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Gene TCF25andMC1RandTUBB3TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
825 representative clones for gene TCF25andMC1RandTUBB3 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DB011371 colon, tumor tissue .a 1 to 583 4 to 586   tiling clone, capped   585/585
(100 %)
0 diff
(100 %id)
AL552592 placenta, Placenta Cot 25-normalized .a 4 to 995 10 to 999       990/999
(99 %)
6 diff
(99.4 %id)
BM464123 melanotic melanoma, skin .a 5 to 857 1 to 856       856/1101
(77 %)
23 diff
(98.0 %id)
BM083450 melanotic melanoma, skin .a 6 to 665 1 to 661       661/661
(100 %)
3 diff
(99.6 %id)
BG769353 melanotic melanoma, high MDR (cell line), skin .a 6 to 590 1 to 586       586/587
(99 %)
4 diff
(99.4 %id)
BQ653378 hepatocellular carcinoma, cell line, Liver .a 7 to 820 1 to 826       826/957
(86 %)
23 diff
(97.6 %id)
BE385621 melanotic melanoma, skin .a 27 to 672 1 to 662       662/731
(90 %)
35 diff
(95.3 %id)
BG437263 large cell carcinoma, lung .a 35 to 815 1 to 787       787/952
(82 %)
35 diff
(96.4 %id)
CD614714   .a 36 to 830 1 to 800       800/800
(100 %)
20 diff
(97.5 %id)
CD614716   .a 36 to 702 1 to 671       671/671
(100 %)
13 diff
(98.1 %id)
CD614718   .a 36 to 832 1 to 802       802/802
(100 %)
17 diff
(97.9 %id)
CD614720   .a 36 to 802 1 to 771       771/771
(100 %)
14 diff
(98.2 %id)
BM424081 amelanotic melanoma, cell line, skin .a 38 to 826 1 to 795       795/935
(85 %)
14 diff
(98.6 %id)
BM809469 amelanotic melanoma, cell line, skin .a 39 to 710 1 to 675       675/1159
(58 %)
37 diff
(96.9 %id)
BM911907 amelanotic melanoma, cell line, skin .a 39 to 744 1 to 709       709/1025
(69 %)
28 diff
(97.3 %id)
DN993186 brain, whole brain .a 103 to 854 8 to 759       752/759
(99 %)
6 diff
(99.3 %id)
BM549212 melanotic melanoma, skin .a 104 to 952 1 to 849       849/1081
(78 %)
8 diff
(99.3 %id)
BU196432 melanotic melanoma, cell line, skin .a 178 to 820 76 to 720       645/1106
(58 %)
6 diff
(99.5 %id)
BG104273 melanotic melanoma, skin .a 204 to 1012 1 to 802       802/919
(87 %)
23 diff
(97.5 %id)
BG397084 melanotic melanoma, skin .a 204 to 977 1 to 768       768/771
(99 %)
25 diff
(96.8 %id)
BE386884 melanotic melanoma, skin .a 208 to 608 16 to 417       402/417
(96 %)
6 diff
(98.6 %id)
BE407321 choriocarcinoma, placenta .a 223 to 839 1 to 618       618/618
(100 %)
3 diff
(99.6 %id)
BE385328 melanotic melanoma, skin .a 224 to 721 1 to 498       498/499
(99 %)
1 diff
(99.8 %id)
BE744777 adenocarcinoma cell line, ovary .a 224 to 1023 1 to 804       804/1108
(72 %)
16 diff
(98.6 %id)
BG114850 duodenal adenocarcinoma, cell line, small intestine .a 255 to 1010 28 to 786       759/788
(96 %)
10 diff
(98.8 %id)
BQ222929 melanotic melanoma, skin .a 281 to 963 12 to 702       691/937
(73 %)
27 diff
(97.2 %id)
BG476740 melanotic melanoma, skin .a 291 to 1134 1 to 862       862/1036
(83 %)
68 diff
(93.5 %id)
BC020171 Skin, melanotic melanoma. .a 292 to 3066 1 to 2775 exact tiling clone, available from MGC, AAA   2775/2775
(100 %)
0 diff
(100 %id)
BE277142 melanotic melanoma, skin .a 311 to 1090 1 to 773   available from MGC,   773/806
(95 %)
12 diff
(98.6 %id)
BE389884 endometrium, adenocarcinoma cell line, uterus .a 312 to 878 1 to 570       570/570
(100 %)
4 diff
(99.3 %id)
BX952662   .a 338 to 932 1 to 595       595/595
(100 %)
1 diff
(99.9 %id)
CF144723 CNCAP(3)T-225 cell line, Prostate .a 355 to 590 243 to 8     Submitted on the opposite strand 236/243
(97 %)
0 diff
(100 %id)
CD246176 mixed .a 378 to 893 1 to 520       520/1013
(51 %)
6 diff
(99.5 %id)
TI_1948105434   .a 381 to 1067 130 to 822   fully sequenced,   693/822
(84 %)
17 diff
(98.0 %id)
BT006971   .a 386 to 2777 1 to 2392       2392/2394
(99 %)
1 diff
(100.0 %id)
CV027033 mixed .a 386 to 943 1 to 558       558/558
(100 %)
1 diff
(99.9 %id)
TI_1948121259   .a 386 to 1112 130 to 868       739/1232
(59 %)
17 diff
(98.7 %id)
CO957269 mixed .a 388 to 986 67 to 664   fully sequenced,   598/664
(90 %)
3 diff
(99.6 %id)
CF144821 CNCAP(3)T-225 cell line, Prostate .a 432 to 590 166 to 8     Submitted on the opposite strand 159/166
(95 %)
0 diff
(100 %id)
BF973060 leiomyosarcoma cell line, uterus .a 494 to 1275 1 to 785       785/833
(94 %)
21 diff
(97.5 %id)
DB054415 testis .a 565 to 1134 2 to 572   capped   571/571
(100 %)
3 diff
(99.5 %id)
CR746720 melanotic melanoma, skin .a 644 to 1119 7 to 482       476/482
(98 %)
6 diff
(98.8 %id)
BM550365 melanotic melanoma, skin .a 648 to 1444 1 to 803       803/1140
(70 %)
20 diff
(98.3 %id)
AI820754 breast .a 752 to 1218 1 to 467       467/467
(100 %)
0 diff
(100 %id)
R72114 breast .a 752 to 1047 1 to 293       293/296
(98 %)
6 diff
(98.0 %id)
DB080159 testis .a 755 to 1325 2 to 572   capped   571/572
(99 %)
1 diff
(99.9 %id)
DB019703 testis .a 939 to 1483 2 to 546   capped   545/549
(99 %)
2 diff
(99.7 %id)
CO957267 mixed .a 956 to 1340 403 to 26   fully sequenced,   378/403
(93 %)
4 diff
(99.1 %id)
TI_1948105435   .a 1037 to 1344 447 to 121   fully sequenced,   327/447
(73 %)
6 diff
(98.7 %id)
EC545646 Prostate .a 1309 to 1400 1 to 92       92/92
(100 %)
2 diff
(97.9 %id)
CR606534 Placenta Cot 25-normalized .a 1483 to 3001 1 to 1519       1519/1519
(100 %)
0 diff
(100 %id)
BQ680106 melanotic melanoma, cell line, skin .a 1488 to 2353 1 to 874       874/887
(98 %)
13 diff
(98.6 %id)
T80551 whole brain .a 1489 to 1588 1 to 100       100/100
(100 %)
0 diff
(100 %id)
BQ891992 eye, normal pigmented retinal epithelium .a 1498 to 2374 1 to 878       878/879
(99 %)
5 diff
(99.5 %id)
BU943950 adenocarcinoma, cell line, breast .a 1503 to 2382 1 to 891       891/936
(95 %)
21 diff
(97.8 %id)
BQ939707 eye, normal pigmented retinal epithelium .a 1513 to 2412 1 to 902       902/910
(99 %)
8 diff
(99.2 %id)
BE251699 eye, retinoblastoma .a 1583 to 2096 1 to 515       515/515
(100 %)
8 diff
(98.5 %id)
BE254460 eye, retinoblastoma .a 1583 to 2261 1 to 674       674/717
(94 %)
19 diff
(97.4 %id)
BI159752 epithelioid carcinoma cell line, Pancreas .a 1587 to 2397 1 to 822       822/1010
(81 %)
32 diff
(96.9 %id)
BI160216 epithelioid carcinoma cell line, Pancreas .a 1587 to 2437 1 to 848       848/917
(92 %)
41 diff
(95.6 %id)
BI160342 epithelioid carcinoma cell line, Pancreas .a 1587 to 2414 1 to 813       813/814
(99 %)
23 diff
(97.2 %id)
BQ227636 epithelioid carcinoma, Pancreas .a 1587 to 2248 139 to 805       667/1297
(51 %)
18 diff
(98.7 %id)
CX757775 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 1587 to 2330 37 to 780     Submitted on the opposite strand 744/780
(95 %)
7 diff
(99.2 %id)
BF569403 Kidney, renal carcinoma (ascites) .a 1588 to 2281 1 to 690   fully sequenced,   690/690
(100 %)
12 diff
(98.3 %id)
CN295384 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 1591 to 2292 1 to 703       703/703
(100 %)
2 diff
(99.8 %id)
BQ962126 epithelioid carcinoma cell line, Pancreas .a 1592 to 2405 3 to 828       826/927
(89 %)
27 diff
(97.1 %id)
CX871085 embryonic stem .a 1593 to 2385 1 to 793       793/793
(100 %)
0 diff
(100 %id)
CX756896 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 1596 to 2314 1 to 719     Submitted on the opposite strand 719/719
(100 %)
0 diff
(100 %id)
CX865368 embryonic stem .a 1596 to 2406 19 to 828       810/828
(97 %)
6 diff
(99.3 %id)
AA351051 brain .a 1598 to 1942 1 to 344       344/344
(100 %)
2 diff
(99.5 %id)
BQ955020 large cell carcinoma, lung .a 1599 to 2518 28 to 948       921/948
(97 %)
11 diff
(98.9 %id)
BE885325 leiomyosarcoma, uterus .a 1603 to 2192 1 to 594       594/594
(100 %)
7 diff
(98.9 %id)
T33080 brain .a 1604 to 1806 1 to 202       202/202
(100 %)
4 diff
(98.1 %id)
TI_44170668   .a 1609 to 2200 79 to 670       592/670
(88 %)
8 diff
(98.9 %id)
BX442563 brain, fetal brain .a 1614 to 2421 1 to 807       807/903
(89 %)
7 diff
(99.3 %id)
BI553974 brain, hippocampus .a 1614 to 2200 1 to 587       587/587
(100 %)
1 diff
(99.9 %id)
BC047518 Brain, hippocampus .a 1614 to 2455 1 to 842   available from MGC,   842/842
(100 %)
0 diff
(100 %id)
BP254168 Kidney .a 1619 to 2201 1 to 584       584/584
(100 %)
10 diff
(98.3 %id)
DB498529 hypothalamus .a 1623 to 2167 1 to 545       545/545
(100 %)
3 diff
(99.5 %id)
BQ222867 large cell carcinoma, lung .a 1625 to 2322 11 to 717       707/914
(77 %)
21 diff
(97.8 %id)
AA312844   .a 1630 to 2153 1 to 523       523/523
(100 %)
4 diff
(99.3 %id)
BU149675 epidermoid carcinoma, cell line, salivary gland .a 1630 to 2487 1 to 859       859/993
(86 %)
14 diff
(98.6 %id)
CD512975 brain, Pituitary .a 1630 to 2112 80 to 563       484/1290
(37 %)
28 diff
(97.9 %id)
AW087097 brain, frontal lobe .a 1632 to 2078 1 to 447     Submitted on the opposite strand 447/448
(99 %)
3 diff
(99.4 %id)
AW162260 brain, frontal lobe .a 1633 to 2199 1 to 567     Submitted on the opposite strand 567/567
(100 %)
4 diff
(99.3 %id)
AW499000 brain .a 1635 to 1954 1 to 320       320/320
(100 %)
0 diff
(100 %id)
BI195227 brain, neuroblastoma .a 1635 to 2294 1 to 660       660/660
(100 %)
6 diff
(99.1 %id)
CX872311 embryonic stem .a 1635 to 2391 1 to 756       756/756
(100 %)
1 diff
(99.9 %id)
T39122 brain .a 1635 to 2074 1 to 441       441/441
(100 %)
5 diff
(98.9 %id)
BM783226 stomach .a 1648 to 2327 1 to 681       681/681
(100 %)
2 diff
(99.8 %id)
BM783301 stomach .a 1648 to 2288 1 to 641       641/641
(100 %)
1 diff
(99.9 %id)
BM783809 stomach .a 1648 to 2327 1 to 679       679/679
(100 %)
2 diff
(99.8 %id)
BM783525 stomach .a 1648 to 2295 1 to 648       648/648
(100 %)
1 diff
(99.9 %id)
BM772997 stomach .a 1648 to 2279 1 to 632       632/632
(100 %)
2 diff
(99.7 %id)
BM773030 stomach .a 1648 to 2218 1 to 571       571/571
(100 %)
1 diff
(99.9 %id)
BE783050 eye, retinoblastoma .a 1650 to 2414 1 to 769       769/950
(80 %)
20 diff
(97.9 %id)
BE793274 lung, small cell carcinoma .a 1657 to 2439 1 to 779       779/781
(99 %)
13 diff
(98.4 %id)
T39121 brain .a 1673 to 1887 1 to 214       214/214
(100 %)
1 diff
(99.6 %id)
AI929713 brain, frontal lobe .a 1674 to 2286 613 to 1     Submitted on the opposite strand 613/613
(100 %)
3 diff
(99.6 %id)
BE793397 lung, small cell carcinoma .a 1676 to 2028 1 to 353       353/750
(47 %)
1 diff
(99.9 %id)
BQ071377 brain, neuroblastoma, cell line .a 1680 to 2547 1 to 879       879/1052
(83 %)
23 diff
(97.9 %id)
BQ959384 leiomyosarcoma, uterus .a 1685 to 2506 1 to 823       823/907
(90 %)
12 diff
(98.7 %id)
BF981784 duodenal adenocarcinoma, cell line, small intestine .a 1690 to 2500 1 to 792       792/879
(90 %)
34 diff
(96.2 %id)
AL575839 placenta, Placenta Cot 25-normalized .a 2163 to 3032 874 to 9       866/947
(91 %)
0 diff
(100 %id)
BF570267 Kidney, renal carcinoma (ascites) .a 2252 to 3011 756 to 1   fully sequenced,   756/756
(100 %)
11 diff
(98.6 %id)
BX413734 brain, fetal brain .a 2421 to 3050 644 to 5       640/694
(92 %)
0 diff
(100 %id)
R38856 whole brain .a 2661 to 3066 420 to 11   AAA   410/410
(100 %)
17 diff
(95.9 %id)
BX358711 Placenta Cot 25-normalized .b 1 to 802 1 to 798   tiling clone,   798/856
(93 %)
14 diff
(98.4 %id)
CV810390 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .b 515 to 1222 1 to 708   tiling clone,   708/708
(100 %)
1 diff
(99.9 %id)
CD300118 testis .b 608 to 1464 30 to 889   tiling clone,   860/889
(96 %)
10 diff
(98.9 %id)
BP236484 coronary artery .b 657 to 1243 1 to 587       587/587
(100 %)
1 diff
(99.9 %id)
CN485224 eye .b 1084 to 1710 1 to 627   tiling clone,   627/627
(100 %)
2 diff
(99.7 %id)
BX392742 Placenta Cot 25-normalized .b 1778 to 2486 716 to 1   tiling clone,   716/949
(75 %)
15 diff
(98.5 %id)
DW442006 Liver .b 1861 to 2080 17 to 236   tiling clone,   220/236
(93 %)
12 diff
(95.0 %id)
BE928460 colon .b 1896 to 2126 240 to 1   tiling clone,   245/240
(102 %)
10 diff
(95.9 %id)
BI520205 brain, medulla .c 1 to 780 5 to 790   tiling clone,   788/791
(99 %)
13 diff
(98.4 %id)
TI_43963589   .c 1 to 780 40 to 825       788/826
(95 %)
21 diff
(97.5 %id)
BI520840 brain, medulla .c 1457 to 2251 819 to 9   tiling clone,   811/1073
(75 %)
26 diff
(97.6 %id)
TI_43963590   .c 1457 to 2251 819 to 9       811/1073
(75 %)
26 diff
(97.6 %id)
BX388193   .d -8 to 512 1 to 523   tiling clone,   523/636
(82 %)
15 diff
(97.7 %id)
BX335452 Placenta Cot 25-normalized .d 1 to 1034 2 to 1035   tiling clone,   1035/1035
(100 %)
8 diff
(99.3 %id)
BF947730 nervous_normal .d 981 to 1294 29 to 341   tiling clone,   313/341
(91 %)
6 diff
(98.3 %id)
BF909806 uterus_tumor .d 1012 to 1294 39 to 318       280/318
(88 %)
14 diff
(95.6 %id)
BX335451 Placenta Cot 25-normalized .d 1249 to 2307 1054 to 4   tiling clone,   1051/1054
(99 %)
11 diff
(99.0 %id)
TI_154103986   .d 1578 to 2340 831 to 68   AAA   766/950
(80 %)
22 diff
(97.7 %id)
CA306337 Alveolar Macrophage, lung .d 1587 to 2343 774 to 19   AAA   756/756
(100 %)
3 diff
(99.7 %id)
BF666492 brain, primitive neuroectoderm .d 1624 to 2092 1 to 468       468/468
(100 %)
6 diff
(98.8 %id)
BX388192   .d 1669 to 2316 663 to 1       605/663
(91 %)
28 diff
(95.8 %id)
CA446169 Chondrosarcoma, Left Pubic Bone .d 1751 to 2340 609 to 19   tiling clone, AAA   591/591
(100 %)
2 diff
(99.7 %id)
BE858427 brain, glioblastoma (pooled) .d 1794 to 2346 556 to 4   tiling clone,   553/556
(99 %)
0 diff
(100 %id)
BE855378 brain, glioblastoma (pooled) .d 1798 to 2346 549 to 1       549/549
(100 %)
1 diff
(99.9 %id)
AW027403 thymus, pooled .d 1848 to 2342 498 to 4       495/498
(99 %)
0 diff
(100 %id)
BX423157 adult brain, brain .d 1854 to 2312 446 to 1       446/603
(73 %)
18 diff
(97.1 %id)
BE467974 carcinoid, lung .d 1880 to 2339 460 to 1       460/460
(100 %)
1 diff
(99.8 %id)
AA765224 germinal center B cell .d 1895 to 2289 392 to 1       392/392
(100 %)
3 diff
(99.3 %id)
AW001999 thymus, pooled .d 1925 to 2340 433 to 18       416/433
(96 %)
0 diff
(100 %id)
BX338447 Placenta Cot 25-normalized .e 1 to 1014 1 to 1014   tiling clone,   1014/1014
(100 %)
1 diff
(100.0 %id)
BU520930 leiomyosarcoma, uterus .e 97 to 952 1 to 857       857/857
(100 %)
3 diff
(99.7 %id)
TI_154176660   .e 245 to 927 95 to 778       684/1005
(68 %)
19 diff
(98.2 %id)
BG168715 hypernephroma, cell line, Kidney .e 327 to 1008 1 to 674       674/959
(70 %)
19 diff
(98.1 %id)
CN262354 embryonic stem cells, DMSO-treated H9 cellline .e 788 to 1521 1 to 734   tiling clone,   734/734
(100 %)
2 diff
(99.8 %id)
BX338446 Placenta Cot 25-normalized .e 1214 to 2257 1056 to 14   tiling clone,   1043/1056
(98 %)
9 diff
(99.2 %id)
BX426558 T cells (Jurkat cell line) .f 1 to 933 1 to 931   tiling clone,   931/1008
(92 %)
15 diff
(98.6 %id)
CR989518 T-Lymphocytes .f 19 to 579 1 to 561       561/561
(100 %)
0 diff
(100 %id)
BI913551 brain .f 22 to 743 1 to 723       723/723
(100 %)
7 diff
(99.1 %id)
NM_014972.2   .f 22 to 2280 1 to 2259 exact RefSeq, AAA   2259/2259
(100 %)
0 diff
(100 %id)
BX463335 adult brain, brain .f 26 to 906 1 to 883       883/883
(100 %)
40 diff
(95.5 %id)
BI753947 brain .f 26 to 802 1 to 772       770/777
(99 %)
12 diff
(98.5 %id)
TI_57234558   .f 26 to 767 32 to 771       740/772
(95 %)
16 diff
(98.0 %id)
DB458928 testis .f 28 to 473 1 to 446       446/446
(100 %)
0 diff
(100 %id)
BI908794 leukocyte .f 29 to 767 1 to 737       737/738
(99 %)
10 diff
(98.7 %id)
BI603256 brain, hypothalamus .f 32 to 875 10 to 843       834/951
(87 %)
24 diff
(97.5 %id)
TI_45210689   .f 32 to 875 140 to 973       834/1081
(77 %)
24 diff
(97.8 %id)
BX362302   .f 37 to 802 1 to 767       767/767
(100 %)
2 diff
(99.8 %id)
BX353888 Neuroblastoma Cot 25-normalized .f 38 to 1121 1 to 1074       1074/1077
(99 %)
14 diff
(98.8 %id)
BX380107 Placenta Cot 25-normalized .f 38 to 775 1 to 739       739/739
(100 %)
1 diff
(99.9 %id)
AF322111   .f 40 to 2274 35 to 2267 exact     2233/2267
(98 %)
6 diff
(99.8 %id)
DQ321703   .f 40 to 2275 35 to 2268 exact     2234/2270
(98 %)
7 diff
(99.7 %id)
AL710912 human skeletal muscle .f 44 to 603 1 to 560       560/560
(100 %)
0 diff
(100 %id)
BC011884 Lymph, Burkitt lymphoma .f 48 to 2280 1 to 2233 exact tiling clone, available from MGC, AAA   2233/2233
(100 %)
0 diff
(100 %id)
BQ216424 large cell carcinoma, lung .f 49 to 924 1 to 882       882/906
(97 %)
16 diff
(98.3 %id)
BP356743 mammary gland .f 50 to 632 1 to 583       583/583
(100 %)
0 diff
(100 %id)
AI337983 uterus .f 56 to 472 1 to 417     Submitted on the opposite strand 417/417
(100 %)
0 diff
(100 %id)
BP283099 bone marrow .f 61 to 654 1 to 594       594/594
(100 %)
0 diff
(100 %id)
CB215161 normal endometrium, late proliferativephase, cycle day 13, uterus .f 65 to 600 1 to 536       536/536
(100 %)
0 diff
(100 %id)
BX359103 Placenta Cot 25-normalized .f 67 to 1124 1 to 1050       1050/1050
(100 %)
15 diff
(98.6 %id)
AL523622 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .f 68 to 1003 1 to 935       935/935
(100 %)
7 diff
(99.3 %id)
AI343837 2 pooled tumors (clear cell type), Kidney .f 68 to 490 423 to 1       423/423
(100 %)
0 diff
(100 %id)
BE268123 Burkitt lymphoma, lymph .f 68 to 732 1 to 663       663/665
(99 %)
3 diff
(99.6 %id)
BI758473 brain .f 68 to 859 1 to 796       796/796
(100 %)
11 diff
(98.7 %id)
TI_57215419   .f 68 to 859 1 to 796       796/796
(100 %)
11 diff
(98.7 %id)
BQ953272 leiomyosarcoma, uterus .f 73 to 802 1 to 736       734/905
(81 %)
15 diff
(98.4 %id)
BF529694 anaplastic oligodendroglioma with 1p/19qloss, brain .f 76 to 800 1 to 714       716/969
(73 %)
11 diff
(98.9 %id)
BQ072733 leukocyte .f 76 to 869 5 to 804       800/1082
(73 %)
16 diff
(98.6 %id)
BC009349 Brain, neuroblastoma .f 77 to 2277 1 to 2201 exact available from MGC, AAA   2201/2201
(100 %)
1 diff
(100.0 %id)
AI366044 brain, meningioma .f 77 to 525 1 to 449     Submitted on the opposite strand 449/449
(100 %)
0 diff
(100 %id)
BP340297 Spleen .f 81 to 651 1 to 571       571/580
(98 %)
0 diff
(100 %id)
BX463540 adult brain, brain .f 82 to 1125 1 to 1038       1040/1038
(100 %)
10 diff
(99.1 %id)
BM558193 astrocytoma grade IV, cell line, brain .f 83 to 933 1 to 852       852/1081
(78 %)
6 diff
(99.5 %id)
BX365805 Neuroblastoma Cot 10-normalized .f 84 to 895 1 to 812       812/812
(100 %)
1 diff
(99.9 %id)
BG765774 melanotic melanoma, high MDR (cell line), skin .f 84 to 826 1 to 741       741/741
(100 %)
5 diff
(99.4 %id)
DB506497 hypothalamus .f 85 to 562 1 to 478       478/478
(100 %)
0 diff
(100 %id)
BX374928 Neuroblastoma Cot 25-normalized .f 86 to 977 1 to 892       892/892
(100 %)
0 diff
(100 %id)
AL534725 brain, fetal brain .f 86 to 1121 1 to 1031       1033/1031
(100 %)
8 diff
(99.3 %id)
BI755631 brain .f 87 to 802 1 to 721       721/727
(99 %)
16 diff
(97.8 %id)
CB216318 normal endometrium, mid-secretory phase,cycle day 23, uterus .f 87 to 680 1 to 594       594/594
(100 %)
0 diff
(100 %id)
TI_159678108   .f 88 to 932 50 to 893       844/1075
(78 %)
6 diff
(99.5 %id)
BX417814 placenta .f 89 to 957 1 to 869       869/869
(100 %)
0 diff
(100 %id)
CF132254 Chondrosarcoma Lung Metastasis cell lines, lung .f 89 to 873 1 to 785       785/785
(100 %)
0 diff
(100 %id)
BQ893191 dorsal root ganglia .f 90 to 932 21 to 872       852/896
(95 %)
25 diff
(97.3 %id)
BQ672869 epidermoid carcinoma, cell line, salivary gland .f 91 to 891 1 to 807       807/884
(91 %)
11 diff
(98.8 %id)
DA168112 amygdala .f 92 to 669 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
BM808712 brain, hippocampus .f 94 to 932 9 to 850       842/1016
(82 %)
23 diff
(97.8 %id)
BC000959 Placenta, choriocarcinoma .f 99 to 2280 1 to 2182 exact available from MGC, AAA   2182/2182
(100 %)
1 diff
(100.0 %id)
BU175858 embryonal carcinoma, cell line, testis .f 102 to 932 1 to 838       838/880
(95 %)
7 diff
(99.3 %id)
BX336769 Placenta Cot 25-normalized .f 104 to 1059 1 to 954       955/954
(100 %)
5 diff
(99.5 %id)
TI_57201899   .f 104 to 828 35 to 762       728/762
(95 %)
13 diff
(98.3 %id)
TI_1948081636   .f 104 to 1035 135 to 1068       934/1326
(70 %)
22 diff
(98.4 %id)
TI_1948081858   .f 104 to 910 127 to 945       817/1165
(70 %)
52 diff
(95.6 %id)
TI_1948081859   .f 104 to 933 130 to 959       830/1272
(65 %)
17 diff
(98.7 %id)
TI_1948082073   .f 104 to 901 125 to 918       792/1133
(69 %)
34 diff
(97.0 %id)
TI_1948082074   .f 104 to 938 131 to 965       835/1276
(65 %)
17 diff
(98.7 %id)
TI_1948082281   .f 104 to 926 130 to 959       830/1337
(62 %)
29 diff
(97.9 %id)
TI_1948154440   .f 104 to 941 129 to 967       839/1275
(65 %)
17 diff
(98.7 %id)
TI_1948154756   .f 104 to 933 123 to 949       827/1309
(63 %)
16 diff
(98.8 %id)
BY798258 eye .f 106 to 488 1 to 383       383/383
(100 %)
0 diff
(100 %id)
BI822012 pooled brain, lung, testis .f 106 to 828 1 to 726       726/726
(100 %)
7 diff
(99.1 %id)
BQ959783 leiomyosarcoma, uterus .f 108 to 932 1 to 823       823/935
(88 %)
11 diff
(98.9 %id)
BM919849 pooled pancreas and spleen .f 109 to 900 1 to 799       797/1098
(72 %)
17 diff
(98.5 %id)
BU507546 leiomyosarcoma, uterus .f 109 to 899 1 to 802       802/924
(86 %)
15 diff
(98.4 %id)
BU146119 dorsal root ganglia .f 111 to 932 1 to 831       831/870
(95 %)
16 diff
(98.2 %id)
BF000251 colon, colon tumor, RER+ .f 124 to 486 363 to 1       363/363
(100 %)
0 diff
(100 %id)
BF063423 colon, colon tumor, RER+ .f 124 to 484 361 to 1       361/361
(100 %)
0 diff
(100 %id)
AI337445 colon, colon tumor, RER+ .f 130 to 484 355 to 1       355/355
(100 %)
0 diff
(100 %id)
AI763342 colon, colon tumor, RER+ .f 134 to 486 353 to 1       353/353
(100 %)
0 diff
(100 %id)
BU932019 ovary, teratocarcinoma, cell line .f 151 to 1056 1 to 906       906/906
(100 %)
1 diff
(99.9 %id)
CN262352 embryonic stem cells, cell lines H1, H7, andH9 .f 154 to 756 1 to 603       603/603
(100 %)
0 diff
(100 %id)
CN262348 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .f 210 to 841 1 to 632       632/632
(100 %)
0 diff
(100 %id)
AW081858 esophagus, squamous cell carcinoma .f 247 to 497 251 to 1       251/251
(100 %)
0 diff
(100 %id)
BQ882039 brain, neuroblastoma, cell line .f 255 to 1167 1 to 916       916/921
(99 %)
17 diff
(98.2 %id)
AA923051 Kidney .f 288 to 487 200 to 1       200/200
(100 %)
0 diff
(100 %id)
CN262355 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .f 305 to 1043 8 to 746       739/746
(99 %)
6 diff
(99.2 %id)
BU957656 adenocarcinoma, cell line, breast .f 305 to 1122 1 to 831       831/959
(86 %)
38 diff
(96.1 %id)
BG742665 skin .f 312 to 1126 1 to 811       811/826
(98 %)
8 diff
(99.1 %id)
AA905962 pooled .f 330 to 490 161 to 1       161/161
(100 %)
0 diff
(100 %id)
BM545617 ovary (pool of 3) .f 356 to 1316 1 to 962       962/962
(100 %)
15 diff
(98.5 %id)
BG010273 placenta_normal .f 358 to 860 1 to 503       503/503
(100 %)
0 diff
(100 %id)
AB028972 brain .f 481 to 2274 1 to 1794   available from KIAA,   1794/1794
(100 %)
0 diff
(100 %id)
BM561401 blood, natural killer cells, cell line .f 506 to 1483 1 to 971       971/1008
(96 %)
14 diff
(98.7 %id)
BU957782 adenocarcinoma, cell line, breast .f 516 to 1387 38 to 913       878/915
(95 %)
16 diff
(98.3 %id)
BU558002 adenocarcinoma, cell line, breast .f 519 to 1458 1 to 946       946/948
(99 %)
29 diff
(97.0 %id)
AI174892 Liver .f 520 to 962 1 to 443       443/443
(100 %)
0 diff
(100 %id)
CX163529 human embryonic stem cells differentiated toan early endodermal cell type .f 522 to 1397 22 to 897       876/897
(97 %)
0 diff
(100 %id)
BE780670 eye, retinoblastoma .f 527 to 1306 1 to 777       777/802
(96 %)
10 diff
(98.8 %id)
BQ219129 leiomyosarcoma, uterus .f 543 to 1482 1 to 954       954/966
(98 %)
23 diff
(97.7 %id)
BP385653 pancreatic islet .f 546 to 1058 513 to 1       513/513
(100 %)
0 diff
(100 %id)
BG009889 placenta_normal .f 555 to 979 425 to 1       425/425
(100 %)
0 diff
(100 %id)
BE279763 choriocarcinoma, placenta .f 561 to 1208 1 to 647       647/648
(99 %)
3 diff
(99.6 %id)
BG675533 skin, squamous cell carcinoma .f 577 to 1409 1 to 833       831/835
(99 %)
7 diff
(99.2 %id)
CR994544 T-Lymphocytes .f 580 to 1377 1 to 799       799/799
(100 %)
2 diff
(99.8 %id)
BE733117 choriocarcinoma, placenta .f 595 to 1394 1 to 795       795/801
(99 %)
18 diff
(97.8 %id)
T31085 brain .f 604 to 939 1 to 336       336/336
(100 %)
0 diff
(100 %id)
DR760960 embryonic stem .f 663 to 1453 1 to 791       791/791
(100 %)
0 diff
(100 %id)
TI_154163163   .f 668 to 1388 80 to 796       717/718
(99 %)
15 diff
(98.0 %id)
BG742154 skin .f 669 to 1448 1 to 779       779/782
(99 %)
6 diff
(99.3 %id)
AA424369 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f 681 to 1243 1 to 563       563/563
(100 %)
5 diff
(99.2 %id)
BE901186 choriocarcinoma, placenta .f 686 to 1475 1 to 790       790/804
(98 %)
7 diff
(99.2 %id)
CR623529 Placenta Cot 25-normalized .f 734 to 2248 1 to 1515       1515/1515
(100 %)
0 diff
(100 %id)
BX378256 Placenta Cot 25-normalized .f 734 to 1478 1 to 744       744/744
(100 %)
2 diff
(99.8 %id)
BX385919 Placenta Cot 25-normalized .f 734 to 1719 1 to 982       982/985
(99 %)
5 diff
(99.5 %id)
M78835   .f 762 to 1055 1 to 294       294/294
(100 %)
0 diff
(100 %id)
BG759902 B-cells, primary B-cells from tonsils (cell line) .f 793 to 1545 1 to 752       752/752
(100 %)
7 diff
(99.1 %id)
BU538355 adenocarcinoma, cell line, breast .f 840 to 1732 1 to 895       895/946
(94 %)
3 diff
(99.7 %id)
CD513297 brain, Pituitary .f 842 to 1572 1 to 734       734/896
(81 %)
7 diff
(99.3 %id)
CN262344 embryonic stem cells, cell lines H1, H7, andH9 .f 899 to 1632 5 to 738       734/738
(99 %)
7 diff
(99.1 %id)
BM795004 Ascites, stomach .f 928 to 1437 1 to 510       510/510
(100 %)
0 diff
(100 %id)
BM805045 ovary (pool of 3) .f 938 to 1903 26 to 997       972/1087
(89 %)
10 diff
(99.1 %id)
BM744049 Ascites, stomach .f 943 to 1478 1 to 536       536/536
(100 %)
0 diff
(100 %id)
CA487761   .f 950 to 1823 1 to 875       875/882
(99 %)
6 diff
(99.4 %id)
CX870225 embryonic stem .f 957 to 1800 1 to 844       844/844
(100 %)
1 diff
(99.9 %id)
BU190433 hepatocellular carcinoma, cell line, Liver .f 997 to 1720 1 to 726       726/1125
(64 %)
11 diff
(99.1 %id)
BI259005 cervical carcinoma cell line, cervix .f 1006 to 1649 1 to 644       644/644
(100 %)
1 diff
(99.9 %id)
BI764550 pooled colon, kidney, stomach .f 1027 to 1757 1 to 730       730/730
(100 %)
1 diff
(99.9 %id)
TI_57152656   .f 1029 to 1757 62 to 788       727/788
(92 %)
7 diff
(99.2 %id)
CR589952 neuroblastoma .f 1037 to 2276 1 to 1240       1240/1240
(100 %)
0 diff
(100 %id)
BG685851 B-cells, primary B-cells from tonsils (cell line) .f 1055 to 1976 1 to 928       928/961
(96 %)
15 diff
(98.5 %id)
BF756460 colon .f 1089 to 1371 283 to 1     Submitted on the opposite strand 283/283
(100 %)
0 diff
(100 %id)
BF886500 testis_normal .f 1089 to 1370 282 to 1     Submitted on the opposite strand 282/282
(100 %)
0 diff
(100 %id)
BF887500 testis_normal .f 1089 to 1370 282 to 1     Submitted on the opposite strand 282/282
(100 %)
0 diff
(100 %id)
BF685693 leiomyosarcoma cell line, uterus .f 1094 to 1820 1 to 725       725/890
(81 %)
8 diff
(99.2 %id)
BQ691258 ductal carcinoma, cell line, Pancreas .f 1102 to 1980 1 to 882       880/891
(98 %)
14 diff
(98.5 %id)
BM561216 duodenal adenocarcinoma, cell line, small intestine .f 1124 to 2123 1 to 1000       1000/1002
(99 %)
18 diff
(98.3 %id)
AL534724 brain, fetal brain .f 1128 to 2262 1125 to 1       1125/1125
(100 %)
12 diff
(99.0 %id)
TI_1948081860   .f 1205 to 2133 1053 to 125       929/1092
(85 %)
21 diff
(98.1 %id)
TI_1948154441   .f 1210 to 2133 1053 to 128       926/1181
(78 %)
18 diff
(98.5 %id)
BX353887 Neuroblastoma Cot 25-normalized .f 1220 to 2246 1017 to 1       1017/1017
(100 %)
17 diff
(98.4 %id)
TI_1948082075   .f 1221 to 2133 1034 to 129       906/1080
(83 %)
23 diff
(97.9 %id)
BX385918 Placenta Cot 25-normalized .f 1222 to 2242 1018 to 4       1015/1018
(99 %)
12 diff
(98.9 %id)
TI_1948081637   .f 1225 to 2133 1018 to 123       898/1068
(84 %)
37 diff
(96.6 %id)
BX426557 T cells (Jurkat cell line) .f 1241 to 2273 1027 to 1       1027/1027
(100 %)
16 diff
(98.5 %id)
AL561798 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .f 1253 to 2250 988 to 1       988/1008
(98 %)
20 diff
(98.1 %id)
TI_1948154757   .f 1254 to 2133 1008 to 126       883/1240
(71 %)
15 diff
(98.8 %id)
CR599110 Placenta Cot 25-normalized .f 1270 to 2275 1 to 1006       1006/1006
(100 %)
0 diff
(100 %id)
BI869549 adenocarcinoma, cell line, Liver .f 1284 to 2078 1 to 796       796/796
(100 %)
1 diff
(99.9 %id)
TI_57228597   .f 1284 to 2078 48 to 843       796/796
(100 %)
1 diff
(99.9 %id)
BX381701 Placenta Cot 25-normalized .f 1294 to 2268 20 to 988   fully sequenced,   969/988
(98 %)
15 diff
(98.5 %id)
AA324865 brain, cerebellum .f 1320 to 1623 1 to 304       304/304
(100 %)
0 diff
(100 %id)
AL523621 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .f 1323 to 2249 927 to 7       921/968
(95 %)
12 diff
(98.8 %id)
TI_1948082282   .f 1327 to 2133 933 to 122       812/1104
(73 %)
9 diff
(99.2 %id)
BX337916 Placenta Cot 25-normalized .f 1339 to 2245 914 to 1       837/926
(90 %)
42 diff
(95.5 %id)
TI_149300673   .f 1342 to 2274 993 to 73   AAA   921/994
(92 %)
14 diff
(98.6 %id)
BX461063 brain, fetal brain .f 1387 to 2240 861 to 9       853/861
(99 %)
9 diff
(99.0 %id)
BX352358   .f 1387 to 2271 887 to 1       887/888
(99 %)
7 diff
(99.3 %id)
BE535904 cervix .f 1392 to 2182 1 to 788       788/869
(90 %)
24 diff
(97.3 %id)
TI_57228115   .f 1399 to 2119 49 to 769       721/721
(100 %)
2 diff
(99.8 %id)
BG472354 eye, retinoblastoma .f 1400 to 2226 1 to 832       832/836
(99 %)
16 diff
(98.1 %id)
BI868454 adenocarcinoma, cell line, Liver .f 1400 to 2119 1 to 720       720/720
(100 %)
2 diff
(99.8 %id)
BX455374 brain, fetal brain .f 1406 to 2280 878 to 1       878/878
(100 %)
11 diff
(98.8 %id)
BX098654 senescent fibroblast .f 1421 to 2123 1 to 703       703/711
(98 %)
1 diff
(99.9 %id)
TI_149314144   .f 1436 to 2274 915 to 84   AAA   832/959
(86 %)
15 diff
(98.5 %id)
BX380106 Placenta Cot 25-normalized .f 1477 to 2269 791 to 1       791/791
(100 %)
9 diff
(98.9 %id)
BU535465 adenocarcinoma, cell line, breast .f 1481 to 2268 1 to 800       800/928
(86 %)
18 diff
(98.1 %id)
CA455417 adenocarcinoma, cell line, breast .f 1481 to 2131 1 to 651       651/750
(86 %)
2 diff
(99.8 %id)
CB270051 adipose .f 1500 to 1987 1 to 488       488/488
(100 %)
0 diff
(100 %id)
EC575623 Prostate .f 1512 to 1610 1 to 99       99/99
(100 %)
0 diff
(100 %id)
TI_159720076   .f 1521 to 2274 861 to 108   AAA   754/1011
(74 %)
2 diff
(99.9 %id)
BM976694 lung, Primary Lung Cystic Fibrosis EpithelialCells .f 1565 to 2274 728 to 19   AAA   710/710
(100 %)
0 diff
(100 %id)
CB321660 lung, Primary Lung Cystic Fibrosis EpithelialCells .f 1567 to 2274 726 to 19   AAA   708/708
(100 %)
0 diff
(100 %id)
BU617143 Bone, Subchondral Bone .f 1613 to 2274 680 to 19   AAA   662/662
(100 %)
0 diff
(100 %id)
BM996995 Chondrosarcoma, Left Pubic Bone .f 1618 to 2281 682 to 19   AAA   664/664
(100 %)
0 diff
(100 %id)
BM696305 eye, lens .f 1637 to 2006 1 to 370   fully sequenced,   370/370
(100 %)
0 diff
(100 %id)
CB852868 Human Lung Epithelial cells, lung .f 1648 to 2274 645 to 19   AAA   627/627
(100 %)
0 diff
(100 %id)
AA403210   .f 1670 to 2011 1 to 342       342/342
(100 %)
0 diff
(100 %id)
BX381700 Placenta Cot 25-normalized .f 1701 to 2252 550 to 1   fully sequenced,   550/550
(100 %)
6 diff
(99.0 %id)
AA861295   .f 1742 to 2233 492 to 1       492/492
(100 %)
0 diff
(100 %id)
BM707136 eye, eye anterior segment .f 1750 to 2274 1 to 525   fully sequenced, AAA   525/525
(100 %)
4 diff
(99.3 %id)
AW249478 lung, small cell carcinoma .f 1775 to 2274 510 to 11   AAA   500/500
(100 %)
0 diff
(100 %id)
DB577780 hypothalamus .f 1803 to 2283 1 to 481     Submitted on the opposite strand 481/481
(100 %)
0 diff
(100 %id)
AW103932 ovary, tumor, 5 pooled (see description) .f 1824 to 2283 460 to 1       460/460
(100 %)
0 diff
(100 %id)
DB553881 hypothalamus .f 1833 to 2283 1 to 451     Submitted on the opposite strand 451/451
(100 %)
0 diff
(100 %id)
BQ279103 adenocarcinoma, cell line, breast .f 1855 to 2274 1 to 420   AAA   420/420
(100 %)
0 diff
(100 %id)
AW304290 lung, two pooled squamous cell carcinomas .f 1865 to 2276 438 to 27   AAA   412/412
(100 %)
0 diff
(100 %id)
AW304220 brain, three pooled meningiomas .f 1871 to 2278 408 to 1       408/408
(100 %)
0 diff
(100 %id)
BM673174 eye, eye anterior segment .f 1872 to 2274 421 to 19   fully sequenced, AAA   403/403
(100 %)
1 diff
(99.8 %id)
AI042046 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f 1877 to 2280 404 to 1       404/404
(100 %)
0 diff
(100 %id)
AI589147 brain, glioblastoma (pooled) .f 1878 to 2276 399 to 1       399/399
(100 %)
0 diff
(100 %id)
AA424509 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f 1910 to 2275 371 to 6       366/371
(98 %)
0 diff
(100 %id)
CN262349 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .f 1921 to 2276 1 to 356   AAA   356/356
(100 %)
0 diff
(100 %id)
BF916722 uterus_tumor .f 1928 to 2027 100 to 1     Submitted on the opposite strand 100/100
(100 %)
0 diff
(100 %id)
AI362276 brain, glioblastoma (pooled) .f 1933 to 2274 342 to 1       342/342
(100 %)
0 diff
(100 %id)
BU735351 eye, lens .f 1945 to 2274 348 to 19   fully sequenced, AAA   330/330
(100 %)
0 diff
(100 %id)
F36426 pectoral muscle (after mastectomy) .f 1976 to 2039 1 to 64       64/64
(100 %)
0 diff
(100 %id)
BM468494 leiomyosarcoma, uterus .f 1984 to 2274 1 to 291   AAA   291/291
(100 %)
0 diff
(100 %id)
AA706504   .f 2021 to 2276 256 to 1     Submitted on the opposite strand 256/256
(100 %)
0 diff
(100 %id)
CN262350 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .f 2049 to 2274 1 to 226   AAA   226/226
(100 %)
0 diff
(100 %id)
AA954327 pooled .f 2049 to 2280 232 to 1       232/232
(100 %)
0 diff
(100 %id)
AA363766 pineal body .f 2084 to 2280 1 to 197       197/197
(100 %)
0 diff
(100 %id)
AA954325 pooled .f 2096 to 2280 185 to 1       185/185
(100 %)
0 diff
(100 %id)
BF718415 epidermis, skin .f 2116 to 2274 159 to 1       159/159
(100 %)
0 diff
(100 %id)
DV461244 cochlea, ear .f 2152 to 2278 146 to 20   AAA Submitted on the opposite strand 127/127
(100 %)
0 diff
(100 %id)
BE541298 cervix .f 2160 to 2271 1 to 112       112/112
(100 %)
0 diff
(100 %id)
EC498248 Prostate .f 2166 to 2271 1 to 106       106/106
(100 %)
0 diff
(100 %id)
BX382162 Placenta Cot 25-normalized .g 1 to 970 1 to 968   tiling clone,   968/972
(99 %)
4 diff
(99.6 %id)
BX382161 Placenta Cot 25-normalized .g 1080 to 2101 1012 to 1   tiling clone,   1012/1016
(99 %)
12 diff
(98.9 %id)
BX333622 Neuroblastoma Cot 25-normalized .h 1 to 920 2 to 914   tiling clone,   916/993
(92 %)
12 diff
(98.8 %id)
BX333621 Neuroblastoma Cot 25-normalized .h 1020 to 2018 993 to 1   tiling clone,   993/993
(100 %)
19 diff
(98.1 %id)
W17303 lung .i 1 to 460 1 to 459   tiling clone,   459/463
(99 %)
4 diff
(99.2 %id)
N78868 lung .i 1453 to 1904 452 to 1   tiling clone,   452/458
(98 %)
4 diff
(99.2 %id)
CN262339 embryonic stem cells, DMSO-treated H9 cellline .j 1 to 481 6 to 486       486/486
(100 %)
0 diff
(100 %id)
CN262342 embryonic stem cells, cell lines H1, H7, andH9 .j 1 to 596 3 to 598   tiling clone,   598/598
(100 %)
0 diff
(100 %id)
BP355176   .j 1 to 573 2 to 574       574/582
(98 %)
0 diff
(100 %id)
W88464 liver and spleen .j 7 to 275 1 to 273   fully sequenced,   273/273
(100 %)
6 diff
(97.9 %id)
AA282387 germinal center B cell .j 19 to 546 1 to 525       525/525
(100 %)
5 diff
(99.1 %id)
DA046000 bladder .j 26 to 604 2 to 581   capped   580/580
(100 %)
1 diff
(99.9 %id)
CX866816 embryonic stem .j 29 to 888 1 to 860       860/860
(100 %)
3 diff
(99.7 %id)
BE700979 nervous_normal .j 188 to 558 18 to 389       372/389
(95 %)
10 diff
(97.5 %id)
BE502797 carcinoid, lung .j 198 to 606 409 to 1       409/409
(100 %)
0 diff
(100 %id)
W90424 liver and spleen .j 214 to 604 392 to 2   fully sequenced,   391/392
(99 %)
0 diff
(100 %id)
AI128704 heart .j 236 to 603 367 to 1       367/367
(100 %)
1 diff
(99.8 %id)
AA722509 pineal gland .j 240 to 583 1 to 344     Submitted on the opposite strand 344/344
(100 %)
0 diff
(100 %id)
AA010581 heart .j 244 to 603 361 to 1       361/366
(98 %)
4 diff
(99.0 %id)
BQ365571 placenta_normal .j 245 to 517 275 to 5       271/284
(95 %)
1 diff
(99.7 %id)
BM826370 Ascites, stomach .j 295 to 827 10 to 542   tiling clone,   533/542
(98 %)
6 diff
(98.9 %id)
AI912924 Kidney .j 309 to 603 295 to 1       295/295
(100 %)
0 diff
(100 %id)
AW391896 stomach .j 342 to 463 214 to 93       122/214
(57 %)
4 diff
(98.2 %id)
AF130092 Liver .j 636 to 2514 1 to 1879   tiling clone, AAA   1879/1879
(100 %)
0 diff
(100 %id)
BM794700 Ascites, stomach .j 1429 to 2099 1 to 670       670/670
(100 %)
2 diff
(99.8 %id)
DA054466 cerebellum .k 1 to 564 2 to 565   tiling clone, capped   564/564
(100 %)
0 diff
(100 %id)
CR598025 fetal brain .k 36 to 1738 1 to 1703 exact     1703/1703
(100 %)
0 diff
(100 %id)
CR601978 fetal brain .k 51 to 1727 1 to 1677 exact     1677/1677
(100 %)
0 diff
(100 %id)
NM_006086.2   .k 58 to 1768 1 to 1711 exact RefSeq, AAA   1711/1711
(100 %)
0 diff
(100 %id)
AK314616   .k 61 to 1475 1 to 1415 V49A     1415/1415
(100 %)
5 diff
(99.7 %id)
DA907702   .k 64 to 837 2 to 780   capped   779/781
(99 %)
13 diff
(98.4 %id)
AK223039 thyroid .k 66 to 1768 1 to 1703 Y340C tiling clone, AAA   1703/1703
(100 %)
2 diff
(99.9 %id)
TI_45209120   .k 66 to 976 91 to 1000       910/1077
(84 %)
48 diff
(95.6 %id)
TI_45211514   .k 66 to 937 89 to 961       873/1008
(86 %)
28 diff
(97.3 %id)
TI_44349487   .k 66 to 935 90 to 958       869/958
(90 %)
21 diff
(97.9 %id)
TI_44344434   .k 66 to 925 130 to 986       857/1040
(82 %)
21 diff
(98.0 %id)
CR591503 fetal brain .k 69 to 1733 1 to 1665 exact     1665/1665
(100 %)
0 diff
(100 %id)
DB506305 hypothalamus .k 69 to 543 1 to 475       475/475
(100 %)
0 diff
(100 %id)
CR590075 fetal brain .k 70 to 1729 1 to 1659 Q94K S95V A97P G98A N99T ...     1659/1659
(100 %)
2 diff
(99.9 %id)
CR592610 B cells (Ramos cell line) .k 71 to 1745 1 to 1675 exact     1675/1675
(100 %)
0 diff
(100 %id)
CR595964 neuroblastoma .k 71 to 1745 1 to 1675 exact     1675/1675
(100 %)
0 diff
(100 %id)
CR598043 fetal brain .k 71 to 1729 1 to 1659 exact     1659/1659
(100 %)
0 diff
(100 %id)
CR600906 fetal brain .k 71 to 1734 1 to 1664 exact     1664/1664
(100 %)
0 diff
(100 %id)
CR614385 fetal brain .k 71 to 1743 1 to 1673 exact     1673/1673
(100 %)
0 diff
(100 %id)
BQ716316 sympathetic trunk .k 72 to 1033 1 to 964       964/973
(99 %)
33 diff
(96.7 %id)
BC000748 Lung, small cell carcinoma .k 74 to 1768 1 to 1695 exact tiling clone, available from MGC, AAA   1695/1695
(100 %)
0 diff
(100 %id)
CR590351 fetal brain .k 74 to 1733 1 to 1660 exact     1660/1660
(100 %)
0 diff
(100 %id)
CR592791 fetal brain .k 74 to 1761 1 to 1688 exact     1688/1688
(100 %)
0 diff
(100 %id)
CR597505 fetal brain .k 74 to 1735 1 to 1662 exact     1662/1662
(100 %)
0 diff
(100 %id)
CR599272 fetal brain .k 74 to 1741 1 to 1668 exact     1668/1668
(100 %)
0 diff
(100 %id)
CR604020 fetal brain .k 74 to 1679 1 to 1606 exact     1606/1606
(100 %)
0 diff
(100 %id)
CR604723 fetal brain .k 74 to 1727 1 to 1654 exact     1654/1654
(100 %)
0 diff
(100 %id)
CR605372 fetal brain .k 74 to 1745 1 to 1672 exact     1672/1672
(100 %)
0 diff
(100 %id)
CR607915 fetal brain .k 74 to 1730 1 to 1657 exact     1657/1657
(100 %)
0 diff
(100 %id)
CR611692 fetal brain .k 74 to 1626 1 to 1553 exact     1553/1553
(100 %)
0 diff
(100 %id)
CR612113 fetal brain .k 74 to 1744 1 to 1671 exact     1671/1671
(100 %)
0 diff
(100 %id)
CR618719 fetal brain .k 74 to 1735 1 to 1662 exact     1662/1662
(100 %)
0 diff
(100 %id)
CR619366 fetal brain .k 74 to 1761 1 to 1688 exact     1688/1688
(100 %)
0 diff
(100 %id)
CR619439 B cells (Ramos cell line) .k 74 to 1707 1 to 1634 exact     1634/1634
(100 %)
0 diff
(100 %id)
CR621602 fetal brain .k 74 to 1751 1 to 1678 exact     1678/1678
(100 %)
0 diff
(100 %id)
AL537336 brain, fetal brain .k 74 to 949 1 to 876       876/876
(100 %)
2 diff
(99.8 %id)
BX464037 brain, fetal brain .k 74 to 1162 1 to 1071       1071/1078
(99 %)
23 diff
(97.9 %id)
AW245925 lung, small cell carcinoma .k 74 to 606 10 to 542       533/542
(98 %)
6 diff
(98.9 %id)
BQ721673 sympathetic trunk .k 74 to 957 1 to 895       895/939
(95 %)
19 diff
(98.0 %id)
CR592245 fetal brain .k 75 to 1761 1 to 1687 exact     1687/1687
(100 %)
0 diff
(100 %id)
CR594431 fetal brain .k 75 to 1735 1 to 1661 exact     1661/1661
(100 %)
0 diff
(100 %id)
CR601082 fetal brain .k 75 to 1680 1 to 1606 exact     1606/1606
(100 %)
0 diff
(100 %id)
CR601754 fetal brain .k 75 to 1680 1 to 1606 exact     1606/1606
(100 %)
0 diff
(100 %id)
CR605618 fetal brain .k 75 to 1745 1 to 1671 exact     1671/1671
(100 %)
0 diff
(100 %id)
CR607807 fetal brain .k 75 to 1735 1 to 1661 exact     1661/1661
(100 %)
0 diff
(100 %id)
CR613956 B cells (Ramos cell line) .k 75 to 1761 1 to 1687 exact     1687/1687
(100 %)
0 diff
(100 %id)
CR614638 neuroblastoma .k 75 to 1631 1 to 1557 exact     1557/1557
(100 %)
0 diff
(100 %id)
CR615850 T cells (Jurkat cell line) Cot10-normalized .k 75 to 1731 1 to 1657 exact     1657/1657
(100 %)
0 diff
(100 %id)
CR617597 fetal brain .k 75 to 1767 1 to 1693 exact     1693/1693
(100 %)
0 diff
(100 %id)
CR618148 fetal brain .k 75 to 1726 1 to 1652 exact     1652/1652
(100 %)
0 diff
(100 %id)
CR620404 fetal brain .k 75 to 1747 1 to 1673 exact     1673/1673
(100 %)
0 diff
(100 %id)
CR622595 adult brain .k 75 to 1702 1 to 1628 exact     1628/1628
(100 %)
0 diff
(100 %id)
CR622839 fetal brain .k 75 to 1695 1 to 1621 exact     1621/1621
(100 %)
0 diff
(100 %id)
CR625315 fetal brain .k 75 to 1747 1 to 1673 exact     1673/1673
(100 %)
0 diff
(100 %id)
BX418981 brain, fetal brain .k 75 to 1040 1 to 961       961/996
(96 %)
11 diff
(98.9 %id)
BM808488 amelanotic melanoma, cell line, skin .k 75 to 1082 1 to 1026       1026/1027
(99 %)
28 diff
(97.3 %id)
BM474115 leiomyosarcoma, uterus .k 75 to 972 1 to 905       905/947
(95 %)
15 diff
(98.5 %id)
BM557821 duodenal adenocarcinoma, cell line, small intestine .k 75 to 972 1 to 909       909/1006
(90 %)
17 diff
(98.4 %id)
CR595448 fetal brain .k 76 to 1745 1 to 1670 exact     1670/1670
(100 %)
0 diff
(100 %id)
CR609285 fetal brain .k 76 to 1735 1 to 1660 exact     1660/1660
(100 %)
0 diff
(100 %id)
CR623719 B cells (Ramos cell line) .k 76 to 1750 1 to 1675 exact     1675/1675
(100 %)
0 diff
(100 %id)
BX459842.
matches multiple genes
brain, fetal brain .k 76 to 1197 1 to 1120     also hits gene C8orf82andLRRC24 1120/1128
(99 %)
18 diff
(98.5 %id)
BI870630 adenocarcinoma, cell line, Liver .k 76 to 956 1 to 876       876/878
(99 %)
15 diff
(98.3 %id)
BU187798 eye, retinoblastoma .k 76 to 952 1 to 892       892/897
(99 %)
20 diff
(97.8 %id)
TI_57230091   .k 76 to 956 64 to 939       876/878
(99 %)
15 diff
(98.3 %id)
CR594636 fetal brain .k 77 to 1761 1 to 1685 exact     1685/1685
(100 %)
0 diff
(100 %id)
CR603943 fetal brain .k 77 to 1732 1 to 1656 exact     1656/1656
(100 %)
0 diff
(100 %id)
CR604865 fetal brain .k 77 to 1752 1 to 1676 exact     1676/1676
(100 %)
0 diff
(100 %id)
CR605315 fetal brain .k 77 to 1588 1 to 1512 exact     1512/1512
(100 %)
0 diff
(100 %id)
CR608519 fetal brain .k 77 to 1756 1 to 1680 exact     1680/1680
(100 %)
0 diff
(100 %id)
CR609873 fetal brain .k 77 to 1733 1 to 1657 exact     1657/1657
(100 %)
0 diff
(100 %id)
CR609931 fetal brain .k 77 to 1767 1 to 1691 exact     1691/1691
(100 %)
0 diff
(100 %id)
CR610428 fetal brain .k 77 to 1727 1 to 1651 exact     1651/1651
(100 %)
0 diff
(100 %id)
CR610920 fetal brain .k 77 to 1761 1 to 1685 exact     1685/1685
(100 %)
0 diff
(100 %id)
CR613333 fetal brain .k 77 to 1752 1 to 1676 exact     1676/1676
(100 %)
0 diff
(100 %id)
CR615967 fetal brain .k 77 to 1728 1 to 1652 exact     1652/1652
(100 %)
0 diff
(100 %id)
CR617704 fetal brain .k 77 to 1746 1 to 1670 exact     1670/1670
(100 %)
0 diff
(100 %id)
CR625137 fetal brain .k 77 to 1761 1 to 1685 exact     1685/1685
(100 %)
0 diff
(100 %id)
BX418946 brain, fetal brain .k 77 to 1077 1 to 999       999/1044
(95 %)
10 diff
(99.1 %id)
BX460133 brain, fetal brain .k 77 to 983 1 to 902   fully sequenced,   902/902
(100 %)
2 diff
(99.8 %id)
BX460319 brain, fetal brain .k 77 to 986 1 to 906   fully sequenced,   906/906
(100 %)
4 diff
(99.6 %id)
BX442255 brain, fetal brain .k 77 to 1077 1 to 993       993/993
(100 %)
17 diff
(98.3 %id)
BX420689 brain, fetal brain .k 77 to 1105 1 to 1025       1025/1070
(95 %)
11 diff
(99.0 %id)
CR590783 fetal brain .k 78 to 1745 1 to 1668 exact     1668/1668
(100 %)
0 diff
(100 %id)
CR596446 fetal brain .k 78 to 1735 1 to 1658 exact     1658/1658
(100 %)
0 diff
(100 %id)
CR604211 fetal brain .k 78 to 1745 1 to 1668 exact     1668/1668
(100 %)
0 diff
(100 %id)
CR604583 fetal brain .k 78 to 1712 1 to 1635 exact     1635/1635
(100 %)
0 diff
(100 %id)
CR605022 fetal brain .k 78 to 1721 1 to 1644 exact     1644/1644
(100 %)
0 diff
(100 %id)
CR613212 fetal brain .k 78 to 1731 1 to 1654 exact     1654/1654
(100 %)
0 diff
(100 %id)
CR615484 fetal brain .k 78 to 1688 1 to 1611 exact     1611/1611
(100 %)
0 diff
(100 %id)
CR615487 fetal brain .k 78 to 1745 1 to 1668 exact     1668/1668
(100 %)
0 diff
(100 %id)
CR616697 neuroblastoma .k 78 to 1761 1 to 1684 exact     1684/1684
(100 %)
0 diff
(100 %id)
CR624252 fetal brain .k 78 to 1649 1 to 1572 exact     1572/1572
(100 %)
0 diff
(100 %id)
CR624879 fetal brain .k 78 to 1734 1 to 1657 exact     1657/1657
(100 %)
0 diff
(100 %id)
CR625914 adult brain .k 78 to 1137 1 to 1060       1060/1060
(100 %)
0 diff
(100 %id)
AL533616 brain, fetal brain .k 78 to 781 1 to 695   fully sequenced,   695/695
(100 %)
0 diff
(100 %id)
BX440802 brain, fetal brain .k 78 to 1018 1 to 933       933/937
(99 %)
14 diff
(98.6 %id)
BM043186 carcinoma, cell line, Prostate .k 78 to 995 1 to 914       914/972
(94 %)
19 diff
(98.1 %id)
CR593464 fetal brain .k 79 to 1761 1 to 1683 exact     1683/1683
(100 %)
0 diff
(100 %id)
CR600381 fetal brain .k 79 to 1750 1 to 1672 exact     1672/1672
(100 %)
0 diff
(100 %id)
CR601914 fetal brain .k 79 to 1740 1 to 1662 exact     1662/1662
(100 %)
0 diff
(100 %id)
CR605928 fetal brain .k 79 to 1767 1 to 1689 exact     1689/1689
(100 %)
0 diff
(100 %id)
CR609561 B cells (Ramos cell line) .k 79 to 1751 1 to 1673 exact     1673/1673
(100 %)
0 diff
(100 %id)
BQ073566 epidermoid carcinoma, cell line, lung .k 79 to 984 1 to 912       912/1000
(91 %)
10 diff
(99.0 %id)
BQ070390 brain, neuroblastoma, cell line .k 79 to 972 1 to 905       905/978
(92 %)
18 diff
(98.2 %id)
BQ889321 dorsal root ganglia .k 79 to 993 1 to 928       928/971
(95 %)
21 diff
(97.9 %id)
BQ949823 epidermoid carcinoma, cell line, lung .k 79 to 946 1 to 873       873/873
(100 %)
13 diff
(98.6 %id)
CR590708 fetal brain .k 80 to 1766 1 to 1687 exact     1687/1687
(100 %)
0 diff
(100 %id)
CR598551 fetal brain .k 81 to 1582 1 to 1502 exact     1502/1502
(100 %)
0 diff
(100 %id)
CR600096 neuroblastoma .k 81 to 1768 1 to 1688 exact     1688/1688
(100 %)
0 diff
(100 %id)
CR604086 adult brain .k 81 to 1737 1 to 1657 exact     1657/1657
(100 %)
0 diff
(100 %id)
CR605687 fetal brain .k 81 to 1756 1 to 1676 exact     1676/1676
(100 %)
0 diff
(100 %id)
BX460714 brain, fetal brain .k 81 to 1041 1 to 960   fully sequenced,   960/960
(100 %)
3 diff
(99.7 %id)
BQ880448 dorsal root ganglia .k 81 to 997 1 to 922       922/934
(98 %)
29 diff
(96.9 %id)
BQ952360 sciatic nerve .k 81 to 952 1 to 886       886/927
(95 %)
28 diff
(97.0 %id)
BQ939998 eye, normal pigmented retinal epithelium .k 83 to 993 1 to 924       924/925
(99 %)
26 diff
(97.2 %id)
BQ958358 epidermoid carcinoma, cell line, lung .k 83 to 1027 1 to 951       951/951
(100 %)
14 diff
(98.6 %id)
BU848816 ovary, teratocarcinoma, cell line .k 83 to 952 1 to 879       879/936
(93 %)
12 diff
(98.8 %id)
CR611346 fetal brain .k 85 to 1745 1 to 1661 exact     1661/1661
(100 %)
0 diff
(100 %id)
CR614854 fetal brain .k 85 to 1680 1 to 1596 exact     1596/1596
(100 %)
0 diff
(100 %id)
CR615754 fetal brain .k 85 to 1761 1 to 1677 exact     1677/1677
(100 %)
0 diff
(100 %id)
CR623384 fetal brain .k 85 to 1748 1 to 1664 exact     1664/1664
(100 %)
0 diff
(100 %id)
AL534982 brain, fetal brain .k 85 to 1004 1 to 915   fully sequenced,   915/915
(100 %)
2 diff
(99.8 %id)
BX440873 brain, fetal brain .k 85 to 1051 1 to 960       960/960
(100 %)
13 diff
(98.7 %id)
CR594063 fetal brain .k 86 to 1739 1 to 1654 exact     1654/1654
(100 %)
0 diff
(100 %id)
CR596211 fetal brain .k 86 to 1745 1 to 1660 exact     1660/1660
(100 %)
0 diff
(100 %id)
CR596786 fetal brain .k 86 to 1736 1 to 1651 exact     1651/1651
(100 %)
0 diff
(100 %id)
CR599992 neuroblastoma .k 86 to 1743 1 to 1658 exact     1658/1658
(100 %)
0 diff
(100 %id)
CR603504 fetal brain .k 86 to 1729 1 to 1644 exact     1644/1644
(100 %)
0 diff
(100 %id)
CR603509 fetal brain .k 86 to 1746 1 to 1661 exact     1661/1661
(100 %)
0 diff
(100 %id)
CR603741 adult brain .k 86 to 1746 1 to 1661 exact     1661/1661
(100 %)
0 diff
(100 %id)
CR614150 fetal brain .k 86 to 1746 1 to 1661 exact     1661/1661
(100 %)
0 diff
(100 %id)
CR623445 fetal brain .k 86 to 1761 1 to 1676 exact     1676/1676
(100 %)
0 diff
(100 %id)
BX440359 brain, fetal brain .k 86 to 1023 1 to 919   fully sequenced,   919/919
(100 %)
8 diff
(99.2 %id)
BX461072 brain, fetal brain .k 86 to 1018 1 to 929       929/977
(95 %)
19 diff
(98.1 %id)
BX461584 brain, fetal brain .k 86 to 1098 1 to 1006       1006/1009
(99 %)
18 diff
(98.3 %id)
BQ073579 epidermoid carcinoma, cell line, lung .k 87 to 972 1 to 890       890/996
(89 %)
7 diff
(99.3 %id)
CR592535 fetal brain .k 88 to 1722 1 to 1635 exact     1635/1635
(100 %)
0 diff
(100 %id)
CR609278 fetal brain .k 88 to 1745 1 to 1658 exact     1658/1658
(100 %)
0 diff
(100 %id)
CR610945 neuroblastoma .k 88 to 1745 1 to 1658 exact     1658/1658
(100 %)
0 diff
(100 %id)
CR623379 fetal brain .k 88 to 1761 1 to 1674 exact     1674/1674
(100 %)
0 diff
(100 %id)
BX461480 brain, fetal brain .k 88 to 1100 1 to 1005       1005/1005
(100 %)
20 diff
(98.1 %id)
BQ679172 melanotic melanoma, cell line, skin .k 88 to 1004 1 to 925       925/927
(99 %)
14 diff
(98.5 %id)
BQ880565 dorsal root ganglia .k 89 to 980 1 to 900       900/900
(100 %)
10 diff
(98.9 %id)
CR609372 fetal brain .k 94 to 1747 1 to 1654 exact     1654/1654
(100 %)
0 diff
(100 %id)
BX460893 brain, fetal brain .k 94 to 1140 1 to 1039       1039/1051
(98 %)
15 diff
(98.6 %id)
BX419962 brain, fetal brain .k 94 to 1077 1 to 967       967/980
(98 %)
26 diff
(97.4 %id)
BQ953481 epidermoid carcinoma, cell line, lung .k 94 to 994 1 to 909       909/909
(100 %)
17 diff
(98.2 %id)
CR622759 fetal brain .k 96 to 1732 1 to 1637 exact     1637/1637
(100 %)
0 diff
(100 %id)
BX460810 brain, fetal brain .k 96 to 985 1 to 890       890/890
(100 %)
2 diff
(99.8 %id)
BQ717567 sympathetic trunk .k 99 to 993 1 to 906       906/911
(99 %)
21 diff
(97.7 %id)
CR624149 fetal brain .k 100 to 1728 1 to 1629 exact     1629/1629
(100 %)
0 diff
(100 %id)
CR593269 fetal brain .k 101 to 1760 1 to 1660 exact     1660/1660
(100 %)
0 diff
(100 %id)
CR600094 Placenta Cot 25-normalized .k 103 to 1734 1 to 1632 exact     1632/1632
(100 %)
0 diff
(100 %id)
CR612703 fetal brain .k 107 to 1746 1 to 1640 exact     1640/1640
(100 %)
0 diff
(100 %id)
AF427491 breast cancer .k 123 to 1475 1 to 1353 exact     1353/1353
(100 %)
1 diff
(100.0 %id)
BJ995371 hepatoblastoma .k 123 to 722 1 to 600       600/600
(100 %)
0 diff
(100 %id)
TI_1948094495   .k 123 to 1102 131 to 1118       988/1349
(73 %)
47 diff
(96.6 %id)
U47634   .k 123 to 1768 1 to 1648 A275R     1648/1648
(100 %)
12 diff
(99.3 %id)
BQ925781 epidermoid carcinoma, cell line, lung .k 128 to 993 1 to 870       870/952
(91 %)
12 diff
(98.8 %id)
BQ420332 epithelioid carcinoma, Pancreas .k 135 to 1016 1 to 886       886/886
(100 %)
6 diff
(99.4 %id)
BQ722576 sympathetic trunk .k 135 to 993 1 to 879       879/886
(99 %)
30 diff
(96.7 %id)
S62643   .k 144 to 443 1 to 300       300/300
(100 %)
0 diff
(100 %id)
CR603177 fetal brain .k 178 to 1767 1 to 1590       1590/1590
(100 %)
0 diff
(100 %id)
CR618463 fetal brain .k 178 to 1756 1 to 1579       1579/1579
(100 %)
0 diff
(100 %id)
CX868211 embryonic stem .k 272 to 953 1 to 682       682/682
(100 %)
0 diff
(100 %id)
AU118443 whole embryo, mainly head .k 396 to 1116 2 to 724   capped   723/723
(100 %)
6 diff
(99.2 %id)
BQ646438 hepatocellular carcinoma, cell line, Liver .k 399 to 1268 28 to 915       888/971
(91 %)
36 diff
(96.3 %id)
BQ648008 hepatocellular carcinoma, cell line, Liver .k 399 to 1341 12 to 963       952/964
(98 %)
36 diff
(96.3 %id)
BU539223 adenocarcinoma, cell line, breast .k 399 to 1295 38 to 941       904/946
(95 %)
14 diff
(98.6 %id)
TI_154163088   .k 408 to 952 80 to 640       561/764
(73 %)
22 diff
(97.2 %id)
TI_59385948   .k 410 to 1176 42 to 806       765/806
(94 %)
6 diff
(99.3 %id)
BM048567 carcinoma, cell line, Prostate .k 414 to 1291 1 to 877       877/877
(100 %)
18 diff
(98.0 %id)
BM046601 carcinoma, cell line, Prostate .k 414 to 1357 1 to 955       955/1022
(93 %)
32 diff
(96.9 %id)
CR594464 fetal brain .k 416 to 1724 1 to 1309       1309/1309
(100 %)
0 diff
(100 %id)
AL540317 brain, fetal brain .k 416 to 1072 1 to 646   fully sequenced,   646/646
(100 %)
2 diff
(99.7 %id)
BQ944928 carcinoma, cell line, Prostate .k 416 to 1332 1 to 930       930/937
(99 %)
21 diff
(97.8 %id)
TI_154189984   .k 421 to 1391 56 to 1020       965/1034
(93 %)
17 diff
(98.4 %id)
CB121519 Liver .k 513 to 1042 1 to 530       530/530
(100 %)
5 diff
(99.1 %id)
BQ945519 carcinoma, cell line, Prostate .k 533 to 1495 1 to 964       964/971
(99 %)
28 diff
(97.2 %id)
BQ926969 brain, neuroblastoma, cell line .k 619 to 1556 1 to 938       938/938
(100 %)
14 diff
(98.6 %id)
CR592025 Placenta Cot 25-normalized .k 633 to 1762 1 to 1130       1130/1130
(100 %)
0 diff
(100 %id)
BU197283 epidermoid carcinoma, cell line, salivary gland .k 637 to 1618 1 to 987       987/991
(99 %)
33 diff
(96.7 %id)
BX464036 brain, fetal brain .k 661 to 1734 1077 to 17       1061/1100
(96 %)
0 diff
(100 %id)
BQ073765 epidermoid carcinoma, cell line, lung .k 661 to 1542 1 to 889       889/989
(89 %)
16 diff
(98.4 %id)
TI_59389185   .k 701 to 1450 98 to 848       751/751
(100 %)
1 diff
(99.9 %id)
BU956682 adenocarcinoma, cell line, breast .k 736 to 1595 1 to 876       876/907
(96 %)
27 diff
(97.1 %id)
BQ278670 adenocarcinoma, cell line, breast .k 746 to 1634 1 to 901   AAA   901/1080
(83 %)
17 diff
(98.5 %id)
AL533615 brain, fetal brain .k 751 to 1735 969 to 1   fully sequenced,   969/969
(100 %)
11 diff
(98.9 %id)
BQ646737 hepatocellular carcinoma, cell line, Liver .k 761 to 1643 1 to 892       892/948
(94 %)
42 diff
(95.6 %id)
CR626587 fetal brain .k 774 to 1717 1 to 944       944/944
(100 %)
0 diff
(100 %id)
AL533580.
matches multiple genes
brain, fetal brain .k 790 to 1427 669 to 33     also hits gene TUBB2B 637/749
(85 %)
0 diff
(100 %id)
CR616091 fetal brain .k 803 to 1767 1 to 965       965/965
(100 %)
0 diff
(100 %id)
AL566769 brain, fetal brain .k 813 to 1741 921 to 1       921/925
(99 %)
23 diff
(97.6 %id)
BG762502 melanotic melanoma, high MDR (cell line), skin .k 821 to 1698 1 to 880       880/911
(96 %)
16 diff
(98.3 %id)
BQ919620 large cell carcinoma, lung .k 852 to 1769 1 to 923   AAA   923/923
(100 %)
12 diff
(98.7 %id)
BU538781 adenocarcinoma, cell line, breast .k 858 to 1744 1 to 888       888/888
(100 %)
5 diff
(99.5 %id)
BQ882286 brain, neuroblastoma, cell line .k 877 to 1762 1 to 891       891/897
(99 %)
24 diff
(97.4 %id)
TI_154052431   .k 918 to 1765 917 to 78   AAA   840/963
(87 %)
17 diff
(98.3 %id)
CR625316 fetal brain .k 925 to 1741 1 to 817       817/817
(100 %)
0 diff
(100 %id)
BX463794 brain, fetal brain .k 925 to 1768 1 to 842       842/842
(100 %)
3 diff
(99.7 %id)
AL534875 brain, fetal brain .k 942 to 1768 1 to 827       827/827
(100 %)
3 diff
(99.7 %id)
BX434798 brain, fetal brain .k 953 to 1760 804 to 1   fully sequenced,   804/804
(100 %)
11 diff
(98.7 %id)
BX434891 brain, fetal brain .k 956 to 1760 805 to 1   fully sequenced,   805/805
(100 %)
10 diff
(98.8 %id)
AL534981 brain, fetal brain .k 974 to 1680 687 to 1   fully sequenced,   687/687
(100 %)
2 diff
(99.8 %id)
BX434577 brain, fetal brain .k 993 to 1757 782 to 3   fully sequenced,   780/782
(99 %)
15 diff
(98.1 %id)
BX413212 brain, fetal brain .k 1038 to 1756 722 to 1   fully sequenced,   722/722
(100 %)
13 diff
(98.2 %id)
AL568334 brain, fetal brain .k 1042 to 1724 676 to 1   fully sequenced,   676/676
(100 %)
4 diff
(99.5 %id)
BJ995372 hepatoblastoma .k 1094 to 1693 600 to 1       600/600
(100 %)
7 diff
(98.9 %id)
AL535605.
matches multiple genes
brain, fetal brain .k 1116 to 1427 344 to 33     also hits gene TUBB2B 636/731
(87 %)
36 diff
(95.1 %id)
AW021577 cochlea, ear .k 1232 to 1744 1 to 513   fully sequenced,   513/513
(100 %)
6 diff
(98.9 %id)
CR616005 B cells (Ramos cell line) .k 1247 to 1766 1 to 520       520/520
(100 %)
0 diff
(100 %id)
CX868123 embryonic stem .k 1269 to 1768 526 to 27   AAA   500/500
(100 %)
0 diff
(100 %id)
BI492533 cochlea, ear .k 1286 to 1749 464 to 1   fully sequenced,   464/464
(100 %)
2 diff
(99.6 %id)
AW245673 lung, small cell carcinoma .k 1329 to 1768 450 to 11   AAA   440/440
(100 %)
0 diff
(100 %id)
DB331216   .k 1338 to 1762 424 to 1       424/429
(98 %)
3 diff
(99.4 %id)
TI_57199914   .k 1388 to 1768 25 to 404   AAA   380/939
(40 %)
9 diff
(99.1 %id)
CR620633 neuroblastoma .l 1 to 1460 1 to 1460 exact tiling clone,   1460/1460
(100 %)
0 diff
(100 %id)
DA056346 cerebellum .m 1 to 543 2 to 544   tiling clone, capped   543/543
(100 %)
0 diff
(100 %id)
CR596505 fetal brain .m 14 to 1868 1 to 1855 exact tiling clone,   1855/1855
(100 %)
0 diff
(100 %id)
AL539183 brain, fetal brain .m 14 to 950 1 to 927   fully sequenced,   927/927
(100 %)
5 diff
(99.5 %id)
AL567718 brain, fetal brain .m 920 to 1868 934 to 1   fully sequenced,   934/934
(100 %)
27 diff
(97.2 %id)
DA768022 brain .n 1 to 256 2 to 249   tiling clone, capped   248/248
(100 %)
5 diff
(98.0 %id)
DA774317 brain .n 206 to 771 2 to 565   tiling clone, capped   564/564
(100 %)
1 diff
(99.9 %id)
DB064508 testis .n 250 to 817 2 to 572   capped   571/571
(100 %)
4 diff
(99.3 %id)
AK122757 brain .n 567 to 4281 1 to 3718 exact tiling clone, available from FLJ,   3718/3718
(100 %)
10 diff
(99.8 %id)
DB094374 testis .n 567 to 1125 2 to 560   tiling clone, capped   559/559
(100 %)
1 diff
(99.9 %id)
DA775903 brain .n 568 to 1136 2 to 570   capped   569/569
(100 %)
2 diff
(99.7 %id)
DA322516 hippocampus .n 845 to 1333 2 to 490   capped   489/489
(100 %)
1 diff
(99.8 %id)
BX492714   .n 1113 to 1537 1 to 424       424/424
(100 %)
1 diff
(99.8 %id)
DA811612 brain .n 1494 to 2061 2 to 572   tiling clone, capped   571/571
(100 %)
1 diff
(99.9 %id)
BI008510 kidney_tumor .n 1713 to 1987 297 to 24       274/297
(92 %)
0 diff
(100 %id)
DA806055 brain .n 1777 to 2340 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DA806069 brain .n 1777 to 2342 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA689720   .n 2365 to 2904 2 to 541   tiling clone, capped   540/540
(100 %)
0 diff
(100 %id)
DA491006 brain .n 2377 to 2879 2 to 504   capped   503/503
(100 %)
2 diff
(99.7 %id)
AA102141 Pancreas .n 2593 to 2977 1 to 398       395/401
(98 %)
15 diff
(96.3 %id)
DB325976 brain .n 3734 to 4281 549 to 1       549/549
(100 %)
4 diff
(99.3 %id)
DB325557 brain .n 4005 to 4291 288 to 1   tiling clone,   288/288
(100 %)
3 diff
(99.0 %id)
AV757964 bone marrow .o-u 1 to 421 88 to 506       419/509
(82 %)
17 diff
(96.7 %id)
AV763286 bone marrow .o-u 1 to 416 1 to 412   tiling clone,   412/416
(99 %)
16 diff
(96.2 %id)
BF807195 colon_ins .o-u 217 to 564 1 to 349   tiling clone,   349/349
(100 %)
11 diff
(96.9 %id)
BF804162 colon_ins .o-u 233 to 590 1 to 356   tiling clone,   356/356
(100 %)
10 diff
(97.2 %id)
DB133999 thymus .o-u 376 to 907 2 to 531   capped   530/530
(100 %)
2 diff
(99.7 %id)
DA054811 cerebellum .o-u 395 to 951 2 to 558   tiling clone, capped   557/557
(100 %)
1 diff
(99.9 %id)
DA400129 thalamus .o-u 642 to 1182 2 to 542   capped   541/541
(100 %)
3 diff
(99.5 %id)
AK024232   .o-u 645 to 3738 1 to 3095 exact tiling clone, available from FLJ,   3095/3095
(100 %)
4 diff
(99.9 %id)
DA037956   .o-u 645 to 1209 2 to 567   capped   566/566
(100 %)
4 diff
(99.3 %id)
DB286585 uterus .o-u 645 to 959 2 to 316   capped   315/316
(99 %)
1 diff
(99.7 %id)
NM_002386.3   .o-u 646 to 3743 1 to 3098 exact RefSeq, AAA   3098/3098
(100 %)
0 diff
(100 %id)
AU127804   .o-u 646 to 1250 2 to 609   capped   608/608
(100 %)
5 diff
(99.2 %id)
DA397028 thalamus .o-u 647 to 1245 2 to 600   capped   599/599
(100 %)
0 diff
(100 %id)
DA444471 tongue, tumor tissue .o-u 651 to 1220 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DA720579   .o-u 651 to 1215 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
BG752826 eye, normal pigmented retinal epithelium .o-u 652 to 1401 1 to 749       749/749
(100 %)
6 diff
(99.2 %id)
DA473254   .o-u 689 to 1236 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
BG912058 anaplastic oligodendroglioma with 1p/19qloss, brain .o-u 697 to 1370 1 to 675       675/675
(100 %)
9 diff
(98.7 %id)
DB155098 thymus .o-u 709 to 1293 2 to 586   capped   585/585
(100 %)
1 diff
(99.9 %id)
AW504777 lymph .o-u 867 to 1221 1 to 355       355/355
(100 %)
6 diff
(98.4 %id)
TI_154161126   .o-u 872 to 1449 78 to 650       573/683
(83 %)
14 diff
(98.0 %id)
DA770418 brain .o-u 893 to 1454 2 to 564   capped   563/563
(100 %)
3 diff
(99.5 %id)
AL602795 human skeletal muscle .o-u 1068 to 1694 1 to 628       628/628
(100 %)
4 diff
(99.4 %id)
BG423086 Kidney, renal cell adenocarcinoma .o-u 1087 to 1861 1 to 766       766/772
(99 %)
31 diff
(96.0 %id)
TI_57227935   .o-u 1336 to 2091 54 to 811       758/758
(100 %)
15 diff
(98.1 %id)
BI868280 adenocarcinoma, cell line, Liver .o-u 1337 to 2091 1 to 757       757/757
(100 %)
15 diff
(98.1 %id)
BE407292 choriocarcinoma, placenta .o-u 1378 to 1938 1 to 560       560/560
(100 %)
6 diff
(99.0 %id)
BE388038 endometrium, adenocarcinoma cell line, uterus .o-u 1380 to 2028 2 to 647       646/700
(92 %)
19 diff
(97.3 %id)
BE410897 choriocarcinoma, placenta .o-u 1380 to 2043 14 to 677   tiling clone,   664/678
(97 %)
2 diff
(99.8 %id)
BF025886 melanotic melanoma, skin .o-u 1382 to 2042 1 to 653       653/653
(100 %)
11 diff
(98.4 %id)
DA557571   .o-u 1467 to 2025 2 to 560   capped   559/559
(100 %)
2 diff
(99.7 %id)
DA849518 placenta .o-u 1476 to 2005 2 to 531   capped   530/530
(100 %)
3 diff
(99.5 %id)
BE383704 melanotic melanoma, skin .o-u 1534 to 2174 173 to 834       791/1180
(67 %)
58 diff
(95.1 %id)
CN360750 embryonic stem cells, cell lines H1, H7, andH9 .o-u 1548 to 1844 1 to 297       297/297
(100 %)
2 diff
(99.4 %id)
BU521131 leiomyosarcoma, uterus .o-u 1604 to 2435 1 to 838       838/855
(98 %)
9 diff
(99.0 %id)
DA576387   .o-u 1606 to 2168 2 to 564   capped   563/563
(100 %)
4 diff
(99.3 %id)
DA547070   .o-u 1610 to 2182 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
AK225902   .o-u 1629 to 3363 1 to 1735 C267S     1735/1735
(100 %)
2 diff
(99.9 %id)
BP204037 coronary artery .o-u 1629 to 2211 1 to 583       583/583
(100 %)
2 diff
(99.7 %id)
BP254279 Kidney .o-u 1629 to 2209 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DA384061 thalamus .o-u 1630 to 2179 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
DA477690   .o-u 1630 to 2186 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA545075   .o-u 1630 to 2191 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA551611   .o-u 1630 to 2053 2 to 425   capped   424/424
(100 %)
0 diff
(100 %id)
DA553414   .o-u 1630 to 2198 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA598956   .o-u 1630 to 2180 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
DA694958   .o-u 1630 to 2177 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DA704172   .o-u 1630 to 2121 2 to 493   capped   492/492
(100 %)
1 diff
(99.8 %id)
DA901161   .o-u 1630 to 2135 2 to 507   capped   506/506
(100 %)
0 diff
(100 %id)
DA982316 synovial membrane tissue from rheumatioidarthritis .o-u 1630 to 2071 2 to 445   capped   444/444
(100 %)
3 diff
(99.4 %id)
BP266129 thyroid .o-u 1632 to 2209 1 to 578       578/578
(100 %)
1 diff
(99.9 %id)
CB129841 Liver .o-u 1634 to 2084 1 to 451       451/451
(100 %)
6 diff
(98.7 %id)
DA547592   .o-u 1641 to 2189 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
BC007856 Skin, melanotic melanoma, high MDR. .o-u 1647 to 3743 1 to 2097 I155T available from MGC, AAA   2097/2097
(100 %)
5 diff
(99.8 %id)
BM009369 amelanotic melanoma, cell line, skin .o-u 1677 to 2093 1 to 419       419/419
(100 %)
8 diff
(98.1 %id)
TI_59384108   .o-u 1678 to 2093 60 to 477       418/418
(100 %)
7 diff
(98.4 %id)
BM718168 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .o-u 1739 to 2100 3 to 364       362/367
(98 %)
6 diff
(98.4 %id)
BC080622 Skin, melanoma, melanotic .o-u 1820 to 3734 1 to 1915 R151C available from MGC, AAA   1915/1915
(100 %)
1 diff
(100.0 %id)
X67594   .o-u 1858 to 3128 1 to 1270 R163Q     1270/1270
(100 %)
2 diff
(99.9 %id)
BG761088 melanotic melanoma, high MDR (cell line), skin .o-u 2535 to 3275 1 to 740       740/741
(99 %)
17 diff
(97.8 %id)
BU540940 epithelioid carcinoma cell line, Pancreas .o-u 2778 to 3613 32 to 878       847/939
(90 %)
15 diff
(98.5 %id)
BF983238 duodenal adenocarcinoma, cell line, small intestine .o-u 2781 to 3427 56 to 701       646/703
(91 %)
10 diff
(98.6 %id)
BG829880 epithelioid carcinoma cell line, Pancreas .o-u 2795 to 3551 1 to 757       757/757
(100 %)
5 diff
(99.4 %id)
BG477380 melanotic melanoma, skin .o-u 2868 to 3454 1 to 599       599/853
(70 %)
26 diff
(97.0 %id)
BF690027 melanotic melanoma, high MDR (cell line), skin .o-u 3032 to 3713 684 to 7       678/1001
(67 %)
0 diff
(100 %id)
BG034972 adenocarcinoma, cell line, Liver .o-u 3040 to 3744 1 to 703       703/720
(97 %)
19 diff
(97.4 %id)
CA423435 cell lines, Chondrosarcoma .o-u 3094 to 3743 670 to 19   AAA   652/652
(100 %)
2 diff
(99.7 %id)
AA431397   .o-u 3105 to 3459 1 to 355       355/355
(100 %)
6 diff
(98.4 %id)
BM712467 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .o-u 3108 to 3640 1 to 533       533/533
(100 %)
4 diff
(99.3 %id)
TI_158433136   .o-u 3132 to 3743 724 to 104   AAA   621/900
(69 %)
18 diff
(98.0 %id)
BM674146 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .o-u 3213 to 3738 544 to 19   AAA   526/529
(99 %)
2 diff
(99.7 %id)
BM715807 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .o-u 3218 to 3738 1 to 521   AAA   521/521
(100 %)
2 diff
(99.7 %id)
BM701236 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .o-u 3219 to 3578 1 to 360       360/360
(100 %)
0 diff
(100 %id)
BQ436059 epithelioid carcinoma, Pancreas .o-u 3224 to 3744 1 to 521   tiling clone, AAA   521/550
(94 %)
1 diff
(99.9 %id)
CF528726 placenta .o-u 3321 to 3743 440 to 18   AAA   423/423
(100 %)
2 diff
(99.6 %id)
AW270712 brain, three pooled meningiomas .o-u 3326 to 3744 420 to 2       419/420
(99 %)
0 diff
(100 %id)
AW272593 colon, moderately-differentiated adenocarcinoma .o-u 3340 to 3673 406 to 73       334/406
(82 %)
0 diff
(100 %id)
AI379405 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .o-u 3353 to 3752 411 to 12   tiling clone, AAA   400/400
(100 %)
2 diff
(99.5 %id)
AW450172   .o-u 3360 to 3740 396 to 16   AAA   381/381
(100 %)
0 diff
(100 %id)
AU150244   .o-u 3425 to 3738 314 to 1       314/316
(99 %)
7 diff
(97.8 %id)
AI911373 pooled .o-u 3434 to 3743 324 to 15   AAA   310/310
(100 %)
1 diff
(99.7 %id)
AA778295 heart .o-u 3477 to 3738 263 to 2       262/263
(99 %)
0 diff
(100 %id)
AA432389   .o-u 3566 to 3736 178 to 8       171/178
(96 %)
0 diff
(100 %id)
BI550833 brain, hippocampus .p 1 to 712 5 to 725   tiling clone,   725/815
(88 %)
32 diff
(96.1 %id)
TI_44172168   .p 1 to 712 93 to 813       725/903
(80 %)
36 diff
(96.1 %id)
BI041556 nervous_tumor .p 626 to 886 46 to 305   tiling clone,   260/305
(85 %)
7 diff
(97.8 %id)
BQ367486 placenta_normal .p 633 to 886 2 to 254       253/254
(99 %)
9 diff
(96.5 %id)
BF868472 lung_tumor .p 681 to 1039 377 to 19     Submitted on the opposite strand 359/377
(95 %)
0 diff
(100 %id)
BF868441 lung_tumor .p 726 to 1039 337 to 24     Submitted on the opposite strand 314/337
(93 %)
0 diff
(100 %id)
AL047463 uterus .p 731 to 1088 1 to 358   tiling clone,   358/358
(100 %)
0 diff
(100 %id)
CR614861 Placenta Cot 25-normalized .q 1 to 1949 1 to 1949 exact tiling clone,   1949/1949
(100 %)
0 diff
(100 %id)
BX395561 Placenta Cot 25-normalized .q 1 to 965 1 to 957   fully sequenced,   957/957
(100 %)
4 diff
(99.6 %id)
BQ695052 adipose .q 530 to 1054 1 to 525       525/525
(100 %)
3 diff
(99.5 %id)
DW444257 Liver .q 608 to 818 17 to 227       211/227
(92 %)
8 diff
(96.5 %id)
DW423513 Liver .q 692 to 935 17 to 258       242/291
(83 %)
7 diff
(97.6 %id)
DW423514 Liver .q 692 to 935 17 to 258       242/291
(83 %)
7 diff
(97.6 %id)
BQ477756 insulinoma, Pancreas .q 720 to 1238 7 to 525       519/525
(98 %)
7 diff
(98.7 %id)
AW750240 breast .q 782 to 1060 1 to 277       277/277
(100 %)
20 diff
(92.8 %id)
AA836891 Kidney, kidney tumor .q 799 to 1197 397 to 1       397/397
(100 %)
3 diff
(99.3 %id)
BX395560 Placenta Cot 25-normalized .q 935 to 1914 1003 to 33 D2A P3L P4V W5H V6F ... fully sequenced,   971/1003
(96 %)
7 diff
(99.4 %id)
BE905795 epithelioid carcinoma, Pancreas .r 1 to 715 1 to 707 V169G S170G D171Q V173R V174W ... tiling clone,   707/923
(76 %)
17 diff
(98.2 %id)
AK024679   .s 1 to 1726 1 to 1726 exact tiling clone, available from FLJ, AAA   1726/1726
(100 %)
7 diff
(99.6 %id)
BF887658 testis_normal .s 831 to 1034 1 to 203   tiling clone,   203/212
(95 %)
22 diff
(89.7 %id)
BQ372781 prostate_tumor .s 1277 to 1571 15 to 306       292/306
(95 %)
6 diff
(98.1 %id)
BQ373198 prostate_tumor .s 1277 to 1539 12 to 274       263/287
(91 %)
1 diff
(99.7 %id)
BQ373175 prostate_tumor .s 1280 to 1675 1 to 396       396/396
(100 %)
0 diff
(100 %id)
BQ373187 prostate_tumor .s 1280 to 1640 1 to 360       360/360
(100 %)
2 diff
(99.5 %id)
BQ373195 prostate_tumor .s 1280 to 1620 1 to 341       341/341
(100 %)
0 diff
(100 %id)
BE153829 head_neck .s 1293 to 1680 404 to 15     Submitted on the opposite strand 390/409
(95 %)
0 diff
(100 %id)
BE153682 head_neck .s 1300 to 1680 403 to 23     Submitted on the opposite strand 381/403
(94 %)
0 diff
(100 %id)
BE153773 head_neck .s 1312 to 1680 371 to 9     Submitted on the opposite strand 363/371
(97 %)
0 diff
(100 %id)
BQ351694 head_neck .s 1312 to 1551 366 to 128       239/366
(65 %)
6 diff
(98.4 %id)
BQ373199 prostate_tumor .s 1468 to 1843 381 to 6   tiling clone,   376/381
(98 %)
0 diff
(100 %id)
AW895965 nervous_normal .s 1483 to 1774 311 to 22       290/311
(93 %)
0 diff
(100 %id)
BQ372878 prostate_tumor .s 1510 to 1841 326 to 1       326/326
(100 %)
9 diff
(97.3 %id)
DA490747 brain .t 1 to 566 2 to 570 P138S A146G Q147P R148E S151F ... tiling clone, to resequence, capped   569/569
(100 %)
9 diff
(98.5 %id)
DA192432 amygdala .t 5 to 594 2 to 595 G13W N14Q Q15P I16D G17R ... capped   594/594
(100 %)
4 diff
(99.4 %id)
DA412982 thalamus .t 5 to 519 2 to 516   capped   515/515
(100 %)
1 diff
(99.9 %id)
DA511651 brain .t 5 to 456 2 to 456   capped   455/455
(100 %)
5 diff
(99.0 %id)
DA793095 brain .t 5 to 616 2 to 614 V37X D39R S40L D41G Q43A ... capped   613/613
(100 %)
2 diff
(99.7 %id)
DA795908 brain .t 5 to 548 2 to 546   capped   545/545
(100 %)
2 diff
(99.7 %id)
BX460800 brain, fetal brain .t 120 to 1030 1 to 911   tiling clone,   911/911
(100 %)
58 diff
(93.7 %id)
DA787032 brain .t 164 to 728 2 to 566   tiling clone, capped   565/565
(100 %)
1 diff
(99.9 %id)
BE881821 leiomyosarcoma, uterus .t 215 to 1039 1 to 768       692/768
(90 %)
62 diff
(92.0 %id)
DA265837 caudate nucleus .t 333 to 895 2 to 565   capped   564/564
(100 %)
5 diff
(99.2 %id)
BM476312 duodenal adenocarcinoma, cell line, small intestine .t 486 to 1086 1 to 606   tiling clone,   606/1192
(50 %)
23 diff
(98.1 %id)
BG326146 Kidney, renal cell adenocarcinoma .t 502 to 906 1 to 410   tiling clone,   410/1063
(38 %)
10 diff
(99.1 %id)
DB315391 brain .t 1782 to 2317 537 to 1   tiling clone, to resequence,   537/537
(100 %)
2 diff
(99.7 %id)
AI123000 pooled .u 1 to 632 632 to 5 F2X G6A V8S T9P L10S ... tiling clone,   628/632
(99 %)
16 diff
(97.5 %id)
AI187892   .u 102 to 632 533 to 3   tiling clone,   531/533
(99 %)
4 diff
(99.3 %id)
DA534115 brain .va 1 to 567 2 to 568 P70L tiling clone, capped   567/567
(100 %)
2 diff
(99.7 %id)
AL514996 neuroblastoma, placenta .va 15 to 924 1 to 911 R62* tiling clone,   911/911
(100 %)
11 diff
(98.8 %id)
AL138292 brain .va 278 to 637 1 to 360   tiling clone,   360/360
(100 %)
1 diff
(99.8 %id)
AL514995 neuroblastoma, placenta .va 1328 to 1946 620 to 1   tiling clone,   620/753
(82 %)
0 diff
(100 %id)
BP214937 corpus callosum .vb 1 to 582 1 to 582 exact tiling clone,   582/582
(100 %)
0 diff
(100 %id)
AK301053 Spleen .vc 1 to 980 2 to 981 exact tiling clone,   981/981
(100 %)
2 diff
(99.8 %id)
DA934533 Spleen .vc 1 to 578 2 to 579 exact capped   578/578
(100 %)
0 diff
(100 %id)
DB259499 uterus .vc 24 to 600 2 to 578 exact capped   577/577
(100 %)
1 diff
(99.9 %id)
CT003657 T-Lymphocytes .vc 34 to 540 1 to 507 exact     507/507
(100 %)
0 diff
(100 %id)
DA499890 brain .vd 1 to 554 2 to 555 exact tiling clone, capped   554/554
(100 %)
0 diff
(100 %id)
DA741736   .vd 2 to 468 2 to 468 F92S capped   467/475
(98 %)
2 diff
(99.6 %id)
DA079596 cerebellum .vd 5 to 576 2 to 574 V37C D39R S40L D41G Q43A ... tiling clone, capped   573/575
(99 %)
3 diff
(99.5 %id)
DA156145 amygdala .vd 5 to 481 2 to 478 N14D capped   477/477
(100 %)
2 diff
(99.6 %id)
DA292878 hippocampus .vd 5 to 563 2 to 560 exact capped   559/559
(100 %)
0 diff
(100 %id)
DA443095 tongue, tumor tissue .vd 5 to 584 2 to 581 exact capped   580/580
(100 %)
1 diff
(99.9 %id)
DA788943 brain .vd 5 to 500 2 to 499 V37S D39R S40L D41G Q43A ... capped   498/498
(100 %)
3 diff
(99.4 %id)
DA789888 brain .vd 5 to 575 2 to 573 V37X D39R S40L D41G Q43A ... capped   572/572
(100 %)
1 diff
(99.9 %id)
BG769657 melanotic melanoma, high MDR (cell line), skin .vd 272 to 1303 1 to 1017       1017/1018
(99 %)
57 diff
(94.5 %id)
BQ068678 brain, neuroblastoma, cell line .vd 291 to 1176 1 to 902       902/978
(92 %)
56 diff
(94.3 %id)
BE793468 lung, small cell carcinoma .vd 292 to 1105 1 to 823       823/959
(85 %)
62 diff
(93.6 %id)
BF826020 head_normal .ve-u 1 to 419 1 to 418       418/423
(98 %)
5 diff
(98.9 %id)
BF826107 head_normal .ve-u 8 to 419 21 to 431       411/431
(95 %)
6 diff
(98.7 %id)
BF826773 head_normal .ve-u 10 to 427 24 to 441   tiling clone,   418/442
(94 %)
6 diff
(98.7 %id)
BF825766 head_normal .ve-u 333 to 906 610 to 33 S12T S51P G55W S56Q S59F ...   Submitted on the opposite strand 578/610
(94 %)
0 diff
(100 %id)
BF882709 lung_tumor .ve-u 416 to 852 1 to 437   tiling clone,   437/437
(100 %)
1 diff
(99.8 %id)
BE273695 Kidney, renal cell adenocarcinoma .ve-u 459 to 1200 56 to 793   tiling clone,   738/793
(93 %)
6 diff
(99.3 %id)
BE311930 Kidney, renal cell adenocarcinoma .ve-u 459 to 1128 28 to 697       670/718
(93 %)
36 diff
(95.0 %id)
BG770340 melanotic melanoma, high MDR (cell line), skin .ve-u 570 to 1359 1 to 794       794/799
(99 %)
16 diff
(98.0 %id)
BI045672 prostate_normal .ve-u 613 to 825 1 to 213       213/224
(95 %)
8 diff
(96.5 %id)
BF962672 nervous_normal .ve-u 645 to 910 1 to 266       266/266
(100 %)
6 diff
(97.8 %id)
CV354940 lung_tumor .ve-u 801 to 1406 641 to 35     Submitted on the opposite strand 607/642
(94 %)
0 diff
(100 %id)
CV408959 head_neck .ve-u 883 to 1292 415 to 1     Submitted on the opposite strand 415/415
(100 %)
16 diff
(96.2 %id)
CV374126 placenta_normal .ve-u 932 to 1394 462 to 2   tiling clone, Submitted on the opposite strand 461/462
(99 %)
0 diff
(100 %id)
BE174860 head_neck .ve-u 1022 to 1353 27 to 359       333/368
(90 %)
6 diff
(98.4 %id)
AI907984 breast .ve-u 1041 to 1375 376 to 42       335/378
(88 %)
0 diff
(100 %id)
BI045644 prostate_normal .ve-u 1041 to 1410 663 to 294   tiling clone,   370/411
(90 %)
0 diff
(100 %id)
BF962643 nervous_normal .ve-u 1109 to 1409 14 to 314       301/315
(95 %)
11 diff
(96.6 %id)
DA915046   .vf 1 to 555 2 to 556   tiling clone, capped   555/555
(100 %)
0 diff
(100 %id)
CN275710 embryonic stem cells, DMSO-treated H9 cellline .vf 30 to 522 1 to 493       493/493
(100 %)
0 diff
(100 %id)
DA908167   .vf 60 to 587 2 to 529   capped   528/528
(100 %)
1 diff
(99.9 %id)
DA688755   .vf 78 to 619 2 to 544   capped   543/543
(100 %)
2 diff
(99.7 %id)
DA050970   .vf 82 to 586 2 to 507   capped   506/506
(100 %)
2 diff
(99.7 %id)
BQ935359 large cell carcinoma, lung .vf 90 to 1007 1 to 926 P29A P77A R78K V79G T80H ...     926/937
(98 %)
51 diff
(94.6 %id)
BQ225539 large cell carcinoma, lung .vf 91 to 892 1 to 815 G61S T74N R78K S86N W94G ...     815/1053
(77 %)
39 diff
(96.3 %id)
BI869712 adenocarcinoma, cell line, Liver .vf 114 to 852 20 to 765 R97Q S98E V99C K100E T101N ...     746/765
(97 %)
7 diff
(99.1 %id)
TI_57229011   .vf 114 to 852 73 to 818 R97Q S98E V99C K100E T101N ...     746/765
(97 %)
7 diff
(99.1 %id)
AK292219 esophagus, tumor tissue .vf 158 to 1977 1 to 1820 exact tiling clone,   1820/1820
(100 %)
1 diff
(100.0 %id)
DB018377 esophageal, tumor tissue .vf 159 to 732 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
BI085386 astrocytoma grade IV, cell line, brain .vf 277 to 920 1 to 654 A102D T103D A104C C105L R106Q ...     654/655
(99 %)
20 diff
(97.0 %id)
BM909301 astrocytoma grade IV, cell line, brain .vf 279 to 1005 1 to 738 exact     738/1163
(63 %)
35 diff
(97.0 %id)
AK307201 brain .vg 1 to 888 1 to 888 exact tiling clone,   888/888
(100 %)
3 diff
(99.7 %id)
DA497391 brain .vg 2 to 580 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
AI204082   .vh 1 to 437 444 to 8 exact tiling clone,   437/444
(98 %)
0 diff
(100 %id)
DB052116 testis .vi 1 to 571 2 to 572 exact tiling clone, capped   571/571
(100 %)
0 diff
(100 %id)
AI815837 brain, frontal lobe .vi 8 to 203 1 to 196   fully sequenced,   196/196
(100 %)
0 diff
(100 %id)
AI816350 brain, frontal lobe .vi 10 to 203 1 to 194   fully sequenced,   194/194
(100 %)
0 diff
(100 %id)
AW163572 brain, frontal lobe .vi 10 to 203 1 to 194   fully sequenced,   194/194
(100 %)
0 diff
(100 %id)
CD621833   .vi 12 to 200 191 to 3       189/203
(93 %)
1 diff
(99.6 %id)
CD621842   .vi 12 to 200 192 to 3       190/193
(98 %)
1 diff
(99.5 %id)
CD621840   .vi 16 to 200 190 to 3       188/191
(98 %)
9 diff
(95.3 %id)
CD621847   .vi 16 to 200 188 to 3       186/188
(98 %)
0 diff
(100 %id)
CD621839   .vi 20 to 200 183 to 3       181/183
(98 %)
0 diff
(100 %id)
CD621851   .vi 21 to 200 189 to 3       187/197
(94 %)
11 diff
(94.5 %id)
CD621854   .vi 26 to 200 177 to 3       175/177
(98 %)
0 diff
(100 %id)
CD621834   .vi 30 to 200 179 to 3       175/179
(97 %)
6 diff
(96.7 %id)
CD621849   .vi 34 to 200 169 to 3       167/169
(98 %)
5 diff
(97.1 %id)
AA232450 brain, neuroepithelial cells .vi 65 to 159 1 to 96       96/96
(100 %)
2 diff
(98.0 %id)
CD621856   .vi 69 to 200 134 to 3       132/140
(94 %)
0 diff
(100 %id)
AI816270 brain, frontal lobe .vi 128 to 208 81 to 1   fully sequenced,   81/81
(100 %)
0 diff
(100 %id)
AW162854 brain, frontal lobe .vi 128 to 229 102 to 1   fully sequenced,   102/102
(100 %)
0 diff
(100 %id)
AI815992 brain, frontal lobe .vi 142 to 208 67 to 1   fully sequenced,   67/67
(100 %)
0 diff
(100 %id)
BG764279 melanotic melanoma, high MDR (cell line), skin .vj 1 to 869 1 to 871   tiling clone,   871/871
(100 %)
8 diff
(99.1 %id)
AI346024 adenocarcinoma, colon .vj 637 to 1189 556 to 3 I30H A31C L32S F33L F34L ... tiling clone,   554/556
(99 %)
1 diff
(99.9 %id)
AI346512 adenocarcinoma, colon .vj 676 to 1189 516 to 3 E46D N57I D96A tiling clone,   514/516
(99 %)
1 diff
(99.9 %id)
DA074047 cerebellum .vk 1 to 578 2 to 579   tiling clone, capped   578/578
(100 %)
0 diff
(100 %id)
DB297667 cerebellum .vk 1316 to 1841 526 to 1   tiling clone,   526/526
(100 %)
1 diff
(99.9 %id)
CD654157 Embryonic Stem cells .vk 1531 to 2284 14 to 763   tiling clone,   750/766
(97 %)
6 diff
(99.3 %id)
DA119326 cerebellum .vk 1691 to 2225 2 to 537   capped   536/536
(100 %)
1 diff
(99.9 %id)
AW864747 stomach_normal .vk 1784 to 2025 12 to 254       243/254
(95 %)
6 diff
(97.7 %id)
BI055280 placenta_normal .vk 1835 to 2135 16 to 315       300/315
(95 %)
6 diff
(98.1 %id)
DA528977 brain .vk 1984 to 2588 2 to 607   tiling clone, to resequence, capped   606/606
(100 %)
2 diff
(99.7 %id)
DW425648 Liver .vk 2106 to 2376 14 to 284       271/284
(95 %)
6 diff
(97.9 %id)
DB317597 brain .vk 3222 to 3778 560 to 1 exact tiling clone, to resequence,   560/560
(100 %)
3 diff
(99.5 %id)
DA411679 thalamus .vl 1 to 558 2 to 559 exact tiling clone, capped   558/558
(100 %)
0 diff
(100 %id)
DA120463 cerebellum .vm 1 to 551 2 to 552 exact capped   551/551
(100 %)
0 diff
(100 %id)
DA797741 brain .vm 1 to 554 2 to 556 V37X D39R S40L D41G Q43A ... capped   555/555
(100 %)
1 diff
(99.9 %id)
DA802655 brain .vm 1 to 532 2 to 534 V37X D39R S40L D41G Q43A ... capped   533/533
(100 %)
1 diff
(99.9 %id)
DA802715 brain .vm 1 to 560 2 to 561 exact tiling clone, capped   560/560
(100 %)
0 diff
(100 %id)
DA097209 cerebellum .vm 2 to 518 2 to 518 exact capped   517/517
(100 %)
0 diff
(100 %id)
DA050117   .vn 1 to 565 2 to 566 exact tiling clone, capped   565/565
(100 %)
0 diff
(100 %id)
DB038963 testis .vo 1 to 560 2 to 561 exact tiling clone, capped   560/560
(100 %)
1 diff
(99.9 %id)
BX507104 Liver .vp 1 to 445 154 to 598 exact tiling clone,   445/598
(74 %)
6 diff
(99.0 %id)
BE840841 stomach_normal .vq 1 to 152 1 to 152       152/152
(100 %)
6 diff
(96.1 %id)
DB507518 testis .vq 3 to 403 1 to 401   tiling clone, Submitted on the opposite strand 401/401
(100 %)
0 diff
(100 %id)
BQ326934 colon_normal .vr 1 to 374 22 to 396 M8R C9W V10R P11S P12T ... tiling clone,   377/396
(95 %)
7 diff
(98.3 %id)
C18567 placenta .vr 86 to 433 1 to 346   tiling clone,   346/346
(100 %)
5 diff
(98.6 %id)
CA942984 Pancreas, Purified pancreatic islet .vs 1 to 544 1 to 544 P30S tiling clone,   544/544
(100 %)
2 diff
(99.7 %id)
BF929531 nervous_tumor .vt 1 to 373 1 to 365       365/365
(100 %)
13 diff
(96.5 %id)
BI055290 placenta_normal .vt 28 to 416 382 to 1   tiling clone,   382/384
(99 %)
12 diff
(96.9 %id)
AW967652   .vt 279 to 765 29 to 515   tiling clone,   487/557
(87 %)
7 diff
(98.8 %id)
AA251630 germinal center B cell .vt 279 to 735 8 to 464   fully sequenced,   457/464
(98 %)
6 diff
(98.8 %id)
AI439622 B-cell, chronic lymphotic leukemia .vt 306 to 736 431 to 1       431/431
(100 %)
1 diff
(99.8 %id)
AI287848 Kidney, renal cell tumor .vt 339 to 745 407 to 1       407/407
(100 %)
0 diff
(100 %id)
BU929477 placenta .vt 374 to 735 1 to 362       362/397
(91 %)
2 diff
(99.5 %id)
AA572718   .vt 378 to 832 9 to 463       455/463
(98 %)
6 diff
(98.8 %id)
AI732224   .vt 378 to 841 9 to 472       464/472
(98 %)
1 diff
(99.8 %id)
AA570804   .vt 378 to 740 7 to 369       363/369
(98 %)
2 diff
(99.5 %id)
AI821427   .vt 378 to 902 11 to 535       525/535
(98 %)
6 diff
(98.9 %id)
DW467547 Liver .vt 380 to 708 17 to 345       329/345
(95 %)
6 diff
(98.3 %id)
BG056503 brain, glioblastoma with probably TP53 mutation andwithout EGFR amplification .vt 485 to 903 418 to 1   tiling clone,   418/418
(100 %)
1 diff
(99.8 %id)
AA251302 germinal center B cell .vt 490 to 739 248 to 1   fully sequenced,   248/248
(100 %)
4 diff
(98.4 %id)
AK127949 breast, tumor tissue .vt 654 to 2188 1 to 1535 exact tiling clone, available from FLJ,   1535/1535
(100 %)
3 diff
(99.9 %id)
DB001490 breast, tumor tissue .vt 655 to 959 2 to 306   capped   305/305
(100 %)
2 diff
(99.4 %id)
BF824777 head_normal .vt 1085 to 1368 25 to 308       284/308
(92 %)
6 diff
(98.1 %id)
BM888531 eye .vt 1094 to 1575 1 to 486       486/492
(98 %)
12 diff
(97.6 %id)
CV374314 placenta_normal .vt 1494 to 1600 103 to 1     Submitted on the opposite strand 103/103
(100 %)
4 diff
(96.2 %id)
AW976340   .vt 1565 to 2187 625 to 1 exact   Submitted on the opposite strand 625/625
(100 %)
13 diff
(98.0 %id)
BF352465 head_neck .vt 1579 to 1928 1 to 350       350/350
(100 %)
0 diff
(100 %id)
CR981557 T-Lymphocytes .vt 1582 to 2085 1 to 505 E52G W53V D54G     505/515
(98 %)
2 diff
(99.7 %id)
AA778266 heart .vt 1704 to 2145 442 to 1 exact     442/442
(100 %)
1 diff
(99.8 %id)
AI332820 lung .vt 1748 to 2194 450 to 4 exact tiling clone,   447/450
(99 %)
0 diff
(100 %id)
AA761034 germinal center B cell .vt 1795 to 2188 405 to 12 exact AAA   394/394
(100 %)
0 diff
(100 %id)
BQ720858 sympathetic trunk .vu-u 1 to 858 12 to 878   tiling clone,   867/948
(91 %)
19 diff
(98.0 %id)
T57965 fetal spleen, Spleen .vu-u 416 to 774 1 to 376       376/398
(94 %)
24 diff
(94.0 %id)
BM705382 eye, lens .vu-u 593 to 990 1 to 398   tiling clone, fully sequenced,   398/398
(100 %)
0 diff
(100 %id)
CA411651 Knee, Osteoarthritic Cartilage .vu-u 658 to 1404 764 to 19 exact tiling clone, AAA   746/749
(99 %)
3 diff
(99.6 %id)
T57883 fetal spleen, Spleen .vu-u 918 to 1394 486 to 12       475/488
(97 %)
0 diff
(100 %id)
BU734760 eye, lens .vu-u 960 to 1403 465 to 22   tiling clone, fully sequenced,   444/465
(95 %)
0 diff
(100 %id)
DA646220 mammary gland .vv-u -8 to 793 2 to 807 K13* tiling clone, capped   806/806
(100 %)
6 diff
(99.3 %id)
CV415701 colon .vv-u 611 to 888 1 to 280   tiling clone,   280/292
(95 %)
6 diff
(98.0 %id)
BE811121 amnion_normal .vv-u 807 to 1368 563 to 1   tiling clone,   563/563
(100 %)
4 diff
(99.3 %id)
DA685560   .vw 1 to 549 2 to 553 exact tiling clone, capped   552/552
(100 %)
3 diff
(99.5 %id)
DB236219 trachea .vx 1 to 541 2 to 542 exact tiling clone, capped   541/541
(100 %)
0 diff
(100 %id)
AI078481 liver and spleen .vy-u 1 to 425 425 to 1 exact tiling clone,   425/425
(100 %)
0 diff
(100 %id)
BE245976 leukopheresis .vz-u 1 to 385 385 to 1 exact tiling clone,   385/385
(100 %)
3 diff
(99.3 %id)
AA323593 brain, cerebellum .wa-u 1 to 231 1 to 231 E43X tiling clone,   231/231
(100 %)
1 diff
(99.6 %id)
AA346455 heart Gene TCF25andMC1RandTUBB3, variant not shown              
BG993458 head_neck Gene TCF25andMC1RandTUBB3, variant not shown              
BE153679 head_neck Gene TCF25andMC1RandTUBB3, variant not shown         Submitted on the opposite strand    
AK127418 thalamus Gene TCF25andMC1RandTUBB3, variant not shown       available from FLJ,      
CN414314 embryonic stem cells, DMSO-treated H9 cellline Gene TCF25andMC1RandTUBB3, variant not shown              
DB362271 mammary gland Gene TCF25andMC1RandTUBB3, variant not shown              
DA647388 mammary gland Gene TCF25andMC1RandTUBB3, variant not shown       capped      
DW452241 Liver Gene TCF25andMC1RandTUBB3, variant not shown              
AA326372 brain, cerebellum Gene TCF25andMC1RandTUBB3, variant not shown              
DA385810 thalamus Gene TCF25andMC1RandTUBB3, variant not shown       capped      
BU078873 Pancreas, Purified pancreatic islet Gene TCF25andMC1RandTUBB3, variant not shown              
BU079157 Pancreas, Purified pancreatic islet Gene TCF25andMC1RandTUBB3, variant not shown              
339 other accessions, mainly redundant or of lesser quality, also belong to this gene but are not reported.
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o-u, .p, .q, .r, .s, .t, .u, .va, .vb, .vc, .vd, .ve-u, .vf, .vg, .vh, .vi, .vj, .vk, .vl, .vm, .vn, .vo, .vp, .vq, .vr, .vs, .vt, .vu-u, .vv-u, .vw, .vx, .vy-u, .vz-u, .wa-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI