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Gene KIAA1543TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
138 supporting clones for gene KIAA1543 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BM908041 brain, medulla .a 1 to 625 70 to 700   tiling clone, available from MGC,   631/1279
(49 %)
20 diff
(98.5 %id)
NM_001080429.2   .a 5 to 4187 1 to 4183   RefSeq, AAA   4183/4183
(100 %)
0 diff
(100 %id)
BC020431 Eye, retinoblastoma .a 162 to 3982 1 to 3821   tiling clone, available from MGC,   3821/3821
(100 %)
1 diff
(100.0 %id)
BX420796 brain, fetal brain .a 194 to 1086 1 to 892       786/892
(88 %)
46 diff
(94.9 %id)
BM729108 eye, fetal eye .a 569 to 1130 1 to 561       561/561
(100 %)
2 diff
(99.7 %id)
BX431675 brain, fetal brain .a 839 to 1717 1 to 883       883/887
(99 %)
18 diff
(98.0 %id)
CN429333 embryonic stem cells, cell lines H1, H7, andH9 .a 1091 to 1405 1 to 314       314/314
(100 %)
1 diff
(99.7 %id)
AB040976   .a 1183 to 3982 1 to 2800   available from KIAA,   2800/2800
(100 %)
0 diff
(100 %id)
BI522441 brain .a 1194 to 1493 1 to 302       302/571
(52 %)
3 diff
(99.5 %id)
TI_44185012   .a 1194 to 1493 29 to 330       302/599
(50 %)
9 diff
(98.5 %id)
CN429334 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 1262 to 1585 1 to 325       325/325
(100 %)
3 diff
(99.1 %id)
AL833927 testis .a 1403 to 3974 1 to 2572   available from DKFZ,   2572/2572
(100 %)
0 diff
(100 %id)
CN429335 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 1496 to 1705 1 to 209       209/209
(100 %)
3 diff
(98.6 %id)
CD579739 brain .a 1565 to 2226 1 to 662       662/664
(99 %)
14 diff
(97.9 %id)
BM174895 hippocampus .a 1746 to 2277 7 to 538       532/538
(98 %)
6 diff
(98.9 %id)
AF289580   .a 2137 to 4181 1 to 2049   AAA   2049/2049
(100 %)
4 diff
(99.9 %id)
BM843475 lymph node, stomach .a 2154 to 2672 1 to 519       519/519
(100 %)
5 diff
(99.1 %id)
BM845398 lymph node, stomach .a 2154 to 2565 1 to 412       412/412
(100 %)
2 diff
(99.6 %id)
BI761904 pooled colon, kidney, stomach .a 2478 to 3334 1 to 855       855/855
(100 %)
7 diff
(99.2 %id)
TI_57150960   .a 2478 to 3334 39 to 893       855/893
(95 %)
13 diff
(98.6 %id)
CX784649 human embryonic stem cells .a 2590 to 3397 1 to 808       808/808
(100 %)
1 diff
(99.9 %id)
CA394401 eye, RPE/choroid .a 2616 to 3194 1 to 579       579/579
(100 %)
0 diff
(100 %id)
BM552887 brain, medulla .a 2634 to 3384 14 to 771       758/1152
(65 %)
27 diff
(97.7 %id)
CD672449 eye, Iris .a 2869 to 3389 1 to 521       521/521
(100 %)
0 diff
(100 %id)
CN429332 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 2936 to 3677 1 to 742       742/742
(100 %)
3 diff
(99.6 %id)
BI523008 brain .a 3196 to 3973 800 to 1       800/801
(99 %)
39 diff
(95.2 %id)
TI_44185013   .a 3196 to 3982 849 to 42       808/850
(95 %)
31 diff
(96.4 %id)
BM824663 Ascites, stomach .a 3221 to 3718 1 to 498       498/498
(100 %)
0 diff
(100 %id)
R64275 placenta .a 3231 to 3603 1 to 379   fully sequenced,   379/379
(100 %)
20 diff
(94.8 %id)
BM705294 eye, RPE and Choroid .a 3233 to 3734 1 to 502       502/503
(99 %)
1 diff
(99.9 %id)
BX281097 eye, retinoblastoma .a 3273 to 3703 1 to 431       431/431
(100 %)
0 diff
(100 %id)
BE782816 eye, retinoblastoma .a 3293 to 3939 1 to 644       644/653
(98 %)
5 diff
(99.3 %id)
BF803796 colon_ins .a 3399 to 3680 293 to 13     Submitted on the opposite strand 281/293
(95 %)
1 diff
(99.7 %id)
BF062442 colon, colon tumor, RER+ .a 3415 to 3931 517 to 1       517/517
(100 %)
0 diff
(100 %id)
BF195795 Kidney .a 3415 to 3980 566 to 1       566/566
(100 %)
0 diff
(100 %id)
TI_151713432   .a 3444 to 3982 626 to 85       542/905
(59 %)
5 diff
(99.5 %id)
BE222659 brain, oligodendroglioma .a 3445 to 3890 446 to 1       446/446
(100 %)
0 diff
(100 %id)
W67898 heart .a 3446 to 3962 1 to 511   fully sequenced,   511/511
(100 %)
10 diff
(98.1 %id)
AA868472   .a 3449 to 3908 457 to 1       457/457
(100 %)
3 diff
(99.4 %id)
BF196407 Kidney .a 3451 to 3973 522 to 1       522/522
(100 %)
4 diff
(99.3 %id)
AA633161 colon, colon tumor RER+ .a 3471 to 3929 459 to 1       459/459
(100 %)
4 diff
(99.2 %id)
AI149820   .a 3476 to 3929 454 to 1       454/454
(100 %)
0 diff
(100 %id)
BM709565 eye, optic nerve .a 3476 to 3859 1 to 384   fully sequenced,   384/384
(100 %)
0 diff
(100 %id)
BF063060 colon, colon tumor, RER+ .a 3478 to 3929 452 to 1       452/452
(100 %)
1 diff
(99.8 %id)
BM682037 eye, fetal eye .a 3480 to 4181 713 to 13   AAA   701/701
(100 %)
1 diff
(99.9 %id)
BC128201 PCR rescued clones .a 3487 to 4030 1 to 544       544/545
(99 %)
8 diff
(98.6 %id)
BC128202 PCR rescued clones .a 3487 to 4030 1 to 544       544/545
(99 %)
8 diff
(98.6 %id)
AI935119 2 pooled tumors (clear cell type), Kidney .a 3489 to 3929 441 to 1       441/441
(100 %)
2 diff
(99.6 %id)
CD672448 eye, Iris .a 3490 to 3974 485 to 1       485/485
(100 %)
0 diff
(100 %id)
AI816707 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .a 3492 to 3929 439 to 1       439/439
(100 %)
2 diff
(99.6 %id)
AW007601 colon .a 3496 to 3939 444 to 1       444/444
(100 %)
3 diff
(99.4 %id)
AW665069 pooled .a 3496 to 3929 434 to 1       434/434
(100 %)
0 diff
(100 %id)
AI191786   .a 3501 to 3929 429 to 1       429/429
(100 %)
4 diff
(99.1 %id)
AI681164 carcinoid, lung .a 3501 to 3929 429 to 1       429/429
(100 %)
0 diff
(100 %id)
AI970053 Prostate .a 3502 to 3929 428 to 1       428/428
(100 %)
0 diff
(100 %id)
TI_151701188   .a 3502 to 3982 562 to 82       481/1069
(44 %)
0 diff
(100 %id)
AI393938 B-cell, chronic lymphotic leukemia .a 3503 to 3957 455 to 1       455/455
(100 %)
0 diff
(100 %id)
BM703245 eye, human retina .a 3503 to 3974 1 to 472       472/472
(100 %)
1 diff
(99.8 %id)
H28001 breast .a 3510 to 3890 386 to 1       386/429
(89 %)
14 diff
(96.8 %id)
AW271477 Kidney .a 3510 to 3929 420 to 1       420/425
(98 %)
2 diff
(99.6 %id)
AW779770 Kidney .a 3512 to 3929 419 to 1       419/434
(96 %)
8 diff
(98.2 %id)
AI886383 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 3518 to 3950 433 to 1       433/437
(99 %)
12 diff
(97.3 %id)
AA973613 carcinoid, lung .a 3520 to 3954 438 to 3       436/438
(99 %)
2 diff
(99.6 %id)
AI272704 adenocarcinoma, colon .a 3522 to 3929 408 to 1       408/408
(100 %)
0 diff
(100 %id)
AI199566 anaplastic oligodendroglioma, brain .a 3524 to 3929 406 to 1       406/406
(100 %)
2 diff
(99.6 %id)
AA446272   .a 3526 to 3888 1 to 363   fully sequenced,   363/363
(100 %)
0 diff
(100 %id)
AI285089 adenocarcinoma, colon .a 3533 to 3957 425 to 1       425/425
(100 %)
0 diff
(100 %id)
AI222838 adenocarcinoma, colon .a 3535 to 3964 430 to 1       430/430
(100 %)
0 diff
(100 %id)
AI214265 adenocarcinoma, colon .a 3535 to 3929 395 to 1       395/395
(100 %)
2 diff
(99.5 %id)
BF434805 Kidney .a 3536 to 3730 195 to 1       195/196
(99 %)
6 diff
(97.0 %id)
W67595 heart .a 3556 to 3929 372 to 1   fully sequenced,   372/372
(100 %)
3 diff
(99.2 %id)
BG057064 anaplastic oligodendroglioma, brain .a 3556 to 3973 418 to 1       418/418
(100 %)
6 diff
(98.6 %id)
AA338275 brain .a 3559 to 3802 1 to 244       244/244
(100 %)
1 diff
(99.6 %id)
BF590439 Kidney .a 3562 to 3929 368 to 1       368/368
(100 %)
2 diff
(99.5 %id)
AI220506   .a 3566 to 3929 364 to 1       364/364
(100 %)
0 diff
(100 %id)
AI684667 pooled .a 3567 to 3929 364 to 1       364/364
(100 %)
1 diff
(99.8 %id)
AI478461 Kidney .a 3569 to 3929 361 to 1       361/361
(100 %)
0 diff
(100 %id)
R64162 placenta .a 3573 to 3934 371 to 1   fully sequenced,   371/371
(100 %)
19 diff
(94.9 %id)
AA327412 colon .a 3575 to 3738 1 to 164       164/164
(100 %)
0 diff
(100 %id)
AW952299   .a 3576 to 4016 1 to 441       441/441
(100 %)
0 diff
(100 %id)
AW614350 Kidney .a 3579 to 3946 368 to 1       368/368
(100 %)
0 diff
(100 %id)
AA523856 colon .a 3580 to 3929 349 to 1       349/349
(100 %)
5 diff
(98.6 %id)
AI935645 Kidney .a 3580 to 3957 379 to 1       379/379
(100 %)
1 diff
(99.8 %id)
BF591242 colon, colon tumor, RER+ .a 3584 to 3890 307 to 1       307/307
(100 %)
0 diff
(100 %id)
AI910425 pooled .a 3589 to 3929 341 to 1       341/341
(100 %)
13 diff
(96.2 %id)
AA514702 colon .a 3592 to 3706 115 to 1       115/115
(100 %)
2 diff
(98.3 %id)
AI702129 carcinoid, lung .a 3603 to 3929 328 to 1       328/335
(97 %)
2 diff
(99.5 %id)
AI014629   .a 3606 to 3929 324 to 1       324/324
(100 %)
0 diff
(100 %id)
AI817888 anaplastic oligodendroglioma, brain .a 3606 to 3929 324 to 1       324/471
(68 %)
0 diff
(100 %id)
AA922071 adenocarcinoma, colon .a 3611 to 3956 348 to 1       348/348
(100 %)
6 diff
(98.3 %id)
AI651320 Kidney .a 3613 to 3939 327 to 1       327/327
(100 %)
1 diff
(99.7 %id)
AI739202 colon, colon tumor, RER+ .a 3614 to 3929 317 to 1       317/317
(100 %)
4 diff
(98.8 %id)
AI695211 Kidney .a 3615 to 3956 343 to 1       343/343
(100 %)
1 diff
(99.8 %id)
BF940312 Kidney .a 3621 to 3929 309 to 1       309/309
(100 %)
0 diff
(100 %id)
AA445996   .a 3744 to 3908 164 to 1   fully sequenced,   164/164
(100 %)
0 diff
(100 %id)
BU733578 eye, optic nerve .a 3829 to 4187 377 to 19   tiling clone, fully sequenced, AAA   359/359
(100 %)
0 diff
(100 %id)
BC035808 Brain, adult medulla .b 1 to 3889 1 to 3889 S857P tiling clone, available from MGC,   3889/3889
(100 %)
1 diff
(100.0 %id)
NM_020902.1   .b 1 to 4102 1 to 4102 exact RefSeq, AAA   4102/4102
(100 %)
0 diff
(100 %id)
BX459117 placenta .b 556 to 1437 1 to 882       882/905
(97 %)
25 diff
(97.3 %id)
TI_57239703   .c 1 to 885 60 to 943   tiling clone,   884/946
(93 %)
25 diff
(97.4 %id)
BC036935 Brain, fetal, whole pooled .c 9 to 1675 1 to 1667 exact tiling clone, available from MGC,   1667/1667
(100 %)
0 diff
(100 %id)
BI916183 brain .c 9 to 885 1 to 876   available from MGC,   876/879
(99 %)
21 diff
(97.7 %id)
CV427792 prostate_tumor .c 303 to 613 310 to 1     Submitted on the opposite strand 310/312
(99 %)
1 diff
(99.7 %id)
AI391535 B-cell, chronic lymphotic leukemia .c 1329 to 1630 302 to 1       302/302
(100 %)
0 diff
(100 %id)
AI081650 breast .c 1332 to 1506 178 to 4       175/178
(98 %)
0 diff
(100 %id)
AI401107 B-cell, chronic lymphotic leukemia .c 1332 to 1658 327 to 1       327/327
(100 %)
0 diff
(100 %id)
AI702613 pooled .c 1332 to 1630 299 to 1       299/299
(100 %)
6 diff
(98.0 %id)
AI500651 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .c 1333 to 1651 319 to 1       319/319
(100 %)
0 diff
(100 %id)
AW452196   .c 1338 to 1682 345 to 1       345/355
(97 %)
0 diff
(100 %id)
AW274234 pooled .c 1338 to 1646 309 to 1       309/309
(100 %)
0 diff
(100 %id)
AW592589 pooled .c 1341 to 1630 290 to 1       290/290
(100 %)
2 diff
(99.4 %id)
AA758339   .c 1344 to 1631 283 to 1       283/283
(100 %)
11 diff
(96.2 %id)
AI560147 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .c 1344 to 1882 553 to 15   tiling clone, AAA   539/539
(100 %)
7 diff
(98.8 %id)
AI610284 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .c 1355 to 1683 330 to 2       329/330
(99 %)
0 diff
(100 %id)
AI636081 Kidney .c 1403 to 1630 228 to 1       228/228
(100 %)
0 diff
(100 %id)
AI024287   .c 1441 to 1630 190 to 1       190/190
(100 %)
0 diff
(100 %id)
AI972630 Prostate .c 1484 to 1630 147 to 1       147/147
(100 %)
0 diff
(100 %id)
AI972363 Prostate .c 1485 to 1658 174 to 1       174/174
(100 %)
0 diff
(100 %id)
BQ184165 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c 1520 to 1882 381 to 19   AAA   363/365
(99 %)
3 diff
(99.2 %id)
BU567106 mixed (pool of 40 RNAs) .c 1555 to 1882 1 to 328   AAA   328/328
(100 %)
3 diff
(99.1 %id)
R02036 liver and spleen .c 1627 to 1878 256 to 3       254/256
(99 %)
0 diff
(100 %id)
AI631042 carcinoid, lung .c 1670 to 1848 1 to 179     Submitted on the opposite strand 179/179
(100 %)
15 diff
(91.7 %id)
AI202427 Prostate .c 1676 to 1864 1 to 189     Submitted on the opposite strand 189/189
(100 %)
0 diff
(100 %id)
AW014632   .c 1677 to 1882 1 to 206   AAA Submitted on the opposite strand 206/206
(100 %)
0 diff
(100 %id)
AW611992 Kidney .c 1691 to 1868 1 to 178     Submitted on the opposite strand 178/178
(100 %)
0 diff
(100 %id)
AI688508 colon .c 1710 to 1878 1 to 169     Submitted on the opposite strand 169/169
(100 %)
1 diff
(99.5 %id)
AA535487 invasive prostate tumor, Prostate .c 1743 to 1890 162 to 15   tiling clone,   148/167
(88 %)
0 diff
(100 %id)
BG108946 retina, Retinal Pigment Epithelium sheets .c 1750 to 1880 1 to 131       131/131
(100 %)
4 diff
(97.0 %id)
BX409948 placenta .d 1 to 926 1 to 918   tiling clone,   918/920
(99 %)
24 diff
(97.4 %id)
TI_57220134   .e 1 to 853 22 to 870 P2S P4Q A5P Q6V S7E ...     849/875
(97 %)
40 diff
(95.5 %id)
BI756884 brain .e 8 to 853 1 to 843   tiling clone,   843/848
(99 %)
44 diff
(94.9 %id)
H43278 breast .f 1 to 412 1 to 423   tiling clone,   421/424
(99 %)
28 diff
(93.4 %id)
R72550 breast .f 13 to 335 1 to 324       324/324
(100 %)
5 diff
(98.5 %id)
H25607 breast .f 13 to 453 1 to 447   tiling clone, fully sequenced,   447/447
(100 %)
22 diff
(95.1 %id)
BM926670 pooled lung and spleen .f 184 to 805 2 to 622       621/622
(99 %)
6 diff
(99.1 %id)
BF061303 fibrotheoma, ovary .f 216 to 721 506 to 1       506/506
(100 %)
2 diff
(99.7 %id)
BM702449 eye, optic nerve .f 228 to 805 1 to 578       578/578
(100 %)
0 diff
(100 %id)
BM709036 eye, optic nerve .f 228 to 492 1 to 265   fully sequenced,   265/265
(100 %)
0 diff
(100 %id)
TI_153963451   .f 228 to 813 79 to 664   tiling clone, fully sequenced,   586/586
(100 %)
1 diff
(99.9 %id)
TI_151700253   .f 387 to 813 479 to 52   fully sequenced,   428/479
(89 %)
0 diff
(100 %id)
H25561 breast .f 423 to 721 303 to 1   fully sequenced,   303/303
(100 %)
10 diff
(96.7 %id)
BU732496 eye, optic nerve .f 431 to 1012 600 to 19   tiling clone, fully sequenced, AAA   582/582
(100 %)
0 diff
(100 %id)
AI262889 Kidney .g 1 to 322 322 to 1 exact tiling clone,   322/322
(100 %)
1 diff
(99.7 %id)
AL044383 testis Gene KIAA1543, variant not shown         This clone was ignored    
AL044384 testis Gene KIAA1543, variant not shown         This clone was ignored    
T95841 liver and spleen Gene KIAA1543, variant not shown       fully sequenced, This clone was ignored    
T95935 liver and spleen Gene KIAA1543, variant not shown       fully sequenced, This clone was ignored    
AA001724 liver and spleen Gene KIAA1543, variant not shown       fully sequenced, This clone was ignored    
AA002004 liver and spleen Gene KIAA1543, variant not shown       fully sequenced, This clone was ignored    
AA677536 liver and spleen Gene KIAA1543, variant not shown         This clone was ignored    
AI004329 breast Gene KIAA1543, variant not shown         Suspected internal deletion, this clone was ignored    
BC064490 Eye, retinoblastoma Gene KIAA1543, variant not shown       available from MGC, AAA Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI