |
| DA109731 | cerebellum | .h-u | 1 to 551 | 2 to 550 | capped | 549/549 (100 %) | 3 diff (99.5 %id) | ||
| DA099715 | cerebellum | .h-u | 107 to 667 | 2 to 562 | tiling clone, capped | 561/561 (100 %) | 0 diff (100 %id) | ||
| DA106622 | cerebellum | .h-u | 980 to 1542 | 2 to 564 | capped | 563/563 (100 %) | 3 diff (99.5 %id) | ||
| DA244660 | brain | .h-u | 996 to 1591 | 2 to 598 | capped | 597/599 (99 %) | 6 diff (99.0 %id) | ||
| AL705207 | human skeletal muscle | .h-u | 1025 to 1700 | 5 to 681 | 677/683 (99 %) | 24 diff (96.5 %id) | |||
| DA103944 | cerebellum | .h-u | 1136 to 1675 | 2 to 541 | tiling clone, capped | 540/540 (100 %) | 8 diff (98.6 %id) | ||
| DB299797 | cerebellum | .h-u | 4594 to 5131 | 538 to 1 | 538/538 (100 %) | 3 diff (99.5 %id) | |||
| CN286800 | embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells | .i-u | 1 to 721 | 1 to 721 | exact | tiling clone, | 721/721 (100 %) | 0 diff (100 %id) | |
| BP361727 | thalamus | .j-u | 1 to 583 | 1 to 583 | exact | tiling clone, | 583/583 (100 %) | 0 diff (100 %id) | |
| DB453784 | testis | .k | 1 to 502 | 1 to 502 | exact | tiling clone, | 502/503 (99 %) | 2 diff (99.7 %id) | |
| DR978526 | brain | .k | 251 to 461 | 1 to 210 | AAA | Submitted on the opposite strand | 210/210 (100 %) | 4 diff (98.1 %id) | |
| DR978531 | brain | .k | 251 to 441 | 1 to 190 | AAA | Submitted on the opposite strand | 190/190 (100 %) | 3 diff (98.5 %id) | |
| BU537119 | mixed (pool of 40 RNAs) | .k | 334 to 491 | 1 to 150 | 150/152 (98 %) | 16 diff (89.5 %id) | |||
| FN063797 | breast carcinoma | .k | 351 to 441 | 1 to 91 | 91/91 (100 %) | 0 diff (100 %id) | |||
| CB152129 | brain | Gene KIF5C, variant not shown | Suspected internal deletion, this clone was ignored | ||||||
| DB298619 | cerebellum | Gene KIF5C, variant not shown | This clone was ignored | ||||||
| DA095070 | cerebellum | Gene KIF5C, variant not shown | capped | This clone was ignored | |||||
| DA226139 | brain | Gene KIF5C, variant not shown | capped | Suspected internal deletion, this clone was ignored | |||||
| DA501275 | brain | Gene KIF5C, variant not shown | capped | Suspected internal deletion, this clone was ignored | |||||
| AV727735 | hypothalamus | Gene KIF5C, variant not shown | Suspected internal deletion, this clone was ignored | ||||||
| AV725076 | hypothalamus | Gene KIF5C, variant not shown | Suspected internal deletion, this clone was ignored |