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Gene WHAMMTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
80 supporting clones for gene WHAMM back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AI655288 pooled germ cell tumors .a 1 to 178 7 to 184   tiling clone, AAA Submitted on the opposite strand 178/184
(96 %)
6 diff
(96.8 %id)
NM_001080435.1   .a 5 to 4265 1 to 4261 exact RefSeq,   4261/4261
(100 %)
0 diff
(100 %id)
AA045690 uterus .a 107 to 488 1 to 382   tiling clone, Submitted on the opposite strand 382/382
(100 %)
2 diff
(99.5 %id)
BG339079 leiomyosarcoma cell line, uterus .a 402 to 995 1 to 595       595/598
(99 %)
11 diff
(98.2 %id)
DB462318 testis .a 408 to 1057 1 to 650       650/650
(100 %)
0 diff
(100 %id)
AK126887 amygdala .a 411 to 4263 1 to 3854 R479K A480S S481L L482S R483P ... tiling clone, available from FLJ,   3854/3854
(100 %)
6 diff
(99.9 %id)
DA194400 amygdala .a 412 to 893 2 to 485   capped   484/484
(100 %)
4 diff
(99.2 %id)
BG109080 Bone, osteosarcoma, cell line .a 424 to 1134 1 to 705       705/842
(83 %)
13 diff
(98.5 %id)
AB075851 brain .a 426 to 4062 1 to 3637 exact tiling clone, available from KIAA,   3637/3637
(100 %)
0 diff
(100 %id)
BE883015 leiomyosarcoma, uterus .a 454 to 1121 1 to 676       676/824
(82 %)
28 diff
(96.7 %id)
DR004598 placenta .a 456 to 1020 1 to 562       562/562
(100 %)
20 diff
(96.5 %id)
CR975863 T-Lymphocytes .a 523 to 728 1 to 207       207/207
(100 %)
3 diff
(98.6 %id)
EC496814 Prostate .a 1083 to 1184 9 to 107       99/107
(92 %)
9 diff
(91.6 %id)
EC489015 Prostate .a 1085 to 1184 15 to 113       99/113
(87 %)
7 diff
(93.9 %id)
TI_154005869   .a 1520 to 2060 678 to 126       553/678
(81 %)
14 diff
(98.0 %id)
CA434038 Bone, Subchondral Bone .a 1600 to 2060 502 to 42   AAA   461/484
(95 %)
0 diff
(100 %id)
BF344000 brain, glioblastoma with EGFR amplification .a 1662 to 2394 1 to 731       731/1346
(54 %)
33 diff
(97.6 %id)
BE695693 colon .a 1895 to 2297 12 to 414       403/414
(97 %)
6 diff
(98.6 %id)
BI052612 placenta_normal .a 1931 to 2338 427 to 24       404/427
(94 %)
0 diff
(100 %id)
EC571197 Prostate .a 1951 to 2043 1 to 93       93/93
(100 %)
2 diff
(97.9 %id)
DA466310   .a 2132 to 2689 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
BG402971 bladder, transitional cell papilloma, cell line .a 2235 to 2975 1 to 733       733/918
(79 %)
48 diff
(94.8 %id)
BM556230 duodenal adenocarcinoma, cell line, small intestine .a 2328 to 3205 1 to 893       893/984
(90 %)
18 diff
(98.2 %id)
BE878271 large cell carcinoma, undifferentiated, lung .a 2515 to 3151 1 to 640       640/808
(79 %)
15 diff
(98.2 %id)
DB303504 amygdala .a 3728 to 4263 536 to 1       536/536
(100 %)
2 diff
(99.7 %id)
BQ333055 lung_tumor .b 1 to 545 560 to 18   tiling clone,   543/560
(96 %)
4 diff
(99.3 %id)
AI720998 colon .b 360 to 647 288 to 1   tiling clone,   288/288
(100 %)
1 diff
(99.7 %id)
AI718768 colon .b 360 to 599 293 to 51       243/293
(82 %)
0 diff
(100 %id)
DR977646 brain .b 434 to 595 1 to 161   AAA Submitted on the opposite strand 161/161
(100 %)
2 diff
(98.8 %id)
AI110689 Liver .c 1 to 661 686 to 16 M5W E6N Q7R D8M A9R ... AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 666/671
(99 %)
4 diff
(99.5 %id)
AF063564   .c 1 to 661 686 to 16 M5W E6N Q7R D8M A9R ... tiling clone, AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 666/671
(99 %)
4 diff
(99.5 %id)
CD721825 eye, lacrimal gland .d 1 to 596 1 to 596 exact tiling clone,   596/596
(100 %)
0 diff
(100 %id)
BM150889 leukopheresis .d 91 to 367 1 to 279       279/279
(100 %)
9 diff
(96.8 %id)
BF765157 colon_est .d 453 to 735 298 to 16   tiling clone, Submitted on the opposite strand 283/301
(94 %)
0 diff
(100 %id)
DB103385 thymus .e-u 1 to 561 2 to 562   tiling clone, capped   561/561
(100 %)
1 diff
(99.9 %id)
BQ082202 stomach .e-u 573 to 1220 1 to 645   tiling clone,   645/645
(100 %)
4 diff
(99.4 %id)
BQ082203 stomach .e-u 573 to 1236 1 to 661       661/661
(100 %)
4 diff
(99.4 %id)
BQ346602 nervous_tumor .e-u 578 to 919 344 to 2       343/358
(95 %)
0 diff
(100 %id)
BE567770 bladder, carcinoma, cell line .e-u 686 to 997 1 to 311       311/542
(57 %)
6 diff
(98.9 %id)
BX499885 Liver .e-u 780 to 1306 1 to 526       526/526
(100 %)
1 diff
(99.9 %id)
CK903681 Islets of Langerhans, Pancreas .e-u 826 to 1411 1 to 586   tiling clone,   586/586
(100 %)
2 diff
(99.7 %id)
BI962984 Islets of Langerhans, Pancreas .e-u 842 to 1375 1 to 534       534/534
(100 %)
2 diff
(99.7 %id)
BI963976 Islets of Langerhans, Pancreas .e-u 843 to 1344 1 to 502       502/502
(100 %)
1 diff
(99.9 %id)
H26844 breast .e-u 902 to 1215 1 to 321       321/321
(100 %)
12 diff
(96.3 %id)
BM994255 lung, Metastatic Chondrosarcoma .e-u 1003 to 1723 1 to 726     Submitted on the opposite strand 726/726
(100 %)
7 diff
(99.1 %id)
BU615385 Bone, Human Chondrosarcoma Cell Line .e-u 1301 to 1974 692 to 19   tiling clone, AAA   674/674
(100 %)
3 diff
(99.6 %id)
DB527755 testis .e-u 1333 to 1973 1 to 639     Submitted on the opposite strand 639/639
(100 %)
3 diff
(99.6 %id)
BU101937   .e-u 1352 to 1699 348 to 1       348/348
(100 %)
0 diff
(100 %id)
BU101938   .e-u 1361 to 1713 353 to 1       353/353
(100 %)
0 diff
(100 %id)
AA973916 carcinoid, lung .e-u 1374 to 1805 1 to 433   tiling clone, Submitted on the opposite strand 433/433
(100 %)
1 diff
(99.8 %id)
AA961228 carcinoid, lung .e-u 1374 to 1769 1 to 397     Submitted on the opposite strand 397/397
(100 %)
1 diff
(99.8 %id)
DB342643 thymus .e-u 1401 to 1980 582 to 1       582/582
(100 %)
3 diff
(99.5 %id)
BM846410 myeloma .e-u 1438 to 1888 1 to 451       451/451
(100 %)
0 diff
(100 %id)
BI963715 Islets of Langerhans, Pancreas .e-u 1462 to 1974 513 to 1       513/513
(100 %)
0 diff
(100 %id)
CK903680 Islets of Langerhans, Pancreas .e-u 1490 to 1974 485 to 1       485/485
(100 %)
0 diff
(100 %id)
BI966801 Islets of Langerhans, Pancreas .e-u 1522 to 1974 453 to 1       453/453
(100 %)
0 diff
(100 %id)
AI581142 colon, moderately-differentiated adenocarcinoma .e-u 1542 to 1974 448 to 16   AAA   433/433
(100 %)
5 diff
(98.9 %id)
AA502540 ovary .e-u 1546 to 1988 440 to 3       438/440
(99 %)
0 diff
(100 %id)
R78892 placenta .e-u 1561 to 1963 422 to 1       422/425
(99 %)
28 diff
(93.5 %id)
AA709351 heart .e-u 1563 to 1974 412 to 1       412/412
(100 %)
0 diff
(100 %id)
AI023634   .e-u 1575 to 1979 407 to 3       405/407
(99 %)
0 diff
(100 %id)
BU687025 lung, Primary Lung Epithelial Cells .e-u 1590 to 2169 598 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 580/580
(100 %)
2 diff
(99.7 %id)
BE898068 melanotic melanoma, skin .e-u 1650 to 1985 1 to 336       336/971
(34 %)
3 diff
(99.7 %id)
H26748 breast .e-u 1652 to 1971 332 to 3       330/358
(92 %)
0 diff
(100 %id)
BF432996 carcinoid, lung .e-u 1663 to 1983 332 to 12   AAA   321/321
(100 %)
0 diff
(100 %id)
BF110189 carcinoid, lung .e-u 1663 to 1983 332 to 12   AAA   321/321
(100 %)
0 diff
(100 %id)
R48564 breast .e-u 1700 to 1975 284 to 9       276/284
(97 %)
0 diff
(100 %id)
AJ572320 pectoral muscle (after mastectomy) .e-u 1701 to 1978 8 to 285   AAA   278/285
(97 %)
6 diff
(97.9 %id)
N71692 melanocyte .e-u 1705 to 1975 278 to 7       272/278
(97 %)
0 diff
(100 %id)
AI377476   .e-u 1775 to 2177 408 to 6   tiling clone,   403/408
(98 %)
0 diff
(100 %id)
BQ025729 placenta .e-u 1787 to 2169 401 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 383/383
(100 %)
4 diff
(99.0 %id)
AI865569 normal prostate, Prostate .e-u 1790 to 2155 372 to 7       366/372
(98 %)
0 diff
(100 %id)
AA594411 colon, colon tumor RER+ .e-u 1811 to 2168 358 to 1       358/358
(100 %)
1 diff
(99.8 %id)
EC476572 Prostate .e-u 1891 to 1977 87 to 1       87/87
(100 %)
0 diff
(100 %id)
EC478168 Prostate .e-u 1891 to 1977 87 to 1       87/87
(100 %)
0 diff
(100 %id)
EC491128 Prostate .e-u 1891 to 1974 89 to 6       84/89
(94 %)
0 diff
(100 %id)
EC506162 Prostate .e-u 1891 to 1977 87 to 2       86/87
(98 %)
0 diff
(100 %id)
EC562495 Prostate .e-u 1891 to 1974 86 to 5       82/86
(95 %)
0 diff
(100 %id)
AA381254   Gene WHAMM, variant not shown         This clone was ignored    
DB110883 thymus Gene WHAMM, variant not shown       capped This clone was ignored    
DB343317 thymus Gene WHAMM, variant not shown         This clone was ignored    
AK097947 thymus Gene WHAMM, variant not shown       available from FLJ, This clone was ignored    
U51704 heart, normal gingiva Gene WHAMM, variant not shown         This clone was ignored    
CR736824 multiple sclerosis lesions Gene WHAMM, variant not shown         This clone was ignored    
TI_149308152   Gene WHAMM, variant not shown       AAA This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C