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Gene CWC22andZNF385BTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
398 supporting clones for gene CWC22andZNF385B back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BI464596 testis .a 1 to 667 1 to 668   tiling clone, available from MGC,   668/668
(100 %)
11 diff
(98.4 %id)
BC031216 testis .a 6 to 2552 1 to 2546   tiling clone, available from MGC, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 2546/2546
(100 %)
8 diff
(99.7 %id)
NM_020943.2   .a 6 to 3284 1 to 3279 exact RefSeq,   3279/3279
(100 %)
0 diff
(100 %id)
BF699499 brain, primitive neuroectoderm .b 1 to 703 2 to 690       690/841
(82 %)
26 diff
(97.0 %id)
DA012773 adrenal gland .b 1 to 563 2 to 564   tiling clone, capped   563/563
(100 %)
2 diff
(99.7 %id)
DA989988 synovial membrane tissue from rheumatioidarthritis .b 39 to 554 2 to 518   capped   517/517
(100 %)
2 diff
(99.7 %id)
DA041412 bladder .b 49 to 523 2 to 476   capped   475/477
(99 %)
2 diff
(99.6 %id)
DA654987   .b 49 to 612 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DB067614 testis .b 49 to 598 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DB224058 trachea .b 50 to 618 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA699668   .b 54 to 577 2 to 525   capped   524/524
(100 %)
0 diff
(100 %id)
DA786221 brain .b 55 to 567 2 to 518   capped   517/517
(100 %)
4 diff
(99.3 %id)
DA992442 synovial membrane tissue from rheumatioidarthritis .b 67 to 615 2 to 550   capped   549/549
(100 %)
5 diff
(99.1 %id)
DA948614 Spleen .b 68 to 608 2 to 545   capped   544/544
(100 %)
4 diff
(99.3 %id)
DA440680 tongue, tumor tissue .b 69 to 655 2 to 588   capped   587/587
(100 %)
1 diff
(99.9 %id)
DA960227 Spleen .b 69 to 626 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA954984 Spleen .b 85 to 657 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DA023422   .b 139 to 700 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DA317435 hippocampus .b 227 to 778 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
DA339523 hippocampus .b 227 to 802 2 to 577   capped   576/576
(100 %)
2 diff
(99.7 %id)
BG699336 brain, hippocampus .b 227 to 969 1 to 743       743/747
(99 %)
12 diff
(98.4 %id)
DA466422   .b 229 to 802 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
CB991629 placenta, pre-eclamptic placenta .b 229 to 968 26 to 768   available from MGC,   743/826
(89 %)
22 diff
(97.4 %id)
BC057826 Placenta, pre-eclamptic .b 231 to 2630 1 to 2399   tiling clone, available from MGC, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 2399/2403
(99 %)
5 diff
(99.8 %id)
AK025635   .b 232 to 2630 1 to 2397   available from FLJ, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 2397/2401
(99 %)
7 diff
(99.8 %id)
DA650392   .b 233 to 793 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DA790017 brain .b 235 to 799 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA993626 synovial membrane tissue from rheumatioidarthritis .b 235 to 783 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DW410755 Liver .b 236 to 550 18 to 332       315/332
(94 %)
7 diff
(97.9 %id)
DA178221 amygdala .b 237 to 797 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA224599 brain .b 237 to 803 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA434270 tongue, tumor tissue .b 237 to 762 2 to 528   capped   527/527
(100 %)
3 diff
(99.5 %id)
DA630615 Kidney .b 237 to 811 2 to 576   capped   575/575
(100 %)
2 diff
(99.7 %id)
DA643261   .b 237 to 777 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DA812476 ovary, tumor tissue .b 237 to 937 2 to 699   capped   698/698
(100 %)
4 diff
(99.5 %id)
DA901705   .b 237 to 750 2 to 515   capped   514/514
(100 %)
0 diff
(100 %id)
DA019252   .b 238 to 805 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA304252 hippocampus .b 238 to 806 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
CD696789 normal nasopharynx .b 238 to 530 18 to 311       294/311
(94 %)
8 diff
(97.5 %id)
DA501492 brain .b 238 to 809 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DA501901 brain .b 238 to 794 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA578043   .b 238 to 805 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA591412 lung .b 238 to 813 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA643895   .b 238 to 825 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DB211548 trachea .b 238 to 777 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DA381711 thalamus .b 240 to 802 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA468087   .b 240 to 806 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA539240 Kidney .b 240 to 826 2 to 588   capped   587/587
(100 %)
1 diff
(99.9 %id)
DA564359 heart .b 240 to 799 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA677583   .b 240 to 808 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA785370 brain .b 240 to 555 2 to 317   capped   316/316
(100 %)
0 diff
(100 %id)
DA790531 brain .b 240 to 777 2 to 538   capped   537/537
(100 %)
2 diff
(99.7 %id)
DA814367   .b 240 to 795 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA921479 small intestine .b 240 to 797 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA926460 small intestine .b 240 to 806 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DA929130 small intestine .b 240 to 808 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA001420   .b 242 to 745 2 to 506   capped   505/505
(100 %)
1 diff
(99.9 %id)
DA168303 amygdala .b 242 to 801 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA301884 hippocampus .b 242 to 796 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA530345 brain .b 242 to 806 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA552698   .b 244 to 790 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
CD701252 normal nasopharynx .b 246 to 662 9 to 425       417/425
(98 %)
6 diff
(98.6 %id)
DA385045 thalamus .b 247 to 806 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
CD653459 Embryonic Stem cells .b 247 to 969 40 to 760       721/857
(84 %)
21 diff
(97.6 %id)
DA739985   .b 247 to 787 2 to 543   capped   542/542
(100 %)
1 diff
(99.9 %id)
DB072596 testis .b 248 to 771 2 to 525   capped   524/524
(100 %)
0 diff
(100 %id)
DB141427 thymus .b 248 to 702 2 to 456   capped   455/455
(100 %)
0 diff
(100 %id)
DB257475 uterus .b 248 to 811 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DB033206 testis .b 249 to 822 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DB075619 testis .b 249 to 837 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
DA377980 thalamus .b 251 to 886 2 to 637   capped   636/636
(100 %)
1 diff
(99.9 %id)
DA470155   .b 251 to 821 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA525737 brain .b 251 to 821 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DA690436   .b 251 to 733 2 to 484   capped   483/483
(100 %)
0 diff
(100 %id)
DA736600   .b 251 to 1062 2 to 808   capped   807/807
(100 %)
7 diff
(99.2 %id)
DA804168 brain .b 251 to 797 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
DA856715 placenta .b 251 to 805 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DN998296 breast cancer, Mammary gland (cancer tissue) .b 251 to 860 1 to 610       610/610
(100 %)
5 diff
(99.2 %id)
DA853758 placenta .b 252 to 804 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DB061627 testis .b 253 to 826 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DB079770 testis .b 253 to 740 2 to 489   capped   488/488
(100 %)
2 diff
(99.6 %id)
CN359952 embryonic stem cells, cell lines H1, H7, andH9 .b 254 to 951 1 to 698       698/698
(100 %)
2 diff
(99.8 %id)
DA145188 amygdala .b 256 to 832 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
BU165349 eye, retinoblastoma .b 257 to 1138 1 to 886       886/903
(98 %)
9 diff
(99.1 %id)
CN359950 embryonic stem cells, DMSO-treated H9 cellline .b 262 to 957 7 to 702       696/702
(99 %)
1 diff
(99.9 %id)
BU182838 melanotic melanoma, skin .b 263 to 1073 1 to 816       816/819
(99 %)
6 diff
(99.3 %id)
BC016651 Lymph, lymphoma .b 265 to 2630 1 to 2365   available from MGC, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 2365/2369
(99 %)
5 diff
(99.8 %id)
AB046824   .b 270 to 3367 1 to 3098 exact tiling clone, available from KIAA,   3098/3098
(100 %)
0 diff
(100 %id)
BG107123 lymph, lymphoma, cell line .b 273 to 1091 9 to 833   available from MGC,   828/905
(91 %)
34 diff
(96.3 %id)
DB065601 testis .b 276 to 569 292 to 585   capped   584/584
(100 %)
1 diff
(99.9 %id)
AL135205 melanoma (MeWo cell line) .b 285 to 523 1 to 252       252/252
(100 %)
18 diff
(92.9 %id)
AL135186 melanoma (MeWo cell line) .b 287 to 534 1 to 248       248/248
(100 %)
2 diff
(99.2 %id)
CN359955 embryonic stem cells, cell lines H1, H7, andH9 .b 292 to 888 1 to 596       596/596
(100 %)
4 diff
(99.4 %id)
ES312652 beard hair, skin .b 293 to 411 1 to 118       118/118
(100 %)
1 diff
(99.2 %id)
DA472580   .b 299 to 815 2 to 518   capped   517/517
(100 %)
0 diff
(100 %id)
CN359949 embryonic stem cells, cell lines H1, H7, andH9 .b 302 to 867 1 to 566       566/566
(100 %)
0 diff
(100 %id)
CN359951 embryonic stem cells, DMSO-treated H9 cellline .b 322 to 674 1 to 355       355/355
(100 %)
2 diff
(99.5 %id)
BG431095 Kidney .b 325 to 1138 1 to 803       803/838
(95 %)
21 diff
(97.5 %id)
CB956379 Pooled-Glandular .b 337 to 1073 1 to 745       745/756
(98 %)
12 diff
(98.5 %id)
TI_891527628   .b 358 to 1452 41 to 1131       1091/1257
(86 %)
17 diff
(98.7 %id)
TI_891527636   .b 358 to 1512 37 to 1175       1142/1238
(92 %)
23 diff
(98.2 %id)
TI_891527627   .b 358 to 1517 38 to 1184       1147/1230
(93 %)
64 diff
(94.8 %id)
TI_891527635   .b 358 to 1492 38 to 1152       1115/1214
(91 %)
34 diff
(97.2 %id)
BC093952 Brain, cerebellum, PCR rescued clones .b 367 to 3145 1 to 2779 S773R     2779/2779
(100 %)
3 diff
(99.9 %id)
BC093954 Brain, cerebellum, PCR rescued clones .b 367 to 3145 1 to 2779 S773R     2779/2779
(100 %)
3 diff
(99.9 %id)
DA444959 tongue, tumor tissue .b 368 to 969 2 to 603   capped   602/602
(100 %)
0 diff
(100 %id)
BQ435052 leiomyosarcoma, uterus .b 374 to 1246 1 to 880       880/881
(99 %)
11 diff
(98.8 %id)
BG163675 hypernephroma, cell line, Kidney .b 466 to 1091 1 to 628       628/991
(63 %)
18 diff
(98.2 %id)
CN359948 embryonic stem cells, cell lines H1, H7, andH9 .b 482 to 920 11 to 452       442/452
(97 %)
8 diff
(98.3 %id)
AL037660 brain .b 508 to 982 1 to 479       479/577
(83 %)
16 diff
(97.3 %id)
FN090518 breast carcinoma .b 563 to 642 81 to 1     Submitted on the opposite strand 81/82
(98 %)
1 diff
(98.8 %id)
BC053573 Eye, retinoblastoma .b 567 to 3366 1 to 2800   available from MGC, AAA   2800/2800
(100 %)
3 diff
(99.9 %id)
BE783263 eye, retinoblastoma .b 588 to 1325 1 to 737   available from MGC,   737/739
(99 %)
9 diff
(98.8 %id)
AW997041 breast_normal .b 649 to 1195 1 to 546       546/546
(100 %)
3 diff
(99.5 %id)
DA350591 substantia nigra .b 698 to 1270 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DA736805   .b 734 to 1573 2 to 841   capped   840/841
(99 %)
4 diff
(99.6 %id)
DA730957   .b 742 to 1535 2 to 791   capped   790/791
(99 %)
10 diff
(98.8 %id)
BF766809 colon_est .b 799 to 1138 1 to 344       344/351
(98 %)
13 diff
(96.3 %id)
TI_891528382   .b 862 to 1907 12 to 1049       1038/1242
(83 %)
19 diff
(98.5 %id)
TI_891528388   .b 864 to 2011 12 to 1146       1137/1240
(91 %)
36 diff
(97.1 %id)
DA925670 small intestine .b 933 to 1516 2 to 585   capped   584/584
(100 %)
1 diff
(99.9 %id)
D17104   .b 949 to 1304 1 to 356       356/385
(92 %)
8 diff
(98.0 %id)
DA736351   .b 991 to 1831 2 to 843   capped   842/843
(99 %)
10 diff
(98.9 %id)
BU741585 eye, fetal eye .b 1016 to 1681 670 to 5   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 666/670
(99 %)
3 diff
(99.6 %id)
CB129435 cervix, Uterine .b 1120 to 1773 1 to 654       654/654
(100 %)
2 diff
(99.7 %id)
AK026978   .b 1132 to 3367 1 to 2236   available from FLJ, AAA   2236/2236
(100 %)
3 diff
(99.9 %id)
DA447224 tongue, tumor tissue .b 1137 to 1698 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
BC041662 Placenta, choriocarcinoma .b 1138 to 3366 1 to 2229   available from MGC, AAA   2229/2229
(100 %)
3 diff
(99.9 %id)
BI090118 cervix .b 1138 to 1904 1 to 780   available from MGC,   776/780
(99 %)
25 diff
(96.8 %id)
TI_891529218   .b 1144 to 2202 1079 to 21       1059/1268
(83 %)
8 diff
(99.4 %id)
TI_891529211   .b 1148 to 2202 1075 to 21       1055/1251
(84 %)
16 diff
(98.8 %id)
BM555965 amelanotic melanoma, cell line, skin .b 1150 to 2053 1 to 917       917/1095
(83 %)
26 diff
(97.7 %id)
AL603053 human skeletal muscle .b 1200 to 1768 1 to 569       569/569
(100 %)
1 diff
(99.9 %id)
DA998808 breast, tumor tissue .b 1211 to 1787 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DB020713 testis .b 1223 to 1788 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
TI_891528383   .b 1231 to 2417 12 to 1189       1181/1249
(94 %)
28 diff
(97.8 %id)
TI_891528377   .b 1234 to 2439 7 to 1210       1204/1273
(94 %)
28 diff
(97.9 %id)
DA572245 whole embryo, mainly body .b 1299 to 2079 2 to 776   capped   775/835
(92 %)
10 diff
(98.9 %id)
BM712870 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 1318 to 1702 394 to 10   AAA Submitted on the opposite strand 385/410
(93 %)
0 diff
(100 %id)
BY996379   .b 1333 to 1881 14 to 561       548/561
(97 %)
6 diff
(99.0 %id)
TI_891529217   .b 1389 to 2485 1104 to 6       1099/1238
(88 %)
17 diff
(98.7 %id)
DA828931 placenta .b 1402 to 2094 2 to 700   capped   699/753
(92 %)
14 diff
(98.2 %id)
AA320749 adipose tissue, white .b 1433 to 1670 1 to 239       239/239
(100 %)
1 diff
(99.6 %id)
TI_891529224   .b 1436 to 2476 1046 to 7       1040/1225
(84 %)
11 diff
(99.2 %id)
BG030824 breast, mammary adenocarcinoma, cell line .b 1523 to 2177 1 to 649       649/872
(74 %)
13 diff
(98.6 %id)
BI003087 head_normal .b 1562 to 1771 2 to 210       209/228
(91 %)
9 diff
(96.1 %id)
BG426396 Kidney .b 1562 to 2298 1 to 744       744/897
(82 %)
23 diff
(97.5 %id)
AA325670 brain, cerebellum .b 1582 to 1903 1 to 328       328/328
(100 %)
7 diff
(97.9 %id)
DA904507   .b 1631 to 2193 2 to 564   capped   563/563
(100 %)
2 diff
(99.7 %id)
TI_891528378   .b 1702 to 2828 27 to 1135       1111/1262
(88 %)
35 diff
(97.3 %id)
AV716187   .b 1705 to 2330 1 to 626       626/626
(100 %)
0 diff
(100 %id)
CK821194 Islets of Langerhans, Pancreas .b 1707 to 2320 1 to 614       614/614
(100 %)
0 diff
(100 %id)
BI962595 Islets of Langerhans, Pancreas .b 1723 to 2282 1 to 560       560/560
(100 %)
0 diff
(100 %id)
BI962772 Islets of Langerhans, Pancreas .b 1723 to 2288 1 to 566       566/566
(100 %)
0 diff
(100 %id)
CF138877 lymph .b 1790 to 2093 7 to 310       304/310
(98 %)
9 diff
(97.1 %id)
CF134720 CNCAP(3)T-225 cell line, Prostate .b 1790 to 2349 7 to 566       560/566
(98 %)
6 diff
(99.0 %id)
TI_154162742   .b 1790 to 2474 79 to 763       685/1115
(61 %)
6 diff
(99.5 %id)
TI_154168967   .b 1790 to 2307 78 to 601       524/537
(97 %)
25 diff
(95.4 %id)
TI_891529223   .b 1839 to 2902 1070 to 5       1066/1266
(84 %)
5 diff
(99.7 %id)
AW103462 ovary, tumor, 5 pooled (see description) .b 1862 to 2615 749 to 1       749/749
(100 %)
26 diff
(96.6 %id)
AA293258 ovarian tumor, ovary .b 1935 to 2308 1 to 374       374/374
(100 %)
0 diff
(100 %id)
DR762863 embryonic stem .b 1956 to 2749 1 to 794       794/794
(100 %)
2 diff
(99.8 %id)
TI_891528379   .b 1961 to 3149 5 to 1184       1180/1274
(92 %)
23 diff
(98.2 %id)
FN146929 breast carcinoma .b 1965 to 2037 1 to 73       73/74
(98 %)
3 diff
(96.0 %id)
FN121444 breast carcinoma .b 1969 to 2043 1 to 73       73/73
(100 %)
6 diff
(91.8 %id)
CB047289 Kidney .b 2048 to 2123 10 to 85       76/85
(89 %)
6 diff
(93.0 %id)
TI_891527644   .b 2076 to 3145 1132 to 61       1072/1263
(84 %)
20 diff
(98.5 %id)
TI_891527651   .b 2076 to 3154 1136 to 59       1078/1244
(86 %)
16 diff
(98.8 %id)
AL037661 brain .b 2078 to 2638 565 to 6       560/614
(91 %)
2 diff
(99.7 %id)
DB323621   .b 2078 to 2614 537 to 1       537/537
(100 %)
0 diff
(100 %id)
DB369110   .b 2078 to 2614 540 to 1       540/548
(98 %)
11 diff
(98.0 %id)
DB371845 ovary, tumor tissue .b 2078 to 2614 538 to 1       538/562
(95 %)
15 diff
(97.4 %id)
CD694553 normal nasopharynx .b 2100 to 2596 22 to 518       497/518
(95 %)
6 diff
(98.9 %id)
DB362978   .b 2110 to 2614 508 to 1       508/549
(92 %)
5 diff
(99.1 %id)
TI_891527643   .b 2131 to 3154 1075 to 62       1014/1234
(82 %)
17 diff
(98.7 %id)
AI620383 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .b 2143 to 2617 479 to 7   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 473/479
(98 %)
11 diff
(97.8 %id)
BF766883 colon_est .b 2146 to 2583 440 to 4     Submitted on the opposite strand 439/440
(99 %)
8 diff
(98.2 %id)
BM021394 Islets of Langerhans, Pancreas .b 2160 to 2719 1 to 560       560/560
(100 %)
2 diff
(99.7 %id)
AI862382 lymph node, lymphoma, follicular mixed small and largecell .b 2162 to 2638 507 to 31   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 477/507
(94 %)
14 diff
(97.3 %id)
DW444777 Liver .b 2256 to 2465 13 to 225       213/225
(94 %)
13 diff
(94.3 %id)
DW413341 Liver .b 2262 to 2565 17 to 320       304/320
(95 %)
6 diff
(98.2 %id)
DW445060 Liver .b 2262 to 2468 17 to 223       207/223
(92 %)
9 diff
(96.0 %id)
AI798349 ovary, tumor, 5 pooled (see description) .b 2285 to 2616 333 to 1       333/333
(100 %)
3 diff
(99.1 %id)
AA236833 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 2292 to 2725 1 to 433       433/433
(100 %)
2 diff
(99.6 %id)
CR616945 B cells (Ramos cell line) Cot 25-normalized .b 2308 to 4108 1 to 1801   tiling clone,   1801/1801
(100 %)
0 diff
(100 %id)
AL583360 B cells from Burkitt lymphoma .b 2308 to 3231 1 to 910   fully sequenced,   910/910
(100 %)
11 diff
(98.8 %id)
BE166243 head_neck .b 2343 to 2596 284 to 31     Submitted on the opposite strand 254/284
(89 %)
0 diff
(100 %id)
AI925345 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .b 2361 to 2618 258 to 1       258/258
(100 %)
0 diff
(100 %id)
CD678386 eye, Trabecular meshwork .b 2409 to 3051 1 to 643       643/644
(99 %)
3 diff
(99.6 %id)
TI_891528380   .b 2410 to 3154 22 to 766       745/1247
(59 %)
13 diff
(99.0 %id)
CN359947 embryonic stem cells, DMSO-treated H9 cellline .b 2475 to 3031 1 to 563       569/567
(100 %)
10 diff
(98.3 %id)
FN084270 breast carcinoma .b 2512 to 2610 98 to 1     Submitted on the opposite strand 98/98
(100 %)
2 diff
(98.0 %id)
FN140047 breast carcinoma .b 2543 to 2611 1 to 69       69/70
(98 %)
1 diff
(98.6 %id)
GD148584   .b 2552 to 2627 1 to 76   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 76/77
(98 %)
4 diff
(94.9 %id)
BG566525 Liver .b 2592 to 3226 1 to 637       637/809
(78 %)
8 diff
(99.1 %id)
BQ301299 bocio_tumor .b 2601 to 2881 297 to 15       283/297
(95 %)
0 diff
(100 %id)
TI_149274640   .b 2638 to 3366 837 to 112   AAA   726/952
(76 %)
9 diff
(99.1 %id)
CA423617 cell lines, Chondrosarcoma .b 2648 to 3367 738 to 19   AAA   720/720
(100 %)
5 diff
(99.4 %id)
CA310451 cell lines, Chondrosarcoma .b 2649 to 3367 736 to 19   AAA   718/718
(100 %)
3 diff
(99.6 %id)
BX111798 multiple sclerosis lesions .b 2653 to 3339 1 to 691       691/691
(100 %)
5 diff
(99.3 %id)
CN359954 embryonic stem cells, DMSO-treated H9 cellline .b 2663 to 3134 1 to 472       472/472
(100 %)
3 diff
(99.4 %id)
CB241922 Human Lung Epithelial cells, lung .b 2663 to 3367 723 to 19   AAA   705/705
(100 %)
3 diff
(99.6 %id)
CA426903 cell lines, Chondrosarcoma .b 2663 to 3367 723 to 19   AAA   705/705
(100 %)
2 diff
(99.8 %id)
BU676271 lung, Primary Lung Epithelial Cells .b 2693 to 3366 692 to 19   AAA   674/674
(100 %)
4 diff
(99.5 %id)
R53904 placenta .b 2704 to 2983 1 to 287   fully sequenced,   287/287
(100 %)
8 diff
(97.3 %id)
N48661 multiple sclerosis lesions .b 2749 to 2870 1 to 122       122/122
(100 %)
1 diff
(99.2 %id)
CK821193 Islets of Langerhans, Pancreas .b 2774 to 3368 595 to 1       595/595
(100 %)
0 diff
(100 %id)
BI789127 Islets of Langerhans, Pancreas .b 2779 to 3368 590 to 1       590/590
(100 %)
0 diff
(100 %id)
FN113830 breast carcinoma .b 2793 to 2892 1 to 100       100/101
(99 %)
1 diff
(99.1 %id)
R83133 breast .b 2806 to 3180 1 to 380       380/514
(73 %)
8 diff
(98.5 %id)
DB368820   .b 2816 to 3367 549 to 1       549/583
(94 %)
5 diff
(99.2 %id)
AI861798 2 pooled tumors (clear cell type), Kidney .b 2825 to 3366 552 to 11   AAA   542/542
(100 %)
1 diff
(99.9 %id)
CB047288 Kidney .b 2833 to 3366 566 to 33   AAA   534/534
(100 %)
3 diff
(99.5 %id)
TI_2194577219   .b 2836 to 3145 3 to 312       310/1269
(24 %)
7 diff
(99.5 %id)
DB359236 whole embryo, mainly body .b 2843 to 3367 524 to 1       524/525
(99 %)
4 diff
(99.3 %id)
BE464084 pooled germ cell tumors .b 2847 to 3367 521 to 1       521/521
(100 %)
0 diff
(100 %id)
BF447228 Prostate .b 2847 to 3368 524 to 3       522/524
(99 %)
0 diff
(100 %id)
TI_891528381   .b 2848 to 3154 14 to 319       306/1236
(24 %)
6 diff
(99.6 %id)
CN359953 embryonic stem cells, DMSO-treated H9 cellline .b 2858 to 3310 1 to 453       453/453
(100 %)
0 diff
(100 %id)
DB373556 placenta .b 2870 to 3371 502 to 1       502/533
(94 %)
19 diff
(96.5 %id)
AI798752 pooled .b 2879 to 3367 490 to 1       490/490
(100 %)
5 diff
(99.0 %id)
AW069200 bone marrow stroma .b 2881 to 3367 505 to 19   AAA   487/487
(100 %)
0 diff
(100 %id)
BQ002627 Chondrosarcoma, Left Pelvis .b 2881 to 3366 504 to 19   AAA   486/492
(98 %)
31 diff
(93.7 %id)
BE221656 malignant melanoma, metastatic to lymphnode, skin .b 2902 to 3368 468 to 2       467/468
(99 %)
0 diff
(100 %id)
BI789261 Islets of Langerhans, Pancreas .b 2902 to 3368 467 to 1       467/467
(100 %)
0 diff
(100 %id)
AW974360   .b 2903 to 3360 110 to 567       458/568
(80 %)
1 diff
(99.9 %id)
AI523681 Prostate .b 2903 to 3368 469 to 4       466/469
(99 %)
0 diff
(100 %id)
AI580093 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 2903 to 3366 464 to 1       464/464
(100 %)
0 diff
(100 %id)
BF095384 uterus_tumor .b 2908 to 3362 466 to 12       455/470
(96 %)
0 diff
(100 %id)
AW235393 pooled germ cell tumors .b 2908 to 3367 460 to 1       460/461
(99 %)
2 diff
(99.6 %id)
BQ002175 Chondrosarcoma, Left Pelvis .b 2915 to 3367 464 to 12   AAA   453/453
(100 %)
1 diff
(99.8 %id)
FN124321 breast carcinoma .b 2925 to 2993 1 to 68       68/69
(98 %)
2 diff
(97.2 %id)
AI753518 bone marrow stroma .b 2930 to 3367 464 to 27   AAA   438/438
(100 %)
0 diff
(100 %id)
AW190666 adenocarcinoma, Pancreas .b 2930 to 3366 440 to 3       438/440
(99 %)
0 diff
(100 %id)
BG231878 blood, lymphocyte .b 2934 to 3366 433 to 1       433/433
(100 %)
0 diff
(100 %id)
FN149865 breast carcinoma .b 2939 to 2991 51 to 1     Submitted on the opposite strand 51/51
(100 %)
2 diff
(96.1 %id)
AA639249 Ewing's sarcoma .b 2940 to 3314 375 to 1       375/375
(100 %)
1 diff
(99.8 %id)
AI683733 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 2947 to 3368 428 to 7       422/428
(98 %)
0 diff
(100 %id)
R53905 placenta .b 2953 to 3367 429 to 1   fully sequenced,   429/429
(100 %)
19 diff
(95.6 %id)
AW512450 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 2957 to 3368 412 to 1       412/412
(100 %)
0 diff
(100 %id)
AA713496 germinal center B cell .b 2961 to 3366 430 to 25   AAA   406/406
(100 %)
0 diff
(100 %id)
AA236786 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 2976 to 3367 418 to 27   AAA   392/392
(100 %)
0 diff
(100 %id)
FN123924 breast carcinoma .b 3011 to 3111 94 to 1     Submitted on the opposite strand 94/95
(98 %)
7 diff
(92.7 %id)
DB369370   .b 3020 to 3367 348 to 1       348/350
(99 %)
0 diff
(100 %id)
CD240296   .b 3037 to 3366 53 to 384       332/386
(86 %)
3 diff
(99.3 %id)
AI624885 pooled germ cell tumors .b 3041 to 3366 326 to 1       326/326
(100 %)
0 diff
(100 %id)
BE550345 pooled germ cell tumors .b 3041 to 3366 326 to 1       326/326
(100 %)
0 diff
(100 %id)
AI344337 colon, colon tumor, RER+ .b 3046 to 3366 341 to 21   AAA   321/322
(99 %)
4 diff
(98.8 %id)
N34426 multiple sclerosis lesions .b 3050 to 3367 321 to 1       321/321
(100 %)
4 diff
(98.8 %id)
AI343456 colon, colon tumor, RER+ .b 3050 to 3366 337 to 21   AAA   317/319
(99 %)
1 diff
(99.7 %id)
BE930159 placenta_normal .b 3061 to 3332 6 to 285       280/285
(98 %)
6 diff
(97.9 %id)
AA744955 breast .b 3076 to 3366 295 to 5       291/295
(98 %)
0 diff
(100 %id)
AA905856 pooled .b 3115 to 3368 256 to 3       254/256
(99 %)
0 diff
(100 %id)
AI928290 2 pooled tumors (clear cell type), Kidney .b 3119 to 3368 253 to 3       251/478
(52 %)
0 diff
(100 %id)
FN092735 breast carcinoma .b 3129 to 3260 142 to 1     Submitted on the opposite strand 142/145
(97 %)
15 diff
(89.7 %id)
AI540537 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 3192 to 3368 180 to 4       177/180
(98 %)
0 diff
(100 %id)
AL583305 B cells from Burkitt lymphoma .b 3201 to 4099 899 to 10   fully sequenced,   890/899
(98 %)
21 diff
(97.7 %id)
FN080602 breast carcinoma .b 3567 to 3641 1 to 74       74/75
(98 %)
4 diff
(94.7 %id)
FN053719 breast carcinoma .b 4003 to 4115 1 to 113   tiling clone,   113/113
(100 %)
0 diff
(100 %id)
DB479606 hippocampus .c 1 to 485 1 to 485   tiling clone,   485/495
(97 %)
5 diff
(99.0 %id)
BX443173.
matches multiple genes
B cells (Ramos cell line) .c 74 to 934 1 to 859     also hits gene slyner, TDG 859/859
(100 %)
3 diff
(99.7 %id)
NM_152520.4   .c 74 to 3350 1 to 3277 exact RefSeq, AAA   3277/3277
(100 %)
0 diff
(100 %id)
DA993893 synovial membrane tissue from rheumatioidarthritis .c 193 to 702 2 to 512   capped   511/511
(100 %)
3 diff
(99.5 %id)
CD244390 testis .c 232 to 934 1 to 703       703/871
(80 %)
7 diff
(99.2 %id)
BC092423 testis .c 239 to 3350 1 to 3111 exact tiling clone, AAA   3111/3111
(100 %)
1 diff
(100.0 %id)
BI547494 brain, hippocampus .c 254 to 819 1 to 566       566/566
(100 %)
11 diff
(98.1 %id)
BC033042 Brain, hippocampus .c 254 to 3350 1 to 3096 N69T G70A K71N S72P H73T ... AAA   3096/3096
(100 %)
12 diff
(99.7 %id)
BI548287 brain, hippocampus .c 254 to 909 1 to 656       656/656
(100 %)
10 diff
(98.5 %id)
AK131432 synovial membrane tissue from rheumatioidarthritis .c 259 to 1843 1 to 1585   available from FLJ,   1585/1687
(93 %)
3 diff
(99.9 %id)
TI_44168283   .c 259 to 819 84 to 644       561/644
(87 %)
11 diff
(98.3 %id)
TI_44168491   .c 259 to 909 88 to 738       651/738
(88 %)
11 diff
(98.6 %id)
DA125647 cerebellum .c 260 to 826 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA988245 synovial membrane tissue from rheumatioidarthritis .c 260 to 819 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA995366 synovial membrane tissue from rheumatioidarthritis .c 260 to 777 2 to 519   capped   518/518
(100 %)
0 diff
(100 %id)
DA995841 synovial membrane tissue from rheumatioidarthritis .c 260 to 786 2 to 533   capped   532/532
(100 %)
6 diff
(98.9 %id)
DB074930 testis .c 260 to 805 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DB076505 testis .c 260 to 835 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DB084251 testis .c 260 to 799 2 to 542   capped   541/541
(100 %)
2 diff
(99.7 %id)
DB085865 testis .c 260 to 828 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DB094698 testis .c 260 to 811 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DR004973 placenta .c 268 to 1061 1 to 794       794/794
(100 %)
3 diff
(99.7 %id)
DR005227 Prostate .c 552 to 1184 1 to 637       637/671
(94 %)
4 diff
(99.5 %id)
BI822395 pooled brain, lung, testis .c 928 to 1697 9 to 775       769/777
(98 %)
9 diff
(98.9 %id)
TI_57200316   .c 928 to 1697 42 to 808       767/810
(94 %)
9 diff
(98.9 %id)
CV030345 mixed .c 984 to 1493 1 to 512       512/512
(100 %)
14 diff
(97.3 %id)
TI_1948092429   .c 984 to 1705 126 to 850   fully sequenced,   725/850
(85 %)
12 diff
(98.6 %id)
TI_1948092558   .c 984 to 1557 129 to 702   fully sequenced,   574/702
(81 %)
6 diff
(99.2 %id)
TI_1948092709   .c 984 to 1594 128 to 738       611/1170
(52 %)
7 diff
(99.5 %id)
TI_1948092864   .c 985 to 1572 125 to 712   fully sequenced,   588/712
(82 %)
8 diff
(98.9 %id)
DA825432 pericardium .c 1021 to 1592 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
AI590351 Kidney .c 1034 to 1506 474 to 1       474/474
(100 %)
4 diff
(99.2 %id)
BM710826 eye, fetal eyes .c 1107 to 1598 1 to 492       492/492
(100 %)
0 diff
(100 %id)
AA017473 eye, retina .c 1119 to 1489 1 to 380       380/380
(100 %)
24 diff
(93.7 %id)
AA053987 eye, retina .c 1185 to 1487 24 to 330       308/354
(87 %)
14 diff
(96.1 %id)
BG427553 Kidney .c 1350 to 2120 1 to 764       764/764
(100 %)
30 diff
(96.1 %id)
BF812973 colon_ins .c 1352 to 1802 452 to 2     Submitted on the opposite strand 451/452
(99 %)
6 diff
(98.7 %id)
EC551846 Prostate .c 1359 to 1444 1 to 85       85/85
(100 %)
1 diff
(98.9 %id)
BF093607 testis_normal .c 1382 to 1926 1 to 545       545/545
(100 %)
4 diff
(99.3 %id)
DB210089 trachea .c 1424 to 1937 2 to 515   capped   514/514
(100 %)
1 diff
(99.9 %id)
TI_1948092559   .c 1527 to 2092 693 to 124   fully sequenced,   570/693
(82 %)
0 diff
(100 %id)
TI_1948092865   .c 1542 to 2091 677 to 125   fully sequenced,   553/677
(81 %)
1 diff
(99.9 %id)
R13916 whole brain .c 1559 to 1790 1 to 231       231/242
(95 %)
1 diff
(99.6 %id)
TI_1948092710   .c 1592 to 2092 630 to 129       502/1360
(36 %)
1 diff
(100.0 %id)
F08554 brain, total brain .c 1625 to 1818 1 to 193       193/193
(100 %)
5 diff
(97.5 %id)
TI_1948092430   .c 1675 to 2092 551 to 129   fully sequenced,   423/551
(76 %)
3 diff
(99.5 %id)
CX755536 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .c 1790 to 2499 1 to 709     Submitted on the opposite strand 709/710
(99 %)
3 diff
(99.6 %id)
R67308 whole brain .c 1797 to 2183 1 to 392       392/474
(82 %)
15 diff
(96.9 %id)
AI039200   .c 2138 to 2395 258 to 1   tiling clone,   258/258
(100 %)
0 diff
(100 %id)
BQ638437 eye, retina .c 2225 to 2841 1 to 617       617/617
(100 %)
0 diff
(100 %id)
CB161541 Liver .c 2384 to 2913 1 to 529       529/529
(100 %)
5 diff
(99.1 %id)
BM700771 eye, human retina .c 2421 to 2962 9 to 550       542/550
(98 %)
6 diff
(99.0 %id)
AI536110 Prostate .c 2453 to 2795 37 to 379     Submitted on the opposite strand 343/610
(56 %)
9 diff
(98.6 %id)
TI_154010715   .c 2791 to 3361 704 to 125       580/1415
(40 %)
0 diff
(100 %id)
BM667663 eye, fetal eyes .c 2810 to 3357 559 to 12   AAA   548/548
(100 %)
0 diff
(100 %id)
AI694320 pooled .c 2814 to 3365 561 to 10       552/561
(98 %)
0 diff
(100 %id)
TI_151742652   .c 2826 to 3361 667 to 131       537/670
(80 %)
0 diff
(100 %id)
AW511452 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .c 2837 to 3358 522 to 1       522/522
(100 %)
1 diff
(99.9 %id)
AA017474 eye, retina .c 2899 to 3358 465 to 1       465/468
(99 %)
6 diff
(98.8 %id)
BM993968 lung, Metastatic Chondrosarcoma .c 2899 to 3357 476 to 19   AAA   458/458
(100 %)
5 diff
(99.0 %id)
AA430313.
matches multiple genes
  .c 2900 to 3342 1 to 443     also hits gene ARID2 443/443
(100 %)
3 diff
(99.4 %id)
CN293981 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c 2907 to 3360 1 to 454       454/454
(100 %)
0 diff
(100 %id)
AA889698   .c 2907 to 3351 456 to 12       445/456
(97 %)
0 diff
(100 %id)
BF092867 testis_normal .c 2909 to 3232 1 to 325       325/325
(100 %)
10 diff
(97.0 %id)
AI310964 2 pooled tumors (clear cell type), Kidney .c 2917 to 3357 457 to 17   AAA   441/441
(100 %)
3 diff
(99.4 %id)
AA664105 lung .c 2950 to 3358 409 to 1       409/409
(100 %)
0 diff
(100 %id)
AA046448 eye, retina .c 2957 to 3358 403 to 1       403/405
(99 %)
1 diff
(99.8 %id)
AI588844 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .c 2961 to 3361 406 to 6       401/406
(98 %)
0 diff
(100 %id)
CA435706 lung, Metastatic Chondrosarcoma .c 2962 to 3357 414 to 19   AAA   396/396
(100 %)
2 diff
(99.5 %id)
T15889   .c 2974 to 3357 384 to 1       384/384
(100 %)
5 diff
(98.7 %id)
AI621129 Prostate .c 2980 to 3357 378 to 1       378/378
(100 %)
0 diff
(100 %id)
AA770354   .c 3002 to 3360 359 to 1       359/359
(100 %)
0 diff
(100 %id)
AW949272 prostate_tumor .c 3004 to 3220 222 to 1     Submitted on the opposite strand 222/239
(92 %)
15 diff
(93.8 %id)
AA743790 Kidney .c 3008 to 3361 358 to 5   tiling clone,   354/358
(98 %)
0 diff
(100 %id)
R60887 whole brain .c 3010 to 3361 359 to 5       355/433
(81 %)
0 diff
(100 %id)
AI051740   .c 3046 to 3361 319 to 4       316/319
(99 %)
0 diff
(100 %id)
Z41521 brain, total brain .c 3124 to 3350 227 to 1       227/227
(100 %)
0 diff
(100 %id)
DA042889 bladder .d 1 to 456 2 to 458   tiling clone, capped   457/457
(100 %)
3 diff
(99.4 %id)
AK123647 brain .d 90 to 2325 1 to 2236 R264K S295R K403E tiling clone, available from FLJ,   2236/2236
(100 %)
4 diff
(99.9 %id)
DA531654 brain .d 91 to 697 2 to 607   capped   606/606
(100 %)
1 diff
(99.9 %id)
DB041903 testis .d 110 to 691 2 to 583   capped   582/582
(100 %)
2 diff
(99.7 %id)
DB317715 brain .d 1801 to 2325 525 to 1       525/525
(100 %)
5 diff
(99.1 %id)
AK096822 Prostate .e 1 to 2749 2 to 2749 A339S tiling clone, available from FLJ,   2749/2749
(100 %)
5 diff
(99.9 %id)
NM_001113397.1   .e 1 to 2749 2 to 2750 exact RefSeq, AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 2750/2750
(100 %)
0 diff
(100 %id)
DA878366 Prostate .e 1 to 570 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA157737 amygdala .e 183 to 763 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DB330235 Prostate .e 2214 to 2747 538 to 3       536/538
(99 %)
0 diff
(100 %id)
BC038422 Brain, adult medulla .f 1 to 2123 6 to 2127 exact tiling clone, available from MGC, AAA   2127/2127
(100 %)
2 diff
(100.0 %id)
TI_57171991   .f 1 to 901 33 to 931   AAA   904/970
(93 %)
28 diff
(97.2 %id)
BI827750 brain, medulla .f 5 to 901 8 to 901       894/949
(94 %)
28 diff
(97.1 %id)
NM_001113398.1   .g 1 to 2610 1 to 2610 exact RefSeq, AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 2610/2610
(100 %)
0 diff
(100 %id)
BP342688 stomach mucosa .g 1 to 584 1 to 584   tiling clone,   584/584
(100 %)
0 diff
(100 %id)
BI818920 pooled brain, lung, testis .g 17 to 746 1 to 741   tiling clone,   741/930
(79 %)
27 diff
(97.1 %id)
TI_57199899   .g 17 to 746 35 to 775       741/964
(76 %)
31 diff
(96.8 %id)
DN996310 breast cancer, Mammary gland (cancer tissue) .g 76 to 706 1 to 632   tiling clone,   632/632
(100 %)
6 diff
(99.1 %id)
BP349071 brain .g 80 to 659 1 to 581   tiling clone,   581/581
(100 %)
1 diff
(99.9 %id)
AA336503 endometrium .g 91 to 374 1 to 284       284/286
(99 %)
1 diff
(99.7 %id)
DB074961 testis .h 1 to 522 2 to 523   tiling clone, capped   522/522
(100 %)
0 diff
(100 %id)
TI_2194575851   .h 222 to 1415 58 to 1238   tiling clone, Submitted on the opposite strand 1181/1260
(93 %)
33 diff
(97.4 %id)
TI_2194575853   .h 222 to 1375 63 to 1197     Submitted on the opposite strand 1135/1268
(89 %)
35 diff
(97.3 %id)
TI_2194576425   .h 222 to 1357 62 to 1178   tiling clone, Submitted on the opposite strand 1098/1275
(86 %)
24 diff
(98.2 %id)
BC143433 Brain, cerebellum, PCR rescued clones .h 223 to 2761 1 to 2539 exact tiling clone,   2539/2539
(100 %)
4 diff
(99.9 %id)
TI_2194577220   .h 719 to 1845 12 to 1125       1114/1253
(88 %)
26 diff
(98.0 %id)
TI_2194577215   .h 1085 to 2147 10 to 1073       1064/1271
(83 %)
14 diff
(98.9 %id)
DA571946 whole embryo, mainly body .h 1472 to 2272 2 to 796   capped   795/850
(93 %)
14 diff
(98.4 %id)
TI_2194575849   .h 1641 to 2761 1173 to 56     Submitted on the opposite strand 1118/1267
(88 %)
14 diff
(98.9 %id)
TI_2194577216   .h 1641 to 2765 28 to 1144       1119/1252
(89 %)
22 diff
(98.3 %id)
TI_2194575847   .h 1647 to 2761 1163 to 58     Submitted on the opposite strand 1106/1274
(86 %)
14 diff
(99.0 %id)
TI_2194577217   .h 1905 to 2761 1 to 857       857/1233
(69 %)
9 diff
(99.3 %id)
DB358883 whole embryo, mainly body .h 2443 to 2983 537 to 1   tiling clone,   537/540
(99 %)
8 diff
(98.6 %id)
AA460775   .i 1 to 440 1 to 439   tiling clone,   439/439
(100 %)
1 diff
(99.8 %id)
AA447217   .i 538 to 925 394 to 7   tiling clone,   388/394
(98 %)
0 diff
(100 %id)
AA460346   .i 586 to 863 280 to 3       278/280
(99 %)
0 diff
(100 %id)
BU570367 testis .j 1 to 650 1 to 661 T38I F91L N92* tiling clone, AAA   661/825
(80 %)
31 diff
(96.3 %id)
TI_149286771   .j 172 to 770 691 to 93   tiling clone, AAA   599/1128
(53 %)
0 diff
(100 %id)
BU681048 lung .j 189 to 770 600 to 19   AAA   582/582
(100 %)
0 diff
(100 %id)
DB057089 testis .k 1 to 533 2 to 534 exact tiling clone, capped   533/533
(100 %)
0 diff
(100 %id)
DA157085 amygdala .l 1 to 552 2 to 553 P130S S131F tiling clone, capped   552/552
(100 %)
2 diff
(99.7 %id)
BF540965 hypernephroma, Kidney .m 1 to 618 1 to 616 L24S P26Q N27I F28L N29T ... tiling clone,   616/686
(89 %)
8 diff
(98.9 %id)
DB013799 esophageal, tumor tissue .n-u 1 to 567 2 to 568   tiling clone, capped   567/567
(100 %)
0 diff
(100 %id)
BF958803 nervous_normal .n-u 349 to 728 30 to 409   tiling clone,   380/410
(92 %)
21 diff
(94.9 %id)
BF960332 nervous_normal .n-u 349 to 634 33 to 318       286/318
(89 %)
9 diff
(97.2 %id)
CV425473 nervous_normal .n-u 353 to 727 1 to 374       374/374
(100 %)
23 diff
(93.9 %id)
BF960334 nervous_normal .n-u 361 to 634 1 to 274       274/274
(100 %)
3 diff
(99.0 %id)
BF960349 nervous_normal .n-u 361 to 631 1 to 271       271/272
(99 %)
8 diff
(97.1 %id)
CV425468 nervous_normal .n-u 400 to 728 15 to 344       330/344
(95 %)
6 diff
(98.3 %id)
BF958781 nervous_normal .n-u 470 to 840 371 to 1   tiling clone,   371/371
(100 %)
3 diff
(99.2 %id)
BF958792 nervous_normal .n-u 473 to 840 368 to 1       368/370
(99 %)
7 diff
(98.2 %id)
BF958797 nervous_normal .n-u 473 to 840 370 to 1       370/371
(99 %)
15 diff
(96.0 %id)
BF958799 nervous_normal .n-u 473 to 840 368 to 1       368/370
(99 %)
3 diff
(99.2 %id)
BF958796 nervous_normal .n-u 474 to 840 367 to 1       367/367
(100 %)
3 diff
(99.2 %id)
BF958807 nervous_normal .n-u 474 to 840 367 to 1       367/367
(100 %)
3 diff
(99.2 %id)
CV425459 nervous_normal .n-u 515 to 840 326 to 1     Submitted on the opposite strand 326/327
(99 %)
5 diff
(98.5 %id)
BF960344 nervous_normal .n-u 570 to 840 271 to 1       271/271
(100 %)
2 diff
(99.3 %id)
CV425432 nervous_normal .n-u 570 to 813 292 to 49     Submitted on the opposite strand 244/293
(83 %)
0 diff
(100 %id)
BQ378824 uterus_tumor .n-u 673 to 940 1 to 266       266/266
(100 %)
14 diff
(94.8 %id)
BF907467 uterus_tumor .n-u 739 to 949 1 to 212       212/218
(97 %)
13 diff
(94.1 %id)
DA569275 whole embryo, mainly head .n-u 836 to 1618 2 to 783 exact tiling clone, capped   782/782
(100 %)
4 diff
(99.5 %id)
BM930713 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .n-u 1523 to 2209 1 to 687   tiling clone,   687/687
(100 %)
0 diff
(100 %id)
BU632108 cell lines, Chondrosarcoma .n-u 1626 to 2333 719 to 12   tiling clone, AAA   708/708
(100 %)
0 diff
(100 %id)
BM991173 lung, Lung Focal Fibrosis .n-u 1629 to 2333 723 to 19   AAA   705/705
(100 %)
0 diff
(100 %id)
BQ188876 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .n-u 1718 to 2333 1 to 616   AAA   616/616
(100 %)
0 diff
(100 %id)
TI_151733652   .n-u 1718 to 2333 689 to 74   AAA   616/981
(62 %)
0 diff
(100 %id)
DB335399 esophageal, tumor tissue .n-u 1824 to 2333 510 to 1       510/511
(99 %)
0 diff
(100 %id)
DB355891 whole embryo, mainly head .n-u 1849 to 2333 509 to 27   AAA   483/507
(95 %)
8 diff
(98.5 %id)
BC048123 testis .o -9 to 1884 1 to 1894 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 1894/1894
(100 %)
2 diff
(99.9 %id)
BI462129 testis .o 33 to 746 47 to 759   available from MGC,   759/759
(100 %)
11 diff
(98.6 %id)
R07552 liver and spleen .p 1 to 325 1 to 332 D6N tiling clone,   332/395
(84 %)
10 diff
(97.5 %id)
T84526 liver and spleen .p 24 to 404 1 to 387   tiling clone,   387/414
(93 %)
5 diff
(98.8 %id)
T91378 liver and spleen .p 440 to 886 457 to 1   tiling clone,   457/457
(100 %)
10 diff
(97.9 %id)
H81619 eye, retina .q -8 to 372 1 to 379   tiling clone,   377/412
(91 %)
10 diff
(97.6 %id)
H81620 eye, retina .q 430 to 816 389 to 1   tiling clone,   389/394
(98 %)
2 diff
(99.5 %id)
DB100582 testis .r 1 to 584 16 to 599 exact tiling clone, capped   589/589
(100 %)
0 diff
(100 %id)
DA863539 placenta .s 1 to 564 2 to 565 exact tiling clone, capped   564/564
(100 %)
0 diff
(100 %id)
BU656617 blood .t-u 1 to 523 1 to 522 D2A R3G K4E tiling clone,   522/522
(100 %)
8 diff
(98.5 %id)
AA322383 brain, cerebellum .u 1 to 227 1 to 227 exact tiling clone,   227/227
(100 %)
0 diff
(100 %id)
AK057999 stomach mucosa Gene CWC22andZNF385B, variant not shown       available from FLJ, Suspected internal deletion, this clone was ignored    
TI_891527652   Gene CWC22andZNF385B, variant not shown         Suspected internal deletion, this clone was ignored    
TI_2194576043   Gene CWC22andZNF385B, variant not shown         Submitted on the opposite strand    
DB295924 bladder Gene CWC22andZNF385B, variant not shown         This clone was ignored    
DA039766 bladder Gene CWC22andZNF385B, variant not shown       capped This clone was ignored    
BQ319329 colon Gene CWC22andZNF385B, variant not shown         Suspected internal deletion, this clone was ignored    
DB301395 amygdala Gene CWC22andZNF385B, variant not shown              
DA144743 amygdala Gene CWC22andZNF385B, variant not shown       capped      
BX117000   Gene CWC22andZNF385B, variant not shown              
BX951635   Gene CWC22andZNF385B, variant not shown              
FN122149 breast carcinoma Gene CWC22andZNF385B, variant not shown              
AV658247 corresponding non cancerous liver tissue Gene CWC22andZNF385B, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
AV658344 corresponding non cancerous liver tissue Gene CWC22andZNF385B, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
AI949292 2 pooled tumors (clear cell type), Kidney Gene CWC22andZNF385B, variant not shown              
BG618485 Liver Gene CWC22andZNF385B, variant not shown         Suspected internal deletion, this clone was ignored    
DB370479   Gene CWC22andZNF385B, variant not shown         This clone was ignored    
DA737858   Gene CWC22andZNF385B, variant not shown       capped This clone was ignored    
DB140220 thymus Gene CWC22andZNF385B, variant not shown       capped Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n-u, .o, .p, .q, .r, .s, .t-u, .u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI