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Gene FAM169ATABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
123 supporting clones for gene FAM169A back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK290004 hippocampus FAM169A.a 1 to 2432 2 to 2433 R275G tiling clone,   2433/2433
(100 %)
1 diff
(100.0 %id)
DA326879 hippocampus FAM169A.a 1 to 643 2 to 644   capped   643/643
(100 %)
0 diff
(100 %id)
DA194193 amygdala FAM169A.a 18 to 603 2 to 587   capped   586/586
(100 %)
1 diff
(99.9 %id)
AB020695 brain FAM169A.a 48 to 3929 1 to 3882 exact tiling clone, available from KIAA,   3882/3882
(100 %)
0 diff
(100 %id)
NM_015566.1   FAM169A.a 48 to 5989 1 to 5942 exact RefSeq,   5942/5942
(100 %)
0 diff
(100 %id)
DB277716 uterus FAM169A.a 52 to 615 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DB239956 trachea FAM169A.a 439 to 1002 2 to 565   capped   564/573
(98 %)
0 diff
(100 %id)
DB024270 testis FAM169A.b 1 to 519 2 to 520   tiling clone, capped   519/519
(100 %)
0 diff
(100 %id)
DB336321 testis FAM169A.b 1595 to 2161 567 to 1   tiling clone,   567/567
(100 %)
0 diff
(100 %id)
CR936791 retina FAM169A.c 1 to 5985 1 to 5983 exact tiling clone, AAA   5983/5983
(100 %)
7 diff
(99.9 %id)
DN992949 brain, whole brain FAM169A.c 265 to 673 1 to 410   tiling clone,   411/410
(100 %)
6 diff
(98.6 %id)
CD656817 Embryonic Stem cells FAM169A.c 812 to 1555 4 to 743       740/786
(94 %)
14 diff
(98.3 %id)
CN408710 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells FAM169A.c 887 to 1624 1 to 737       737/737
(100 %)
6 diff
(99.2 %id)
DA486361 brain FAM169A.c 960 to 1533 2 to 574   capped   573/573
(100 %)
2 diff
(99.7 %id)
AK022981   FAM169A.c 1047 to 3932 1 to 2886   tiling clone, available from FLJ,   2886/2886
(100 %)
0 diff
(100 %id)
AU128975   FAM169A.c 1048 to 1572 2 to 527   capped   526/526
(100 %)
3 diff
(99.5 %id)
AL133748 amygdala FAM169A.c 1299 to 1948 1 to 650       650/650
(100 %)
0 diff
(100 %id)
BF841430 head_neck FAM169A.c 1300 to 1782 485 to 4     Submitted on the opposite strand 482/485
(99 %)
3 diff
(99.4 %id)
BI519571 leukocyte FAM169A.c 1320 to 2149 837 to 1       837/838
(99 %)
16 diff
(98.1 %id)
TI_44459563   FAM169A.c 1320 to 2149 837 to 1       837/838
(99 %)
16 diff
(98.1 %id)
DB210053 trachea FAM169A.c 1473 to 2033 2 to 562   capped   561/561
(100 %)
2 diff
(99.7 %id)
BI037032 nervous_tumor FAM169A.c 1571 to 1866 1 to 300       300/300
(100 %)
18 diff
(94.0 %id)
AA383194 testis FAM169A.c 1577 to 1903 1 to 327       327/328
(99 %)
2 diff
(99.4 %id)
DA298531 hippocampus FAM169A.c 1581 to 2151 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DA618271   FAM169A.c 1590 to 2170 2 to 586   capped   585/585
(100 %)
5 diff
(99.2 %id)
CA312084 Human Lung Epithelial cells, lung FAM169A.c 1643 to 2197 572 to 19   AAA   554/563
(98 %)
2 diff
(99.7 %id)
CR977367 T-Lymphocytes FAM169A.c 1872 to 2673 1 to 805       805/805
(100 %)
10 diff
(98.8 %id)
DB095169 testis FAM169A.c 1899 to 2490 2 to 594   capped   593/593
(100 %)
1 diff
(99.9 %id)
Z42753 brain, total brain FAM169A.c 1981 to 2304 1 to 325       325/325
(100 %)
1 diff
(99.7 %id)
BX955429   FAM169A.c 2024 to 2441 1 to 419       419/419
(100 %)
2 diff
(99.6 %id)
R18265 whole brain FAM169A.c 2162 to 2558 1 to 402       402/404
(99 %)
21 diff
(94.9 %id)
DA245612 brain FAM169A.c 2231 to 2826 2 to 597   capped   596/596
(100 %)
0 diff
(100 %id)
DA224466 brain FAM169A.c 2250 to 2811 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
BX501369 Liver FAM169A.c 2261 to 2972 1 to 713       713/713
(100 %)
6 diff
(99.2 %id)
DA229509 brain FAM169A.c 2317 to 2862 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
Z45867 brain, total brain FAM169A.c 2341 to 2620 1 to 280       280/280
(100 %)
0 diff
(100 %id)
BX955589   FAM169A.c 2419 to 2810 1 to 395       395/395
(100 %)
4 diff
(99.0 %id)
BM690899 eye, RPE and Choroid FAM169A.c 2656 to 3316 8 to 667     Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 660/667
(98 %)
6 diff
(99.2 %id)
BM691856 eye, human retina FAM169A.c 2664 to 3201 9 to 546     Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 538/546
(98 %)
6 diff
(99.0 %id)
BE972452 testis FAM169A.c 2771 to 3471 1 to 686       686/795
(86 %)
30 diff
(96.3 %id)
BP395207 pancreatic islet FAM169A.c 2830 to 3309 479 to 1       479/482
(99 %)
1 diff
(99.8 %id)
BI827063 brain, medulla FAM169A.c 2930 to 3629 1 to 699   AAA   699/699
(100 %)
4 diff
(99.5 %id)
TI_57173173   FAM169A.c 2930 to 3641 29 to 739   AAA   711/794
(89 %)
8 diff
(99.0 %id)
BE866734 bladder, carcinoma, cell line FAM169A.c 3025 to 3559 1 to 534       534/534
(100 %)
2 diff
(99.7 %id)
TI_149297734   FAM169A.c 3048 to 3951 937 to 46       892/1030
(86 %)
0 diff
(100 %id)
CA772558 Pancreas, Purified pancreatic islet FAM169A.c 3088 to 3428 7 to 348   fully sequenced,   342/348
(98 %)
12 diff
(96.6 %id)
BM982750 lung, Primary Lung Cystic Fibrosis EpithelialCells FAM169A.c 3271 to 3932 680 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 662/662
(100 %)
0 diff
(100 %id)
BU728711 eye, human retina FAM169A.c 3300 to 3932 651 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 633/633
(100 %)
0 diff
(100 %id)
BQ432549 testis FAM169A.c 3323 to 3932 1 to 612       612/649
(94 %)
7 diff
(99.0 %id)
CA433011 mixed FAM169A.c 3361 to 3932 589 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 571/571
(100 %)
2 diff
(99.7 %id)
AU150096   FAM169A.c 3367 to 3932 566 to 1       566/569
(99 %)
10 diff
(98.3 %id)
CA771720 Pancreas, Purified pancreatic islet FAM169A.c 3398 to 3932 535 to 1   fully sequenced,   535/535
(100 %)
9 diff
(98.4 %id)
AU151180   FAM169A.c 3404 to 3932 523 to 1       523/554
(94 %)
10 diff
(98.2 %id)
AI765284 2 pooled tumors (clear cell type), Kidney FAM169A.c 3416 to 3935 521 to 1       521/521
(100 %)
4 diff
(99.3 %id)
BU726376 eye, RPE and Choroid FAM169A.c 3432 to 3932 518 to 18   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 501/501
(100 %)
0 diff
(100 %id)
AA781126   FAM169A.c 3436 to 3935 500 to 1       500/500
(100 %)
1 diff
(99.8 %id)
AI638662 pooled germ cell tumors FAM169A.c 3445 to 3932 488 to 1       488/488
(100 %)
0 diff
(100 %id)
AI651738 pooled germ cell tumors FAM169A.c 3445 to 3932 489 to 1       489/489
(100 %)
0 diff
(100 %id)
AI005260 pooled FAM169A.c 3447 to 3935 489 to 1       489/489
(100 %)
1 diff
(99.8 %id)
AI636078 Kidney FAM169A.c 3452 to 3894 1 to 443     Submitted on the opposite strand 443/443
(100 %)
3 diff
(99.4 %id)
AI376113 uterus FAM169A.c 3453 to 3892 10 to 449     Submitted on the opposite strand 440/449
(97 %)
6 diff
(98.7 %id)
CN408709 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 FAM169A.c 3458 to 3662 1 to 205       205/205
(100 %)
0 diff
(100 %id)
R42245.
matches multiple genes
whole brain FAM169A.c 3544 to 3941 400 to 1     also hits gene DTX4 400/400
(100 %)
3 diff
(99.3 %id)
AI001944   FAM169A.c 3574 to 3935 362 to 1       362/362
(100 %)
0 diff
(100 %id)
AA968586 pooled FAM169A.c 3603 to 3935 333 to 1       333/333
(100 %)
0 diff
(100 %id)
Z38907 brain, total brain FAM169A.c 3622 to 3932 311 to 1       311/316
(98 %)
0 diff
(100 %id)
F04730 brain, total brain FAM169A.c 3638 to 3932 295 to 1       295/295
(100 %)
0 diff
(100 %id)
EB387739 eye, optic nerve FAM169A.c 3659 to 4498 1 to 842       842/842
(100 %)
1 diff
(99.9 %id)
BG115062 duodenal adenocarcinoma, cell line, small intestine FAM169A.c 3715 to 4455 1 to 732       732/924
(79 %)
44 diff
(95.3 %id)
BX494462 Liver FAM169A.c 3832 to 4394 1 to 563   tiling clone,   563/563
(100 %)
2 diff
(99.7 %id)
CB117882 brain FAM169A.c 3976 to 4504 1 to 529       529/529
(100 %)
0 diff
(100 %id)
AL700413 human skeletal muscle FAM169A.c 4016 to 4592 1 to 579       579/579
(100 %)
2 diff
(99.7 %id)
DB272583 uterus FAM169A.c 4079 to 4644 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DA357066 subthalamic nucleus FAM169A.c 4116 to 4678 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
BE172391 head_neck FAM169A.c 4191 to 4321 1 to 131       131/131
(100 %)
2 diff
(98.5 %id)
BC040298 Brain, hippocampus FAM169A.c 4204 to 5985 1 to 1781   available from MGC, AAA   1781/1781
(100 %)
4 diff
(99.8 %id)
BC044766.
matches multiple genes
testis FAM169A.c 4204 to 5985 1 to 1781   available from MGC, AAA also hits gene natey 1781/1781
(100 %)
4 diff
(99.8 %id)
DB462920.
matches multiple genes
hippocampus FAM169A.c 4205 to 4677 1 to 474     also hits gene NSA2 474/474
(100 %)
3 diff
(99.4 %id)
BG703932 brain, hippocampus FAM169A.c 4209 to 5014 10 to 818   available from MGC,   809/826
(97 %)
23 diff
(97.3 %id)
CA397371 eye, RPE/choroid FAM169A.c 4269 to 4813 1 to 545       545/545
(100 %)
0 diff
(100 %id)
BM552069 leiomyosarcoma, uterus FAM169A.c 4269 to 5188 1 to 933   tiling clone,   933/1039
(89 %)
23 diff
(97.8 %id)
CN288498 embryonic stem cells, DMSO-treated H9 cellline FAM169A.c 4415 to 4937 1 to 524       524/524
(100 %)
1 diff
(99.9 %id)
H86164 eye, retina FAM169A.c 4507 to 4891 13 to 400       388/402
(96 %)
5 diff
(98.8 %id)
AA059295 eye, retina FAM169A.c 4507 to 4750 1 to 244       244/244
(100 %)
0 diff
(100 %id)
CB114685 Liver FAM169A.c 4550 to 5130 1 to 581       581/581
(100 %)
0 diff
(100 %id)
BF238440 bone marrow, from chronic myelogenous leukemia FAM169A.c 4646 to 5354 1 to 701       701/855
(81 %)
37 diff
(95.7 %id)
BX488324   FAM169A.c 4699 to 5054 35 to 390       356/390
(91 %)
6 diff
(98.5 %id)
AV747276 Pituitary FAM169A.c 4748 to 5243 10 to 493       484/494
(97 %)
13 diff
(97.4 %id)
BG254350 adenocarcinoma, cell line, Prostate FAM169A.c 4755 to 5424 1 to 686       686/687
(99 %)
24 diff
(96.6 %id)
BF341121 brain, glioblastoma with EGFR amplification FAM169A.c 4766 to 5362 1 to 597       597/597
(100 %)
2 diff
(99.7 %id)
CR739017 multiple sclerosis lesions FAM169A.c 4910 to 5608 1 to 699       699/699
(100 %)
0 diff
(100 %id)
N47630 multiple sclerosis lesions FAM169A.c 4990 to 5449 1 to 466       466/477
(97 %)
9 diff
(98.2 %id)
N50602 multiple sclerosis lesions FAM169A.c 4990 to 5321 1 to 335       335/402
(83 %)
5 diff
(98.8 %id)
TI_149301491   FAM169A.c 5035 to 5825 849 to 61   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 789/951
(82 %)
6 diff
(99.4 %id)
BM929652 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid FAM169A.c 5108 to 5826 1 to 717   fully sequenced, Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 717/717
(100 %)
4 diff
(99.5 %id)
BU685168 lung, Primary Lung Cystic Fibrosis EpithelialCells FAM169A.c 5150 to 5825 693 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 675/675
(100 %)
2 diff
(99.8 %id)
BM929460 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid FAM169A.c 5187 to 5826 1 to 640   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 640/640
(100 %)
0 diff
(100 %id)
BX103498 multiple sclerosis lesions FAM169A.c 5246 to 5965 1 to 720   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 720/720
(100 %)
1 diff
(99.9 %id)
AI676175 Prostate FAM169A.c 5278 to 5825 559 to 12   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 548/548
(100 %)
2 diff
(99.7 %id)
N46686 multiple sclerosis lesions FAM169A.c 5334 to 5578 1 to 248   fully sequenced,   248/248
(100 %)
7 diff
(97.2 %id)
N47333 multiple sclerosis lesions FAM169A.c 5453 to 5825 378 to 1       378/378
(100 %)
6 diff
(98.5 %id)
AI439112 Kidney FAM169A.c 5455 to 5990 549 to 14   AAA   536/536
(100 %)
2 diff
(99.7 %id)
BM683603 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid FAM169A.c 5482 to 5825 360 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 342/342
(100 %)
0 diff
(100 %id)
N52136 multiple sclerosis lesions FAM169A.c 5492 to 5990 500 to 1       500/501
(99 %)
2 diff
(99.7 %id)
N57484 multiple sclerosis lesions FAM169A.c 5500 to 5990 489 to 1       489/489
(100 %)
3 diff
(99.4 %id)
BG413389 Kidney FAM169A.c 5501 to 5990 500 to 11   AAA   490/490
(100 %)
1 diff
(99.8 %id)
BM693037 eye, Retina Foveal and Macular FAM169A.c 5505 to 5825 1 to 321   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 321/321
(100 %)
0 diff
(100 %id)
N39242 multiple sclerosis lesions FAM169A.c 5548 to 5990 445 to 1   fully sequenced,   445/445
(100 %)
2 diff
(99.6 %id)
AW168937 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus FAM169A.c 5558 to 5992 441 to 6   tiling clone,   436/441
(98 %)
0 diff
(100 %id)
BQ081914 stomach FAM169A.c 5569 to 5989 1 to 421       421/421
(100 %)
2 diff
(99.6 %id)
H86103 eye, retina FAM169A.c 5629 to 5810 182 to 1       182/182
(100 %)
1 diff
(99.5 %id)
AV731584 hypothalamus FAM169A.c 5675 to 5990 1 to 316   AAA   316/316
(100 %)
0 diff
(100 %id)
BQ640036 eye, retina FAM169A.c 5700 to 5990 29 to 319   AAA   291/319
(91 %)
5 diff
(98.5 %id)
N50548 multiple sclerosis lesions FAM169A.c 5734 to 5990 260 to 1       260/260
(100 %)
11 diff
(95.8 %id)
AI363758 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors FAM169A.c 5839 to 5989 164 to 14   AAA   151/151
(100 %)
12 diff
(92.1 %id)
BX647536 human retina FAM169A.d 1 to 5948 1 to 5949 exact tiling clone, available from DKFZ, AAA   5949/5949
(100 %)
5 diff
(100.0 %id)
DB053878 testis FAM169A.e 1 to 325 2 to 326   tiling clone, capped   325/325
(100 %)
0 diff
(100 %id)
BI518969 leukocyte FAM169A.e 38 to 957 1 to 924       924/1051
(87 %)
28 diff
(97.4 %id)
TI_44459561   FAM169A.e 38 to 957 69 to 992       924/1119
(82 %)
34 diff
(97.0 %id)
DA119094 cerebellum FAM169A.e 106 to 668 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
BX640902 human endometrium FAM169A.e 177 to 5946 1 to 5764 G236D tiling clone, available from DKFZ, AAA   5764/5764
(100 %)
10 diff
(99.9 %id)
CD657611 Embryonic Stem cells FAM169A.f 1 to 807 2 to 804 Q2N W196R T229X E247X V250C ... tiling clone,   803/852
(94 %)
18 diff
(97.9 %id)
DA404933 thalamus FAM169A.g 1 to 563 2 to 564 exact tiling clone, capped   563/563
(100 %)
0 diff
(100 %id)
DA225293 brain FAM169A.h 1 to 569 2 to 571   tiling clone, capped   570/572
(99 %)
2 diff
(99.7 %id)
DA163709 amygdala FAM169A.h 261 to 830 2 to 571   tiling clone, capped   570/570
(100 %)
0 diff
(100 %id)
DB305177 brain FAM169A.h 570 to 1110 541 to 1   tiling clone,   541/541
(100 %)
1 diff
(99.9 %id)
CV573291 cornea, eye FAM169A.i-u 1 to 584 1 to 584   tiling clone,   584/584
(100 %)
0 diff
(100 %id)
CD644217 Embryonic Stem cells FAM169A.i-u 335 to 1100 761 to 2 exact   Submitted on the opposite strand 760/785
(96 %)
0 diff
(100 %id)
CD657770 Embryonic Stem cells FAM169A.i-u 421 to 1227 7 to 812 exact tiling clone,   806/813
(99 %)
15 diff
(98.2 %id)
AA332584 Embryo, 8 weeks FAM169A.i-u 446 to 858 1 to 412 E5X S9X     412/412
(100 %)
6 diff
(98.6 %id)
BP398771 pancreatic islet FAM169A.j-u 1 to 496 496 to 1 exact tiling clone,   496/496
(100 %)
0 diff
(100 %id)
DB326347 brain FAM169A.j-u 134 to 381 1 to 248     Submitted on the opposite strand 248/248
(100 %)
0 diff
(100 %id)
BX457204 thymus Gene FAM169A, variant not shown         Suspected internal deletion, this clone was ignored    
AV661366 corresponding non cancerous liver tissue Gene FAM169A, variant not shown         This clone was ignored    
AV720650 corresponding non cancerous liver tissue Gene FAM169A, variant not shown         This clone was ignored    
AV719250 corresponding non cancerous liver tissue Gene FAM169A, variant not shown         This clone was ignored    
AV661610 corresponding non cancerous liver tissue Gene FAM169A, variant not shown         This clone was ignored    
DA771457 brain Gene FAM169A, variant not shown       capped Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i-u, .j-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C