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Gene KIAA1609TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
242 supporting clones for gene KIAA1609 back to top
cDNA accession
Links to the sequence		 Tissue

most 5' clones
in red		 Match
mRNA		 From bp
to bp
in mRNA		 From bp
to bp
in accs.		 Clone encodes
complete protein
(with AA variation)		 Features Anomalies
detected by
AceView		 Accession
match over
(% length)		 Base differences
relative to genome
(% identity)
AA325716 brain, cerebellum .a 399 to 665 1 to 267       267/281
(95 %)		 0 diff
(100 %id)
AA375756 lung .a 285 to 663 1 to 384       384/384
(100 %)		 6 diff
(98.5 %id)
AB046829   .a 131 to 4582 1 to 4683   tiling clone, available from KIAA,   4004/4683
(85 %)		 15 diff
(99.7 %id)
AK021995 whole embryo, mainly body .j-u 1 to 2432 2 to 2433 Y4C D25G tiling clone, available from FLJ,   2433/2433
(100 %)		 21 diff
(99.2 %id)
AK291237   .a 76 to 1586 1 to 1511       1511/1511
(100 %)		 6 diff
(99.7 %id)
AK300132 placenta .c 3 to 1839 1 to 1837 D145E I193V C240R tiling clone,   1837/1837
(100 %)		 6 diff
(99.7 %id)
AK310887 trachea .a 1 to 1960 2 to 1961 I258V C305R Q402H S481L tiling clone,   1961/1961
(100 %)		 7 diff
(99.7 %id)
AL137316 breast cancer .a 1207 to 3406 1 to 2277   available from DKFZ, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 2277/2278
(99 %)		 9 diff
(99.7 %id)
DA020089   .f 51 to 619 2 to 570   capped   569/569
(100 %)		 0 diff
(100 %id)
AW385500 leiomios .b 1817 to 2245 439 to 12   tiling clone,   428/578
(74 %)		 0 diff
(100 %id)
AW749671 breast .a 445 to 700 28 to 279       252/303
(83 %)		 7 diff
(97.7 %id)
AW795989 uterus .b 2708 to 3238 566 to 35       532/575
(92 %)		 0 diff
(100 %id)
AW887807 ovary .b 2078 to 2645 578 to 19       560/578
(96 %)		 0 diff
(100 %id)
AW962209   .a 400 to 1009 1 to 611       611/611
(100 %)		 19 diff
(96.9 %id)
BC023251 Kidney, hypernephroma .a 144 to 1825 1 to 1682   available from MGC, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 1682/1682
(100 %)		 7 diff
(99.6 %id)
BE005268 breast_normal .b 2226 to 2424 28 to 226       199/227
(87 %)		 6 diff
(97.4 %id)
BE008850 breast_normal .b 4498 to 4789 293 to 4     Submitted on the opposite strand 290/295
(98 %)		 0 diff
(100 %id)
BE008866 breast_normal .b 4477 to 4764 288 to 1   tiling clone, Submitted on the opposite strand 288/288
(100 %)		 0 diff
(100 %id)
BE709823 head_neck .b 2560 to 3031 485 to 15       471/485
(97 %)		 0 diff
(100 %id)
BF361269 ovary .b 2043 to 2645 1 to 602       602/658
(91 %)		 18 diff
(97.3 %id)
BF378773 uterus .b 2813 to 3112 308 to 9       300/308
(97 %)		 0 diff
(100 %id)
BF826088 head_normal .f 126 to 496 8 to 378       371/537
(69 %)		 10 diff
(98.2 %id)
BF832818 head_neck .b 2780 to 3324 554 to 13     Submitted on the opposite strand 542/554
(97 %)		 0 diff
(100 %id)
BG989835 head_neck .b 1996 to 2226 22 to 251       230/251
(91 %)		 6 diff
(97.7 %id)
BI335760 skin .b 2673 to 3323 1 to 651       651/651
(100 %)		 1 diff
(99.9 %id)
BQ312151 breast_normal .h 1 to 437 13 to 449 H4Q tiling clone,   437/449
(97 %)		 6 diff
(98.7 %id)
DA075271 cerebellum .f 57 to 626 2 to 571   capped   570/570
(100 %)		 0 diff
(100 %id)
DA185168 amygdala .a 99 to 666 2 to 569   capped   568/568
(100 %)		 0 diff
(100 %id)
DA274744 corpus callosum .a 99 to 643 2 to 546   capped   545/545
(100 %)		 0 diff
(100 %id)
DA313386 hippocampus .k 14 to 483 2 to 472 A38C S40F H41A K42Q L44P ... tiling clone, capped   471/471
(100 %)		 2 diff
(99.6 %id)
DA357245 subthalamic nucleus .l 39 to 599 2 to 562   capped   561/561
(100 %)		 0 diff
(100 %id)
DA359106 subthalamic nucleus .a 353 to 924 2 to 573   capped   572/572
(100 %)		 1 diff
(99.9 %id)
DA403930 thalamus .a 108 to 659 2 to 553   capped   552/552
(100 %)		 0 diff
(100 %id)
DA407604 thalamus .a 129 to 686 2 to 559   capped   558/558
(100 %)		 0 diff
(100 %id)
DA410999 thalamus .a 82 to 638 2 to 558   capped   557/557
(100 %)		 0 diff
(100 %id)
BX104621 heart .b 4514 to 4973 1 to 460   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 460/460
(100 %)		 1 diff
(99.8 %id)
BX109780 liver and spleen .b 2424 to 3199 1 to 776       776/776
(100 %)		 3 diff
(99.7 %id)
CD692999 normal nasopharynx .m-u 1 to 585 26 to 610 exact tiling clone,   585/610
(95 %)		 11 diff
(98.2 %id)
BX403527 placenta .a 80 to 966 1 to 887   fully sequenced,   887/887
(100 %)		 4 diff
(99.6 %id)
BX411564 placenta .a 952 to 1821 872 to 1   fully sequenced,   872/872
(100 %)		 54 diff
(93.9 %id)
CN359968 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .k 50 to 734 1 to 685   tiling clone,   685/685
(100 %)		 1 diff
(99.9 %id)
CN359969 embryonic stem cells, DMSO-treated H9 cellline .a 115 to 605 1 to 492       492/492
(100 %)		 7 diff
(98.6 %id)
CN359970 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 1337 to 1965 1 to 629       629/629
(100 %)		 2 diff
(99.7 %id)
DA425027 colon .a 138 to 685 2 to 550   capped   549/549
(100 %)		 1 diff
(99.9 %id)
CR614446 HeLa cells Cot 25-normalized .e 1 to 1845 1 to 1845 exact tiling clone,   1845/1845
(100 %)		 0 diff
(100 %id)
BX402872   .b 2342 to 3292 938 to 1       938/938
(100 %)		 39 diff
(95.9 %id)
BX402873   .b 27 to 412 1 to 383   tiling clone,   383/383
(100 %)		 15 diff
(96.1 %id)
BX363386   .a 790 to 1769 982 to 1       982/1014
(96 %)		 26 diff
(97.5 %id)
BX363387   .d 43 to 1030 1 to 983   tiling clone,   983/983
(100 %)		 11 diff
(98.9 %id)
BX372204   .a 334 to 1082 752 to 1       752/944
(79 %)		 10 diff
(99.0 %id)
CA392378 eye, RPE/choroid .b 2231 to 2665 1 to 435       435/435
(100 %)		 0 diff
(100 %id)
DA440286 tongue, tumor tissue .a 105 to 675 2 to 573   capped   572/572
(100 %)		 2 diff
(99.7 %id)
DA448247 tongue, tumor tissue .l 4 to 557 2 to 555   capped   554/554
(100 %)		 1 diff
(99.9 %id)
DA448350 tongue, tumor tissue .g 42 to 586 2 to 546 exact capped   545/545
(100 %)		 1 diff
(99.9 %id)
DA455683 tongue, tumor tissue .a 78 to 642 2 to 566   capped   565/565
(100 %)		 0 diff
(100 %id)
CV029342 mixed .a 183 to 868 1 to 686       686/686
(100 %)		 2 diff
(99.8 %id)
DA474899   .a 82 to 641 2 to 561   capped   560/560
(100 %)		 0 diff
(100 %id)
DA474918   .a 125 to 675 2 to 553   capped   552/552
(100 %)		 1 diff
(99.9 %id)
BX476757   .k 1 to 455 4 to 458 Q29R     458/458
(100 %)		 5 diff
(99.0 %id)
BX505041   .k 1 to 478 4 to 481 Q29R tiling clone,   481/481
(100 %)		 4 diff
(99.2 %id)
BX482060   .f 57 to 646 1 to 591       591/626
(94 %)		 9 diff
(98.6 %id)
BX954700   .f 78 to 679 1 to 602 exact tiling clone,   602/602
(100 %)		 1 diff
(99.9 %id)
EC462905 Prostate .b 3616 to 3690 86 to 11       76/94
(80 %)		 0 diff
(100 %id)
EC507090 Prostate .b 3599 to 3703 105 to 1   tiling clone,   105/105
(100 %)		 4 diff
(96.2 %id)
EC522175 Prostate .b 3599 to 3703 106 to 1   tiling clone,   106/106
(100 %)		 4 diff
(96.3 %id)
EC525908 Prostate .b 93 to 188 1 to 96       96/96
(100 %)		 0 diff
(100 %id)
EC550245 Prostate .b 3599 to 3693 109 to 15       95/109
(87 %)		 0 diff
(100 %id)
EL734093 mixed .a 183 to 866 1 to 684       684/684
(100 %)		 1 diff
(99.9 %id)
EL948748 eyeball .b 1937 to 2503 1 to 567   tiling clone,   567/567
(100 %)		 0 diff
(100 %id)
DC350377 brain .a 942 to 1459 1 to 518       518/518
(100 %)		 3 diff
(99.5 %id)
DA498457 brain .a 109 to 599 2 to 492   capped   491/491
(100 %)		 0 diff
(100 %id)
DA510440 brain .f 17 to 595 2 to 579   capped   578/578
(100 %)		 1 diff
(99.9 %id)
DA522731 brain .a 264 to 831 2 to 569   capped   568/568
(100 %)		 1 diff
(99.9 %id)
AV718305 hypothalamus .b 3192 to 3895 1 to 705   tiling clone,   705/705
(100 %)		 12 diff
(98.3 %id)
FN052901 breast carcinoma .b 2660 to 2727 73 to 5     Submitted on the opposite strand 69/74
(93 %)		 0 diff
(100 %id)
FN079123 breast carcinoma .b 2368 to 2466 1 to 95       95/96
(98 %)		 6 diff
(93.8 %id)
FN165466 breast carcinoma .b 2747 to 2846 1 to 102       102/102
(100 %)		 2 diff
(98.1 %id)
DA555020   .f 89 to 655 2 to 568   capped   567/567
(100 %)		 2 diff
(99.7 %id)
DA555636   .a 138 to 693 2 to 557   capped   556/556
(100 %)		 0 diff
(100 %id)
DB354761 whole embryo, mainly head .b 2382 to 2921 537 to 1       537/575
(93 %)		 5 diff
(99.2 %id)
AU120350 whole embryo, mainly body .j-u 1 to 770 2 to 770   capped   769/770
(99 %)		 14 diff
(98.2 %id)
AU146440 whole embryo, mainly body .j-u 1893 to 2432 539 to 1 L2X Y4X L12F D14T R15G ...     539/541
(99 %)		 17 diff
(96.9 %id)
T06705   .b 2697 to 3011 317 to 1       317/318
(99 %)		 2 diff
(99.4 %id)
DA596006   .a 89 to 818 2 to 733   capped   732/732
(100 %)		 4 diff
(99.5 %id)
R17772 whole brain .b 2066 to 2504 1 to 443       443/454
(97 %)		 10 diff
(97.8 %id)
T84458 liver and spleen .b 2421 to 2820 1 to 408       408/415
(98 %)		 15 diff
(96.4 %id)
T84459 liver and spleen .b 2913 to 3318 413 to 6       408/414
(98 %)		 0 diff
(100 %id)
T79155 liver and spleen .b 2850 to 3321 483 to 3       481/484
(99 %)		 0 diff
(100 %id)
R93985 liver and spleen .b 2971 to 3331 369 to 1   fully sequenced,   369/369
(100 %)		 12 diff
(96.8 %id)
R94029 liver and spleen .b 2673 to 3001 1 to 331   fully sequenced,   331/331
(100 %)		 7 diff
(97.9 %id)
N74238 liver and spleen .b 2924 to 3321 402 to 1       402/405
(99 %)		 10 diff
(97.6 %id)
W01242 liver and spleen .b 2570 to 2904 1 to 345       345/355
(97 %)		 19 diff
(94.7 %id)
W19167 lung .i 1 to 420 17 to 435 A3X T4Q R5E A6H S7P ... tiling clone,   420/435
(96 %)		 6 diff
(98.7 %id)
N99979 senescent fibroblast .b 3059 to 3341 277 to 1   fully sequenced,   277/277
(100 %)		 0 diff
(100 %id)
W30917 senescent fibroblast .b 2676 to 3089 1 to 417   fully sequenced,   417/417
(100 %)		 8 diff
(98.1 %id)
AA010738 heart .b 2404 to 2897 1 to 498   fully sequenced,   498/498
(100 %)		 5 diff
(99.0 %id)
AA010889 heart .b 2896 to 3336 445 to 1   fully sequenced,   445/445
(100 %)		 9 diff
(98.0 %id)
AA035541 heart .b 2907 to 3336 433 to 1       433/433
(100 %)		 3 diff
(99.4 %id)
AA062939 heart .b 2403 to 2875 1 to 478       478/480
(99 %)		 8 diff
(98.4 %id)
AA029429 heart .b 4821 to 4976 156 to 1   fully sequenced,   156/156
(100 %)		 1 diff
(99.4 %id)
AA029475 heart .b 4514 to 4956 1 to 445   fully sequenced,   445/445
(100 %)		 3 diff
(99.4 %id)
AA034327 uterus .b 2517 to 2948 1 to 436       436/439
(99 %)		 7 diff
(98.5 %id)
AA115393 colon, tumor .b 1930 to 2497 1 to 569       569/572
(99 %)		 9 diff
(98.5 %id)
AA115394 colon, tumor .b 2572 to 2701 136 to 1       136/136
(100 %)		 7 diff
(94.9 %id)
AA195017 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 2907 to 3336 433 to 1   fully sequenced,   433/433
(100 %)		 0 diff
(100 %id)
AA195124 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 2317 to 2937 1 to 621   fully sequenced,   621/621
(100 %)		 5 diff
(99.2 %id)
AA534935 colon .b 2404 to 2959 556 to 1       556/565
(98 %)		 2 diff
(99.7 %id)
AA604558 lung, lung tumor .b 2928 to 3321 394 to 1       394/394
(100 %)		 0 diff
(100 %id)
AA636129 invasive tumor (cell line), Prostate .b 2977 to 3336 360 to 1       360/360
(100 %)		 0 diff
(100 %id)
AA831624 germinal center B cell .j-u 1986 to 2445 459 to 1   tiling clone,   459/459
(100 %)		 6 diff
(98.7 %id)
AA864757 Kidney, kidney tumor .b 2794 to 3314 521 to 1       521/521
(100 %)		 0 diff
(100 %id)
AA857849 pharynx, squamous cell carcinoma .b 1536 to 1756 220 to 1   tiling clone,   220/220
(100 %)		 6 diff
(97.3 %id)
AA923026 pooled germ cell tumors .b 2541 to 2949 408 to 1       408/408
(100 %)		 2 diff
(99.6 %id)
AA935531 carcinoid, lung .b 2608 to 2964 358 to 1       358/358
(100 %)		 11 diff
(97.0 %id)
AA975969 carcinoid, lung .b 4704 to 4941 1 to 238     Submitted on the opposite strand 238/238
(100 %)		 0 diff
(100 %id)
AA973791 carcinoid, lung .b 2959 to 3364 407 to 1       407/407
(100 %)		 1 diff
(99.8 %id)
AA994022 pooled .b 2905 to 3367 467 to 4   tiling clone,   464/467
(99 %)		 0 diff
(100 %id)
AI168816 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 2976 to 3336 361 to 1       361/361
(100 %)		 3 diff
(99.2 %id)
AI095174 senescent fibroblast .b 3036 to 3321 293 to 8       286/293
(97 %)		 0 diff
(100 %id)
AI083945 senescent fibroblast .b 4621 to 5034 435 to 22   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 414/414
(100 %)		 1 diff
(99.8 %id)
AI187840   .b 2691 to 2960 272 to 3       270/272
(99 %)		 0 diff
(100 %id)
AI302714 carcinoid, lung .b 1638 to 1759 122 to 1   tiling clone,   122/122
(100 %)		 1 diff
(99.2 %id)
AI313217 lung .b 2555 to 2915 361 to 1       361/361
(100 %)		 2 diff
(99.5 %id)
AI333644 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 4541 to 5041 503 to 3   tiling clone,   501/503
(99 %)		 0 diff
(100 %id)
AI523693 Prostate .b 4572 to 5035 464 to 1       464/464
(100 %)		 3 diff
(99.4 %id)
AI499212 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .b 2816 to 3340 525 to 1       525/525
(100 %)		 0 diff
(100 %id)
AI744964 ovary, tumor, 5 pooled (see description) .a 1139 to 1822 682 to 1       682/684
(99 %)		 9 diff
(98.7 %id)
AI624446 adenocarcinoma, Pancreas .b 2907 to 3339 433 to 1       433/433
(100 %)		 1 diff
(99.8 %id)
AI685514 Prostate .b 4572 to 5034 463 to 1       463/463
(100 %)		 3 diff
(99.4 %id)
AI953798 brain, three pooled meningiomas .a 1242 to 1826 585 to 1       585/585
(100 %)		 6 diff
(99.0 %id)
AW105136 pooled .b 2907 to 3339 433 to 1       433/433
(100 %)		 1 diff
(99.8 %id)
AW117603 pooled .b 2980 to 3341 362 to 1       362/362
(100 %)		 0 diff
(100 %id)
AW118649 pooled .a 1469 to 1827 360 to 2       359/360
(99 %)		 0 diff
(100 %id)
AW183688 pooled .b 2550 to 2915 366 to 1       366/366
(100 %)		 2 diff
(99.5 %id)
AW292195   .a 1572 to 1825 271 to 18   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 254/254
(100 %)		 4 diff
(98.5 %id)
AW451942   .a 1388 to 1827 455 to 16       440/455
(96 %)		 0 diff
(100 %id)
BE327800 malignant melanoma, metastatic to lymphnode, skin .a 1590 to 1765 181 to 6       176/181
(97 %)		 0 diff
(100 %id)
BF222108 Prostate .b 2918 to 3338 421 to 1       421/421
(100 %)		 0 diff
(100 %id)
BG249176 hypernephroma, cell line, Kidney .a 144 to 914 1 to 765       765/925
(82 %)		 18 diff
(98.1 %id)
BG252234 adenocarcinoma, cell line, Liver .a 185 to 937 1 to 761       761/893
(85 %)		 26 diff
(97.1 %id)
BG675457 skin .j-u 749 to 1670 1 to 936   tiling clone,   936/956
(97 %)		 41 diff
(95.8 %id)
BG910200 anaplastic oligodendroglioma with 1p/19qloss, brain .a 133 to 866 1 to 736       736/736
(100 %)		 18 diff
(97.6 %id)
BI091129 cervix .a 109 to 904 1 to 808       808/810
(99 %)		 22 diff
(97.3 %id)
BI517431 pooled colon, kidney, stomach .k 31 to 640 12 to 631       621/1212
(51 %)		 34 diff
(97.2 %id)
BI767086 pooled lung and spleen .a 112 to 1006 1 to 891       891/894
(99 %)		 32 diff
(96.5 %id)
BI856840 breast, mammary adenocarcinoma, cell line .b 2235 to 3063 1 to 823       823/823
(100 %)		 10 diff
(98.8 %id)
BM922004 pooled brain, lung, testis .a 41 to 708 1 to 670       670/987
(67 %)		 20 diff
(98.0 %id)
BM926970 brain .b 2653 to 2959 1 to 307   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 307/307
(100 %)		 1 diff
(99.7 %id)
BQ009692 Chondrosarcoma, Left Pubic Bone .b 2598 to 3336 757 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 739/739
(100 %)		 3 diff
(99.6 %id)
BQ231959 melanotic melanoma, skin .b 2306 to 2989 1 to 698       698/932
(74 %)		 18 diff
(98.1 %id)
BQ223321 large cell carcinoma, lung .a 71 to 711 24 to 666       643/880
(73 %)		 15 diff
(98.3 %id)
BQ435017 eye, retinoblastoma .a 1138 to 2010 1 to 898   tiling clone,   898/899
(99 %)		 34 diff
(96.3 %id)
BQ425289 leiomyosarcoma, uterus .g 33 to 724 1 to 700 exact tiling clone,   700/818
(85 %)		 17 diff
(98.0 %id)
BU856861 adenocarcinoma, cell line, breast .a 582 to 1328 1 to 755       755/955
(79 %)		 21 diff
(97.9 %id)
BU860051 adenocarcinoma, cell line, breast .a 582 to 1440 1 to 871       871/944
(92 %)		 24 diff
(97.5 %id)
BU860183 adenocarcinoma, cell line, breast .a 582 to 1260 1 to 680       680/904
(75 %)		 13 diff
(98.6 %id)
BU955954 adenocarcinoma, cell line, breast .a 582 to 1346 1 to 773       773/960
(80 %)		 16 diff
(98.4 %id)
BU957432 adenocarcinoma, cell line, breast .a 581 to 1136 9 to 566       558/988
(56 %)		 18 diff
(98.2 %id)
CX752650 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 1101 to 1851 1 to 748     Submitted on the opposite strand 748/821
(91 %)		 11 diff
(98.7 %id)
CB960138 Human Placenta, placenta .a 89 to 708 28 to 652       625/805
(77 %)		 22 diff
(97.3 %id)
TI_45235733   .k 31 to 640 84 to 703       621/1284
(48 %)		 34 diff
(97.4 %id)
TI_57178761   .a 115 to 1006 37 to 924       888/927
(95 %)		 36 diff
(96.2 %id)
TI_57190247   .b 2234 to 3063 52 to 875       824/824
(100 %)		 10 diff
(98.8 %id)
CB116069 Liver .b 2296 to 2904 11 to 619       609/619
(98 %)		 6 diff
(99.1 %id)
CB160601 Liver .b 2232 to 2718 1 to 487   tiling clone,   487/487
(100 %)		 1 diff
(99.8 %id)
DA650108   .a 66 to 613 2 to 550   capped   549/549
(100 %)		 1 diff
(99.9 %id)
DA650207   .a 562 to 1091 2 to 531   capped   530/530
(100 %)		 5 diff
(99.1 %id)
DA660149   .f 1 to 552 2 to 553   tiling clone, capped   552/552
(100 %)		 2 diff
(99.7 %id)
CD579832 brain .a 118 to 780 1 to 668       668/679
(98 %)		 23 diff
(96.7 %id)
DA662883   .n 1 to 556 2 to 558 exact tiling clone, capped   557/557
(100 %)		 3 diff
(99.5 %id)
NM_020947.3   .a 76 to 5106 1 to 5031   RefSeq,   5031/5031
(100 %)		 0 diff
(100 %id)
DA689462   .a 1147 to 1696 2 to 551   capped   550/550
(100 %)		 2 diff
(99.7 %id)
DA701350   .a 128 to 656 2 to 530   capped   529/529
(100 %)		 0 diff
(100 %id)
DA720891   .l 69 to 630 2 to 563 A49V tiling clone, capped   562/562
(100 %)		 1 diff
(99.9 %id)
DA725672   .d 1 to 558 2 to 559   tiling clone, capped   558/558
(100 %)		 1 diff
(99.9 %id)
DA744142   .g 1 to 551 2 to 552 exact tiling clone, capped   551/551
(100 %)		 1 diff
(99.9 %id)
DA751907   .a 89 to 552 2 to 465   capped   464/464
(100 %)		 1 diff
(99.8 %id)
DA756126   .l 1 to 582 2 to 583   tiling clone, capped   582/582
(100 %)		 0 diff
(100 %id)
DA756387   .a 77 to 606 2 to 531   capped   530/530
(100 %)		 1 diff
(99.9 %id)
DA772182 brain .a 99 to 612 2 to 515   capped   514/514
(100 %)		 1 diff
(99.9 %id)
DA778178 brain .c 1 to 570 2 to 571   tiling clone, capped   570/570
(100 %)		 0 diff
(100 %id)
DA781369 brain .a 69 to 639 2 to 573   capped   572/572
(100 %)		 2 diff
(99.7 %id)
DA786485 brain .a 90 to 656 2 to 568   capped   567/567
(100 %)		 0 diff
(100 %id)
DA794075 brain .f 27 to 541 2 to 517   capped   516/516
(100 %)		 2 diff
(99.7 %id)
DA802757 brain .a 108 to 665 2 to 559   capped   558/558
(100 %)		 0 diff
(100 %id)
DA803083 brain .a 82 to 638 2 to 558   capped   557/557
(100 %)		 0 diff
(100 %id)
DA804137 brain .a 51 to 584 2 to 535   capped   534/534
(100 %)		 0 diff
(100 %id)
DA834486 placenta .c 4 to 723 2 to 721   capped   720/720
(100 %)		 0 diff
(100 %id)
DB328026 placenta .c 3474 to 4039 563 to 1   tiling clone,   563/563
(100 %)		 28 diff
(95.1 %id)
DA838360 placenta .a 1152 to 1713 2 to 564   capped   563/563
(100 %)		 3 diff
(99.5 %id)
DB328321 placenta .a 2856 to 3406 552 to 1   tiling clone,   552/552
(100 %)		 1 diff
(99.9 %id)
DA853172 placenta .a 141 to 696 2 to 557   capped   556/556
(100 %)		 0 diff
(100 %id)
DA859619 placenta .f 89 to 628 2 to 541   capped   540/540
(100 %)		 0 diff
(100 %id)
DA863662 placenta .a 337 to 914 2 to 579   capped   578/578
(100 %)		 2 diff
(99.7 %id)
DA864603 placenta .a 109 to 695 2 to 588   capped   587/587
(100 %)		 0 diff
(100 %id)
BM841751 lymph node, stomach .b 2008 to 2338 1 to 331       331/331
(100 %)		 5 diff
(98.5 %id)
BM843997 lymph node, stomach .b 1994 to 2505 1 to 512       512/512
(100 %)		 1 diff
(99.9 %id)
TI_1948130654   .a 176 to 709 116 to 650       535/1160
(46 %)		 14 diff
(98.8 %id)
TI_1948130655   .a 176 to 964 135 to 932       798/1333
(59 %)		 42 diff
(96.9 %id)
TI_1948130657   .a 851 to 1552 830 to 129       702/1164
(60 %)		 15 diff
(98.8 %id)
TI_1948130992   .a 176 to 885 115 to 821       707/1106
(63 %)		 17 diff
(98.5 %id)
TI_1948130993   .a 176 to 836 104 to 768       665/1328
(50 %)		 23 diff
(98.3 %id)
TI_1948130994   .a 714 to 1552 964 to 129       836/1197
(69 %)		 14 diff
(98.9 %id)
TI_1948131315   .a 176 to 710 117 to 650       534/1087
(49 %)		 15 diff
(98.7 %id)
TI_1948131316   .a 176 to 939 124 to 893       770/1361
(56 %)		 30 diff
(97.8 %id)
TI_1948131318   .a 875 to 1552 813 to 133       681/1214
(56 %)		 20 diff
(98.4 %id)
TI_1948131629   .a 176 to 802 114 to 738       625/1077
(58 %)		 21 diff
(98.1 %id)
TI_1948131630   .a 176 to 1084 123 to 1030       908/1253
(72 %)		 38 diff
(97.0 %id)
TI_1948131631   .a 854 to 1552 828 to 122       707/1303
(54 %)		 21 diff
(98.4 %id)
TI_1948131632   .a 758 to 1552 923 to 130       794/1170
(67 %)		 28 diff
(97.7 %id)
TI_1948209337   .a 176 to 867 128 to 828   fully sequenced,   701/828
(84 %)		 6 diff
(99.3 %id)
TI_1948209338   .a 837 to 1552 843 to 126   tiling clone, fully sequenced,   718/843
(85 %)		 2 diff
(99.8 %id)
TI_1948209493   .a 176 to 882 126 to 836   fully sequenced,   711/836
(85 %)		 10 diff
(98.9 %id)
TI_1948209494   .a 852 to 1552 828 to 122   fully sequenced,   707/828
(85 %)		 2 diff
(99.8 %id)
TI_1948209649   .a 176 to 904 124 to 855   fully sequenced,   732/855
(85 %)		 12 diff
(98.6 %id)
TI_1948209650   .a 874 to 1552 801 to 125   fully sequenced,   677/801
(84 %)		 1 diff
(99.9 %id)
TI_1948209805   .a 176 to 862 124 to 812   fully sequenced,   689/812
(84 %)		 9 diff
(98.9 %id)
TI_1948209806   .a 832 to 1552 849 to 123   fully sequenced,   727/849
(85 %)		 14 diff
(98.4 %id)
DA958397 Spleen .f 33 to 575 2 to 544   capped   543/543
(100 %)		 0 diff
(100 %id)
DA967681 stomach .a 138 to 700 2 to 564   capped   563/563
(100 %)		 1 diff
(99.9 %id)
DR000279 fetal brain .a 839 to 1419 1 to 581       581/581
(100 %)		 4 diff
(99.4 %id)
DR005003 placenta .l 81 to 612 11 to 542       532/542
(98 %)		 6 diff
(98.9 %id)
DR002034 fetal brain .a 166 to 802 1 to 636       636/636
(100 %)		 2 diff
(99.7 %id)
DB008790 cervix, tumor tissue .f 33 to 535 2 to 508   capped   507/507
(100 %)		 4 diff
(99.3 %id)
DB070041 testis .f 17 to 536 2 to 521   capped   520/520
(100 %)		 0 diff
(100 %id)
DB108779 thymus .a 1048 to 1619 2 to 576   capped   575/575
(100 %)		 4 diff
(99.4 %id)
DB147697 thymus .l 1 to 470 2 to 471   capped   470/470
(100 %)		 2 diff
(99.6 %id)
DB148588 thymus .b 1 to 556 2 to 559   tiling clone, capped   558/558
(100 %)		 2 diff
(99.7 %id)
DB154570 thymus .f 57 to 618 2 to 563   capped   562/562
(100 %)		 1 diff
(99.9 %id)
TI_149299491   .b 2107 to 2959 936 to 91   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 846/983
(86 %)		 13 diff
(98.7 %id)
TI_149307093   .b 2587 to 3365 879 to 101   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 779/961
(81 %)		 13 diff
(98.7 %id)
TI_149313454   .a 1000 to 1825 908 to 85   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 824/957
(86 %)		 16 diff
(98.4 %id)
TI_154093695   .b 2707 to 3308 729 to 121   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 609/1137
(53 %)		 17 diff
(98.6 %id)
TI_154196360   .a 197 to 1013 64 to 868   tiling clone,   805/1048
(76 %)		 46 diff
(95.7 %id)
TI_154197992   .a 148 to 1042 97 to 986       890/1006
(88 %)		 19 diff
(98.2 %id)
DB225200 trachea .a 1 to 566 2 to 568   capped   567/576
(98 %)		 1 diff
(99.9 %id)
DB226021 trachea .f 89 to 639 2 to 552   capped   551/559
(98 %)		 2 diff
(99.7 %id)
BM979017 lung, Primary Lung Epithelial Cells .b 2657 to 3365 728 to 19   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 710/710
(100 %)		 3 diff
(99.6 %id)
BM975813 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 2197 to 2959 782 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 764/764
(100 %)		 2 diff
(99.8 %id)
CB305364 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 1144 to 1825 704 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 686/686
(100 %)		 8 diff
(98.9 %id)
CA311398 Human Lung Epithelial cells, lung .a 1171 to 1817 666 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 648/648
(100 %)		 3 diff
(99.6 %id)
BM674034 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1335 to 1836 523 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 505/505
(100 %)		 5 diff
(99.1 %id)
BM715579 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 919 to 1365 1 to 447   fully sequenced, Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 447/447
(100 %)		 1 diff
(99.8 %id)
BM676714 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1233 to 1825 614 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 596/612
(97 %)		 4 diff
(99.4 %id)
BM715013 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1233 to 1825 1 to 593   tiling clone, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 593/593
(100 %)		 1 diff
(99.9 %id)
BU739345 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1233 to 1825 611 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 593/611
(97 %)		 1 diff
(99.9 %id)
CN479317 Bone, Subchondral Bone .b 2654 to 3308 673 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 655/655
(100 %)		 1 diff
(99.9 %id)
DB249387 uterus .f 55 to 603 2 to 550   capped   549/549
(100 %)		 1 diff
(99.9 %id)
DB249648 uterus .c 21 to 520 2 to 501   capped   500/500
(100 %)		 3 diff
(99.4 %id)
DB275140 uterus .f 50 to 618 2 to 570   capped   569/569
(100 %)		 0 diff
(100 %id)
AK297241 brain .a 837 to 1552 843 to 126   tiling clone, Suspected internal deletion, this clone was ignored 718/843
(85 %)		 2 diff
(99.8 %id)
BC060844 Placenta, normal .a 176 to 882 126 to 836   available from MGC, AAA This clone was ignored 711/836
(85 %)		 10 diff
(98.9 %id)
Z44147 brain, total brain .a 852 to 1552 828 to 122     This clone was ignored 707/828
(85 %)		 2 diff
(99.8 %id)
BY796395 eye .a 176 to 904 124 to 855     This clone was ignored 732/855
(85 %)		 12 diff
(98.6 %id)
BU429218 lymph .a 874 to 1552 801 to 125       677/801
(84 %)		 1 diff
(99.9 %id)
BG700609 brain, hippocampus .a 176 to 862 124 to 812     This clone was ignored 689/812
(84 %)		 9 diff
(98.9 %id)
BG748167 eye, normal pigmented retinal epithelium .a 832 to 1552 849 to 123     Suspected internal deletion, this clone was ignored 727/849
(85 %)		 14 diff
(98.4 %id)
DA741215   .f 33 to 575 2 to 544   capped This clone was ignored 543/543
(100 %)		 0 diff
(100 %id)
TI_154150187   .a 138 to 700 2 to 564       563/563
(100 %)		 1 diff
(99.9 %id)
BM671809 eye, optic nerve .a 839 to 1419 1 to 581   AAA Suspected internal deletion, this clone was ignored 581/581
(100 %)		 4 diff
(99.4 %id)
BM710391 eye, optic nerve .l 81 to 612 11 to 542     Suspected internal deletion, this clone was ignored 532/542
(98 %)		 6 diff
(98.9 %id)
DB284125 uterus .a 166 to 802 1 to 636   capped   636/636
(100 %)		 2 diff
(99.7 %id)
DB352678 uterus .f 33 to 535 2 to 508       507/507
(100 %)		 4 diff
(99.3 %id)
DB070041 testis .f 17 to 536 2 to 521   capped   520/520
(100 %)		 0 diff
(100 %id)
DB108779 thymus .a 1048 to 1619 2 to 576   capped   575/575
(100 %)		 4 diff
(99.4 %id)
DB147697 thymus .l 1 to 470 2 to 471   capped   470/470
(100 %)		 2 diff
(99.6 %id)
DB148588 thymus .b 1 to 556 2 to 559   tiling clone, capped   558/558
(100 %)		 2 diff
(99.7 %id)
DB154570 thymus .f 57 to 618 2 to 563   capped   562/562
(100 %)		 1 diff
(99.9 %id)
TI_149299491   .b 2107 to 2959 936 to 91   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 846/983
(86 %)		 13 diff
(98.7 %id)
TI_149307093   .b 2587 to 3365 879 to 101   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 779/961
(81 %)		 13 diff
(98.7 %id)
TI_149313454   .a 1000 to 1825 908 to 85   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 824/957
(86 %)		 16 diff
(98.4 %id)
TI_154093695   .b 2707 to 3308 729 to 121   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 609/1137
(53 %)		 17 diff
(98.6 %id)
TI_154196360   .a 197 to 1013 64 to 868   tiling clone,   805/1048
(76 %)		 46 diff
(95.7 %id)
TI_154197992   .a 148 to 1042 97 to 986       890/1006
(88 %)		 19 diff
(98.2 %id)
DB225200 trachea .a 1 to 566 2 to 568   capped   567/576
(98 %)		 1 diff
(99.9 %id)
DB226021 trachea .f 89 to 639 2 to 552   capped   551/559
(98 %)		 2 diff
(99.7 %id)
BM979017 lung, Primary Lung Epithelial Cells .b 2657 to 3365 728 to 19   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 710/710
(100 %)		 3 diff
(99.6 %id)
BM979017 lung, Primary Lung Epithelial Cells .b 2657 to 3365 728 to 19   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 710/710
(100 %)		 3 diff
(99.6 %id)
BM975813 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 2197 to 2959 782 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 764/764
(100 %)		 2 diff
(99.8 %id)
BM975813 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 2197 to 2959 782 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 764/764
(100 %)		 2 diff
(99.8 %id)
CB305364 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 1144 to 1825 704 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 686/686
(100 %)		 8 diff
(98.9 %id)
CB305364 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 1144 to 1825 704 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 686/686
(100 %)		 8 diff
(98.9 %id)
CA311398 Human Lung Epithelial cells, lung .a 1171 to 1817 666 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 648/648
(100 %)		 3 diff
(99.6 %id)
CA311398 Human Lung Epithelial cells, lung .a 1171 to 1817 666 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 648/648
(100 %)		 3 diff
(99.6 %id)
BM674034 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1335 to 1836 523 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 505/505
(100 %)		 5 diff
(99.1 %id)
BM674034 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1335 to 1836 523 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 505/505
(100 %)		 5 diff
(99.1 %id)
BM715579 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 919 to 1365 1 to 447   fully sequenced, Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 447/447
(100 %)		 1 diff
(99.8 %id)
BM715579 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 919 to 1365 1 to 447   fully sequenced, Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 447/447
(100 %)		 1 diff
(99.8 %id)
BM676714 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1233 to 1825 614 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 596/612
(97 %)		 4 diff
(99.4 %id)
BM676714 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1233 to 1825 614 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 596/612
(97 %)		 4 diff
(99.4 %id)
BM715013 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1233 to 1825 1 to 593   tiling clone, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 593/593
(100 %)		 1 diff
(99.9 %id)
BM715013 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1233 to 1825 1 to 593   tiling clone, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 593/593
(100 %)		 1 diff
(99.9 %id)
BU739345 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1233 to 1825 611 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 593/611
(97 %)		 1 diff
(99.9 %id)
BU739345 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1233 to 1825 611 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 593/611
(97 %)		 1 diff
(99.9 %id)
CN479317 Bone, Subchondral Bone .b 2654 to 3308 673 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 655/655
(100 %)		 1 diff
(99.9 %id)
CN479317 Bone, Subchondral Bone .b 2654 to 3308 673 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 655/655
(100 %)		 1 diff
(99.9 %id)
DB249387 uterus .f 55 to 603 2 to 550   capped   549/549
(100 %)		 1 diff
(99.9 %id)
DB249648 uterus .c 21 to 520 2 to 501   capped   500/500
(100 %)		 3 diff
(99.4 %id)
DB275140 uterus .f 50 to 618 2 to 570   capped   569/569
(100 %)		 0 diff
(100 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j-u, .k, .l, .m-u, .n Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI