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Gene KIAA1377TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
129 supporting clones for gene KIAA1377 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DB455438 testis .a 1 to 709 1 to 709   tiling clone,   709/709
(100 %)
7 diff
(99.1 %id)
NM_020802.2   .a 1 to 7043 1 to 7043 exact RefSeq,   7043/7043
(100 %)
0 diff
(100 %id)
DR000403 fetal brain .a 3 to 653 9 to 659       651/659
(98 %)
8 diff
(98.8 %id)
DB459153 testis .a 4 to 721 1 to 716       716/716
(100 %)
8 diff
(98.9 %id)
BI458807 testis .a 4 to 750 1 to 749   available from MGC,   749/759
(98 %)
39 diff
(94.9 %id)
DB727733 testis .a 8 to 727 1 to 716       716/716
(100 %)
10 diff
(98.7 %id)
BC036525 testis .a 8 to 4009 6 to 4009 G238C C383M E384* available from MGC, AAA   4004/4004
(100 %)
7 diff
(99.9 %id)
DB231935 trachea .a 9 to 599 2 to 592   capped   591/591
(100 %)
2 diff
(99.7 %id)
AJ707339 heart .a 11 to 518 520 to 13     Submitted on the opposite strand 512/529
(96 %)
1 diff
(99.9 %id)
DA196345 amygdala .a 12 to 582 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DB062246 testis .a 12 to 546 2 to 537   capped   536/536
(100 %)
1 diff
(99.9 %id)
DB443098 testis .a 14 to 686 1 to 673       673/674
(99 %)
5 diff
(99.3 %id)
BC146807 Clones donated by RIKEN .a 14 to 4012 1 to 4000 G238C E732R E733R S734K K735* tiling clone, AAA   4000/4000
(100 %)
5 diff
(99.9 %id)
DA508823 brain .a 15 to 564 2 to 552   capped   551/551
(100 %)
2 diff
(99.7 %id)
BQ269935 Pancreas, Purified pancreatic islet .a 18 to 458 1 to 441   fully sequenced,   441/441
(100 %)
0 diff
(100 %id)
BQ270036 Pancreas, Purified pancreatic islet .a 18 to 543 1 to 526   fully sequenced,   526/526
(100 %)
0 diff
(100 %id)
BF757865 colon .a 225 to 378 1 to 154       154/154
(100 %)
7 diff
(95.5 %id)
BX647415 human colon endothel primary cell culture .a 251 to 2157 1 to 1907   available from DKFZ, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 1907/1920
(99 %)
3 diff
(99.9 %id)
DA242039 brain .a 270 to 833 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
BQ286592 Pancreas, Purified pancreatic islet .a 428 to 808 381 to 1   fully sequenced,   381/381
(100 %)
0 diff
(100 %id)
DN831627 pooled .a 433 to 1093 1 to 662       662/662
(100 %)
3 diff
(99.6 %id)
DN831628 pooled .a 468 to 1066 600 to 1     Submitted on the opposite strand 600/600
(100 %)
16 diff
(97.4 %id)
BQ286696 Pancreas, Purified pancreatic islet .a 488 to 808 321 to 1   fully sequenced,   321/321
(100 %)
0 diff
(100 %id)
AV745121 Pituitary .a 501 to 1029 1 to 526   tiling clone,   526/662
(79 %)
25 diff
(96.3 %id)
AB037798 brain .a 658 to 4573 1 to 3916   tiling clone, available from KIAA,   3916/3916
(100 %)
3 diff
(100.0 %id)
DB092126 testis .a 807 to 1339 2 to 534   capped   533/533
(100 %)
1 diff
(99.9 %id)
DA782613 brain .a 1095 to 1666 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA206093 brain .a 1119 to 1689 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DA312391 hippocampus .a 1183 to 1745 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DA398936 thalamus .a 1298 to 1869 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
CN358247 embryonic stem cells, DMSO-treated H9 cellline .a 1427 to 1787 1 to 361       361/361
(100 %)
0 diff
(100 %id)
BU852775 testis .a 1434 to 2093 1 to 666       666/791
(84 %)
27 diff
(96.6 %id)
AA992716   .a 1505 to 1871 367 to 1       367/367
(100 %)
2 diff
(99.5 %id)
AW970276   .a 1582 to 1887 35 to 338   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 304/389
(78 %)
5 diff
(98.8 %id)
AW972164   .a 1582 to 1867 286 to 1     Submitted on the opposite strand 286/413
(69 %)
1 diff
(99.8 %id)
AA534513 colon .a 1614 to 1868 255 to 1       255/255
(100 %)
2 diff
(99.3 %id)
DB043303 testis .a 1676 to 2252 2 to 578   capped   577/577
(100 %)
2 diff
(99.7 %id)
DB031161 testis .a 1725 to 2316 2 to 595   capped   594/594
(100 %)
4 diff
(99.4 %id)
CN358249 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 2089 to 2796 1 to 708       708/708
(100 %)
3 diff
(99.6 %id)
CN358246 embryonic stem cells, DMSO-treated H9 cellline .a 2365 to 3019 8 to 662       655/662
(98 %)
6 diff
(99.1 %id)
DA682367 ovary .a 2822 to 3383 2 to 563   capped   562/562
(100 %)
2 diff
(99.7 %id)
DA363181 subthalamic nucleus .a 2910 to 3458 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
BG198993   .a 3230 to 4028 808 to 11     Submitted on the opposite strand 798/857
(93 %)
24 diff
(97.2 %id)
DB524639 testis .a 3297 to 4009 8 to 718     Submitted on the opposite strand 711/718
(99 %)
7 diff
(99.1 %id)
DB515281 testis .a 3305 to 4009 7 to 710     Submitted on the opposite strand 704/710
(99 %)
6 diff
(99.2 %id)
DB520856 testis .a 3307 to 4009 1 to 703     Submitted on the opposite strand 703/703
(100 %)
2 diff
(99.8 %id)
DB525601 testis .a 3322 to 4036 1 to 712     Submitted on the opposite strand 712/712
(100 %)
7 diff
(99.1 %id)
DB508020 testis .a 3346 to 4012 1 to 667     Submitted on the opposite strand 667/667
(100 %)
4 diff
(99.5 %id)
TI_154004697   .a 3403 to 4009 716 to 107   AAA   610/1252
(48 %)
7 diff
(99.5 %id)
BX642502   .a 3469 to 4008 559 to 15   AAA Submitted on the opposite strand 545/545
(100 %)
5 diff
(99.1 %id)
CA433735 mixed .a 3506 to 4009 522 to 19   AAA   504/504
(100 %)
0 diff
(100 %id)
DB239197 trachea .a 3536 to 4125 2 to 590   capped   589/589
(100 %)
2 diff
(99.7 %id)
BF966351 brain, hippocampus .a 3614 to 4363 1 to 752       752/877
(85 %)
25 diff
(97.2 %id)
DB476936 hippocampus .a 3619 to 4111 1 to 492       492/492
(100 %)
2 diff
(99.6 %id)
DB483603 hippocampus .a 3619 to 4068 1 to 450       450/450
(100 %)
1 diff
(99.8 %id)
DB483756 hippocampus .a 3619 to 4073 1 to 455       455/455
(100 %)
1 diff
(99.8 %id)
AA401311   .a 3650 to 4042 396 to 4       393/396
(99 %)
0 diff
(100 %id)
AI263506 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3670 to 4009 342 to 1       342/344
(99 %)
2 diff
(99.5 %id)
AA626870   .a 3733 to 4019 287 to 1       287/287
(100 %)
0 diff
(100 %id)
BM983332 lung, Primary Lung Epithelial Cells .a 3789 to 4009 239 to 19   AAA   221/232
(95 %)
0 diff
(100 %id)
AL045516 testis .a 3882 to 4577 1 to 695       695/695
(100 %)
4 diff
(99.5 %id)
T63766 lung .a 3905 to 4033 129 to 1       129/129
(100 %)
0 diff
(100 %id)
GD150996   .a 3971 to 4038 1 to 68   AAA   68/68
(100 %)
1 diff
(98.6 %id)
BX095711   .a 3999 to 4571 1 to 573       573/573
(100 %)
0 diff
(100 %id)
AA447012   .a 4021 to 4450 1 to 430   fully sequenced,   430/430
(100 %)
1 diff
(99.8 %id)
BP394988 pancreatic islet .a 4055 to 4384 1 to 330     Submitted on the opposite strand 330/330
(100 %)
0 diff
(100 %id)
AA854537 parathyroid gland, parathyroid tumor .a 4083 to 4499 1 to 417     Submitted on the opposite strand 417/417
(100 %)
1 diff
(99.8 %id)
AA446891   .a 4420 to 4589 170 to 1   tiling clone, fully sequenced,   170/170
(100 %)
2 diff
(98.9 %id)
AK095004 hippocampus .b 1 to 4021 2 to 4021 S89P E105G G194C S1033N tiling clone, available from FLJ,   4021/4021
(100 %)
7 diff
(99.9 %id)
DA299838 hippocampus .b 1 to 582 2 to 583   capped   582/582
(100 %)
2 diff
(99.7 %id)
DB307971 hippocampus .b 3480 to 4021 541 to 1   tiling clone,   541/543
(99 %)
1 diff
(99.9 %id)
AI291484 placenta .b 3753 to 4205 453 to 1   tiling clone,   453/453
(100 %)
0 diff
(100 %id)
CA848462 Pancreas, Purified pancreatic islet .b 4011 to 4583 1 to 574   tiling clone, fully sequenced,   574/574
(100 %)
2 diff
(99.7 %id)
AA112216 muscle, skeletal muscle .b 4012 to 4203 1 to 196       196/196
(100 %)
5 diff
(97.5 %id)
BU616953 Cell Line, Chondrosarcoma .b 4181 to 4913 750 to 18   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 733/733
(100 %)
1 diff
(99.9 %id)
BM690026 eye, Retina Foveal and Macular .b 4249 to 4673 1 to 425   fully sequenced,   425/425
(100 %)
5 diff
(98.9 %id)
TI_159714449   .b 4312 to 4913 689 to 88   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 602/987
(60 %)
1 diff
(99.9 %id)
CB306881 Human Lung Epithelial cells, lung .b 4312 to 4913 620 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 602/608
(99 %)
1 diff
(99.9 %id)
BU785174 Pancreas, Purified pancreatic islet .b 4323 to 4846 1 to 524       524/524
(100 %)
0 diff
(100 %id)
BQ637903 eye, retina .b 4452 to 5090 1 to 640       640/640
(100 %)
1 diff
(99.9 %id)
AW073574 connective tissue, five pooled sarcomas, including myxoidliposarcoma, solitary fibrous tumor, malignant fibroushistiocytoma, gastrointestinal stromal tumor, andmesothelioma .b 4464 to 4913 449 to 1       449/449
(100 %)
3 diff
(99.4 %id)
CX868029 embryonic stem .b 4507 to 5242 1 to 735   tiling clone,   735/735
(100 %)
1 diff
(99.9 %id)
TI_149272714   .b 4507 to 5122 674 to 60       615/1014
(60 %)
0 diff
(100 %id)
BU675269 lung, Primary Lung Epithelial Cells .b 4507 to 5116 610 to 1       610/618
(98 %)
1 diff
(99.9 %id)
CA848180 Pancreas, Purified pancreatic islet .b 4553 to 5097 545 to 1   fully sequenced,   545/545
(100 %)
0 diff
(100 %id)
AI797063 carcinoid, lung .b 4592 to 5097 506 to 1       506/506
(100 %)
0 diff
(100 %id)
AW418779 pooled .b 4634 to 5101 468 to 1       468/468
(100 %)
3 diff
(99.4 %id)
BM661748 eye, Retina Foveal and Macular .b 4643 to 5116 475 to 1   fully sequenced,   475/475
(100 %)
1 diff
(99.8 %id)
AA701120 pineal gland .b 4662 to 5098 436 to 1       436/436
(100 %)
1 diff
(99.8 %id)
AI348647 carcinoid, lung .b 4662 to 5097 436 to 1       436/436
(100 %)
0 diff
(100 %id)
AI333269 lung .b 4667 to 5097 431 to 1       431/431
(100 %)
0 diff
(100 %id)
BQ267650 insulinoma, Pancreas .b 4703 to 5098 1 to 396   AAA Possibly primed on the genome, locally A rich (19/19 A in genome downstream of last aligned base) 396/396
(100 %)
4 diff
(99.0 %id)
BQ272264 insulinoma, Pancreas .b 4705 to 5114 410 to 1       410/411
(99 %)
3 diff
(99.3 %id)
AA086248 muscle, skeletal muscle .b 4742 to 5101 363 to 1       363/468
(77 %)
7 diff
(98.6 %id)
CK905943 insulinoma, Pancreas .b 4827 to 5109 283 to 1       283/283
(100 %)
0 diff
(100 %id)
AA911420 carcinoid, lung .b 4933 to 5097 164 to 1       164/164
(100 %)
1 diff
(99.4 %id)
BU949959 Pancreas, Purified pancreatic islet .b 5134 to 5739 23 to 628   tiling clone,   606/628
(96 %)
6 diff
(99.1 %id)
BU950035 Pancreas, Purified pancreatic islet .b 5153 to 5715 1 to 563       563/563
(100 %)
0 diff
(100 %id)
BU784915 Pancreas, Purified pancreatic islet .b 5627 to 6137 511 to 1   tiling clone,   511/511
(100 %)
0 diff
(100 %id)
DB545627 hippocampus .b 5630 to 6138 1 to 510     Submitted on the opposite strand 510/510
(100 %)
3 diff
(99.5 %id)
DB552713 hippocampus .b 5663 to 6138 1 to 476     Submitted on the opposite strand 476/476
(100 %)
1 diff
(99.8 %id)
DB552540 hippocampus .b 5673 to 6138 1 to 466     Submitted on the opposite strand 466/466
(100 %)
1 diff
(99.8 %id)
CA428747 Bone, Subchondral Bone .b 5738 to 6306 587 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 569/569
(100 %)
2 diff
(99.7 %id)
BU949739 Pancreas, Purified pancreatic islet .b 5784 to 6305 523 to 1       523/523
(100 %)
1 diff
(99.9 %id)
BU949674 Pancreas, Purified pancreatic islet .b 5787 to 6305 520 to 1       520/520
(100 %)
1 diff
(99.9 %id)
CD104044 Pooled-Skin .b 5820 to 6270 1 to 452       452/467
(96 %)
4 diff
(99.2 %id)
CX867948 embryonic stem .b 6047 to 6677 650 to 20   tiling clone,   631/650
(97 %)
0 diff
(100 %id)
BF057799 pooled germ cell tumors .b 6159 to 6668 510 to 1       510/510
(100 %)
0 diff
(100 %id)
EL948024 eyeball .b 6201 to 6668 51 to 513   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 463/513
(90 %)
6 diff
(98.9 %id)
T15720   .b 6313 to 6668 357 to 1       357/358
(99 %)
3 diff
(99.2 %id)
BE218747 carcinoid, lung .b 6315 to 6672 359 to 2       358/359
(99 %)
0 diff
(100 %id)
AA057365.
matches multiple genes
eye, retina .b 6318 to 6675 358 to 1   tiling clone, also hits gene bloychee 358/358
(100 %)
0 diff
(100 %id)
G65610   .b 6375 to 6645 271 to 1     Submitted on the opposite strand 271/271
(100 %)
0 diff
(100 %id)
BQ380451 uterus_tumor .b 6489 to 6651 1 to 167       167/175
(95 %)
8 diff
(95.5 %id)
AK310418 testis .c 1 to 1528 1 to 1528   tiling clone,   1528/1528
(100 %)
2 diff
(99.9 %id)
DC401564 testis .c 1 to 543 1 to 543       543/543
(100 %)
0 diff
(100 %id)
BE142913 head_neck .c 646 to 1168 36 to 560       525/560
(93 %)
6 diff
(99.0 %id)
AK296350 thalamus .c 784 to 4533 1 to 3750 G39C T50A L645F S878N tiling clone,   3750/3750
(100 %)
6 diff
(99.9 %id)
DC342560 thalamus .c 784 to 1350 1 to 568       568/568
(100 %)
1 diff
(99.9 %id)
DC377306 brain .c 786 to 1278 1 to 494       494/494
(100 %)
2 diff
(99.6 %id)
CN358248 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 872 to 1580 1 to 707       707/707
(100 %)
4 diff
(99.5 %id)
DR001184 fetal brain .c 962 to 1734 9 to 780   tiling clone,   772/780
(98 %)
11 diff
(98.6 %id)
AV750049 Pituitary .c 1072 to 1628 1 to 549   tiling clone,   553/550
(100 %)
15 diff
(97.3 %id)
BX491092   .d 1 to 548 1 to 548   tiling clone,   548/548
(100 %)
4 diff
(99.3 %id)
DC333418 hippocampus .d 497 to 1005 1 to 509   tiling clone,   509/509
(100 %)
2 diff
(99.7 %id)
BF326427 amnion_normal .e 1 to 615 623 to 9 K14N V19F Q22P K24* tiling clone,   615/623
(98 %)
12 diff
(98.1 %id)
BQ291816 amnion_normal .e 251 to 618 372 to 8   tiling clone,   365/372
(98 %)
8 diff
(97.9 %id)
DB088516 testis .f 1 to 542 2 to 543 G39C S76Y I82T A103T tiling clone, capped   542/542
(100 %)
4 diff
(99.3 %id)
DB264344 uterus .g 1 to 579 2 to 581   tiling clone, capped   580/580
(100 %)
2 diff
(99.7 %id)
TI_149282136   .g 580 to 1208 703 to 77   AAA   627/1115
(56 %)
5 diff
(99.6 %id)
BM983692 lung, Primary Lung Epithelial Cells .g 580 to 1208 645 to 19   tiling clone, AAA   627/632
(99 %)
5 diff
(99.3 %id)
AK057230 testis .h-u 1 to 1760 8 to 1767 N51D tiling clone, available from FLJ,   1767/1767
(100 %)
2 diff
(99.9 %id)
DB019613 testis .h-u 1 to 830 8 to 831   capped   830/832
(99 %)
22 diff
(97.4 %id)
DB335650 testis .h-u 1244 to 1760 516 to 1       516/519
(99 %)
28 diff
(94.7 %id)
AB096255 brain Gene KIAA1377, variant not shown         Submitted on the opposite strand    
AK309479   Gene KIAA1377, variant not shown         This clone was ignored    
DB460159 testis Gene KIAA1377, variant not shown         This clone was ignored    
DA558111   Gene KIAA1377, variant not shown       capped This clone was ignored    
AA416915   Gene KIAA1377, variant not shown              
DB061241 testis Gene KIAA1377, variant not shown       capped      
DB339284 testis Gene KIAA1377, variant not shown              
DB238551 trachea Gene KIAA1377, variant not shown       capped      
DB350455 trachea Gene KIAA1377, variant not shown              
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI