cDNA accession Links to the sequence |
Tissue most 5' clones in red |
Match mRNA |
From bp to bp in mRNA |
From bp to bp in accs. |
Clone encodes complete protein (with AA variation) |
Features | Anomalies detected by AceView |
Accession match over (% length) |
Base differences relative to genome (% identity) |
AA771872 | parathyroid gland, parathyroid tumor | .a | 4048 to 4373 | 331 to 6 | 326/331 (98 %) | 0 diff (100 %id) | |||
AA782136 | parathyroid gland, parathyroid tumor | .a | 3993 to 4373 | 386 to 6 | 381/386 (98 %) | 0 diff (100 %id) | |||
AA299877 | uterus | .a | 1195 to 1540 | 1 to 346 | Submitted on the opposite strand | 346/346 (100 %) | 4 diff (98.9 %id) | ||
AA322404 | brain, cerebellum | .a | 3252 to 3578 | 330 to 1 | Submitted on the opposite strand | 330/330 (100 %) | 4 diff (98.8 %id) | ||
AA363130 | ovary | .a | 3476 to 3814 | 9 to 347 | 339/347 (97 %) | 12 diff (96.6 %id) | |||
AA376748 | small intestine | .a | 3534 to 3872 | 12 to 347 | 336/351 (95 %) | 4 diff (98.9 %id) | |||
AB023219 | brain | .b | 1 to 4330 | 1 to 4331 | L151T V152G E153G E154R S155I ... | tiling clone, available from KIAA, | 4331/4331 (100 %) | 2 diff (100.0 %id) | |
AF113695 | Liver | .a | 3195 to 4350 | 1 to 1157 | tiling clone, AAA | Possibly primed on the genome, locally A rich (11/11 A in genome downstream of last aligned base) | 1157/1157 (100 %) | 1 diff (100.0 %id) | |
AI114761 | Liver | .a | 3195 to 3874 | 1 to 681 | 681/681 (100 %) | 6 diff (99.2 %id) | |||
AJ572223 | pectoral muscle (after mastectomy) | .e | 3306 to 3523 | 9 to 229 | 221/233 (94 %) | 7 diff (97.0 %id) | |||
AJ572651 | pectoral muscle (after mastectomy) | .e | 3277 to 3526 | 1 to 250 | AAA | 250/250 (100 %) | 1 diff (99.6 %id) | ||
AJ572748 | pectoral muscle (after mastectomy) | .e | 3271 to 3526 | 8 to 263 | AAA | 256/263 (97 %) | 6 diff (97.8 %id) | ||
AK057013 | skeletal muscle | .e | 1884 to 3526 | 1 to 1643 | tiling clone, available from FLJ, | 1643/1643 (100 %) | 0 diff (100 %id) | ||
AK293394 | bladder | .e | 1 to 2106 | 2 to 2107 | Q447H | tiling clone, | 2107/2107 (100 %) | 1 diff (100.0 %id) | |
AK300688 | skeletal muscle | .j | 64 to 1015 | 1 to 952 | exact | tiling clone, | 952/952 (100 %) | 1 diff (99.9 %id) | |
AK311513 | skeletal muscle | .m | 1 to 1137 | 7 to 1143 | exact | tiling clone, | 1143/1143 (100 %) | 3 diff (99.8 %id) | |
AW362785 | colon | .d | 85 to 612 | 6 to 533 | 528/536 (98 %) | 6 diff (98.9 %id) | |||
AW371039 | breast | .a | 2921 to 3194 | 27 to 299 | 273/378 (72 %) | 13 diff (96.6 %id) | |||
AW388680 | stomach | .a | 3480 to 3623 | 1 to 143 | 143/147 (97 %) | 5 diff (96.6 %id) | |||
AW388702 | stomach | .a | 3427 to 3605 | 1 to 178 | 178/178 (100 %) | 7 diff (96.1 %id) | |||
AW388714 | stomach | .a | 3459 to 3583 | 8 to 137 | 130/141 (92 %) | 7 diff (95.1 %id) | |||
AW581557 | pnet | .a | 3267 to 3447 | 1 to 181 | 181/181 (100 %) | 7 diff (96.2 %id) | |||
AW875303 | pnet | .a | 3260 to 3447 | 185 to 1 | 185/185 (100 %) | 3 diff (98.4 %id) | |||
AW875353 | pnet | .a | 3260 to 3448 | 204 to 21 | 184/204 (90 %) | 0 diff (100 %id) | |||
AW883030 | ovary | .a | 3307 to 3582 | 305 to 31 | 275/306 (89 %) | 0 diff (100 %id) | |||
AW903983 | nervous_normal | .a | 1907 to 2201 | 315 to 9 | 307/315 (97 %) | 13 diff (95.9 %id) | |||
AW960864 | .a | 3119 to 3562 | 445 to 1 | Submitted on the opposite strand | 445/466 (95 %) | 31 diff (93.4 %id) | |||
AX775761 | .b | 1 to 4330 | 1 to 4331 | L151T V152G E153G E154R S155I ... | 4331/4331 (100 %) | 2 diff (100.0 %id) | |||
AX775763 | .a | 1 to 4372 | 1 to 4373 | L151T V152G E153G E154R S155I ... | tiling clone, | 4373/4373 (100 %) | 2 diff (100.0 %id) | ||
BC008069 | Muscle, rhabdomyosarcoma | .f | 8 to 1570 | 1 to 1563 | exact | tiling clone, available from MGC, AAA | 1563/1563 (100 %) | 0 diff (100 %id) | |
BC041857 | testis | .d | 654 to 4428 | 12 to 3784 | G86S | tiling clone, available from MGC, AAA | 3773/3784 (99 %) | 9 diff (99.8 %id) | |
BC104995 | Brain, cerebral cortex and lung, PCR rescuedclones | .a | 1392 to 3411 | 1 to 2020 | 2020/2020 (100 %) | 2 diff (100.0 %id) | |||
BC112226 | Brain, cerebral cortex and lung, PCR rescuedclones | .a | 1392 to 3405 | 1 to 2014 | 2014/2014 (100 %) | 0 diff (100 %id) | |||
BC143605 | Brain, cerebral cortex and lung, PCR rescuedclones | .c | 626 to 2748 | 1 to 2123 | tiling clone, | 2123/2123 (100 %) | 1 diff (100.0 %id) | ||
TI_1241109691 | .a | 1386 to 2521 | 41 to 1178 | 1138/1247 (91 %) | 17 diff (98.7 %id) | ||||
TI_1241109697 | .a | 2325 to 3412 | 1151 to 69 | 1083/1232 (87 %) | 15 diff (98.8 %id) | ||||
TI_1241110221 | .a | 3028 to 3412 | 16 to 400 | 385/1197 (32 %) | 2 diff (99.9 %id) | ||||
TI_1241110519 | .a | 2638 to 3412 | 3 to 778 | 776/1004 (77 %) | 9 diff (99.2 %id) | ||||
TI_1241110521 | .a | 1782 to 2545 | 1 to 767 | 767/767 (100 %) | 8 diff (99.0 %id) | ||||
TI_1241110911 | .a | 1949 to 2701 | 771 to 19 | 753/771 (97 %) | 1 diff (99.9 %id) | ||||
TI_1241113071 | .a | 1386 to 2607 | 41 to 1256 | 1216/1265 (96 %) | 34 diff (97.4 %id) | ||||
TI_1241113455 | .a | 2206 to 3412 | 1260 to 69 | 1196/1262 (94 %) | 24 diff (98.1 %id) | ||||
TI_1242415238 | .a | 2362 to 3418 | 1101 to 49 | Submitted on the opposite strand | 1053/1202 (87 %) | 7 diff (99.5 %id) | |||
TI_1242415244 | .a | 1386 to 2568 | 59 to 1230 | Submitted on the opposite strand | 1172/1236 (94 %) | 27 diff (97.9 %id) | |||
TI_1242415466 | .a | 3024 to 3418 | 10 to 405 | 396/1210 (32 %) | 4 diff (99.7 %id) | ||||
TI_1242415660 | .a | 2272 to 3225 | 1 to 953 | 953/956 (99 %) | 15 diff (98.5 %id) | ||||
TI_1242415662 | .a | 3023 to 3418 | 27 to 422 | 396/962 (41 %) | 3 diff (99.7 %id) | ||||
TI_2194576231 | .a | 2305 to 3412 | 1154 to 57 | Submitted on the opposite strand | 1098/1273 (86 %) | 12 diff (99.1 %id) | |||
TI_2194576612 | .c | 620 to 1632 | 56 to 1065 | Submitted on the opposite strand | 1010/1269 (79 %) | 13 diff (99.0 %id) | |||
TI_2194578305 | .a | 2345 to 3412 | 1119 to 54 | Submitted on the opposite strand | 1066/1212 (87 %) | 12 diff (99.1 %id) | |||
TI_2194578312 | .a | 2329 to 3412 | 1131 to 53 | Submitted on the opposite strand | 1079/1209 (89 %) | 19 diff (98.5 %id) | |||
TI_2194578319 | .c | 620 to 1639 | 58 to 1079 | Submitted on the opposite strand | 1022/1222 (83 %) | 17 diff (98.7 %id) | |||
TI_2194578326 | .c | 620 to 1754 | 57 to 1192 | Submitted on the opposite strand | 1136/1226 (92 %) | 28 diff (97.8 %id) | |||
TI_2194578543 | .a | 3023 to 3412 | 25 to 414 | 390/1221 (31 %) | 1 diff (100.0 %id) | ||||
TI_2194578544 | .a | 2297 to 3394 | 16 to 1109 | 1094/1193 (91 %) | 25 diff (98.0 %id) | ||||
TI_2194578666 | .a | 1796 to 2544 | 16 to 764 | 749/764 (98 %) | 6 diff (99.3 %id) | ||||
BE063405 | breast | .a | 2921 to 3194 | 27 to 299 | 273/378 (72 %) | 13 diff (96.6 %id) | |||
BE088260 | breast | .a | 1730 to 2061 | 16 to 358 | 354/358 (98 %) | 56 diff (84.4 %id) | |||
BE707399 | head_neck | .a | 2603 to 2901 | 306 to 10 | 297/316 (93 %) | 6 diff (98.2 %id) | |||
BE938601 | testis_normal | .u | 1 to 188 | 9 to 198 | A4V K6* | tiling clone, | 190/198 (95 %) | 7 diff (96.5 %id) | |
BF089374 | head_neck | .e | 2285 to 2552 | 299 to 30 | 270/299 (90 %) | 6 diff (98.0 %id) | |||
BF089775 | head_neck | .a | 1352 to 1631 | 308 to 16 | 293/331 (88 %) | 19 diff (94.3 %id) | |||
BF095664 | uterus_tumor | .a | 548 to 894 | 346 to 1 | 346/350 (98 %) | 17 diff (95.2 %id) | |||
BF755470 | colon | .a | 638 to 838 | 201 to 1 | Submitted on the opposite strand | 201/201 (100 %) | 2 diff (99.1 %id) | ||
BF803887 | colon_ins | .a | 1274 to 1541 | 273 to 8 | Submitted on the opposite strand | 266/290 (91 %) | 1 diff (99.7 %id) | ||
BF830126 | head_normal | .a | 2720 to 3094 | 7 to 388 | 382/403 (94 %) | 21 diff (94.8 %id) | |||
BF834892 | head_neck | .a | 3098 to 3442 | 1 to 348 | 348/348 (100 %) | 7 diff (98.0 %id) | |||
BF856406 | prostate_normal | .a | 2459 to 2898 | 440 to 3 | Submitted on the opposite strand | 438/440 (99 %) | 0 diff (100 %id) | ||
BF856407 | prostate_normal | .a | 2461 to 2823 | 365 to 1 | Submitted on the opposite strand | 365/365 (100 %) | 3 diff (99.2 %id) | ||
BF879180 | lung_tumor | .a | 1683 to 1830 | 1 to 145 | 145/147 (98 %) | 10 diff (93.2 %id) | |||
BF892411 | marrow | .e | 2418 to 2730 | 21 to 337 | 317/337 (94 %) | 20 diff (94.1 %id) | |||
BF893514 | marrow | .e | 2593 to 2761 | 1 to 167 | 167/167 (100 %) | 1 diff (99.5 %id) | |||
BF903217 | marrow | .a | 1328 to 1634 | 53 to 361 | 310/362 (85 %) | 7 diff (98.1 %id) | |||
BF913344 | uterus_tumor | .a | 1816 to 2268 | 31 to 485 | 455/506 (89 %) | 17 diff (96.7 %id) | |||
BF930945 | nervous_tumor | .a | 1478 to 1864 | 388 to 1 | Submitted on the opposite strand | 388/388 (100 %) | 15 diff (96.2 %id) | ||
BF931343 | nervous_tumor | .a | 1439 to 1863 | 427 to 4 | Submitted on the opposite strand | 424/427 (99 %) | 5 diff (98.9 %id) | ||
BF931345 | nervous_tumor | .a | 1361 to 1825 | 1 to 465 | 465/465 (100 %) | 9 diff (98.1 %id) | |||
BF931378 | nervous_tumor | .a | 984 to 1403 | 22 to 442 | 421/442 (95 %) | 14 diff (96.9 %id) | |||
BF931386 | nervous_tumor | .a | 1596 to 1847 | 250 to 1 | Submitted on the opposite strand | 250/252 (99 %) | 8 diff (96.9 %id) | ||
BF931591 | nervous_tumor | .a | 1028 to 1385 | 1 to 358 | 358/358 (100 %) | 10 diff (97.3 %id) | |||
BF933382 | nervous_tumor | .a | 1989 to 2268 | 16 to 296 | 281/298 (94 %) | 12 diff (96.0 %id) | |||
BF935535 | nervous_tumor | .a | 984 to 1327 | 1 to 345 | 343/345 (99 %) | 4 diff (98.9 %id) | |||
BF944895 | nervous_normal | .a | 2656 to 3098 | 470 to 26 | Submitted on the opposite strand | 445/470 (94 %) | 0 diff (100 %id) | ||
BF955291 | nervous_normal | .a | 1044 to 1558 | 1 to 515 | 515/515 (100 %) | 4 diff (99.3 %id) | |||
BF955330 | nervous_normal | .a | 2718 to 2922 | 200 to 404 | 205/405 (50 %) | 8 diff (98.1 %id) | |||
BF960161 | nervous_normal | .a | 1453 to 1840 | 401 to 11 | 391/401 (97 %) | 1 diff (99.8 %id) | |||
BF985598 | placenta_normal | .va-u | 1 to 161 | 19 to 182 | Q7R A8L G9V L10S D11T ... | tiling clone, | 164/185 (88 %) | 8 diff (95.7 %id) | |
BF996494 | placenta_normal | .a | 1208 to 1697 | 492 to 3 | 490/494 (99 %) | 2 diff (99.6 %id) | |||
BG007606 | placenta_normal | .a | 1372 to 1694 | 16 to 332 | 317/332 (95 %) | 7 diff (97.9 %id) | |||
BG014460 | placenta_normal | .a | 630 to 938 | 1 to 307 | 307/307 (100 %) | 3 diff (99.1 %id) | |||
BG014466 | placenta_normal | .a | 631 to 905 | 1 to 286 | 282/286 (98 %) | 13 diff (95.5 %id) | |||
BG951071 | colon | .a | 1730 to 2003 | 14 to 296 | 294/296 (99 %) | 56 diff (81.1 %id) | |||
BG954662 | colon | .a | 1745 to 2107 | 385 to 24 | 362/385 (94 %) | 0 diff (100 %id) | |||
BG977215 | colon_est | .a | 1821 to 1969 | 15 to 166 | 152/166 (91 %) | 0 diff (100 %id) | |||
DA044884 | bladder | .e | 1 to 570 | 2 to 571 | capped | 570/570 (100 %) | 0 diff (100 %id) | ||
BQ328018 | kidney_tumor | .a | 3886 to 4145 | 20 to 278 | 259/278 (93 %) | 6 diff (97.9 %id) | |||
BQ328027 | kidney_tumor | .a | 3873 to 4145 | 1 to 270 | 270/270 (100 %) | 11 diff (96.0 %id) | |||
BQ330971 | lung_tumor | .a | 1356 to 1830 | 481 to 7 | 475/481 (98 %) | 6 diff (98.8 %id) | |||
BQ339055 | nervous_normal | .a | 1014 to 1260 | 1 to 247 | 247/249 (99 %) | 7 diff (97.2 %id) | |||
BQ340566 | nervous_normal | .i | 1 to 622 | 19 to 632 | L8Y L9* | tiling clone, | 613/650 (94 %) | 20 diff (97.0 %id) | |
BQ340602 | nervous_normal | .a | 371 to 730 | 10 to 364 | 355/364 (97 %) | 7 diff (98.1 %id) | |||
BQ340608 | nervous_normal | .i | 1 to 621 | 11 to 630 | H2S R3H G4S H5G C6T ... | tiling clone, | 630/631 (99 %) | 16 diff (97.5 %id) | |
BQ345943 | nervous_tumor | .r | 1 to 296 | 322 to 21 | R77L D79A I81D T82P S83P ... | tiling clone, | 298/324 (91 %) | 6 diff (98.2 %id) | |
BQ346058 | nervous_tumor | .c | 467 to 938 | 480 to 13 | 468/480 (97 %) | 2 diff (99.6 %id) | |||
BQ346219 | nervous_tumor | .a | 1098 to 1514 | 439 to 12 | 428/439 (97 %) | 12 diff (97.3 %id) | |||
BQ359742 | head_normal | .l | 815 to 1251 | 1 to 438 | tiling clone, | 438/440 (99 %) | 4 diff (99.1 %id) | ||
DA395851 | thalamus | .c | 21 to 626 | 2 to 607 | tiling clone, capped | 606/606 (100 %) | 0 diff (100 %id) | ||
CD626353 | .a | 1965 to 2747 | 800 to 20 | 781/800 (97 %) | 3 diff (99.7 %id) | ||||
CD626354 | .a | 1922 to 2747 | 1 to 829 | 829/855 (96 %) | 13 diff (98.5 %id) | ||||
CN332747 | embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells | .a | 856 to 1544 | 19 to 708 | 690/708 (97 %) | 7 diff (99.1 %id) | |||
CN332748 | embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells | .a | 1264 to 1984 | 1 to 721 | 721/721 (100 %) | 4 diff (99.5 %id) | |||
CN332749 | embryonic stem cells, cell lines H1, H7, andH9 | .a | 2134 to 2705 | 1 to 573 | 573/573 (100 %) | 1 diff (99.9 %id) | |||
CN332750 | embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 | .a | 3648 to 4055 | 12 to 419 | 408/419 (97 %) | 6 diff (98.6 %id) | |||
CN332751 | embryonic stem cells, cell lines H1, H7, andH9 | .a | 3770 to 4187 | 1 to 417 | 417/417 (100 %) | 5 diff (98.9 %id) | |||
CR596895 | T cells (Jurkat cell line) Cot10-normalized | .g | 604 to 1660 | 1 to 1057 | tiling clone, | 1057/1057 (100 %) | 0 diff (100 %id) | ||
BX410030 | brain, fetal brain | .d | 709 to 1091 | 1 to 381 | 381/389 (97 %) | 6 diff (98.5 %id) | |||
BX442310 | brain, fetal brain | .d | 1 to 1037 | 1 to 1031 | tiling clone, | 1031/1036 (99 %) | 29 diff (97.3 %id) | ||
BX348556 | .a | 4048 to 4322 | 7 to 281 | 275/305 (90 %) | 5 diff (98.4 %id) | ||||
BX400617 | .g | 604 to 1481 | 1 to 877 | 878/877 (100 %) | 9 diff (99.0 %id) | ||||
CV026493 | mixed | .e | 2196 to 2845 | 1 to 650 | 650/650 (100 %) | 0 diff (100 %id) | |||
CV362090 | nervous_normal | .a | 356 to 490 | 14 to 147 | tiling clone, | 134/147 (91 %) | 6 diff (96.0 %id) | ||
AL120641 | amygdala | .a | 1258 to 1890 | 1 to 633 | 633/633 (100 %) | 0 diff (100 %id) | |||
EC453635 | Prostate | .a | 4005 to 4120 | 1 to 114 | 114/114 (100 %) | 4 diff (96.5 %id) | |||
EC497325 | Prostate | .a | 4006 to 4120 | 1 to 116 | 116/116 (100 %) | 3 diff (97.5 %id) | |||
EC537436 | Prostate | .c | 1 to 104 | 1 to 103 | tiling clone, | 103/103 (100 %) | 3 diff (97.1 %id) | ||
EL951707 | eyeball | .a | 3692 to 4179 | 1 to 488 | 488/488 (100 %) | 4 diff (99.2 %id) | |||
EL955316 | eyeball | .a | 3378 to 3904 | 1 to 525 | 525/525 (100 %) | 7 diff (98.7 %id) | |||
FN097984 | breast carcinoma | .vb-u | 1 to 78 | 1 to 78 | exact | tiling clone, | 78/79 (98 %) | 1 diff (98.8 %id) | |
BY800460 | eye | .a | 1721 to 2356 | 1 to 636 | 636/636 (100 %) | 0 diff (100 %id) | |||
M85796 | .a | 2039 to 2391 | 1 to 354 | 354/354 (100 %) | 1 diff (99.8 %id) | ||||
R40849. matches multiple genes | whole brain | .a | 4023 to 4373 | 364 to 8 | also hits gene wahuru | 357/366 (97 %) | 0 diff (100 %id) | ||
H18807 | brain | .a | 3741 to 4202 | 1 to 475 | 475/476 (99 %) | 24 diff (95.0 %id) | |||
H19619 | brain | .a | 3741 to 4152 | 1 to 414 | 414/415 (99 %) | 8 diff (98.1 %id) | |||
H21489 | brain | .a | 3741 to 4134 | 1 to 395 | 395/395 (100 %) | 11 diff (97.3 %id) | |||
H22051 | brain | .a | 3741 to 4079 | 1 to 339 | 339/396 (85 %) | 7 diff (98.3 %id) | |||
AA028204 | heart | .a | 3853 to 4372 | 1 to 518 | fully sequenced, AAA | 518/518 (100 %) | 5 diff (99.1 %id) | ||
AA035611 | heart | .a | 4131 to 4375 | 246 to 1 | fully sequenced, | 246/246 (100 %) | 1 diff (99.6 %id) | ||
AA192755 | muscle, skeletal muscle | .e | 3010 to 3527 | 518 to 2 | 517/518 (99 %) | 0 diff (100 %id) | |||
AA192831 | muscle, skeletal muscle | .e | 2307 to 2489 | 1 to 183 | 183/183 (100 %) | 0 diff (100 %id) | |||
AA420787 | .a | 3496 to 3902 | 1 to 405 | 405/405 (100 %) | 10 diff (97.6 %id) | ||||
AA420801 | .a | 3496 to 3967 | 1 to 471 | 471/471 (100 %) | 12 diff (97.5 %id) | ||||
AA470612 | .a | 3496 to 3834 | 1 to 338 | 338/338 (100 %) | 9 diff (97.4 %id) | ||||
AA489986. matches multiple genes | .a | 4123 to 4372 | 280 to 31 | AAA | also hits gene shawsnor | 250/250 (100 %) | 0 diff (100 %id) | ||
AA491343. matches multiple genes | .a | 3641 to 4013 | 1 to 371 | also hits gene snortorby | 371/371 (100 %) | 7 diff (98.2 %id) | |||
AA514877 | colon | .a | 4123 to 4373 | 252 to 2 | 251/252 (99 %) | 0 diff (100 %id) | |||
AA527210 | Ewing's sarcoma | .a | 4133 to 4361 | 255 to 27 | AAA | 229/274 (83 %) | 0 diff (100 %id) | ||
AA653633 | .a | 4205 to 4373 | 169 to 1 | 169/169 (100 %) | 0 diff (100 %id) | ||||
AA706412 | .a | 4204 to 4373 | 170 to 1 | 170/170 (100 %) | 0 diff (100 %id) | ||||
AA889551 | .a | 3901 to 4371 | 481 to 11 | AAA | 471/471 (100 %) | 1 diff (99.8 %id) | |||
AI003834 | .l | 1 to 425 | 427 to -1 | tiling clone, | 427/430 (99 %) | 5 diff (98.9 %id) | |||
AA999900 | Kidney | .a | 4042 to 4372 | 331 to 1 | 331/331 (100 %) | 0 diff (100 %id) | |||
AI061428 | .a | 4204 to 4371 | 168 to 1 | 168/169 (99 %) | 0 diff (100 %id) | ||||
AI684329 | B-cell, chronic lymphotic leukemia | .a | 731 to 890 | 160 to 1 | 160/160 (100 %) | 3 diff (98.2 %id) | |||
AI457719 | pooled | .q | 1 to 319 | 329 to 11 | E45* | tiling clone, AAA | 319/319 (100 %) | 3 diff (99.1 %id) | |
AI537961 | poorly differentiated adenocarcinoma withsignet ring cell features, stomach | .a | 4084 to 4372 | 317 to 29 | AAA | 289/289 (100 %) | 14 diff (95.2 %id) | ||
AI913137 | Kidney | .a | 4067 to 4373 | 307 to 1 | 307/307 (100 %) | 0 diff (100 %id) | |||
AI695437 | colon | .a | 4158 to 4372 | 229 to 15 | AAA | 215/216 (99 %) | 3 diff (98.7 %id) | ||
AI765567 | 2 pooled tumors (clear cell type), Kidney | .a | 4147 to 4373 | 230 to 3 | 228/230 (99 %) | 0 diff (100 %id) | |||
AW021773 | cochlea, ear | .a | 3893 to 4245 | 8 to 360 | 353/360 (98 %) | 6 diff (98.4 %id) | |||
AW117192 | pooled | .a | 3952 to 4371 | 424 to 5 | 420/424 (99 %) | 0 diff (100 %id) | |||
AW247926 | lung, small cell carcinoma | .e | 3206 to 3526 | 333 to 11 | AAA | 323/323 (100 %) | 3 diff (99.1 %id) | ||
AW248352 | lung, small cell carcinoma | .e | 2740 to 3171 | 10 to 441 | 432/441 (97 %) | 0 diff (100 %id) | |||
AW249168 | lung, small cell carcinoma | .e | 2730 to 3254 | 1 to 525 | 525/525 (100 %) | 7 diff (98.7 %id) | |||
AW410139 | muscle, rhabdomyosarcoma | .f | 1 to 524 | 13 to 537 | tiling clone, | 529/537 (98 %) | 6 diff (98.9 %id) | ||
AW410140 | muscle, rhabdomyosarcoma | .f | 1022 to 1570 | 573 to 25 | AAA | 549/549 (100 %) | 0 diff (100 %id) | ||
AW410546 | muscle, rhabdomyosarcoma | .e | 1931 to 2358 | 1 to 428 | 428/428 (100 %) | 3 diff (99.3 %id) | |||
AW410547 | muscle, rhabdomyosarcoma | .e | 2959 to 3526 | 588 to 21 | AAA | 568/568 (100 %) | 0 diff (100 %id) | ||
AW411394 | muscle, rhabdomyosarcoma | .e | 1911 to 2498 | 1 to 587 | 587/587 (100 %) | 5 diff (99.2 %id) | |||
AW411395 | muscle, rhabdomyosarcoma | .e | 3106 to 3520 | 458 to 44 | AAA | 415/415 (100 %) | 13 diff (96.9 %id) | ||
AW663959 | pooled | .e | 2937 to 3525 | 593 to 5 | 589/596 (98 %) | 15 diff (97.5 %id) | |||
BE205994 | muscle, rhabdomyosarcoma | .e | 3042 to 3532 | 494 to 4 | 491/494 (99 %) | 0 diff (100 %id) | |||
BE299180 | muscle, rhabdomyosarcoma | .f | 15 to 706 | 20 to 706 | 687/757 (90 %) | 17 diff (97.8 %id) | |||
BE298550 | muscle, rhabdomyosarcoma | .f | 42 to 690 | 1 to 652 | 652/790 (82 %) | 11 diff (98.7 %id) | |||
AW407611. matches multiple genes | lymph | .a | 1540 to 1991 | 1 to 452 | also hits gene ATP2A3 | 452/452 (100 %) | 5 diff (98.9 %id) | ||
CF136080 | lymph | .e | 27 to 268 | 1 to 242 | 242/242 (100 %) | 13 diff (94.7 %id) | |||
BE220783 | malignant melanoma, metastatic to lymphnode, skin | .a | 3958 to 4373 | 417 to 2 | 416/417 (99 %) | 0 diff (100 %id) | |||
BE501507 | Kidney | .a | 4067 to 4373 | 307 to 1 | 307/307 (100 %) | 1 diff (99.7 %id) | |||
BF438872 | pooled | .a | 4013 to 4373 | 366 to 6 | 361/366 (98 %) | 0 diff (100 %id) | |||
BC008143 | Placenta, choriocarcinoma | .a | 3186 to 4367 | 1 to 1181 | available from MGC, AAA | 1181/1181 (100 %) | 1 diff (100.0 %id) | ||
BE536619 | cervix | .a | 3207 to 3675 | 1 to 471 | available from MGC, | 471/663 (71 %) | 14 diff (97.9 %id) | ||
BF108911 | pooled | .e | 3033 to 3532 | 503 to 4 | 500/503 (99 %) | 2 diff (99.7 %id) | |||
BE295642 | muscle, rhabdomyosarcoma | .e | 1940 to 2503 | 1 to 587 | 587/587 (100 %) | 62 diff (89.5 %id) | |||
BE294470 | muscle, rhabdomyosarcoma | .e | 1916 to 2528 | 1 to 613 | 613/613 (100 %) | 1 diff (99.9 %id) | |||
BE295359 | muscle, rhabdomyosarcoma | .f | 25 to 729 | 1 to 705 | 705/705 (100 %) | 9 diff (98.8 %id) | |||
BE295569 | muscle, rhabdomyosarcoma | .f | 29 to 654 | 1 to 624 | 624/624 (100 %) | 8 diff (98.8 %id) | |||
BE296948 | muscle, rhabdomyosarcoma | .e | 1940 to 2537 | 1 to 598 | 598/599 (99 %) | 2 diff (99.7 %id) | |||
BE968851 | heart | .a | 3869 to 4304 | 1 to 436 | 436/768 (56 %) | 11 diff (98.6 %id) | |||
BF205376 | muscle, rhabdomyosarcoma | .e | 1900 to 2510 | 1 to 606 | 606/971 (62 %) | 13 diff (98.7 %id) | |||
BF304643 | muscle, rhabdomyosarcoma | .k | 25 to 760 | 1 to 724 | tiling clone, | 726/926 (78 %) | 21 diff (97.8 %id) | ||
BF305544 | muscle, rhabdomyosarcoma | .e | 1920 to 2678 | 1 to 754 | 752/754 (99 %) | 21 diff (97.3 %id) | |||
BF310775 | brain, neuroblastoma | .e | 1911 to 2508 | 1 to 600 | 600/919 (65 %) | 19 diff (98.0 %id) | |||
BF308707 | muscle, rhabdomyosarcoma | .e | 1920 to 2592 | 1 to 671 | 671/773 (86 %) | 14 diff (98.2 %id) | |||
BF306974 | muscle, rhabdomyosarcoma | .e | 1920 to 2649 | 1 to 722 | 722/905 (79 %) | 21 diff (97.7 %id) | |||
BF309526 | muscle, rhabdomyosarcoma | .e | 1896 to 2592 | 1 to 700 | 700/1192 (58 %) | 11 diff (99.1 %id) | |||
BF307486 | muscle, rhabdomyosarcoma | .e | 1892 to 2646 | 1 to 757 | 757/789 (95 %) | 27 diff (96.6 %id) | |||
BG152380 | brain, glioblastoma without EGFR amplification | .a | 4012 to 4373 | 362 to 1 | 362/362 (100 %) | 0 diff (100 %id) | |||
BG059228 | nasopharynx, normal epithelium | .t-u | 1 to 453 | 1 to 453 | exact | tiling clone, | 453/453 (100 %) | 0 diff (100 %id) | |
BG393357 | embryonal carcinoma, cell line, testis | .a | 2004 to 2588 | 1 to 593 | 593/593 (100 %) | 21 diff (96.5 %id) | |||
BG825379 | muscle, rhabdomyosarcoma | .j | 11 to 894 | 1 to 889 | E105A K106E V107G G108R F109I ... | tiling clone, | 889/902 (98 %) | 20 diff (97.8 %id) | |
BG827112 | muscle, rhabdomyosarcoma | .e | 1896 to 2303 | 1 to 410 | 410/878 (46 %) | 11 diff (98.8 %id) | |||
BG826647 | muscle, rhabdomyosarcoma | .e | 1892 to 2579 | 1 to 687 | 687/687 (100 %) | 13 diff (98.2 %id) | |||
BG827109 | muscle, rhabdomyosarcoma | .e | 1920 to 2406 | 1 to 487 | 487/487 (100 %) | 2 diff (99.6 %id) | |||
BG825496 | muscle, rhabdomyosarcoma | .e | 1897 to 2273 | 1 to 377 | 377/1005 (37 %) | 2 diff (99.9 %id) | |||
BG826805 | muscle, rhabdomyosarcoma | .e | 2504 to 2953 | 228 to 686 | 462/687 (67 %) | 15 diff (97.9 %id) | |||
BG828884 | muscle, rhabdomyosarcoma | .j | 32 to 952 | 1 to 920 | K44T K54E K87N I88D T89H ... | 920/928 (99 %) | 30 diff (96.8 %id) | ||
BG829317 | muscle, rhabdomyosarcoma | .e | 1898 to 2346 | 1 to 450 | 450/450 (100 %) | 3 diff (99.4 %id) | |||
BG911200 | anaplastic oligodendroglioma with 1p/19qloss, brain | .a | 1424 to 2128 | 1 to 702 | 702/703 (99 %) | 8 diff (98.9 %id) | |||
BI114560 | muscle, rhabdomyosarcoma | .e | 1900 to 2307 | 1 to 409 | 409/619 (66 %) | 8 diff (98.8 %id) | |||
BI114108 | muscle, rhabdomyosarcoma | .k | 24 to 529 | 1 to 521 | 521/576 (90 %) | 28 diff (95.2 %id) | |||
BI114994 | muscle, rhabdomyosarcoma | .e | 1897 to 2506 | 1 to 617 | 617/621 (99 %) | 24 diff (96.2 %id) | |||
BI523535 | brain | .h | 1 to 802 | 29 to 834 | P14L F15S Q16S Q17N M19C ... | tiling clone, | 812/834 (97 %) | 10 diff (98.9 %id) | |
BM127912 | Islets of Langerhans, Pancreas | .a | 4061 to 4378 | 318 to 1 | fully sequenced, | 318/318 (100 %) | 4 diff (98.8 %id) | ||
BM128220 | Islets of Langerhans, Pancreas | .a | 3760 to 4091 | 1 to 332 | fully sequenced, | 332/332 (100 %) | 2 diff (99.4 %id) | ||
BM127919 | Islets of Langerhans, Pancreas | .a | 4092 to 4378 | 287 to 1 | fully sequenced, | 287/287 (100 %) | 6 diff (98.0 %id) | ||
BM128228 | Islets of Langerhans, Pancreas | .a | 3761 to 4122 | 1 to 361 | fully sequenced, | 361/361 (100 %) | 3 diff (99.2 %id) | ||
BM128419 | Islets of Langerhans, Pancreas | .a | 3791 to 4373 | 588 to 6 | tiling clone, | 583/588 (99 %) | 0 diff (100 %id) | ||
BM128657 | Islets of Langerhans, Pancreas | .a | 3759 to 4311 | 1 to 553 | 553/553 (100 %) | 0 diff (100 %id) | |||
CK819361 | Islets of Langerhans, Pancreas | .a | 3818 to 4373 | 561 to 6 | 556/561 (99 %) | 0 diff (100 %id) | |||
CK819362 | Islets of Langerhans, Pancreas | .a | 3745 to 4282 | 1 to 538 | 538/538 (100 %) | 6 diff (98.9 %id) | |||
BM919732 | pooled pancreas and spleen | .d | 59 to 941 | 11 to 902 | tiling clone, | 892/1021 (87 %) | 23 diff (97.8 %id) | ||
BM989870 | lung, Lung Focal Fibrosis | .a | 3795 to 4372 | 596 to 19 | AAA | 578/578 (100 %) | 18 diff (96.9 %id) | ||
BU533357 | mixed (pool of 40 RNAs) | .a | 1993 to 2418 | 1 to 426 | 426/658 (64 %) | 6 diff (99.1 %id) | |||
CD243515 | testis | .p | 1 to 738 | 30 to 770 | S83T S91F P92S A93S P94N ... | tiling clone, | 741/883 (83 %) | 16 diff (98.2 %id) | |
CD243596 | testis | .p | 1 to 713 | 27 to 744 | tiling clone, | 718/887 (80 %) | 15 diff (98.4 %id) | ||
CD358195 | testis | .s | 1 to 406 | 1 to 409 | R56G L75P L76A M77H A78G ... | tiling clone, | 595/969 (61 %) | 30 diff (97.0 %id) | |
CD514485 | White Matter | .a | 2425 to 3224 | 1 to 807 | 807/808 (99 %) | 19 diff (97.7 %id) | |||
TI_44185096 | .h | 1 to 802 | 29 to 834 | P14L F15S Q16S Q17N M19C ... | 812/834 (97 %) | 10 diff (98.9 %id) | |||
CB164760 | Liver | .a | 3605 to 4079 | 5 to 483 | 479/483 (99 %) | 10 diff (98.0 %id) | |||
NM_014925.3 | .b | 357 to 4330 | 1 to 3974 | RefSeq, | 3974/3974 (100 %) | 0 diff (100 %id) | |||
NM_145064.1 | .e | 1884 to 3526 | 1 to 1643 | RefSeq, | 1643/1643 (100 %) | 0 diff (100 %id) | |||
CD723306 | eye, lacrimal gland | .a | 56 to 357 | 1 to 302 | 302/595 (50 %) | 1 diff (99.9 %id) | |||
DA820605 | pericardium | .n | 1 to 550 | 2 to 551 | M40V | tiling clone, capped | 550/550 (100 %) | 1 diff (99.9 %id) | |
DA821349 | pericardium | .e | 1926 to 2458 | 2 to 534 | capped | 533/533 (100 %) | 0 diff (100 %id) | ||
DA823395 | pericardium | .e | 1884 to 2438 | 2 to 556 | capped | 555/555 (100 %) | 0 diff (100 %id) | ||
DA823469 | pericardium | .e | 1884 to 2365 | 2 to 483 | capped | 482/482 (100 %) | 1 diff (99.8 %id) | ||
DA824066 | pericardium | .k | 1 to 560 | 8 to 567 | capped | 566/566 (100 %) | 3 diff (99.5 %id) | ||
DA824539 | pericardium | .e | 1915 to 2481 | 2 to 568 | capped | 567/567 (100 %) | 0 diff (100 %id) | ||
DA824844 | pericardium | .e | 1885 to 2450 | 2 to 567 | capped | 566/566 (100 %) | 1 diff (99.9 %id) | ||
DA827878 | pericardium | .e | 1884 to 2458 | 2 to 576 | capped | 575/575 (100 %) | 0 diff (100 %id) | ||
CR990085 | T-Lymphocytes | .a | 2045 to 2840 | 1 to 797 | 797/797 (100 %) | 1 diff (99.9 %id) | |||
F32305 | pectoral muscle (after mastectomy) | .e | 3181 to 3515 | 1 to 335 | 335/335 (100 %) | 14 diff (95.9 %id) | |||
F33460 | pectoral muscle (after mastectomy) | .e | 3279 to 3521 | 1 to 243 | 243/243 (100 %) | 11 diff (95.5 %id) | |||
F31205 | pectoral muscle (after mastectomy) | .f | 1246 to 1417 | 1 to 172 | 172/172 (100 %) | 0 diff (100 %id) | |||
TI_1948105409 | .e | 2196 to 2712 | 134 to 650 | fully sequenced, | 517/650 (79 %) | 6 diff (99.1 %id) | |||
TI_1948105410 | .e | 2651 to 3172 | 650 to 129 | fully sequenced, | 522/650 (80 %) | 0 diff (100 %id) | |||
TI_1948105589 | .e | 2196 to 2712 | 135 to 651 | fully sequenced, | 517/651 (79 %) | 6 diff (99.1 %id) | |||
TI_1948105590 | .e | 2651 to 3172 | 649 to 128 | fully sequenced, | 522/649 (80 %) | 0 diff (100 %id) | |||
TI_1948121233 | .e | 2196 to 2712 | 129 to 645 | fully sequenced, | 517/645 (80 %) | 6 diff (99.1 %id) | |||
TI_1948121234 | .e | 2651 to 3172 | 654 to 133 | fully sequenced, | 522/654 (79 %) | 0 diff (100 %id) | |||
TI_1948121414 | .e | 2196 to 2712 | 131 to 647 | fully sequenced, | 517/647 (79 %) | 6 diff (99.1 %id) | |||
TI_1948121415 | .e | 2651 to 3172 | 650 to 129 | fully sequenced, | 522/650 (80 %) | 0 diff (100 %id) | |||
DA893898 | skeletal muscle | .e | 1924 to 2488 | 2 to 566 | capped | 565/569 (99 %) | 2 diff (99.7 %id) | ||
DA894073 | skeletal muscle | .e | 1885 to 2357 | 2 to 474 | capped | 473/473 (100 %) | 0 diff (100 %id) | ||
DA894082 | skeletal muscle | .e | 1925 to 2433 | 2 to 510 | capped | 509/509 (100 %) | 0 diff (100 %id) | ||
DA894376 | skeletal muscle | .e | 1885 to 2443 | 2 to 559 | capped | 558/558 (100 %) | 1 diff (99.9 %id) | ||
DB330974 | skeletal muscle | .e | 3058 to 3526 | 469 to 1 | 469/469 (100 %) | 0 diff (100 %id) | |||
DA894663 | skeletal muscle | .e | 1885 to 2282 | 2 to 399 | capped | 398/398 (100 %) | 1 diff (99.8 %id) | ||
DC385601 | skeletal muscle | .m | 1 to 555 | 7 to 561 | 561/561 (100 %) | 2 diff (99.7 %id) | |||
DC385603 | skeletal muscle | .j | 1 to 502 | 1 to 502 | 502/502 (100 %) | 1 diff (99.9 %id) | |||
DA895009 | skeletal muscle | .k | -9 to 492 | 2 to 503 | tiling clone, capped | 502/502 (100 %) | 1 diff (99.9 %id) | ||
DC385614 | skeletal muscle | .j | 1 to 545 | 1 to 545 | tiling clone, | 545/545 (100 %) | 0 diff (100 %id) | ||
DA895347 | skeletal muscle | .e | 1926 to 2477 | 2 to 552 | capped | 551/551 (100 %) | 1 diff (99.9 %id) | ||
DA896169 | skeletal muscle | .e | 1958 to 2522 | 2 to 566 | capped | 565/565 (100 %) | 0 diff (100 %id) | ||
DA896191 | skeletal muscle | .e | 1885 to 2371 | 2 to 488 | capped | 487/487 (100 %) | 0 diff (100 %id) | ||
DA896271 | skeletal muscle | .e | 1885 to 2169 | 2 to 286 | capped | 285/285 (100 %) | 0 diff (100 %id) | ||
DA896547 | skeletal muscle | .e | 1884 to 2435 | 2 to 553 | capped | 552/552 (100 %) | 0 diff (100 %id) | ||
DA896603 | skeletal muscle | .e | 1885 to 2432 | 2 to 549 | capped | 548/548 (100 %) | 1 diff (99.9 %id) | ||
DA896836 | skeletal muscle | .e | 1878 to 2432 | 2 to 556 | capped | 555/557 (99 %) | 1 diff (99.9 %id) | ||
DC385740 | skeletal muscle | .j | 64 to 550 | 1 to 487 | 487/487 (100 %) | 0 diff (100 %id) | |||
DA897639 | skeletal muscle | .e | 1884 to 2425 | 2 to 543 | capped | 542/542 (100 %) | 1 diff (99.9 %id) | ||
DA897811 | skeletal muscle | .e | 1885 to 2433 | 2 to 550 | capped | 549/549 (100 %) | 2 diff (99.7 %id) | ||
DA899053 | skeletal muscle | .e | 1884 to 2287 | 2 to 405 | capped | 404/404 (100 %) | 0 diff (100 %id) | ||
DA899341 | skeletal muscle | .e | 1884 to 2433 | 2 to 551 | capped | 550/550 (100 %) | 0 diff (100 %id) | ||
DA899439 | skeletal muscle | .e | 1890 to 2433 | 2 to 545 | capped | 544/544 (100 %) | 0 diff (100 %id) | ||
DA899675 | skeletal muscle | .e | 1884 to 2315 | 2 to 433 | capped | 432/432 (100 %) | 0 diff (100 %id) | ||
DA899717 | skeletal muscle | .e | 1925 to 2485 | 2 to 562 | capped | 561/561 (100 %) | 0 diff (100 %id) | ||
DA900217 | skeletal muscle | .e | 1884 to 2126 | 2 to 244 | capped | 243/243 (100 %) | 2 diff (99.2 %id) | ||
DA900305 | skeletal muscle | .e | 1886 to 2270 | 2 to 386 | capped | 385/385 (100 %) | 0 diff (100 %id) | ||
DA900308 | skeletal muscle | .e | 1885 to 2374 | 2 to 491 | capped | 490/490 (100 %) | 1 diff (99.8 %id) | ||
DA900506 | skeletal muscle | .e | 1884 to 2341 | 2 to 459 | capped | 458/458 (100 %) | 1 diff (99.8 %id) | ||
DA952191 | Spleen | .g | 132 to 618 | 2 to 489 | tiling clone, capped | 488/488 (100 %) | 3 diff (99.4 %id) | ||
DN995943 | breast cancer, Mammary gland (cancer tissue) | .g | 1 to 595 | 9 to 603 | tiling clone, | 595/603 (98 %) | 6 diff (99.1 %id) | ||
DB062770 | testis | .o | 1 to 542 | 2 to 543 | exact | tiling clone, capped | 542/542 (100 %) | 0 diff (100 %id) | |
DB092553 | testis | .l | 321 to 874 | 2 to 555 | tiling clone, capped | 554/554 (100 %) | 0 diff (100 %id) | ||
TI_149271196 | .a | 3615 to 4372 | 841 to 85 | AAA | 757/988 (76 %) | 2 diff (99.8 %id) | |||
TI_154146146 | .a | 1547 to 2268 | 77 to 806 | 730/826 (88 %) | 47 diff (94.4 %id) | ||||
TI_154147202 | .a | 1547 to 2180 | 84 to 717 | 634/634 (100 %) | 7 diff (98.9 %id) | ||||
TI_227712532 | .e | 2578 to 3526 | 1011 to 82 | AAA | 930/995 (93 %) | 30 diff (97.0 %id) | |||
TI_227713815 | .e | 2753 to 3526 | 866 to 93 | AAA | 774/1004 (77 %) | 4 diff (99.7 %id) | |||
BU674268 | lung, Primary Lung Epithelial Cells | .a | 3739 to 4372 | 652 to 19 | AAA | 634/634 (100 %) | 0 diff (100 %id) | ||
BM709711 | eye, Retina Foveal and Macular | .a | 3990 to 4329 | 1 to 339 | 339/339 (100 %) | 3 diff (99.2 %id) | |||
BM703403 | eye, human retina | .a | 1908 to 2297 | 1 to 390 | fully sequenced, | 390/390 (100 %) | 0 diff (100 %id) | ||
BU729336 | eye, human retina | .a | 2236 to 2497 | 286 to 25 | fully sequenced, | 262/286 (91 %) | 0 diff (100 %id) | ||
BM713044 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .k | 48 to 429 | 1 to 382 | 382/382 (100 %) | 1 diff (99.8 %id) | |||
BM716925 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .k | 48 to 795 | 1 to 743 | P145H P146L G147V F148S H149I ... | tiling clone, | 743/757 (98 %) | 10 diff (98.7 %id) | |
BU738507 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .e | 2863 to 3528 | 681 to 17 | tiling clone, AAA | 665/665 (100 %) | 3 diff (99.6 %id) | ||
BM727862 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .a | 1908 to 2502 | 1 to 593 | Internal priming: the 3' end of the oligo dT primed clone lies in the CDS | 593/593 (100 %) | 7 diff (98.9 %id) | ||
CA429753 | Cell Line, Chondrosarcoma | .a | 3717 to 4372 | 673 to 19 | AAA | 655/655 (100 %) | 1 diff (99.9 %id) | ||
CD370774 | Alveolar Macrophage, lung | .e | 2837 to 3526 | 707 to 19 | AAA | 689/689 (100 %) | 2 diff (99.8 %id) | ||
CD364582 | Alveolar Macrophage, lung | .e | 2755 to 3526 | 790 to 19 | AAA | 772/772 (100 %) | 4 diff (99.5 %id) | ||
CD367060 | Alveolar Macrophage, lung | .e | 2788 to 3526 | 755 to 19 | AAA | 737/737 (100 %) | 4 diff (99.5 %id) | ||
X85326 | .a | 1571 to 1742 | 1 to 171 | 171/195 (87 %) | 10 diff (94.9 %id) | ||||
BE835156 | prostate_normal | .e | 3279 to 3521 | 1 to 243 | This clone was ignored | 243/243 (100 %) | 11 diff (95.5 %id) | ||
BE835158 | prostate_normal | .f | 1246 to 1417 | 1 to 172 | This clone was ignored | 172/172 (100 %) | 0 diff (100 %id) | ||
AA628425 | .e | 2196 to 2712 | 134 to 650 | Suspected internal deletion, this clone was ignored | 517/650 (79 %) | 6 diff (99.1 %id) | |||
BE019393 | muscle, rhabdomyosarcoma | .e | 2651 to 3172 | 650 to 129 | Suspected internal deletion, this clone was ignored | 522/650 (80 %) | 0 diff (100 %id) | ||
BE205917 | muscle, rhabdomyosarcoma | .e | 2196 to 2712 | 135 to 651 | Suspected internal deletion, this clone was ignored | 517/651 (79 %) | 6 diff (99.1 %id) | ||
BF002301 | colon, colon tumor, RER+ | .e | 2651 to 3172 | 649 to 128 | Suspected internal deletion, this clone was ignored | 522/649 (80 %) | 0 diff (100 %id) | ||
BI465259 | testis | .e | 2196 to 2712 | 129 to 645 | This clone was ignored | 517/645 (80 %) | 6 diff (99.1 %id) | ||
DA896798 | skeletal muscle | .e | 2651 to 3172 | 654 to 133 | capped | Suspected internal deletion, this clone was ignored | 522/654 (79 %) | 0 diff (100 %id) | |
TI_1948121414 | .e | 2196 to 2712 | 131 to 647 | fully sequenced, | 517/647 (79 %) | 6 diff (99.1 %id) | |||
TI_1948121415 | .e | 2651 to 3172 | 650 to 129 | fully sequenced, | 522/650 (80 %) | 0 diff (100 %id) | |||
DA893898 | skeletal muscle | .e | 1924 to 2488 | 2 to 566 | capped | 565/569 (99 %) | 2 diff (99.7 %id) | ||
DA894073 | skeletal muscle | .e | 1885 to 2357 | 2 to 474 | capped | 473/473 (100 %) | 0 diff (100 %id) | ||
DA894082 | skeletal muscle | .e | 1925 to 2433 | 2 to 510 | capped | 509/509 (100 %) | 0 diff (100 %id) | ||
DA894376 | skeletal muscle | .e | 1885 to 2443 | 2 to 559 | capped | 558/558 (100 %) | 1 diff (99.9 %id) | ||
DB330974 | skeletal muscle | .e | 3058 to 3526 | 469 to 1 | 469/469 (100 %) | 0 diff (100 %id) | |||
DA894663 | skeletal muscle | .e | 1885 to 2282 | 2 to 399 | capped | 398/398 (100 %) | 1 diff (99.8 %id) | ||
DC385601 | skeletal muscle | .m | 1 to 555 | 7 to 561 | 561/561 (100 %) | 2 diff (99.7 %id) | |||
DC385603 | skeletal muscle | .j | 1 to 502 | 1 to 502 | 502/502 (100 %) | 1 diff (99.9 %id) | |||
DA895009 | skeletal muscle | .k | -9 to 492 | 2 to 503 | tiling clone, capped | 502/502 (100 %) | 1 diff (99.9 %id) | ||
DC385614 | skeletal muscle | .j | 1 to 545 | 1 to 545 | tiling clone, | 545/545 (100 %) | 0 diff (100 %id) | ||
DA895347 | skeletal muscle | .e | 1926 to 2477 | 2 to 552 | capped | 551/551 (100 %) | 1 diff (99.9 %id) | ||
DA896169 | skeletal muscle | .e | 1958 to 2522 | 2 to 566 | capped | 565/565 (100 %) | 0 diff (100 %id) | ||
DA896191 | skeletal muscle | .e | 1885 to 2371 | 2 to 488 | capped | 487/487 (100 %) | 0 diff (100 %id) | ||
DA896271 | skeletal muscle | .e | 1885 to 2169 | 2 to 286 | capped | 285/285 (100 %) | 0 diff (100 %id) | ||
DA896547 | skeletal muscle | .e | 1884 to 2435 | 2 to 553 | capped | 552/552 (100 %) | 0 diff (100 %id) | ||
DA896603 | skeletal muscle | .e | 1885 to 2432 | 2 to 549 | capped | 548/548 (100 %) | 1 diff (99.9 %id) | ||
DA896836 | skeletal muscle | .e | 1878 to 2432 | 2 to 556 | capped | 555/557 (99 %) | 1 diff (99.9 %id) | ||
DC385740 | skeletal muscle | .j | 64 to 550 | 1 to 487 | 487/487 (100 %) | 0 diff (100 %id) | |||
DA897639 | skeletal muscle | .e | 1884 to 2425 | 2 to 543 | capped | 542/542 (100 %) | 1 diff (99.9 %id) | ||
DA897811 | skeletal muscle | .e | 1885 to 2433 | 2 to 550 | capped | 549/549 (100 %) | 2 diff (99.7 %id) | ||
DA899053 | skeletal muscle | .e | 1884 to 2287 | 2 to 405 | capped | 404/404 (100 %) | 0 diff (100 %id) | ||
DA899341 | skeletal muscle | .e | 1884 to 2433 | 2 to 551 | capped | 550/550 (100 %) | 0 diff (100 %id) | ||
DA899439 | skeletal muscle | .e | 1890 to 2433 | 2 to 545 | capped | 544/544 (100 %) | 0 diff (100 %id) | ||
DA899675 | skeletal muscle | .e | 1884 to 2315 | 2 to 433 | capped | 432/432 (100 %) | 0 diff (100 %id) | ||
DA899717 | skeletal muscle | .e | 1925 to 2485 | 2 to 562 | capped | 561/561 (100 %) | 0 diff (100 %id) | ||
DA900217 | skeletal muscle | .e | 1884 to 2126 | 2 to 244 | capped | 243/243 (100 %) | 2 diff (99.2 %id) | ||
DA900305 | skeletal muscle | .e | 1886 to 2270 | 2 to 386 | capped | 385/385 (100 %) | 0 diff (100 %id) | ||
DA900308 | skeletal muscle | .e | 1885 to 2374 | 2 to 491 | capped | 490/490 (100 %) | 1 diff (99.8 %id) | ||
DA900506 | skeletal muscle | .e | 1884 to 2341 | 2 to 459 | capped | 458/458 (100 %) | 1 diff (99.8 %id) | ||
DA952191 | Spleen | .g | 132 to 618 | 2 to 489 | tiling clone, capped | 488/488 (100 %) | 3 diff (99.4 %id) | ||
DN995943 | breast cancer, Mammary gland (cancer tissue) | .g | 1 to 595 | 9 to 603 | tiling clone, | 595/603 (98 %) | 6 diff (99.1 %id) | ||
DN995943 | breast cancer, Mammary gland (cancer tissue) | .g | 1 to 595 | 9 to 603 | tiling clone, | 595/603 (98 %) | 6 diff (99.1 %id) | ||
DB062770 | testis | .o | 1 to 542 | 2 to 543 | exact | tiling clone, capped | 542/542 (100 %) | 0 diff (100 %id) | |
DB092553 | testis | .l | 321 to 874 | 2 to 555 | tiling clone, capped | 554/554 (100 %) | 0 diff (100 %id) | ||
TI_149271196 | .a | 3615 to 4372 | 841 to 85 | AAA | 757/988 (76 %) | 2 diff (99.8 %id) | |||
TI_154146146 | .a | 1547 to 2268 | 77 to 806 | 730/826 (88 %) | 47 diff (94.4 %id) | ||||
TI_154147202 | .a | 1547 to 2180 | 84 to 717 | 634/634 (100 %) | 7 diff (98.9 %id) | ||||
TI_227712532 | .e | 2578 to 3526 | 1011 to 82 | AAA | 930/995 (93 %) | 30 diff (97.0 %id) | |||
TI_227713815 | .e | 2753 to 3526 | 866 to 93 | AAA | 774/1004 (77 %) | 4 diff (99.7 %id) | |||
BU674268 | lung, Primary Lung Epithelial Cells | .a | 3739 to 4372 | 652 to 19 | AAA | 634/634 (100 %) | 0 diff (100 %id) | ||
BU674268 | lung, Primary Lung Epithelial Cells | .a | 3739 to 4372 | 652 to 19 | AAA | 634/634 (100 %) | 0 diff (100 %id) | ||
BM709711 | eye, Retina Foveal and Macular | .a | 3990 to 4329 | 1 to 339 | 339/339 (100 %) | 3 diff (99.2 %id) | |||
BM709711 | eye, Retina Foveal and Macular | .a | 3990 to 4329 | 1 to 339 | 339/339 (100 %) | 3 diff (99.2 %id) | |||
BM703403 | eye, human retina | .a | 1908 to 2297 | 1 to 390 | fully sequenced, | 390/390 (100 %) | 0 diff (100 %id) | ||
BM703403 | eye, human retina | .a | 1908 to 2297 | 1 to 390 | fully sequenced, | 390/390 (100 %) | 0 diff (100 %id) | ||
BU729336 | eye, human retina | .a | 2236 to 2497 | 286 to 25 | fully sequenced, | 262/286 (91 %) | 0 diff (100 %id) | ||
BU729336 | eye, human retina | .a | 2236 to 2497 | 286 to 25 | fully sequenced, | 262/286 (91 %) | 0 diff (100 %id) | ||
BM713044 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .k | 48 to 429 | 1 to 382 | 382/382 (100 %) | 1 diff (99.8 %id) | |||
BM713044 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .k | 48 to 429 | 1 to 382 | 382/382 (100 %) | 1 diff (99.8 %id) | |||
BM716925 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .k | 48 to 795 | 1 to 743 | P145H P146L G147V F148S H149I ... | tiling clone, | 743/757 (98 %) | 10 diff (98.7 %id) | |
BM716925 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .k | 48 to 795 | 1 to 743 | P145H P146L G147V F148S H149I ... | tiling clone, | 743/757 (98 %) | 10 diff (98.7 %id) | |
BU738507 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .e | 2863 to 3528 | 681 to 17 | tiling clone, AAA | 665/665 (100 %) | 3 diff (99.6 %id) | ||
BU738507 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .e | 2863 to 3528 | 681 to 17 | tiling clone, AAA | 665/665 (100 %) | 3 diff (99.6 %id) | ||
BM727862 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .a | 1908 to 2502 | 1 to 593 | Internal priming: the 3' end of the oligo dT primed clone lies in the CDS | 593/593 (100 %) | 7 diff (98.9 %id) | ||
BM727862 | eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid | .a | 1908 to 2502 | 1 to 593 | Internal priming: the 3' end of the oligo dT primed clone lies in the CDS | 593/593 (100 %) | 7 diff (98.9 %id) | ||
CA429753 | Cell Line, Chondrosarcoma | .a | 3717 to 4372 | 673 to 19 | AAA | 655/655 (100 %) | 1 diff (99.9 %id) | ||
CA429753 | Cell Line, Chondrosarcoma | .a | 3717 to 4372 | 673 to 19 | AAA | 655/655 (100 %) | 1 diff (99.9 %id) | ||
CD370774 | Alveolar Macrophage, lung | .e | 2837 to 3526 | 707 to 19 | AAA | 689/689 (100 %) | 2 diff (99.8 %id) | ||
CD370774 | Alveolar Macrophage, lung | .e | 2837 to 3526 | 707 to 19 | AAA | 689/689 (100 %) | 2 diff (99.8 %id) | ||
CD364582 | Alveolar Macrophage, lung | .e | 2755 to 3526 | 790 to 19 | AAA | 772/772 (100 %) | 4 diff (99.5 %id) | ||
CD364582 | Alveolar Macrophage, lung | .e | 2755 to 3526 | 790 to 19 | AAA | 772/772 (100 %) | 4 diff (99.5 %id) | ||
CD367060 | Alveolar Macrophage, lung | .e | 2788 to 3526 | 755 to 19 | AAA | 737/737 (100 %) | 4 diff (99.5 %id) | ||
CD367060 | Alveolar Macrophage, lung | .e | 2788 to 3526 | 755 to 19 | AAA | 737/737 (100 %) | 4 diff (99.5 %id) | ||
X85326 | .a | 1571 to 1742 | 1 to 171 | 171/195 (87 %) | 10 diff (94.9 %id) |
? | Gene Summary | Gene on genome | mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r, .s, .t-u, .u, .va-u, .vb-u | Alternative mRNAs features, proteins, introns, exons, sequences | Expression Tissue | Function, regulation, related genes CI |