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Gene SMEK2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
427 representative clones for gene SMEK2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA879263 Prostate .a 1 to 577 2 to 579   tiling clone, capped   578/578
(100 %)
1 diff
(99.9 %id)
DR002925 fetal brain .a 469 to 1112 7 to 651   tiling clone,   645/651
(99 %)
6 diff
(99.1 %id)
BX481366   .a 470 to 992 1 to 524       524/524
(100 %)
3 diff
(99.5 %id)
DB054173 testis .a 473 to 1044 2 to 577   capped   576/576
(100 %)
5 diff
(99.2 %id)
DA370375 thalamus .a 479 to 1045 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA480553   .a 487 to 1029 2 to 545   capped   544/547
(99 %)
3 diff
(99.5 %id)
DA287651 corpus callosum .a 491 to 1039 2 to 551   capped   550/550
(100 %)
2 diff
(99.7 %id)
DB097617 testis .a 500 to 1087 2 to 590   capped   589/589
(100 %)
1 diff
(99.9 %id)
NM_001122964.1   .a 512 to 4968 1 to 4457 exact RefSeq, AAA   4457/4457
(100 %)
0 diff
(100 %id)
DB071747 testis .a 544 to 1095 2 to 554   capped   553/553
(100 %)
2 diff
(99.7 %id)
DB087960 testis .a 546 to 1092 2 to 550   capped   549/549
(100 %)
2 diff
(99.7 %id)
BX495308 Liver .a 549 to 1174 1 to 627       627/627
(100 %)
5 diff
(99.3 %id)
BX643193   .a 550 to 1143 1 to 595       595/595
(100 %)
3 diff
(99.5 %id)
AK056036   .a 551 to 2571 1 to 2023   available from FLJ,   2023/2023
(100 %)
4 diff
(99.9 %id)
DA218771 brain .a 552 to 1100 2 to 552   capped   551/551
(100 %)
2 diff
(99.7 %id)
BX500373 Liver .a 552 to 1141 1 to 591       591/591
(100 %)
4 diff
(99.4 %id)
DA486581 brain .a 552 to 1120 2 to 574   capped   573/573
(100 %)
5 diff
(99.2 %id)
DA684055   .a 552 to 1003 2 to 454   capped   453/453
(100 %)
4 diff
(99.2 %id)
DB254086 uterus .a 552 to 1105 2 to 557   capped   556/557
(99 %)
4 diff
(99.3 %id)
DA492517 brain .a 553 to 1122 2 to 573   capped   572/572
(100 %)
3 diff
(99.5 %id)
DA855237 placenta .a 553 to 1154 2 to 604   capped   603/603
(100 %)
2 diff
(99.7 %id)
DA461944 tongue, tumor tissue .a 554 to 1122 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DA741747   .a 554 to 1074 2 to 523   capped   522/522
(100 %)
3 diff
(99.5 %id)
DA806582 brain .a 554 to 1136 2 to 587   capped   586/586
(100 %)
3 diff
(99.5 %id)
DB095037 testis .a 554 to 1146 2 to 596   capped   595/595
(100 %)
1 diff
(99.9 %id)
DA500005 brain .a 555 to 1124 2 to 575   capped   574/574
(100 %)
4 diff
(99.4 %id)
DA740987   .a 555 to 1066 2 to 514   capped   513/513
(100 %)
3 diff
(99.5 %id)
DA816276   .a 555 to 1115 2 to 563   capped   562/562
(100 %)
2 diff
(99.7 %id)
AK296481 thalamus .a 556 to 3544 1 to 2990 G89D L134P L142P F210S T384I ...     2990/2990
(100 %)
11 diff
(99.7 %id)
DA167467 amygdala .a 556 to 1117 2 to 565   capped   564/564
(100 %)
3 diff
(99.5 %id)
DA219734 brain .a 556 to 1111 2 to 558   capped   557/557
(100 %)
2 diff
(99.7 %id)
DB063880 testis .a 556 to 1099 2 to 546   capped   545/545
(100 %)
2 diff
(99.7 %id)
DB235858 trachea .a 556 to 1115 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DA235987 brain .a 557 to 1124 2 to 572   capped   571/571
(100 %)
5 diff
(99.2 %id)
DA238541 brain .a 557 to 1149 2 to 595   capped   594/594
(100 %)
2 diff
(99.7 %id)
DA411282 thalamus .a 557 to 1223 2 to 670   capped   669/669
(100 %)
5 diff
(99.3 %id)
DB024457 testis .a 557 to 1108 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
DB236580 trachea .a 557 to 1138 2 to 584   capped   583/583
(100 %)
1 diff
(99.9 %id)
DA392286 thalamus .a 558 to 1153 2 to 598   capped   597/597
(100 %)
2 diff
(99.7 %id)
DA661656   .a 558 to 1122 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
DB069390 testis .a 558 to 1074 2 to 519   capped   518/518
(100 %)
1 diff
(99.9 %id)
DB094998 testis .a 558 to 1148 2 to 593   capped   592/592
(100 %)
2 diff
(99.7 %id)
DB216827 trachea .a 558 to 1111 2 to 560   capped   559/559
(100 %)
5 diff
(99.2 %id)
DA190990 amygdala .a 559 to 1141 2 to 585   capped   584/584
(100 %)
2 diff
(99.7 %id)
DA339994 hippocampus .a 559 to 1122 2 to 566   capped   565/565
(100 %)
2 diff
(99.7 %id)
DA855385 placenta .a 559 to 1101 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
CD656891 Embryonic Stem cells .a 560 to 1398 1 to 839       839/842
(99 %)
14 diff
(98.4 %id)
DA862870 placenta .a 560 to 1135 2 to 580   capped   579/579
(100 %)
5 diff
(99.2 %id)
DB069263 testis .a 560 to 1092 9 to 543   capped   535/535
(100 %)
2 diff
(99.7 %id)
BX503410 Liver .a 562 to 1094 1 to 534       534/534
(100 %)
4 diff
(99.3 %id)
DA337641 hippocampus .a 563 to 1157 2 to 597   capped   596/596
(100 %)
3 diff
(99.5 %id)
DA502628 brain .a 564 to 1097 2 to 536   capped   535/535
(100 %)
1 diff
(99.9 %id)
DA759356   .a 564 to 1074 2 to 514   capped   513/513
(100 %)
2 diff
(99.7 %id)
DA787409 brain .a 564 to 1140 2 to 579   capped   578/578
(100 %)
2 diff
(99.7 %id)
DB065715 testis .a 564 to 1129 2 to 569   capped   568/568
(100 %)
3 diff
(99.5 %id)
BX646291   .a 566 to 1141 1 to 577       577/577
(100 %)
3 diff
(99.5 %id)
DA215831 brain .a 567 to 1132 2 to 567   capped   566/566
(100 %)
3 diff
(99.5 %id)
DA223903 brain .a 567 to 1221 2 to 657   capped   656/656
(100 %)
2 diff
(99.7 %id)
DA864484 placenta .a 567 to 1152 2 to 588   capped   587/587
(100 %)
1 diff
(99.9 %id)
DB291715 uterus .a 567 to 1152 2 to 589   tiling clone, capped   588/588
(100 %)
1 diff
(99.9 %id)
DA126977 cerebellum .a 568 to 1151 2 to 586   capped   585/585
(100 %)
1 diff
(99.9 %id)
DA230091 brain .a 568 to 1132 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
DA493520 brain .a 568 to 1136 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DB145767 thymus .a 568 to 1105 2 to 541   capped   540/540
(100 %)
4 diff
(99.3 %id)
DB229413 trachea .a 568 to 1115 2 to 550   capped   549/549
(100 %)
2 diff
(99.7 %id)
DA112139 cerebellum .a 569 to 1144 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
DA684912   .a 569 to 1109 2 to 543   capped   542/542
(100 %)
2 diff
(99.7 %id)
DA685520   .a 569 to 1144 2 to 578   capped   577/577
(100 %)
2 diff
(99.7 %id)
DB131459 thymus .a 569 to 1116 2 to 550   capped   549/549
(100 %)
3 diff
(99.5 %id)
DB143272 thymus .a 569 to 1068 2 to 502   capped   501/501
(100 %)
2 diff
(99.7 %id)
DB149623 thymus .a 569 to 1146 2 to 582   capped   581/582
(99 %)
5 diff
(99.2 %id)
DA101327 cerebellum .a 571 to 1133 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DA618066   .a 571 to 1146 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
BX479482   .a 572 to 1119 1 to 549       549/549
(100 %)
2 diff
(99.7 %id)
BQ436567 embryonal carcinoma, cell line, testis .a 572 to 1427 1 to 857       857/857
(100 %)
5 diff
(99.5 %id)
CB269666 adipose .a 573 to 1108 1 to 538       538/538
(100 %)
2 diff
(99.7 %id)
DA243851 brain .a 574 to 1161 2 to 590   capped   589/589
(100 %)
2 diff
(99.7 %id)
DA320748 hippocampus .a 574 to 1126 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
DA758179   .a 574 to 1123 2 to 552   capped   551/551
(100 %)
3 diff
(99.5 %id)
DB214764 trachea .a 574 to 1127 2 to 559   capped   558/558
(100 %)
5 diff
(99.2 %id)
DA381075 thalamus .a 576 to 1113 2 to 540   capped   539/540
(99 %)
2 diff
(99.7 %id)
AI815659 brain, frontal lobe .a 577 to 1076 1 to 501       501/501
(100 %)
1 diff
(99.9 %id)
CB994451 placenta, pre-eclamptic placenta .a 578 to 1268 28 to 731       704/841
(83 %)
23 diff
(97.3 %id)
CB992646 placenta, pre-eclamptic placenta .a 578 to 1337 28 to 803       776/861
(90 %)
34 diff
(96.1 %id)
CB961751 placenta, pre-eclamptic placenta .a 578 to 1348 28 to 803       776/806
(96 %)
11 diff
(98.7 %id)
DR000996 fetal brain .a 578 to 1343 8 to 772       765/772
(99 %)
8 diff
(99.0 %id)
DA461851 tongue, tumor tissue .a 579 to 1113 2 to 538   capped   537/537
(100 %)
4 diff
(99.3 %id)
BM461391 eye, retinoblastoma .a 579 to 1467 15 to 917       903/1063
(84 %)
28 diff
(97.4 %id)
DA755807   .a 579 to 1147 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DA858140 placenta .a 579 to 1141 2 to 568   capped   567/567
(100 %)
4 diff
(99.3 %id)
DB233402 trachea .a 579 to 1185 2 to 609   capped   608/610
(99 %)
3 diff
(99.6 %id)
CR988014 T-Lymphocytes .a 582 to 1355 1 to 776       776/776
(100 %)
2 diff
(99.8 %id)
DB291561 uterus .a 583 to 1171 2 to 591   capped   590/590
(100 %)
1 diff
(99.9 %id)
AB037808 brain .a 585 to 4968 1 to 4385 I503V tiling clone, available from KIAA,   4385/4385
(100 %)
3 diff
(100.0 %id)
CR975948 T-Lymphocytes .a 585 to 1501 1 to 917       917/917
(100 %)
4 diff
(99.6 %id)
CR986754 T-Lymphocytes .a 585 to 1491 1 to 915       915/916
(99 %)
12 diff
(98.7 %id)
CR975256 T-Lymphocytes .a 585 to 1332 1 to 749       749/749
(100 %)
2 diff
(99.8 %id)
CT004986 T-Lymphocytes .a 585 to 1498 1 to 913       913/913
(100 %)
3 diff
(99.7 %id)
DA760112   .a 594 to 1144 2 to 553   capped   552/552
(100 %)
2 diff
(99.7 %id)
CN300572 embryonic stem cells, DMSO-treated H9 cellline .a 620 to 1140 1 to 522       522/522
(100 %)
2 diff
(99.7 %id)
AY825269   .a 887 to 3436 1 to 2550 I503V tiling clone,   2550/2550
(100 %)
1 diff
(100.0 %id)
DA806381 brain .a 1088 to 1642 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
TI_154152718   .a 1109 to 1792 79 to 760       682/684
(99 %)
9 diff
(98.7 %id)
BM835261 stomach .a 1254 to 1769 1 to 516       516/516
(100 %)
0 diff
(100 %id)
BQ226085 embryonal carcinoma, cell line, testis .a 1305 to 2007 1 to 703       703/900
(78 %)
11 diff
(98.8 %id)
DA226378 brain .a 1401 to 1929 2 to 531   capped   530/531
(99 %)
3 diff
(99.5 %id)
DB223822 trachea .a 1401 to 1966 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA741861   .a 1403 to 1959 2 to 558   capped   557/558
(99 %)
1 diff
(99.9 %id)
TI_154160389   .a 1461 to 2003 84 to 627       544/548
(99 %)
8 diff
(98.6 %id)
DB121862 thymus .a 1468 to 2025 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
BQ427965 melanotic melanoma, skin .a 1510 to 2397 1 to 889       889/890
(99 %)
12 diff
(98.7 %id)
DA119236 cerebellum .a 1609 to 2135 2 to 528   capped   527/527
(100 %)
0 diff
(100 %id)
BF792479 adrenal cortex carcinoma, cell line, adrenal gland .a 1696 to 2356 1 to 660       660/1130
(58 %)
4 diff
(99.7 %id)
DB092705 testis .a 1788 to 2341 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
CF994310 Human Placenta, placenta .a 1849 to 2613 20 to 788       769/836
(91 %)
15 diff
(98.3 %id)
DA885430   .a 1941 to 2488 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
TI_154155114   .a 1946 to 2492 86 to 631       546/547
(99 %)
7 diff
(98.8 %id)
DA881580   .a 2006 to 2557 2 to 554   capped   553/553
(100 %)
2 diff
(99.7 %id)
DB322825   .a 2032 to 2571 541 to 1       541/541
(100 %)
3 diff
(99.5 %id)
BQ436935 embryonal carcinoma, cell line, testis .a 2342 to 3198 1 to 869       867/897
(96 %)
17 diff
(98.2 %id)
DA506313 brain .a 2345 to 2903 2 to 561   capped   560/560
(100 %)
2 diff
(99.7 %id)
BM478716 melanotic melanoma, skin .a 2382 to 3337 12 to 983   AAA   972/1078
(90 %)
37 diff
(96.6 %id)
DR761239 embryonic stem .a 2392 to 3238 1 to 846       846/846
(100 %)
2 diff
(99.8 %id)
BM738597 stomach .a 2395 to 2998 1 to 604       604/604
(100 %)
1 diff
(99.9 %id)
AL136556 amygdala .a 2454 to 4968 1 to 2515   available from DKFZ, AAA   2515/2515
(100 %)
1 diff
(100.0 %id)
DA336077 hippocampus .a 2465 to 3050 2 to 587   capped   586/586
(100 %)
1 diff
(99.9 %id)
DA735669   .a 2472 to 3259 2 to 789   capped   788/788
(100 %)
5 diff
(99.4 %id)
DB023660 testis .a 2486 to 3018 2 to 534   capped   533/533
(100 %)
0 diff
(100 %id)
AI640628 Kidney .a 2528 to 3139 612 to 1       612/621
(98 %)
4 diff
(99.4 %id)
BG289239 bladder, transitional cell papilloma, cell line .a 2556 to 3347 1 to 793       793/955
(83 %)
22 diff
(97.7 %id)
DA310189 hippocampus .a 2557 to 3118 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
BQ217562 embryonal carcinoma, cell line, testis .a 2557 to 3398 1 to 851       851/866
(98 %)
19 diff
(97.9 %id)
DA810948 brain .a 2573 to 3132 2 to 562   capped   561/561
(100 %)
2 diff
(99.7 %id)
DB173900 kidney, tumor tissue .a 2580 to 3139 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA750552   .a 2584 to 3165 2 to 583   capped   582/582
(100 %)
1 diff
(99.9 %id)
AW270883 Kidney .a 2606 to 3138 533 to 1       533/533
(100 %)
0 diff
(100 %id)
DA747289   .a 2705 to 3283 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
EC459076 Prostate .a 2729 to 2829 1 to 102       102/102
(100 %)
6 diff
(94.2 %id)
DA752391   .a 2730 to 3293 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA549410   .a 2811 to 3386 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
CN300577 embryonic stem cells, cell lines H1, H7, andH9 .a 2853 to 3541 1 to 688       688/688
(100 %)
1 diff
(99.9 %id)
DA833676 placenta .a 2864 to 3590 2 to 730   capped   729/729
(100 %)
11 diff
(98.5 %id)
DA131037 alzheimer cortex .a 2883 to 3429 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA993758 synovial membrane tissue from rheumatioidarthritis .a 2892 to 3421 2 to 532   capped   531/531
(100 %)
2 diff
(99.7 %id)
DB163641 thymus .a 2896 to 3487 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
CN300573 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 2930 to 3574 1 to 645       645/645
(100 %)
0 diff
(100 %id)
DB031187 testis .a 2935 to 3542 2 to 608   capped   607/607
(100 %)
1 diff
(99.9 %id)
BM804246 eye, retinoblastoma .a 2971 to 3850 1 to 889       889/1113
(79 %)
20 diff
(98.3 %id)
BE882739 leiomyosarcoma, uterus .a 3063 to 3844 1 to 778       778/1008
(77 %)
39 diff
(96.2 %id)
AU117284 whole embryo, mainly head .a 3237 to 3988 2 to 754   capped   753/753
(100 %)
4 diff
(99.5 %id)
AL122106 testis .a 3249 to 4968 1 to 1720   available from DKFZ, AAA   1720/1720
(100 %)
1 diff
(100.0 %id)
DA420311 cervix .a 3261 to 3825 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
BE536370 cervix .a 3305 to 4032 1 to 725       725/726
(99 %)
18 diff
(97.6 %id)
CX870622 embryonic stem .a 3313 to 4056 1 to 744       744/744
(100 %)
1 diff
(99.9 %id)
DA882997   .a 3335 to 3883 2 to 550   capped   549/549
(100 %)
5 diff
(99.1 %id)
BX371745 Placenta Cot 25-normalized .a 3347 to 4267 919 to 1       919/919
(100 %)
6 diff
(99.4 %id)
FN053148 breast carcinoma .a 3376 to 3478 103 to 1     Submitted on the opposite strand 103/104
(99 %)
0 diff
(100 %id)
BU928683 brain, glioblastoma .a 3437 to 4207 1 to 777       777/781
(99 %)
13 diff
(98.4 %id)
DB199515 trachea .a 3445 to 3984 2 to 542   capped   541/541
(100 %)
4 diff
(99.3 %id)
BX478816   .a 3509 to 4047 1 to 539       539/539
(100 %)
2 diff
(99.7 %id)
DB206149 trachea .a 3541 to 4133 2 to 595   capped   594/594
(100 %)
3 diff
(99.5 %id)
BG260828 bladder, transitional cell papilloma, cell line .a 3658 to 4407 1 to 749       749/778
(96 %)
7 diff
(99.2 %id)
BU181050 large cell carcinoma, lung .a 3783 to 4591 4 to 821       818/825
(99 %)
6 diff
(99.3 %id)
CD643402 Embryonic Stem cells .a 3787 to 4585 1 to 795       795/845
(94 %)
11 diff
(98.7 %id)
CB129000 Liver .a 3963 to 4596 1 to 634       634/634
(100 %)
3 diff
(99.6 %id)
AA345680 gall bladder .a 4137 to 4448 1 to 312       312/312
(100 %)
0 diff
(100 %id)
BQ881107 dorsal root ganglia .a 4350 to 5221 1 to 885       885/889
(99 %)
15 diff
(98.4 %id)
AI879959 brain, frontal lobe .a 4402 to 4970 580 to 12   AAA   569/569
(100 %)
2 diff
(99.7 %id)
AU152739   .a 4432 to 4968 536 to 1       536/536
(100 %)
10 diff
(98.2 %id)
AU158235 placenta .a 4444 to 4970 525 to 1       525/535
(98 %)
10 diff
(98.2 %id)
AL043254 testis .a 4521 to 5229 1 to 716       716/728
(98 %)
15 diff
(98.0 %id)
BG617242 Liver .a 4601 to 5252 1 to 658       658/658
(100 %)
10 diff
(98.5 %id)
DB355045 whole embryo, mainly head .a 4659 to 4968 311 to 1       311/311
(100 %)
7 diff
(97.8 %id)
CD518374 White Matter .a 4677 to 5482 22 to 835   tiling clone,   814/835
(97 %)
6 diff
(99.3 %id)
BG112706 Bone, osteosarcoma, cell line .a 4807 to 5542 1 to 733       733/970
(75 %)
18 diff
(98.2 %id)
CB146980 Liver .a 4989 to 5590 1 to 602       602/602
(100 %)
2 diff
(99.7 %id)
BM794157 Ascites, stomach .a 5027 to 5624 1 to 598   tiling clone,   598/598
(100 %)
0 diff
(100 %id)
BE176312 head_neck .a 5187 to 5800 632 to 19     Submitted on the opposite strand 614/636
(96 %)
0 diff
(100 %id)
N29072 melanocyte .a 5399 to 5696 1 to 299   fully sequenced,   299/299
(100 %)
1 diff
(99.7 %id)
CA425989 Bone, Subchondral Bone .a 5436 to 6048 631 to 19   AAA   613/613
(100 %)
0 diff
(100 %id)
BU630214 cell lines, Chondrosarcoma .a 5436 to 6048 631 to 19   AAA   613/613
(100 %)
0 diff
(100 %id)
BQ004576 Chondrosarcoma, Left Pelvis .a 5437 to 6052 630 to 15   AAA   616/616
(100 %)
0 diff
(100 %id)
R62879 placenta .a 5471 to 5840 1 to 377   fully sequenced,   377/377
(100 %)
7 diff
(98.2 %id)
BP424158 small intestine .a 5489 to 6037 1 to 549     Submitted on the opposite strand 549/549
(100 %)
0 diff
(100 %id)
BM127824 Islets of Langerhans, Pancreas .a 5522 to 6049 528 to 1       528/528
(100 %)
0 diff
(100 %id)
CK819160 Islets of Langerhans, Pancreas .a 5548 to 6049 502 to 1       502/502
(100 %)
4 diff
(99.3 %id)
AW008342 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 5624 to 6054 431 to 1   tiling clone,   431/431
(100 %)
0 diff
(100 %id)
BE048382 Kidney .a 5632 to 6054 423 to 1       423/423
(100 %)
0 diff
(100 %id)
N20171 melanocyte .a 5666 to 6054 390 to 1   fully sequenced,   390/390
(100 %)
1 diff
(99.8 %id)
BM930750 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 5677 to 6048 1 to 372   fully sequenced, AAA   372/372
(100 %)
0 diff
(100 %id)
CA436170 lung, Metastatic Chondrosarcoma .a 5680 to 6048 387 to 19   AAA   369/369
(100 %)
0 diff
(100 %id)
R62828 placenta .a 5810 to 6048 249 to 1   fully sequenced,   249/249
(100 %)
0 diff
(100 %id)
AI337236 colon, colon tumor, RER+ .a 5821 to 6054 246 to 13   AAA   234/234
(100 %)
0 diff
(100 %id)
BM685272 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 5848 to 6048 219 to 19   fully sequenced, AAA   201/201
(100 %)
0 diff
(100 %id)
D25788   .a 5912 to 6051 1 to 140     Submitted on the opposite strand 140/140
(100 %)
0 diff
(100 %id)
BC006215 Placenta, choriocarcinoma .b -8 to 3266 1 to 3264 exact tiling clone, available from MGC, AAA   3264/3264
(100 %)
7 diff
(99.8 %id)
AY825268   .b 314 to 2767 1 to 2454 exact tiling clone,   2454/2454
(100 %)
0 diff
(100 %id)
DA715015   .b 1299 to 1835 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
BG104694 adrenal cortex carcinoma, cell line, adrenal gland .b 1359 to 2106 1 to 743       743/897
(82 %)
27 diff
(97.0 %id)
DA238031 brain .b 1406 to 1985 2 to 582   capped   581/581
(100 %)
2 diff
(99.7 %id)
DA499269 brain .b 1471 to 2044 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
BM721880 eye, fetal eye .b 1471 to 1957 1 to 487       487/487
(100 %)
1 diff
(99.8 %id)
DB154232 thymus .b 1490 to 2082 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
BQ215548 embryonal carcinoma, cell line, testis .b 1572 to 2401 1 to 833       833/837
(99 %)
4 diff
(99.6 %id)
DB285562 uterus .b 1636 to 2175 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DA487186 brain .b 1683 to 2264 2 to 583   capped   582/582
(100 %)
3 diff
(99.5 %id)
BM006939 ductal carcinoma, cell line, Pancreas .b 1683 to 2394 752 to 23       730/1073
(68 %)
31 diff
(97.2 %id)
TI_59395830   .b 1683 to 2394 752 to 23       730/1073
(68 %)
31 diff
(97.2 %id)
DA626087 Kidney .b 1735 to 2270 2 to 537   capped   536/536
(100 %)
2 diff
(99.7 %id)
BX359315 Placenta Cot 25-normalized .b 3209 to 4246 1031 to 1   tiling clone,   1031/1041
(99 %)
37 diff
(96.5 %id)
BG535143 lung .b 3218 to 4022 1 to 807   tiling clone,   807/812
(99 %)
40 diff
(95.1 %id)
BU569222 testis .b 3283 to 4091 1 to 810   tiling clone,   810/810
(100 %)
11 diff
(98.7 %id)
BU852825 testis .b 3283 to 3969 1 to 693   AAA   693/709
(97 %)
12 diff
(98.4 %id)
BG256753 embryonal carcinoma, cell line, testis .b 3365 to 3990 1 to 623       623/633
(98 %)
5 diff
(99.3 %id)
TI_154137178   .b 3397 to 4301 971 to 83   AAA   889/938
(94 %)
22 diff
(97.7 %id)
N71195 cochlea, ear .b 3448 to 3812 25 to 390       366/390
(93 %)
6 diff
(98.5 %id)
BM688108 eye, human retina .b 3454 to 3988 9 to 543       535/543
(98 %)
6 diff
(98.9 %id)
BX373617.
matches multiple genes
Placenta Cot 25-normalized .b 3467 to 4292 829 to 4     also hits gene TDG 826/920
(89 %)
0 diff
(100 %id)
CB959045 Pooled-Glandular .b 3477 to 4205 1 to 737       737/778
(94 %)
11 diff
(98.6 %id)
BU153344 embryonal carcinoma, cell line, testis .b 3527 to 4426 1 to 906       906/906
(100 %)
19 diff
(98.0 %id)
BX351901 Placenta Cot 25-normalized .b 3532 to 4281 758 to 8       751/897
(83 %)
0 diff
(100 %id)
TI_149296230   .b 3537 to 4303 867 to 108       760/1028
(73 %)
0 diff
(100 %id)
BG497980 adenocarcinoma, Prostate .b 3545 to 4211 1 to 664       664/877
(75 %)
22 diff
(97.5 %id)
BG498176 adenocarcinoma, Prostate .b 3545 to 4301 1 to 778   AAA   778/778
(100 %)
31 diff
(96.1 %id)
BG498856 adenocarcinoma, Prostate .b 3545 to 4289 1 to 742       742/742
(100 %)
17 diff
(97.8 %id)
BG528580 adenocarcinoma, Prostate .b 3545 to 4191 1 to 647       647/802
(80 %)
15 diff
(98.2 %id)
BX107725 uterus .b 3549 to 4219 1 to 671       671/676
(99 %)
1 diff
(99.9 %id)
AA150067 uterus .b 3549 to 3986 1 to 438   fully sequenced,   438/438
(100 %)
0 diff
(100 %id)
AA150075 uterus .b 3549 to 3945 1 to 400       400/400
(100 %)
4 diff
(99.0 %id)
BF752389 breast_normal .b 3553 to 4043 497 to 3     Submitted on the opposite strand 495/497
(99 %)
0 diff
(100 %id)
BF752450 breast_normal .b 3555 to 4043 488 to 3     Submitted on the opposite strand 486/490
(99 %)
0 diff
(100 %id)
AA291349 ovarian tumor, ovary .b 3571 to 3994 1 to 425   fully sequenced,   425/425
(100 %)
2 diff
(99.6 %id)
BG031136 breast, mammary adenocarcinoma, cell line .b 3575 to 4300 28 to 757       730/904
(80 %)
6 diff
(99.4 %id)
BE172248 head_neck .b 3579 to 4147 1 to 568       568/568
(100 %)
9 diff
(98.5 %id)
DA368403 subthalamic nucleus .b 3603 to 4155 2 to 554   capped   553/553
(100 %)
4 diff
(99.3 %id)
EB385475 eye, optic nerve .b 3603 to 4312 1 to 710   tiling clone,   710/710
(100 %)
0 diff
(100 %id)
DA785387 brain .b 3608 to 4172 2 to 568   capped   567/567
(100 %)
6 diff
(99.0 %id)
BM451745 eye, retinoblastoma .b 3625 to 4299 30 to 704   AAA   675/704
(95 %)
5 diff
(99.3 %id)
BF085694 placenta_normal .b 3626 to 3999 16 to 389       374/389
(96 %)
6 diff
(98.5 %id)
BM678394 eye, fetal eye .b 3646 to 4301 672 to 17   AAA   656/656
(100 %)
1 diff
(99.9 %id)
BF088779 head_neck .b 3652 to 4160 514 to 6       509/516
(98 %)
0 diff
(100 %id)
BQ428662 testis .b 3653 to 4286 1 to 640       640/808
(79 %)
11 diff
(98.7 %id)
BM993435 lung, Metastatic Chondrosarcoma .b 3661 to 4299 657 to 19   AAA   639/639
(100 %)
0 diff
(100 %id)
BU684230 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 3670 to 4301 650 to 19   AAA   632/632
(100 %)
2 diff
(99.7 %id)
BM677024 eye, fetal eye .b 3671 to 4299 647 to 19   AAA   629/629
(100 %)
0 diff
(100 %id)
R21188 placenta .b 3684 to 3969 1 to 290       290/295
(98 %)
6 diff
(98.0 %id)
DA947948 Spleen .b 3696 to 4252 2 to 560   capped   559/559
(100 %)
3 diff
(99.5 %id)
BM129661 Islets of Langerhans, Pancreas .b 3704 to 4242 1 to 539       539/539
(100 %)
1 diff
(99.9 %id)
BM129757 Islets of Langerhans, Pancreas .b 3704 to 4242 1 to 539       539/539
(100 %)
0 diff
(100 %id)
AA244045   .b 3712 to 4081 1 to 372       372/372
(100 %)
7 diff
(98.2 %id)
BE929652 placenta_normal .b 3731 to 4155 436 to 11       426/436
(97 %)
0 diff
(100 %id)
BE250422 muscle, rhabdomyosarcoma .b 3741 to 4246 529 to 16       514/529
(97 %)
0 diff
(100 %id)
AU311556 neuroblastoma .b 3741 to 4280 540 to 1       540/540
(100 %)
1 diff
(99.9 %id)
AI707883 aorta .b 3766 to 4301 540 to 5       536/540
(99 %)
0 diff
(100 %id)
AI708464 aorta .b 3768 to 4299 532 to 1       532/532
(100 %)
4 diff
(99.3 %id)
BG025929 Bone, osteosarcoma, cell line .b 3778 to 4299 1 to 524       524/1071
(48 %)
5 diff
(99.6 %id)
BF089927 marrow .b 3803 to 4284 16 to 497       482/497
(96 %)
6 diff
(98.8 %id)
AA604151 adrenal adenoma, adrenal gland .b 3808 to 4292 485 to 1       485/485
(100 %)
1 diff
(99.8 %id)
AW149116 Kidney, renal cell tumor .b 3827 to 4303 479 to 3       477/479
(99 %)
0 diff
(100 %id)
AI811341 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 3828 to 4294 467 to 1       467/467
(100 %)
0 diff
(100 %id)
AW589379 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 3853 to 4299 458 to 12   AAA   447/447
(100 %)
0 diff
(100 %id)
BP397155 pancreatic islet .b 3854 to 4301 1 to 448     Submitted on the opposite strand 448/448
(100 %)
2 diff
(99.6 %id)
BE767582 placenta_normal .b 3856 to 4241 400 to 15       386/400
(96 %)
0 diff
(100 %id)
AW517089 cervix .b 3876 to 4228 1 to 353     Submitted on the opposite strand 353/353
(100 %)
4 diff
(98.9 %id)
AI049646   .b 3880 to 4300 422 to 2       421/422
(99 %)
0 diff
(100 %id)
AI284502 colon, moderately-differentiated adenocarcinoma .b 3882 to 4299 448 to 30   AAA   419/419
(100 %)
1 diff
(99.8 %id)
AI800714 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 3882 to 4303 427 to 6       422/427
(98 %)
0 diff
(100 %id)
AI917259 Kidney, renal cell tumor .b 3882 to 4301 420 to 1       420/420
(100 %)
2 diff
(99.6 %id)
AW572083 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .b 3882 to 4302 421 to 1       421/421
(100 %)
1 diff
(99.8 %id)
BU754338 placenta .b 3883 to 4301 437 to 19   AAA   419/421
(99 %)
2 diff
(99.6 %id)
AI284511 colon, moderately-differentiated adenocarcinoma .b 3887 to 4299 443 to 30   AAA   414/414
(100 %)
1 diff
(99.8 %id)
DB513838 testis .b 3888 to 4299 1 to 412     Submitted on the opposite strand 412/412
(100 %)
0 diff
(100 %id)
AW195734 pooled .b 3888 to 4404 517 to 1       517/517
(100 %)
3 diff
(99.5 %id)
BF445509 Prostate .b 3896 to 4299 404 to 1       404/404
(100 %)
0 diff
(100 %id)
AI687922 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .b 3911 to 4301 391 to 1       391/391
(100 %)
0 diff
(100 %id)
BP396022 pancreatic islet .b 3918 to 4416 1 to 499   tiling clone, Submitted on the opposite strand 499/500
(99 %)
1 diff
(99.8 %id)
AA279045 germinal center B cell .b 3924 to 4303 385 to 6       380/385
(98 %)
0 diff
(100 %id)
AW296647   .b 3924 to 4301 394 to 16   AAA   379/379
(100 %)
4 diff
(99.0 %id)
DA669576 esophagus .b 3928 to 4325 2 to 400   capped   399/400
(99 %)
6 diff
(98.5 %id)
AI459609 colon .b 3937 to 4300 364 to 1       364/364
(100 %)
1 diff
(99.8 %id)
AA244255   .b 3939 to 4299 374 to 11   AAA   364/365
(99 %)
6 diff
(98.4 %id)
AW514139 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 3951 to 4300 351 to 2       350/351
(99 %)
0 diff
(100 %id)
AW192322 adenocarcinoma, Pancreas .b 3955 to 4302 348 to 1       348/348
(100 %)
0 diff
(100 %id)
AA149888 uterus .b 3956 to 4308 357 to 2   fully sequenced,   356/357
(99 %)
5 diff
(98.6 %id)
AA291399 ovarian tumor, ovary .b 3964 to 4299 367 to 31   fully sequenced, AAA   337/337
(100 %)
1 diff
(99.8 %id)
AI584087 adenocarcinoma, Pancreas .b 3964 to 4301 363 to 26   AAA   338/338
(100 %)
9 diff
(97.4 %id)
AI921384 adenocarcinoma, Pancreas .b 3966 to 4299 371 to 38   AAA   334/334
(100 %)
9 diff
(97.4 %id)
BQ028554 placenta, Placenta Choriocarcinoma .b 3978 to 4299 340 to 19   AAA   322/329
(97 %)
0 diff
(100 %id)
BE535491 cervix .b 3992 to 4303 1 to 312       312/312
(100 %)
0 diff
(100 %id)
R22806 placenta .b 4008 to 4303 305 to 4       302/307
(98 %)
0 diff
(100 %id)
BU726812 eye, human retina .b 4014 to 4301 304 to 17   AAA   288/288
(100 %)
3 diff
(99.0 %id)
T34045 blood, white blood cells .b 4016 to 4204 1 to 189       189/189
(100 %)
2 diff
(99.0 %id)
D19680   .b 4020 to 4303 1 to 284     Submitted on the opposite strand 284/285
(99 %)
1 diff
(99.7 %id)
AI400228 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 4025 to 4303 314 to 36       279/314
(88 %)
0 diff
(100 %id)
AI864757 lymph node, lymphoma, follicular mixed small and largecell .b 4046 to 4299 271 to 18   AAA   254/254
(100 %)
1 diff
(99.7 %id)
AA731413 germinal center B cell .b 4057 to 4299 263 to 21   AAA   243/243
(100 %)
1 diff
(99.6 %id)
BM151347 leukopheresis .b 4071 to 4299 245 to 17   AAA   229/229
(100 %)
13 diff
(94.4 %id)
N21995 cochlea, ear .b 4079 to 4302 224 to 1       224/224
(100 %)
0 diff
(100 %id)
T17248   .b 4133 to 4299 167 to 1       167/167
(100 %)
0 diff
(100 %id)
BE139538 serous papillary carcinoma, high grade, 2pooled tumors, uterus .b 4159 to 4301 154 to 12   AAA   143/143
(100 %)
0 diff
(100 %id)
NM_020463.2   .c 1 to 4202 1 to 4202 exact RefSeq, AAA   4202/4202
(100 %)
0 diff
(100 %id)
BC060855 Brain, hippocampus .c 48 to 4202 1 to 4156 exact tiling clone, available from MGC, AAA   4156/4156
(100 %)
2 diff
(100.0 %id)
AW235577 Kidney .c 1743 to 2366 624 to 1       624/635
(98 %)
3 diff
(99.6 %id)
DA810150 brain .c 1775 to 2330 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA478742   .c 1862 to 2230 2 to 370   capped   369/369
(100 %)
0 diff
(100 %id)
BG106894 lymph, lymphoma, cell line .d 1 to 680 1 to 675   tiling clone,   675/675
(100 %)
14 diff
(98.0 %id)
CN300574 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .d 11 to 661 3 to 654       652/654
(99 %)
8 diff
(98.8 %id)
CA392166 eye, RPE/choroid .d 483 to 943 1 to 461   tiling clone,   461/461
(100 %)
0 diff
(100 %id)
CK000807 mixed .d 499 to 1262 29 to 789   tiling clone,   761/834
(91 %)
17 diff
(98.0 %id)
BG505205 embryonal carcinoma, testis .d 1184 to 1787 1 to 605   tiling clone,   605/605
(100 %)
2 diff
(99.7 %id)
AK023148   .d 1341 to 3755 1 to 2415   tiling clone, available from FLJ,   2415/2415
(100 %)
4 diff
(99.9 %id)
BI909574 leukocyte .d 1341 to 2013 1 to 672       672/672
(100 %)
1 diff
(99.9 %id)
TI_57237847   .d 1341 to 2013 37 to 708       672/708
(94 %)
6 diff
(99.2 %id)
AU131164   .d 1342 to 2230 2 to 892   capped   891/894
(99 %)
8 diff
(99.2 %id)
AU152963   .d 3222 to 3755 537 to 1       537/537
(100 %)
13 diff
(97.6 %id)
DB235204 trachea .e 1 to 566 2 to 568   tiling clone, capped   567/567
(100 %)
1 diff
(99.9 %id)
DB239203 trachea .e 18 to 596 2 to 580   tiling clone, capped   579/579
(100 %)
2 diff
(99.7 %id)
DB220774 trachea .e 19 to 573 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DB222628 trachea .e 19 to 563 2 to 546   capped   545/545
(100 %)
1 diff
(99.9 %id)
AK026437 ileal mucosa .e 240 to 3763 1 to 3524 exact tiling clone, available from FLJ, AAA   3524/3524
(100 %)
4 diff
(99.9 %id)
DB082968 testis .e 1447 to 2000 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
CN402706 embryonic stem cells, DMSO-treated H9 cellline .e 1474 to 2018 1 to 545       545/545
(100 %)
0 diff
(100 %id)
BM697753 eye, fetal eyes .e 1521 to 1989 1 to 469       469/469
(100 %)
1 diff
(99.8 %id)
AA831931 germinal center B cell .e 1550 to 1940 394 to 4       391/394
(99 %)
0 diff
(100 %id)
BE889882 leiomyosarcoma, uterus .e 1658 to 2361 1 to 699       699/871
(80 %)
12 diff
(98.7 %id)
BI091804 cervix .e 1767 to 2502 1 to 735       735/737
(99 %)
4 diff
(99.5 %id)
BU736033 eye, fetal eyes .e 2242 to 2730 507 to 19   AAA   489/489
(100 %)
5 diff
(99.0 %id)
BF184410 bone marrow, from chronic myelogenous leukemia .f 1 to 725 1 to 720 F28L V29* tiling clone,   720/853
(84 %)
9 diff
(99.0 %id)
DA413634 thalamus .g 1 to 548 2 to 549   tiling clone, capped   548/548
(100 %)
0 diff
(100 %id)
DB132189 thymus .g 155 to 697 2 to 542   capped   541/541
(100 %)
7 diff
(98.8 %id)
DB116448 thymus .g 204 to 750 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DB014328 esophageal, tumor tissue .g 236 to 796 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA154111 amygdala .g 259 to 808 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DB205950 trachea .g 262 to 847 2 to 587   tiling clone, capped   586/586
(100 %)
0 diff
(100 %id)
DB519842 testis .h 1 to 435 1 to 435 exact tiling clone, Submitted on the opposite strand 435/435
(100 %)
0 diff
(100 %id)
BQ379298 uterus_tumor .i-u 1 to 420 422 to 9 K6Q L51* tiling clone,   414/432
(95 %)
0 diff
(100 %id)
BQ303681 breast .j 1 to 385 85 to 469   tiling clone,   385/469
(82 %)
6 diff
(98.8 %id)
DA690195   .j 182 to 715 2 to 536   tiling clone, capped   535/535
(100 %)
1 diff
(99.9 %id)
CX763085 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .j 204 to 846 642 to 1       642/819
(78 %)
26 diff
(96.9 %id)
BX475772   .j 210 to 854 1 to 646       646/646
(100 %)
6 diff
(99.1 %id)
AK056503   .j 215 to 3194 1 to 2978 exact tiling clone, available from FLJ,   2978/2978
(100 %)
8 diff
(99.8 %id)
BX477382   .j 215 to 718 1 to 508       508/508
(100 %)
5 diff
(99.1 %id)
DA049227   .j 216 to 805 2 to 594   capped   593/593
(100 %)
3 diff
(99.5 %id)
DA097286 cerebellum .j 216 to 784 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA143804 amygdala .j 216 to 779 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DA742980   .j 216 to 771 2 to 557   capped   556/556
(100 %)
2 diff
(99.7 %id)
DA768392 brain .j 218 to 744 2 to 531   capped   530/530
(100 %)
3 diff
(99.5 %id)
DA174049 amygdala .j 223 to 770 2 to 557   capped   556/556
(100 %)
12 diff
(97.9 %id)
DA299047 hippocampus .j 223 to 799 2 to 578   capped   577/577
(100 %)
2 diff
(99.7 %id)
DA177762 amygdala .j 224 to 702 2 to 481   capped   480/480
(100 %)
4 diff
(99.2 %id)
BM807903 ovary (pool of 3) .j 224 to 1028 8 to 816   tiling clone,   809/1100
(73 %)
14 diff
(98.8 %id)
DB106425 thymus .j 226 to 789 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DA210018 brain .j 235 to 787 2 to 566   capped   565/565
(100 %)
6 diff
(99.0 %id)
DA451367 tongue, tumor tissue .j 235 to 796 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA113082 cerebellum .j 246 to 793 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
BF346811 anaplastic oligodendroglioma with 1p/19qloss, brain .j 622 to 853 407 to 646       604/648
(93 %)
21 diff
(96.8 %id)
AA557133 breast .j 722 to 1009 21 to 308     Submitted on the opposite strand 288/308
(93 %)
6 diff
(98.1 %id)
AI433407 Kidney .j 722 to 1008 7 to 293     Submitted on the opposite strand 287/293
(97 %)
6 diff
(98.0 %id)
DA274994 corpus callosum .j 964 to 1482 2 to 521   capped   520/520
(100 %)
1 diff
(99.9 %id)
BG701403 brain, hippocampus .j 1232 to 1893 11 to 676       666/676
(98 %)
6 diff
(99.2 %id)
BE564058 bone marrow, from chronic myelogenous leukemia .j 1248 to 1310 1 to 64       64/64
(100 %)
1 diff
(98.5 %id)
DA017416 adrenal gland .j 1251 to 1726 2 to 478   capped   477/477
(100 %)
3 diff
(99.4 %id)
DB261776 uterus .j 1284 to 1853 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
BX489515   .j 1292 to 1878 1 to 588       588/588
(100 %)
5 diff
(99.2 %id)
DB167864 kidney, tumor tissue .j 1347 to 1925 2 to 581   capped   580/580
(100 %)
2 diff
(99.7 %id)
BX507071 Liver .j 1380 to 2051 1 to 672 exact     672/672
(100 %)
2 diff
(99.8 %id)
BX645269   .j 1383 to 1959 1 to 578 E34G A67G     578/578
(100 %)
4 diff
(99.4 %id)
BI459853 testis .j 1387 to 2042 1 to 657 exact     657/657
(100 %)
4 diff
(99.4 %id)
DA041781 bladder .j 1388 to 1957 2 to 578 exact capped   577/577
(100 %)
8 diff
(98.7 %id)
CR984760 T-Lymphocytes .j 1389 to 2162 1 to 775 exact     775/779
(99 %)
2 diff
(99.8 %id)
DA374049 thalamus .j 1390 to 1949 2 to 562 exact capped   561/561
(100 %)
1 diff
(99.9 %id)
DA231264 brain .j 1391 to 1930 2 to 542   capped   541/541
(100 %)
2 diff
(99.7 %id)
DA908377   .j 1399 to 1958 2 to 564 A67G S68K S69* capped   563/563
(100 %)
3 diff
(99.5 %id)
EL953212 eyeball .j 1401 to 1946 5 to 550 G25A K36N K55Q     546/550
(99 %)
7 diff
(98.8 %id)
DA351401 substantia nigra .j 1402 to 1988 2 to 589 exact capped   588/588
(100 %)
1 diff
(99.9 %id)
BQ424027 eye, retinoblastoma .j 1411 to 2297 1 to 896 exact     896/924
(96 %)
22 diff
(97.7 %id)
DA617078   .j 1411 to 1974 2 to 566 exact capped   565/565
(100 %)
2 diff
(99.7 %id)
BM906412 ovary (pool of 3) .j 1413 to 2234 23 to 854 exact     832/1088
(76 %)
23 diff
(97.9 %id)
DA140351 alzheimer cortex .j 1414 to 1987 2 to 576 exact capped   575/575
(100 %)
2 diff
(99.7 %id)
BM472460 melanotic melanoma, skin .j 1414 to 2111 1 to 708 exact     708/1086
(65 %)
15 diff
(98.7 %id)
BX341902   .j 1417 to 2380 1 to 952 E34S L35*     950/973
(97 %)
35 diff
(96.5 %id)
AA214354   .j 1423 to 1803 1 to 383       383/386
(99 %)
9 diff
(97.7 %id)
CN300576 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .j 1432 to 1973 1 to 543 exact     543/543
(100 %)
1 diff
(99.9 %id)
AA374327 lung .j 1714 to 1997 1 to 285 R6X Q65X     285/285
(100 %)
1 diff
(99.7 %id)
AW963709   .j 1715 to 2259 1 to 538 exact     538/595
(90 %)
11 diff
(98.2 %id)
AA115842   .j 1715 to 2182 1 to 468 R7X     468/468
(100 %)
12 diff
(97.5 %id)
CD679152 eye, Trabecular meshwork .j 1850 to 2436 1 to 587       587/587
(100 %)
0 diff
(100 %id)
CD677190 eye, Trabecular meshwork .j 1992 to 2496 1 to 505   tiling clone,   505/505
(100 %)
1 diff
(99.9 %id)
FN048812 breast carcinoma .j 2004 to 2088 1 to 85       85/86
(98 %)
1 diff
(98.9 %id)
DN920653   .j 2101 to 2474 1 to 374       374/374
(100 %)
0 diff
(100 %id)
FN155083 breast carcinoma .j 2134 to 2247 117 to 4     Submitted on the opposite strand 114/117
(97 %)
0 diff
(100 %id)
FN094025 breast carcinoma .j 2152 to 2253 102 to 3     Submitted on the opposite strand 100/103
(97 %)
0 diff
(100 %id)
BQ082033 stomach .j 2187 to 2335 1 to 145       145/145
(100 %)
7 diff
(95.2 %id)
BG942806 blood .j 2287 to 2815 562 to 34   AAA   529/529
(100 %)
2 diff
(99.7 %id)
AI590300 Kidney .j 2297 to 2852 559 to 4       556/559
(99 %)
0 diff
(100 %id)
BE739443 hypernephroma, Kidney .j 2323 to 2796 478 to 1       478/478
(100 %)
10 diff
(98.0 %id)
TI_149297343   .j 2453 to 3377 993 to 83   AAA   911/975
(93 %)
25 diff
(97.5 %id)
TI_149297520   .j 2520 to 3369 920 to 77   AAA   844/977
(86 %)
20 diff
(98.0 %id)
BG540048 lung .j 2590 to 3402 1 to 806       806/808
(99 %)
22 diff
(97.3 %id)
DB324814   .j 2669 to 3194 526 to 1       526/526
(100 %)
1 diff
(99.9 %id)
BM982422 lung, Primary Lung Cystic Fibrosis EpithelialCells .j 2671 to 3377 725 to 19   tiling clone, AAA   707/707
(100 %)
1 diff
(99.9 %id)
CA311043 Human Lung Epithelial cells, lung .j 2692 to 2938 233 to 478   AAA Submitted on the opposite strand 246/478
(51 %)
6 diff
(98.8 %id)
BM982570 lung, Primary Lung Cystic Fibrosis EpithelialCells .j 2700 to 3369 688 to 19   AAA   670/670
(100 %)
1 diff
(99.9 %id)
AA115170   .j 2769 to 3180 413 to 1       413/415
(99 %)
4 diff
(99.1 %id)
BF740040 Kidney .j 2782 to 3200 421 to 3       419/421
(99 %)
0 diff
(100 %id)
AI633342 pooled germ cell tumors .j 2853 to 3370 518 to 1       518/518
(100 %)
2 diff
(99.7 %id)
BX341901   .j 2879 to 3318 445 to 1       445/959
(46 %)
5 diff
(99.5 %id)
AA493707 thyroid .j 2893 to 3377 495 to 11   AAA   485/485
(100 %)
1 diff
(99.8 %id)
AW661922 2 pooled high-grade transitional celltumors, genitourinary tract .j 2926 to 3379 461 to 8       454/461
(98 %)
0 diff
(100 %id)
AI394735 B-cell, chronic lymphotic leukemia .j 2950 to 3377 443 to 16   AAA   428/428
(100 %)
2 diff
(99.6 %id)
BF433326 carcinoid, lung .j 2959 to 3349 1 to 391     Submitted on the opposite strand 391/391
(100 %)
1 diff
(99.8 %id)
AW971239   .j 2965 to 3377 540 to 128   AAA Submitted on the opposite strand 413/413
(100 %)
0 diff
(100 %id)
AI582576 adenocarcinoma, Pancreas .j 3124 to 3379 259 to 4       256/260
(98 %)
0 diff
(100 %id)
DN920654   .j 3140 to 3375 237 to 2       236/237
(99 %)
0 diff
(100 %id)
AA214252   .j 3148 to 3369 241 to 19   AAA   223/228
(97 %)
2 diff
(99.2 %id)
BI494052 cochlea, ear .j 3251 to 3921 687 to 18   tiling clone, AAA   670/670
(100 %)
1 diff
(99.9 %id)
CB986927 Pooled-Glandular .j 3291 to 3830 1 to 548   tiling clone,   548/806
(67 %)
28 diff
(96.6 %id)
AK098321 uterus .k-u 1 to 2340 2 to 2341 exact tiling clone, available from FLJ,   2341/2341
(100 %)
5 diff
(99.8 %id)
DB259847 uterus .k-u 1 to 571 2 to 572 exact capped   571/571
(100 %)
1 diff
(99.9 %id)
FN062361 breast carcinoma .k-u 248 to 354 1 to 107       107/107
(100 %)
0 diff
(100 %id)
DA827293 pericardium .k-u 328 to 887 2 to 562   capped   561/561
(100 %)
3 diff
(99.5 %id)
DA933816 Spleen .k-u 480 to 1067 2 to 589   tiling clone, capped   588/588
(100 %)
0 diff
(100 %id)
BG701244 brain, hippocampus .l-u 1 to 736 1 to 738 exact available from MGC,   738/741
(99 %)
6 diff
(99.2 %id)
BC045714 Brain, hippocampus .l-u 6 to 1622 1 to 1619 exact tiling clone, available from MGC, AAA   1619/1619
(100 %)
4 diff
(99.8 %id)
CR594222 T cells (Jurkat cell line) Cot10-normalized .l-u 59 to 1574 1 to 1516 exact tiling clone,   1516/1516
(100 %)
0 diff
(100 %id)
AL557870 T cells from T cell leukemia .l-u 59 to 1014 1 to 949 exact fully sequenced,   949/949
(100 %)
8 diff
(99.2 %id)
BC032531 Uterus, leiomyosarcoma .l-u 71 to 1628 12 to 1569 exact available from MGC, AAA   1558/1558
(100 %)
5 diff
(99.7 %id)
BM474361 leiomyosarcoma, uterus .l-u 71 to 1032 1 to 976 exact available from MGC,   976/985
(99 %)
17 diff
(98.3 %id)
CR981717 T-Lymphocytes .l-u 194 to 811 1 to 620 exact     620/620
(100 %)
2 diff
(99.7 %id)
AW468414 myeloid cells, 18 pooled CML cases, BCR/ABLrearrangement positive, includes both chronic phase andmyeloid blast crisis, whole blood .l-u 636 to 1041 409 to 4       406/409
(99 %)
0 diff
(100 %id)
N53268 multiple sclerosis lesions .l-u 659 to 850 1 to 193       193/195
(98 %)
5 diff
(97.5 %id)
AL579823 T cells from T cell leukemia .l-u 984 to 1574 590 to 1   fully sequenced,   590/590
(100 %)
11 diff
(98.2 %id)
BU753549 placenta .l-u 1043 to 1628 603 to 18   AAA   586/586
(100 %)
2 diff
(99.7 %id)
BQ574575 Chondrosarcoma Grade II, Left Pelvis .l-u 1145 to 1623 496 to 19   AAA   478/478
(100 %)
5 diff
(99.0 %id)
N48071 multiple sclerosis lesions .l-u 1182 to 1628 454 to 1       454/457
(99 %)
8 diff
(98.3 %id)
N48075 multiple sclerosis lesions .l-u 1294 to 1630 347 to 7       341/348
(97 %)
0 diff
(100 %id)
DA283341 corpus callosum .l-u 1363 to 1645 2 to 285   capped   284/555
(51 %)
4 diff
(99.3 %id)
AI242379 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .l-u 1381 to 1624 244 to 1       244/244
(100 %)
0 diff
(100 %id)
AW891051 nervous_tumor .m-u 1 to 423 433 to 6 D21E tiling clone,   428/433
(98 %)
0 diff
(100 %id)
H68956 liver and spleen .m-u 352 to 773 1 to 424   tiling clone, fully sequenced,   424/424
(100 %)
8 diff
(98.2 %id)
H68926 liver and spleen .m-u 769 to 1175 416 to 1   tiling clone, fully sequenced,   416/416
(100 %)
16 diff
(96.2 %id)
AW138818   .n-u 1 to 572 591 to 16 L37F F38L tiling clone,   576/591
(97 %)
0 diff
(100 %id)
BI001220 head_normal .n-u 14 to 531 521 to 1   tiling clone,   521/521
(100 %)
6 diff
(98.9 %id)
DA108294 cerebellum .o 1 to 559 2 to 560 exact tiling clone, capped   559/559
(100 %)
2 diff
(99.7 %id)
T05712   .p-u 1 to 283 1 to 283 M65X tiling clone,   283/283
(100 %)
0 diff
(100 %id)
DB310752 subthalamic nucleus Gene SMEK2, variant not shown              
DA366920 subthalamic nucleus Gene SMEK2, variant not shown       capped      
DA366926 subthalamic nucleus Gene SMEK2, variant not shown       capped      
BX097872 Kidney Gene SMEK2, variant not shown       AAA      
BY795739 eye Gene SMEK2, variant not shown              
N79033 lung Gene SMEK2, variant not shown              
W19649 lung Gene SMEK2, variant not shown              
223 other accessions, mainly redundant or of lesser quality, also belong to this gene but are not reported.
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i-u, .j, .k-u, .l-u, .m-u, .n-u, .o, .p-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI