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Gene ZFR2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
46 supporting clones for gene ZFR2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_015174.1   .a 1 to 4755 3 to 4757   RefSeq,   4757/4757
(100 %)
0 diff
(100 %id)
DA237746 brain .a 1 to 574 2 to 575   tiling clone, capped   574/574
(100 %)
1 diff
(99.9 %id)
AB029009 brain .a 121 to 4755 1 to 4635   tiling clone, available from KIAA,   4635/4635
(100 %)
4 diff
(100.0 %id)
CN427006 embryonic stem cells, cell lines H1, H7, andH9 .a 188 to 682 21 to 515   tiling clone,   495/515
(96 %)
11 diff
(97.9 %id)
DA359981 subthalamic nucleus .a 1352 to 1907 2 to 557   capped   556/556
(100 %)
3 diff
(99.5 %id)
AA719825 pineal gland .a 3847 to 4023 1 to 177     Submitted on the opposite strand 177/177
(100 %)
5 diff
(97.2 %id)
BX092621   .a 4274 to 4755 1 to 482   tiling clone, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 482/482
(100 %)
0 diff
(100 %id)
AI025800   .a 4329 to 4755 426 to 4       423/426
(99 %)
0 diff
(100 %id)
BF058458 fibrotheoma, ovary .a 4352 to 4767 1 to 416   tiling clone, Submitted on the opposite strand 416/416
(100 %)
2 diff
(99.6 %id)
Z39431 brain, total brain .a 4497 to 4747 258 to 8       251/258
(97 %)
0 diff
(100 %id)
AA778611   .a 4529 to 4755 242 to 16   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 227/227
(100 %)
0 diff
(100 %id)
BM929696 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 4562 to 4755 17 to 211   fully sequenced, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 195/211
(92 %)
6 diff
(97.2 %id)
BM930744 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 4562 to 4755 17 to 211   fully sequenced, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 195/211
(92 %)
6 diff
(97.2 %id)
BQ188800 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 4562 to 4755 17 to 211   fully sequenced, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 195/211
(92 %)
0 diff
(100 %id)
DR977868 brain .a 4572 to 4682 109 to 1       109/116
(93 %)
3 diff
(97.5 %id)
BM683636 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 4600 to 4755 174 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 156/156
(100 %)
0 diff
(100 %id)
BM685267 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 4600 to 4755 174 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 156/156
(100 %)
0 diff
(100 %id)
CK301166 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 4600 to 4755 174 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 156/156
(100 %)
0 diff
(100 %id)
AK295037 brain .b 1 to 1376 2 to 1377   tiling clone,   1377/1377
(100 %)
0 diff
(100 %id)
DA333602 hippocampus .c 1 to 596 3 to 598   tiling clone, capped   597/597
(100 %)
0 diff
(100 %id)
CV363066 breast_normal .d-u 1 to 435 1 to 432   tiling clone,   432/435
(99 %)
19 diff
(95.7 %id)
BM695760 eye, human retina .d-u 380 to 854 1 to 475   tiling clone, Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 475/475
(100 %)
0 diff
(100 %id)
BU736385 eye, human retina .d-u 863 to 1542 698 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 680/680
(100 %)
0 diff
(100 %id)
DB064412 testis .e 1 to 512 3 to 516 R157* tiling clone, capped   515/515
(100 %)
2 diff
(99.7 %id)
DB054306 testis .f 1 to 573 2 to 574 exact tiling clone, capped   573/573
(100 %)
0 diff
(100 %id)
NR_027149.1   .g 1 to 1028 3 to 1030 exact RefSeq, tiling clone, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 1030/1030
(100 %)
0 diff
(100 %id)
BI754220 brain .g 4 to 825 1 to 818       818/820
(99 %)
20 diff
(97.6 %id)
TI_57217489   .g 4 to 825 67 to 884       818/886
(92 %)
26 diff
(97.1 %id)
H87202 eye, retina .g 12 to 342 1 to 332       332/332
(100 %)
7 diff
(97.9 %id)
AL365406   .g 13 to 1028 1 to 1016   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 1016/1016
(100 %)
3 diff
(99.8 %id)
CN429472 embryonic stem cells, DMSO-treated H9 cellline .g 61 to 379 13 to 331       322/331
(97 %)
6 diff
(98.2 %id)
CN429475 embryonic stem cells, cell lines H1, H7, andH9 .g 61 to 721 11 to 671       664/671
(98 %)
13 diff
(98.1 %id)
CR593500 fetal brain .g 61 to 1031 1 to 971       971/971
(100 %)
0 diff
(100 %id)
AL536290 brain, fetal brain .g 61 to 937 1 to 877       877/877
(100 %)
3 diff
(99.7 %id)
H87203 eye, retina .g 650 to 1001 362 to 1       362/367
(98 %)
11 diff
(97.1 %id)
BM690243 eye, human retina .h 1 to 364 9 to 372 I22T R101K tiling clone, Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 364/372
(97 %)
7 diff
(98.2 %id)
BX115795 whole brain .h 456 to 995 555 to 16   tiling clone, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 540/541
(99 %)
0 diff
(100 %id)
BM662088 eye, human retina .h 510 to 996 505 to 19   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 487/487
(100 %)
4 diff
(99.2 %id)
EL948365 eyeball .h 611 to 1005 426 to 32     Submitted on the opposite strand 395/537
(73 %)
0 diff
(100 %id)
AV752903 Pituitary .h 766 to 996 1 to 231   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 231/231
(100 %)
0 diff
(100 %id)
BX430955 brain, fetal brain .h 798 to 999 1 to 201   tiling clone,   201/206
(97 %)
4 diff
(98.1 %id)
DA805040 brain .i 1 to 491 3 to 494 A97C R98Q S99E Y100L E101* tiling clone, capped   493/494
(99 %)
3 diff
(99.4 %id)
BC034005 Brain, hippocampus .j 1 to 864 7 to 870   tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 870/870
(100 %)
6 diff
(99.4 %id)
NM_001145640.1   .j 1 to 864 3 to 866   RefSeq, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 866/866
(100 %)
0 diff
(100 %id)
CN429474 embryonic stem cells, DMSO-treated H9 cellline .j 6 to 526 1 to 521   tiling clone,   521/521
(100 %)
2 diff
(99.7 %id)
F04999 brain, total brain Gene ZFR2, variant not shown              
F08715 brain, total brain Gene ZFR2, variant not shown              
CN429473 embryonic stem cells, cell lines H1, H7, andH9 Gene ZFR2, variant not shown         This clone was ignored    
AW877273 pnet Gene ZFR2, variant not shown              
AW877275 pnet Gene ZFR2, variant not shown              
H15092 whole brain Gene ZFR2, variant not shown         Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base)    
H15093 whole brain Gene ZFR2, variant not shown       AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base)    
T57778 lung Gene ZFR2, variant not shown              
T82338 lung Gene ZFR2, variant not shown              
BG912521 anaplastic oligodendroglioma with 1p/19qloss, brain Gene ZFR2, variant not shown         Submitted on the opposite strand    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d-u, .e, .f, .g, .h, .i, .j Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C