To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene ATXN1LandKIAA0174TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
763 representative clones for gene ATXN1LandKIAA0174 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DB097328 testis .a 1 to 586 2 to 587   tiling clone, capped   586/586
(100 %)
1 diff
(99.9 %id)
NM_001137675.2   .a 7 to 7882 1 to 7876 exact RefSeq, AAA   7876/7876
(100 %)
0 diff
(100 %id)
BF741450 bocio_tumor .a 64 to 524 36 to 495       460/495
(92 %)
6 diff
(98.8 %id)
CV395115 colon .a 65 to 596 14 to 548   tiling clone,   535/548
(97 %)
25 diff
(95.5 %id)
AA642593 normal prostate, Prostate .a 80 to 501 1 to 421     Submitted on the opposite strand 421/421
(100 %)
6 diff
(98.6 %id)
BX537575 human fetal kidney .a 2184 to 7882 1 to 5699   tiling clone, available from DKFZ, AAA   5699/5699
(100 %)
5 diff
(100.0 %id)
BX537596 human retina .a 2311 to 7882 1 to 5572   tiling clone, available from DKFZ, AAA   5572/5572
(100 %)
4 diff
(100.0 %id)
BF367352 placenta_normal .a 2519 to 3126 612 to 9       604/616
(98 %)
0 diff
(100 %id)
BX471233   .a 2628 to 3042 1 to 415       415/415
(100 %)
2 diff
(99.6 %id)
AW298779   .a 2783 to 3001 1 to 215     Submitted on the opposite strand 215/225
(95 %)
2 diff
(99.2 %id)
DA798300 brain .a 2942 to 3482 2 to 543   capped   542/542
(100 %)
2 diff
(99.7 %id)
BF765667 colon_est .a 3023 to 3546 2 to 522       521/522
(99 %)
6 diff
(98.9 %id)
BF762491 colon_est .a 3026 to 3558 1 to 529       529/529
(100 %)
9 diff
(98.3 %id)
DA706777   .a 3324 to 3900 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
AA393744   .a 3369 to 3809 1 to 440       440/444
(99 %)
3 diff
(99.4 %id)
BX479441   .a 3392 to 3913 1 to 522       522/522
(100 %)
1 diff
(99.9 %id)
AL833385 lymph node .a 3480 to 7881 1 to 4402   available from DKFZ, AAA   4402/4402
(100 %)
3 diff
(100.0 %id)
DA858195 placenta .a 3483 to 4052 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DB061983 testis .a 3484 to 3898 2 to 416   capped   415/415
(100 %)
0 diff
(100 %id)
BI763373 pooled colon, kidney, stomach .a 3545 to 4215 1 to 664       664/664
(100 %)
9 diff
(98.7 %id)
TI_57150040   .a 3546 to 4215 30 to 692       663/692
(95 %)
6 diff
(99.2 %id)
AA435792   .a 3562 to 3922 372 to 13   AAA   360/360
(100 %)
1 diff
(99.8 %id)
CN284971 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 3607 to 3867 1 to 261       261/261
(100 %)
2 diff
(99.3 %id)
DB279502 uterus .a 3708 to 4241 2 to 536   capped   535/535
(100 %)
1 diff
(99.9 %id)
DA315457 hippocampus .a 3750 to 4249 2 to 501   capped   500/500
(100 %)
1 diff
(99.8 %id)
BG773729 choriocarcinoma, placenta .a 3883 to 4488 2 to 610       609/671
(90 %)
36 diff
(94.7 %id)
BE734676 choriocarcinoma, placenta .a 3886 to 4480 58 to 652       595/915
(65 %)
6 diff
(99.4 %id)
BI006964 kidney_tumor .a 3988 to 4289 33 to 334       302/335
(90 %)
13 diff
(96.2 %id)
DA995585 synovial membrane tissue from rheumatioidarthritis .a 4052 to 4627 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
AW993114 breast_normal .a 4214 to 4669 1 to 455       455/455
(100 %)
3 diff
(99.4 %id)
DA644535   .a 4302 to 4890 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
BE794836 lung, small cell carcinoma .a 4311 to 5031 1 to 722       722/722
(100 %)
9 diff
(98.8 %id)
DA860266 placenta .a 4365 to 4909 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA434245 tongue, tumor tissue .a 4376 to 4885 2 to 510   capped   509/509
(100 %)
1 diff
(99.9 %id)
BU176765 eye, retinoblastoma .a 4443 to 5347 1 to 905       905/905
(100 %)
9 diff
(99.1 %id)
BQ310544 breast .a 4527 to 4775 34 to 283       250/283
(88 %)
6 diff
(97.9 %id)
AW893565 nervous_normal .a 4532 to 4784 1 to 248       248/248
(100 %)
10 diff
(96.0 %id)
BX496440 Liver .a 4648 to 5178 1 to 532       532/532
(100 %)
2 diff
(99.7 %id)
DN601989 human embryonic stem cells .a 4651 to 5173 1 to 523       523/523
(100 %)
0 diff
(100 %id)
DA116519 cerebellum .a 4698 to 5285 2 to 589   capped   588/588
(100 %)
4 diff
(99.4 %id)
CD702104 normal nasopharynx .a 4784 to 5387 13 to 616       604/616
(98 %)
6 diff
(99.1 %id)
BY797316 eye .a 4827 to 5405 1 to 579       579/579
(100 %)
2 diff
(99.7 %id)
BI549294 brain, hippocampus .a 4862 to 5476 1 to 618       618/618
(100 %)
7 diff
(98.9 %id)
TI_44167424   .a 4865 to 5638 84 to 863       780/899
(86 %)
25 diff
(97.3 %id)
DA759143   .a 4911 to 5393 2 to 484   capped   483/483
(100 %)
0 diff
(100 %id)
DA304362 hippocampus .a 4981 to 5555 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA374173 thalamus .a 5001 to 5631 2 to 632   capped   631/631
(100 %)
0 diff
(100 %id)
DA441718 tongue, tumor tissue .a 5007 to 5558 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
BG745376 Spleen .a 5023 to 5764 1 to 749       749/749
(100 %)
28 diff
(96.3 %id)
DA652700   .a 5039 to 5628 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
DB078858 testis .a 5060 to 5625 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DB150511 thymus .a 5107 to 5650 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DA648557   .a 5120 to 5657 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
DN994636 brain, whole brain .a 5167 to 5614 9 to 456       448/456
(98 %)
6 diff
(98.7 %id)
DR422190 eye, Pterygium .a 5207 to 5851 1 to 644       644/644
(100 %)
2 diff
(99.7 %id)
AK025113 colon .a 5216 to 7689 1 to 2474   tiling clone, available from FLJ, AAA   2474/2474
(100 %)
2 diff
(100.0 %id)
CN298726 embryonic stem cells, cell lines H1, H7, andH9 .a 5326 to 5671 1 to 346       346/346
(100 %)
1 diff
(99.8 %id)
CA391244 eye, RPE/choroid .a 5347 to 5844 1 to 498       498/498
(100 %)
5 diff
(99.0 %id)
DA342968 substantia nigra .a 5353 to 5849 2 to 498   capped   497/497
(100 %)
2 diff
(99.6 %id)
CD684197 normal nasopharynx .a 5398 to 5999 30 to 631       602/631
(95 %)
6 diff
(99.1 %id)
AW999816 breast_normal .a 5426 to 5683 21 to 279       259/279
(92 %)
6 diff
(97.9 %id)
CN298727 embryonic stem cells, DMSO-treated H9 cellline .a 5426 to 5853 1 to 428       428/428
(100 %)
1 diff
(99.8 %id)
BG823499 adenocarcinoma cell line, colon .a 5431 to 5809 1 to 382       382/871
(43 %)
6 diff
(99.4 %id)
BP431030   .a 5485 to 5888 1 to 406       406/406
(100 %)
8 diff
(98.1 %id)
BE536985 cervix .a 5487 to 6208 1 to 735       735/739
(99 %)
49 diff
(93.4 %id)
BU151674 dorsal root ganglia .a 5487 to 6397 1 to 918   tiling clone,   918/920
(99 %)
19 diff
(98.0 %id)
CX785919 human embryonic stem cells .a 5519 to 6304 1 to 786       786/786
(100 %)
1 diff
(99.9 %id)
AW069291 bone marrow stroma .a 5524 to 6043 1 to 524     Submitted on the opposite strand 524/524
(100 %)
6 diff
(98.9 %id)
BI559945 testis .a 5561 to 6187 1 to 630   available from MGC,   630/630
(100 %)
6 diff
(99.1 %id)
TI_44348597   .a 5561 to 6187 116 to 745       630/745
(84 %)
6 diff
(99.2 %id)
BC042985 testis .a 5566 to 7882 1 to 2317   available from MGC, AAA   2317/2317
(100 %)
3 diff
(99.9 %id)
BE144035 head_neck .a 5616 to 6081 1 to 465       465/465
(100 %)
11 diff
(97.7 %id)
BE877197 large cell carcinoma, undifferentiated, lung .a 5640 to 6411 22 to 773       752/783
(96 %)
43 diff
(94.6 %id)
BI088366 cervix .a 5656 to 6464 1 to 804       804/807
(99 %)
21 diff
(97.4 %id)
DB104460 thymus .a 5722 to 6131 2 to 411   capped   410/410
(100 %)
3 diff
(99.3 %id)
CX759298 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 5740 to 6428 1 to 689     Submitted on the opposite strand 689/740
(93 %)
7 diff
(99.1 %id)
BG290536 bladder, transitional cell papilloma, cell line .a 5743 to 6401 1 to 653       653/905
(72 %)
8 diff
(99.2 %id)
AU253590 neuroblastoma .a 5791 to 6436 1 to 645       645/646
(99 %)
9 diff
(98.7 %id)
BQ334507 marrow .a 5836 to 6261 505 to 79       427/505
(84 %)
0 diff
(100 %id)
DA384986 thalamus .a 5843 to 6415 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
H11858 whole brain .a 5932 to 6323 1 to 403       403/405
(99 %)
14 diff
(96.6 %id)
BF172517 blood .a 5951 to 6071 1 to 123       123/123
(100 %)
3 diff
(97.6 %id)
CN298725 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 5975 to 6607 9 to 640       632/640
(98 %)
11 diff
(98.3 %id)
CX761417 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 6014 to 6474 1 to 466       466/466
(100 %)
4 diff
(99.2 %id)
BG927111 cartilage .a 6202 to 6639 90 to 527       438/455
(96 %)
6 diff
(98.7 %id)
CX784143 human embryonic stem cells .a 6323 to 6900 1 to 578       578/578
(100 %)
0 diff
(100 %id)
BM782485 Ascites, stomach .a 6347 to 6963 1 to 616       616/616
(100 %)
1 diff
(99.9 %id)
BM832803 stomach .a 6380 to 7037 1 to 658       658/658
(100 %)
0 diff
(100 %id)
FN094281 breast carcinoma .a 6413 to 6526 115 to 1     Submitted on the opposite strand 115/115
(100 %)
1 diff
(99.2 %id)
AA326019 brain, cerebellum .a 6551 to 6902 1 to 353       353/353
(100 %)
1 diff
(99.8 %id)
BF382564 brain, primitive neuroectoderm .a 6557 to 7220 1 to 655       655/840
(77 %)
37 diff
(95.6 %id)
CN386936 embryonic stem cells, cell lines H1, H7, andH9 .a 6563 to 7213 25 to 675       651/675
(96 %)
6 diff
(99.2 %id)
AW937760 denis_drash .a 6568 to 7089 3 to 523       521/523
(99 %)
6 diff
(98.9 %id)
BG122064 adenocarcinoma, cell line, Liver .a 6578 to 7322 1 to 749       749/876
(85 %)
27 diff
(97.0 %id)
BM696078 eye, human retina .a 6584 to 7136 1 to 553       553/553
(100 %)
1 diff
(99.9 %id)
BX115230 placenta .a 6595 to 7277 1 to 683       683/683
(100 %)
0 diff
(100 %id)
BF348271 anaplastic oligodendroglioma with 1p/19qloss, brain .a 6617 to 7369 1 to 752       752/897
(83 %)
25 diff
(97.3 %id)
BU852750 testis .a 6646 to 7394 1 to 768       768/839
(91 %)
33 diff
(96.1 %id)
BM728705 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 6696 to 7414 1 to 719       719/719
(100 %)
2 diff
(99.8 %id)
AI630266 blood .a 6760 to 7182 423 to 1       423/430
(98 %)
0 diff
(100 %id)
R78309 placenta .a 6783 to 7194 1 to 426       426/496
(85 %)
17 diff
(96.6 %id)
AA348812 brain, right hemisphere .a 6802 to 7111 1 to 310       310/310
(100 %)
0 diff
(100 %id)
AW964078   .a 6803 to 7391 1 to 597       597/603
(99 %)
17 diff
(97.2 %id)
AW837141 leiomios .a 6806 to 7281 484 to 9       476/484
(98 %)
0 diff
(100 %id)
CA312504 Human Lung Epithelial cells, lung .a 6816 to 7688 884 to 19   AAA   866/867
(99 %)
11 diff
(98.8 %id)
BG029317 Bone, osteosarcoma, cell line .a 6822 to 7441 25 to 644       620/913
(67 %)
5 diff
(99.5 %id)
TI_149305446   .a 6960 to 7696 822 to 91   AAA   732/941
(77 %)
8 diff
(99.2 %id)
TI_154113155   .a 6960 to 7688 818 to 95   AAA   724/916
(79 %)
5 diff
(99.5 %id)
BU685797 lung, Primary Lung Epithelial Cells .a 6960 to 7696 750 to 19   AAA   732/735
(99 %)
8 diff
(99.0 %id)
BU742634 eye, fetal eye .a 6960 to 7688 743 to 19   AAA   725/751
(96 %)
4 diff
(99.5 %id)
CA448743 Chondrosarcoma, Left Pelvis .a 6967 to 7688 736 to 19   AAA   718/718
(100 %)
4 diff
(99.5 %id)
CB046567 2 pooled tumors (clear cell type), Kidney .a 6988 to 7513 10 to 535       526/535
(98 %)
6 diff
(98.9 %id)
BE925205 amnion_normal .a 6989 to 7230 242 to 1       242/246
(98 %)
5 diff
(98.0 %id)
CB242836 Human Lung Epithelial cells, lung .a 7011 to 7688 695 to 19   AAA   677/687
(98 %)
2 diff
(99.8 %id)
W56157 parathyroid gland, parathyroid tumor .a 7015 to 7626 1 to 610       610/610
(100 %)
6 diff
(99.1 %id)
AA320818 adipose tissue, white .a 7026 to 7350 1 to 329       329/329
(100 %)
5 diff
(98.5 %id)
FN158719 breast carcinoma .a 7047 to 7136 1 to 88       88/88
(100 %)
2 diff
(97.8 %id)
DR978926 placenta .a 7085 to 7189 104 to 1       104/126
(82 %)
4 diff
(96.9 %id)
TI_153988037   .a 7105 to 7688 676 to 93   AAA   584/646
(90 %)
21 diff
(96.8 %id)
H71400 liver and spleen .a 7114 to 7436 1 to 324       324/324
(100 %)
4 diff
(98.8 %id)
AI921895 2 pooled tumors (clear cell type), Kidney .a 7123 to 7689 571 to 5       567/571
(99 %)
0 diff
(100 %id)
BP431426   .a 7125 to 7456 1 to 333       333/333
(100 %)
7 diff
(97.9 %id)
AW138861   .a 7126 to 7688 580 to 18   AAA   563/563
(100 %)
3 diff
(99.5 %id)
AI670837 Kidney .a 7127 to 7688 575 to 14   AAA   562/562
(100 %)
1 diff
(99.9 %id)
BM996442 lung, Metastatic Chondrosarcoma .a 7128 to 7688 580 to 19   AAA   562/562
(100 %)
2 diff
(99.7 %id)
DB313293 tongue, tumor tissue .a 7130 to 7688 559 to 1       559/560
(99 %)
1 diff
(99.9 %id)
AW005930 anaplastic oligodendroglioma, brain .a 7140 to 7689 552 to 3       550/552
(99 %)
0 diff
(100 %id)
BP430652   .a 7141 to 7468 7 to 334       328/334
(98 %)
6 diff
(98.3 %id)
BM696074 eye, human retina .a 7144 to 7539 1 to 396       396/396
(100 %)
0 diff
(100 %id)
CA309673 Alveolar Macrophage, lung .a 7166 to 7688 545 to 23   AAA   523/523
(100 %)
0 diff
(100 %id)
BF431613 Kidney .a 7172 to 7688 517 to 1       517/517
(100 %)
3 diff
(99.5 %id)
ES315812 melanoma cell line .a 7181 to 7639 37 to 496       460/496
(92 %)
6 diff
(98.8 %id)
BP430546   .a 7186 to 7564 1 to 379       379/379
(100 %)
2 diff
(99.5 %id)
BP430062   .a 7191 to 7549 1 to 359       359/359
(100 %)
4 diff
(98.9 %id)
CD522704 pooled .a 7193 to 7674 1 to 488       488/739
(66 %)
12 diff
(98.4 %id)
T88807 liver and spleen .a 7207 to 7684 497 to 1       497/497
(100 %)
20 diff
(96.0 %id)
AA557211 breast .a 7214 to 7689 477 to 1       477/477
(100 %)
2 diff
(99.6 %id)
AU253591 neuroblastoma .a 7222 to 7882 700 to 40   AAA   661/661
(100 %)
18 diff
(97.3 %id)
BP397136 pancreatic islet .a 7224 to 7689 1 to 466     Submitted on the opposite strand 466/468
(99 %)
2 diff
(99.6 %id)
AI538158 Kidney .a 7229 to 7689 462 to 2       461/462
(99 %)
0 diff
(100 %id)
BQ674640 epidermoid carcinoma, cell line, salivary gland .a 7231 to 7688 1 to 458   AAA   458/458
(100 %)
0 diff
(100 %id)
AW516766 cervix, tumor .a 7233 to 7687 455 to 1       455/455
(100 %)
0 diff
(100 %id)
AI699368 pooled .a 7262 to 7689 430 to 3       428/430
(99 %)
0 diff
(100 %id)
AI521990 Kidney .a 7291 to 7688 398 to 1       398/398
(100 %)
1 diff
(99.8 %id)
BF056025 pooled germ cell tumors .a 7293 to 7688 396 to 1       396/396
(100 %)
9 diff
(97.8 %id)
R77938 placenta .a 7296 to 7670 390 to 1       390/396
(98 %)
18 diff
(95.5 %id)
R11371 liver and spleen .a 7305 to 7685 394 to 1     Submitted on the opposite strand 394/457
(86 %)
20 diff
(95.7 %id)
AA936411 pooled .a 7315 to 7689 377 to 3       375/377
(99 %)
0 diff
(100 %id)
CA391243 eye, RPE/choroid .a 7316 to 7882 583 to 17   AAA   567/567
(100 %)
0 diff
(100 %id)
AW769935 lymph node, lymphoma, follicular mixed small and largecell .a 7316 to 7689 374 to 1       374/374
(100 %)
0 diff
(100 %id)
H94058 liver and spleen .a 7320 to 7689 374 to 2       373/388
(96 %)
0 diff
(100 %id)
AI520734 adenocarcinoma, Pancreas .a 7320 to 7688 369 to 1       369/369
(100 %)
0 diff
(100 %id)
AW615164 Kidney .a 7327 to 7686 369 to 10       360/369
(97 %)
0 diff
(100 %id)
AW593541 pooled germ cell tumors .a 7339 to 7689 352 to 2       351/352
(99 %)
0 diff
(100 %id)
AW204387   .a 7349 to 7688 357 to 18   AAA   340/340
(100 %)
2 diff
(99.5 %id)
AW300536 Kidney .a 7357 to 7688 332 to 1       332/332
(100 %)
0 diff
(100 %id)
AI621012 pooled germ cell tumors .a 7361 to 7689 335 to 7       329/335
(98 %)
0 diff
(100 %id)
DW417567 Liver .a 7395 to 7683 17 to 305       289/305
(94 %)
6 diff
(98.1 %id)
AI791969   .a 7407 to 7697 23 to 313       291/313
(92 %)
6 diff
(98.1 %id)
AI022224 liver and spleen .a 7431 to 7689 262 to 4       259/262
(98 %)
0 diff
(100 %id)
AA724039 pooled .a 7445 to 7689 246 to 2       245/246
(99 %)
0 diff
(100 %id)
AI610169 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 7476 to 7702 227 to 1       227/227
(100 %)
1 diff
(99.6 %id)
BU753695 placenta .a 7492 to 7688 215 to 18   AAA   198/198
(100 %)
12 diff
(94.0 %id)
AW078494 colon, juvenile granulosa tumor .a 7530 to 7688 159 to 1       159/160
(99 %)
3 diff
(98.2 %id)
H11497 whole brain .a 7534 to 7882 370 to 10       361/394
(91 %)
0 diff
(100 %id)
BG952032 colon .a 7561 to 7688 1 to 126   AAA   126/126
(100 %)
4 diff
(96.9 %id)
CV354971 lung_tumor .b-u 1 to 538 632 to 93   tiling clone, Submitted on the opposite strand 540/636
(84 %)
0 diff
(100 %id)
DB068968 testis .b-u 84 to 618 2 to 537   tiling clone, capped   536/536
(100 %)
1 diff
(99.9 %id)
BF335110 colon .b-u 99 to 534 469 to 34       436/469
(92 %)
0 diff
(100 %id)
BF330048 breast_normal .b-u 247 to 666 433 to 14       420/433
(96 %)
0 diff
(100 %id)
BI003589 head_normal .b-u 470 to 577 1 to 108       108/108
(100 %)
1 diff
(99.1 %id)
W63596 parathyroid gland, parathyroid tumor .b-u 594 to 1110 517 to 1   tiling clone, Submitted on the opposite strand 517/517
(100 %)
1 diff
(99.9 %id)
CR746574 parathyroid gland, parathyroid tumor .b-u 639 to 1110 472 to 1   tiling clone, Submitted on the opposite strand 472/472
(100 %)
0 diff
(100 %id)
CV419870 colon_normal .b-u 1865 to 2109 246 to 1   tiling clone, Submitted on the opposite strand 246/251
(98 %)
10 diff
(96.1 %id)
DB453277 testis .c 1 to 503 1 to 503   tiling clone,   503/503
(100 %)
2 diff
(99.7 %id)
GD137451   .c 186 to 274 1 to 89   tiling clone,   89/90
(98 %)
6 diff
(93.4 %id)
CR623090 Neuroblastoma Cot 25-normalized .c 373 to 2403 1 to 2031   tiling clone,   2031/2031
(100 %)
0 diff
(100 %id)
BX394274 Neuroblastoma Cot 25-normalized .c 373 to 1278 1 to 901   fully sequenced,   901/901
(100 %)
10 diff
(98.9 %id)
CB155018 brain .c 544 to 1202 1 to 662       662/663
(99 %)
10 diff
(98.5 %id)
BM789751 Ascites, stomach .c 544 to 1162 1 to 622       622/622
(100 %)
6 diff
(99.1 %id)
BY995662   .c 701 to 1383 30 to 714       685/714
(95 %)
12 diff
(98.4 %id)
BM837093 Ascites, stomach .c 773 to 1421 1 to 652       652/652
(100 %)
6 diff
(99.1 %id)
BX394273 Neuroblastoma Cot 25-normalized .c 1248 to 2403 1146 to 1   fully sequenced,   1146/1146
(100 %)
17 diff
(98.6 %id)
DC400825 testis .d 1 to 471 1 to 471   tiling clone,   471/471
(100 %)
3 diff
(99.4 %id)
DA332434 hippocampus .d 204 to 792 2 to 591   capped   590/590
(100 %)
3 diff
(99.5 %id)
AK293040 uterus .d 215 to 1690 1 to 1476 exact tiling clone,   1476/1476
(100 %)
2 diff
(99.9 %id)
DB258987 uterus .d 216 to 780 2 to 568   capped   567/567
(100 %)
2 diff
(99.7 %id)
BE884266 leiomyosarcoma, uterus .d 250 to 886 1 to 639       639/781
(81 %)
12 diff
(98.5 %id)
BQ062139 lymph, lymphoma, cell line .d 717 to 1624 1 to 917   tiling clone,   917/998
(91 %)
18 diff
(98.2 %id)
BQ064992 lymph, lymphoma, cell line .d 717 to 1666 1 to 963   tiling clone,   963/1025
(93 %)
32 diff
(96.9 %id)
AK057258 testis .e 1 to 1500 236 to 1735 exact tiling clone, available from FLJ,   1500/1735
(86 %)
6 diff
(99.7 %id)
DB020243 testis .e 1 to 332 237 to 568   capped   332/567
(58 %)
6 diff
(99.0 %id)
BU902153 leiomyosarcoma, uterus .e 206 to 1224 1 to 1019       1019/1163
(87 %)
13 diff
(98.9 %id)
DB481525 hippocampus .e 315 to 778 1 to 464       464/464
(100 %)
0 diff
(100 %id)
BQ364533.
matches multiple genes
stomach_normal .e 444 to 672 1 to 227     also hits gene yorere 227/227
(100 %)
17 diff
(92.6 %id)
CK430481 eye, lacrimal gland .e 469 to 1062 1 to 594       594/594
(100 %)
0 diff
(100 %id)
BM909352 lymph, lymphoma, cell line .e 542 to 1456 1 to 928       928/1047
(88 %)
16 diff
(98.5 %id)
BQ065187 lymph, lymphoma, cell line .e 542 to 1462 1 to 931       931/988
(94 %)
15 diff
(98.5 %id)
BG178812 adenocarcinoma, cell line, Prostate .e 592 to 1343 2 to 752       751/826
(90 %)
20 diff
(97.6 %id)
DB335779 testis .e 1058 to 1500 443 to 1       443/452
(98 %)
0 diff
(100 %id)
BM708095 eye, RPE and Choroid .e 1228 to 1687 1 to 460       460/460
(100 %)
1 diff
(99.8 %id)
CX866996 embryonic stem .e 1333 to 2083 1 to 751   fully sequenced,   751/751
(100 %)
1 diff
(99.9 %id)
BM694578 eye, RPE and Choroid .e 1438 to 1845 1 to 408   tiling clone,   408/408
(100 %)
0 diff
(100 %id)
AA279051 germinal center B cell .e 1458 to 1920 1 to 458       458/458
(100 %)
5 diff
(99.0 %id)
AA102134 colon, tumor .e 1497 to 1662 1 to 169       169/169
(100 %)
3 diff
(98.3 %id)
BM693473 eye, Retina Foveal and Macular .e 1683 to 2157 1 to 475   tiling clone, fully sequenced,   475/475
(100 %)
0 diff
(100 %id)
AA179765   .e 1772 to 2117 35 to 379       345/379
(91 %)
6 diff
(98.5 %id)
CA307592 Alveolar Macrophage, lung .e 1830 to 2617 806 to 19   AAA   788/788
(100 %)
4 diff
(99.5 %id)
TI_154006368   .e 1836 to 2615 921 to 158   AAA   764/1024
(74 %)
0 diff
(100 %id)
BU168458 ductal carcinoma, cell line, Pancreas .e 1849 to 2616 813 to 42     Submitted on the opposite strand 772/1095
(70 %)
0 diff
(100 %id)
BQ889025 ductal carcinoma, cell line, Pancreas .e 1851 to 2613 806 to 43     Submitted on the opposite strand 764/900
(84 %)
0 diff
(100 %id)
BG389989 embryonal carcinoma, cell line, testis .e 1865 to 2629 1 to 764       764/778
(98 %)
14 diff
(98.3 %id)
BG389996 embryonal carcinoma, cell line, testis .e 1866 to 2622 1 to 757       757/774
(97 %)
8 diff
(99.0 %id)
BQ901098 ductal carcinoma, cell line, Pancreas .e 1876 to 2616 796 to 41   tiling clone, Submitted on the opposite strand 756/971
(77 %)
0 diff
(100 %id)
BU625539 cell lines, Enchondroma .e 1894 to 2613 739 to 19   AAA   721/721
(100 %)
3 diff
(99.6 %id)
CA306259 Alveolar Macrophage, lung .e 1895 to 2615 740 to 19   AAA   722/722
(100 %)
1 diff
(99.9 %id)
BU687374 lung .e 1901 to 2616 735 to 19   AAA   717/717
(100 %)
2 diff
(99.8 %id)
BU688518 lung .e 1901 to 2615 733 to 19   AAA   715/715
(100 %)
0 diff
(100 %id)
BQ446937 Knee, Osteoarthritic Cartilage .e 1901 to 2613 732 to 19   AAA   714/714
(100 %)
3 diff
(99.6 %id)
CA415548 Chondrosarcoma Grade II, Left Pelvis .e 1901 to 2613 732 to 19   AAA   714/714
(100 %)
1 diff
(99.9 %id)
BQ018096 Fibrosarcoma .e 1902 to 2614 732 to 19   AAA   714/714
(100 %)
3 diff
(99.6 %id)
CB853490 Human Lung Epithelial cells, lung .e 1904 to 2613 728 to 19   AAA   710/710
(100 %)
0 diff
(100 %id)
CD368720 Alveolar Macrophage, lung .e 1904 to 2613 729 to 19   AAA   711/711
(100 %)
1 diff
(99.9 %id)
CA439625 lung, Lung Focal Fibrosis .e 1935 to 2613 698 to 19   AAA   680/680
(100 %)
2 diff
(99.8 %id)
BE797559 lung, small cell carcinoma .e 1940 to 2625 1 to 684   tiling clone,   684/684
(100 %)
2 diff
(99.8 %id)
TI_149278217   .e 1946 to 2613 758 to 92   AAA   667/667
(100 %)
4 diff
(99.5 %id)
BM991862 Bone, Subchondral Bone .e 1955 to 2615 680 to 19   AAA   662/662
(100 %)
1 diff
(99.9 %id)
BU678310 lung .e 1968 to 2613 664 to 19   AAA   646/646
(100 %)
3 diff
(99.6 %id)
BM977557 lung, Primary Lung Cystic Fibrosis EpithelialCells .e 1968 to 2615 667 to 19   AAA   649/649
(100 %)
1 diff
(99.9 %id)
BM999759 Fibrosarcoma .e 1971 to 2613 662 to 19   AAA   644/644
(100 %)
1 diff
(99.9 %id)
BQ008143 Chondrosarcoma, Left Pelvis .e 1977 to 2615 658 to 19   AAA   640/640
(100 %)
3 diff
(99.6 %id)
BU730987 eye, RPE and Choroid .e 1978 to 2613 654 to 19   AAA   636/636
(100 %)
2 diff
(99.7 %id)
BU731949 eye, RPE and Choroid .e 1978 to 2613 655 to 19   AAA   637/637
(100 %)
1 diff
(99.9 %id)
CB305458 lung, Primary Lung Cystic Fibrosis EpithelialCells .e 2003 to 2615 631 to 19   AAA   613/613
(100 %)
0 diff
(100 %id)
CB241219 Human Lung Epithelial cells, lung .e 2003 to 2615 630 to 19   AAA   612/612
(100 %)
2 diff
(99.7 %id)
BU616213 Bone, Subchondral Bone .e 2003 to 2613 629 to 19   AAA   611/611
(100 %)
2 diff
(99.7 %id)
CA423480 cell lines, Chondrosarcoma .e 2003 to 2613 629 to 19   AAA   611/611
(100 %)
0 diff
(100 %id)
CA748829 Alveolar Macrophage, lung .e 2003 to 2613 630 to 19   AAA   612/612
(100 %)
3 diff
(99.6 %id)
CA445454 Chondrosarcoma, Left Pubic Bone .e 2020 to 2613 613 to 19   AAA   595/595
(100 %)
1 diff
(99.9 %id)
BM090797 Fetal Pancreas (4 Pooled Donors, 18 - 20weeks, Stratagene #738023) .e 2038 to 2613 578 to 3       576/578
(99 %)
0 diff
(100 %id)
AI131322 heart .e 2050 to 2615 575 to 10       566/575
(98 %)
0 diff
(100 %id)
CX866912 embryonic stem .e 2053 to 2614 591 to 30   fully sequenced, AAA   562/562
(100 %)
2 diff
(99.7 %id)
AA584417 colon, colon tumor RER+ .e 2059 to 2615 556 to 1       556/556
(100 %)
2 diff
(99.7 %id)
AW245066 lung, small cell carcinoma .e 2074 to 2613 550 to 11   AAA   540/540
(100 %)
0 diff
(100 %id)
BG231699 blood, lymphocyte .e 2087 to 2613 527 to 1       527/527
(100 %)
0 diff
(100 %id)
DB570359 hypothalamus .e 2095 to 2613 1 to 519     Submitted on the opposite strand 519/521
(99 %)
4 diff
(99.3 %id)
AI245980 adenocarcinoma, colon .e 2096 to 2613 518 to 1       518/518
(100 %)
1 diff
(99.9 %id)
AA708685 heart .e 2106 to 2613 517 to 11   AAA   507/507
(100 %)
1 diff
(99.9 %id)
CR741639   .e 2119 to 2613 1 to 495   AAA   495/495
(100 %)
0 diff
(100 %id)
AI371777 brain, glioblastoma (pooled) .e 2124 to 2613 501 to 12   AAA   490/490
(100 %)
0 diff
(100 %id)
BM668752 eye, Retina Foveal and Macular .e 2127 to 2614 505 to 19   fully sequenced, AAA   487/487
(100 %)
0 diff
(100 %id)
AW070801 breast, four pooled high-grade tumors, including twoprimary tumors and two metastatic to ovary .e 2134 to 2615 481 to 1       481/481
(100 %)
1 diff
(99.8 %id)
AW167051 serous papillary carcinoma, high grade, 2pooled tumors, uterus .e 2136 to 2613 482 to 5       478/482
(99 %)
0 diff
(100 %id)
AW272199 colon, moderately-differentiated adenocarcinoma .e 2137 to 2613 482 to 6       477/482
(98 %)
0 diff
(100 %id)
AI818626 adenocarcinoma, Pancreas .e 2138 to 2615 495 to 18   AAA   478/478
(100 %)
2 diff
(99.6 %id)
AI568413 anaplastic oligodendroglioma, brain .e 2140 to 2614 493 to 18   AAA   476/476
(100 %)
2 diff
(99.6 %id)
AW071015 breast, four pooled high-grade tumors, including twoprimary tumors and two metastatic to ovary .e 2142 to 2613 474 to 3       472/474
(99 %)
0 diff
(100 %id)
DB518753 testis .e 2144 to 2615 1 to 471     Submitted on the opposite strand 471/471
(100 %)
1 diff
(99.8 %id)
DB550345 hippocampus .e 2144 to 2611 1 to 467     Submitted on the opposite strand 467/469
(99 %)
2 diff
(99.6 %id)
AI215703 carcinoid, lung .e 2144 to 2615 473 to 2       472/473
(99 %)
0 diff
(100 %id)
AW068998 bone marrow stroma .e 2148 to 2613 488 to 23   AAA   466/466
(100 %)
0 diff
(100 %id)
BQ026341 placenta .e 2151 to 2613 483 to 19   AAA   465/465
(100 %)
3 diff
(99.4 %id)
AA947299 pooled .e 2155 to 2613 466 to 8       459/466
(98 %)
0 diff
(100 %id)
AW337834 myeloid cells, 18 pooled CML cases, BCR/ABLrearrangement positive, includes both chronic phase andmyeloid blast crisis, whole blood .e 2156 to 2615 461 to 2       460/461
(99 %)
0 diff
(100 %id)
AI754832 bone marrow stroma .e 2161 to 2617 477 to 21   AAA   457/457
(100 %)
0 diff
(100 %id)
DB574305 hypothalamus .e 2163 to 2613 1 to 451     Submitted on the opposite strand 451/453
(99 %)
4 diff
(99.2 %id)
AI989360 thymus, pooled .e 2168 to 2613 448 to 3       446/448
(99 %)
0 diff
(100 %id)
AW173075 pooled .e 2168 to 2613 456 to 11   AAA   446/446
(100 %)
0 diff
(100 %id)
BM989265 Fibrosarcoma .e 2172 to 2616 464 to 19   AAA   446/446
(100 %)
1 diff
(99.8 %id)
AI198933   .e 2174 to 2613 453 to 14   AAA   440/440
(100 %)
0 diff
(100 %id)
DB519867 testis .e 2181 to 2617 1 to 437     Submitted on the opposite strand 437/438
(99 %)
1 diff
(99.8 %id)
BM150762 leukopheresis .e 2185 to 2614 446 to 17   AAA   430/430
(100 %)
1 diff
(99.8 %id)
AA180439   .e 2188 to 2614 427 to 1       427/430
(99 %)
3 diff
(99.4 %id)
CA448276 Chondrosarcoma, Left Pubic Bone .e 2188 to 2613 445 to 19   AAA   427/427
(100 %)
1 diff
(99.8 %id)
AI272688 adenocarcinoma, colon .e 2190 to 2615 427 to 1       427/427
(100 %)
2 diff
(99.6 %id)
AI690558 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .e 2190 to 2613 444 to 21   AAA   424/424
(100 %)
0 diff
(100 %id)
AI921933 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .e 2190 to 2613 440 to 17   AAA   424/424
(100 %)
0 diff
(100 %id)
AI933037 anaplastic oligodendroglioma, brain .e 2190 to 2616 429 to 3       427/429
(99 %)
0 diff
(100 %id)
AI887997 serous papillary carcinoma, high grade, 2pooled tumors, uterus .e 2191 to 2613 438 to 16   AAA   423/423
(100 %)
0 diff
(100 %id)
BQ023497 placenta .e 2192 to 2613 439 to 18   AAA   422/422
(100 %)
0 diff
(100 %id)
N63254 multiple sclerosis lesions .e 2193 to 2613 422 to 1       422/423
(99 %)
3 diff
(99.3 %id)
AI126431   .e 2194 to 2613 443 to 24   AAA   420/420
(100 %)
4 diff
(99.1 %id)
AI624437 adenocarcinoma, Pancreas .e 2194 to 2613 444 to 25   AAA   420/420
(100 %)
3 diff
(99.3 %id)
AW591568 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .e 2194 to 2613 429 to 10       420/429
(97 %)
0 diff
(100 %id)
DB509868 testis .e 2196 to 2613 1 to 418     Submitted on the opposite strand 418/418
(100 %)
0 diff
(100 %id)
CA338221 1st pharyngeal arch (pooled) .e 2196 to 2613 1 to 418   AAA   418/418
(100 %)
1 diff
(99.8 %id)
BM150903 leukopheresis .e 2196 to 2614 435 to 17   AAA   419/419
(100 %)
3 diff
(99.3 %id)
AA594413 colon, colon tumor RER+ .e 2198 to 2613 416 to 1       416/416
(100 %)
1 diff
(99.8 %id)
AI078400   .e 2199 to 2617 423 to 5       419/423
(99 %)
0 diff
(100 %id)
AA599812 bone marrow stroma .e 2204 to 2613 427 to 18   AAA   410/410
(100 %)
2 diff
(99.6 %id)
AA838284 colon, colon tumor .e 2204 to 2613 427 to 20   AAA   408/408
(100 %)
2 diff
(99.6 %id)
AW517813 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .e 2209 to 2613 410 to 6       405/410
(98 %)
0 diff
(100 %id)
BQ023585 placenta .e 2212 to 2615 421 to 18   AAA   404/404
(100 %)
0 diff
(100 %id)
AW473347 serous papillary carcinoma, high grade, 2pooled tumors, uterus .e 2218 to 2613 402 to 7       396/402
(98 %)
0 diff
(100 %id)
BF197853 skin, normal, 4 pooled samples .e 2219 to 2613 395 to 1       395/395
(100 %)
0 diff
(100 %id)
AA102135 colon, tumor .e 2221 to 2613 407 to 15   AAA   393/393
(100 %)
2 diff
(99.5 %id)
AI888560 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .e 2223 to 2613 395 to 5       391/396
(98 %)
0 diff
(100 %id)
AA977159 pooled germ cell tumors .e 2228 to 2615 388 to 1       388/388
(100 %)
0 diff
(100 %id)
AI394195 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .e 2228 to 2615 393 to 6       388/393
(98 %)
0 diff
(100 %id)
AA808724 carcinoid, lung .e 2229 to 2613 389 to 5       385/389
(98 %)
0 diff
(100 %id)
AA857561 adenocarcinoma, colon .e 2229 to 2613 385 to 1       385/385
(100 %)
2 diff
(99.5 %id)
AA931457 Kidney .e 2230 to 2613 419 to 38   AAA   382/382
(100 %)
1 diff
(99.8 %id)
AA931163 pooled germ cell tumors .e 2230 to 2613 401 to 19   AAA   383/383
(100 %)
1 diff
(99.8 %id)
AA903393 pooled germ cell tumors .e 2232 to 2615 384 to 1       384/384
(100 %)
0 diff
(100 %id)
AI079829   .e 2235 to 2613 401 to 23   AAA   379/379
(100 %)
0 diff
(100 %id)
AI565462 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .e 2236 to 2616 383 to 3       381/383
(99 %)
0 diff
(100 %id)
AI375467   .e 2237 to 2613 380 to 4       377/380
(99 %)
0 diff
(100 %id)
AI499948 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .e 2237 to 2616 380 to 1       380/380
(100 %)
1 diff
(99.8 %id)
AI138904 placenta .e 2246 to 2613 380 to 13   AAA   368/368
(100 %)
0 diff
(100 %id)
AA278276 germinal center B cell .e 2248 to 2613 392 to 27   AAA   366/366
(100 %)
1 diff
(99.8 %id)
AI266403 2 pooled tumors (clear cell type), Kidney .e 2257 to 2613 361 to 5       357/361
(98 %)
0 diff
(100 %id)
AA872947 2 pooled tumors (clear cell type), Kidney .e 2258 to 2614 363 to 7       357/363
(98 %)
0 diff
(100 %id)
BM741969 stomach .e 2258 to 2613 1 to 355   AAA   355/355
(100 %)
2 diff
(99.5 %id)
AI087907 parathyroid gland, parathyroid tumor .e 2259 to 2613 366 to 12   AAA   355/355
(100 %)
1 diff
(99.8 %id)
AI581173 colon, moderately-differentiated adenocarcinoma .e 2259 to 2613 364 to 10       355/364
(97 %)
0 diff
(100 %id)
AI383064 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .e 2264 to 2615 357 to 6       352/357
(98 %)
0 diff
(100 %id)
BF475896 sciatic nerve .e 2265 to 2618 363 to 10       354/363
(97 %)
0 diff
(100 %id)
AW073520 connective tissue, five pooled sarcomas, including myxoidliposarcoma, solitary fibrous tumor, malignant fibroushistiocytoma, gastrointestinal stromal tumor, andmesothelioma .e 2266 to 2613 366 to 19   AAA   348/348
(100 %)
2 diff
(99.5 %id)
AI631238 Kidney, renal cell tumor .e 2285 to 2613 334 to 6       329/334
(98 %)
0 diff
(100 %id)
AI682735 adenocarcinoma, Pancreas .e 2285 to 2615 343 to 13   AAA   331/331
(100 %)
1 diff
(99.7 %id)
AA846551 parathyroid gland, parathyroid tumor .e 2295 to 2620 328 to 7       322/328
(98 %)
0 diff
(100 %id)
AA911916 adenocarcinoma, colon .e 2299 to 2613 315 to 1       315/317
(99 %)
0 diff
(100 %id)
AA523630 metastatic prostate bone lesion .e 2310 to 2613 1 to 304   AAA   304/304
(100 %)
2 diff
(99.4 %id)
R46549 breast .e 2314 to 2614 1 to 303   AAA   303/303
(100 %)
4 diff
(98.7 %id)
H25355 breast .e 2314 to 2613 1 to 300       300/311
(96 %)
5 diff
(98.4 %id)
AI204262   .e 2319 to 2613 298 to 4       295/298
(98 %)
0 diff
(100 %id)
T17335   .e 2321 to 2615 295 to 1       295/295
(100 %)
0 diff
(100 %id)
H24062.
matches multiple genes
whole brain .e 2327 to 2613 303 to 14   AAA also hits gene SLC35F4 290/290
(100 %)
4 diff
(98.7 %id)
T33794 brain .e 2335 to 2615 281 to 1       281/281
(100 %)
0 diff
(100 %id)
AI476394 colon, moderately-differentiated adenocarcinoma .e 2342 to 2615 275 to 2       274/275
(99 %)
0 diff
(100 %id)
BM193059 leukopheresis .e 2347 to 2612 283 to 17   AAA   267/267
(100 %)
2 diff
(99.3 %id)
CD104605 Pooled-Skin .e 2348 to 2615 1 to 268   AAA   268/268
(100 %)
3 diff
(98.9 %id)
AW339006 adenocarcinoma, Pancreas .e 2356 to 2615 264 to 5       260/264
(98 %)
0 diff
(100 %id)
DR978736 placenta .e 2368 to 2617 1 to 249     Submitted on the opposite strand 249/259
(96 %)
4 diff
(98.5 %id)
T32093 brain .e 2378 to 2613 236 to 1       236/236
(100 %)
0 diff
(100 %id)
AA826921 germinal center B cell .e 2409 to 2613 236 to 32   AAA   205/205
(100 %)
2 diff
(99.1 %id)
BG389702 embryonal carcinoma, cell line, testis .e 2411 to 2613 1 to 203   AAA   203/203
(100 %)
3 diff
(98.6 %id)
CA438719 lung, Metastatic Chondrosarcoma .e 2425 to 2613 207 to 19   AAA   189/189
(100 %)
1 diff
(99.5 %id)
CB107534 Liver .e 2428 to 2613 1 to 186       186/204
(91 %)
1 diff
(99.6 %id)
AA954910 Kidney, kidney tumor .e 2433 to 2613 226 to 46   AAA   181/181
(100 %)
1 diff
(99.5 %id)
Z28950 leg muscle, skeletal muscle .e 2440 to 2608 176 to 8       169/176
(96 %)
0 diff
(100 %id)
AA587767 colon, colon tumor RER+ .e 2441 to 2614 196 to 23   AAA   174/174
(100 %)
2 diff
(98.9 %id)
AI682878 adenocarcinoma, Pancreas .e 2451 to 2613 165 to 3       163/165
(98 %)
0 diff
(100 %id)
AI001747   .e 2468 to 2613 150 to 5       146/150
(97 %)
0 diff
(100 %id)
AA780759   .e 2495 to 2615 135 to 15   AAA   121/121
(100 %)
0 diff
(100 %id)
AW001130 colon, colonic mucosa from 3 patients with Crohn'sdisease .f 1 to 432 432 to 1   tiling clone,   432/432
(100 %)
0 diff
(100 %id)
DA523000 brain .f 250 to 819 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA033997   .f 252 to 823 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA538085 Kidney .f 252 to 839 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DB154486 thymus .f 252 to 827 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DB160582 thymus .f 252 to 841 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
BP279193   .f 253 to 845 1 to 593       593/593
(100 %)
0 diff
(100 %id)
DA382474 thalamus .f 254 to 825 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA528129 brain .f 254 to 849 2 to 597   capped   596/596
(100 %)
0 diff
(100 %id)
DA678221   .f 254 to 909 2 to 657   capped   656/730
(89 %)
1 diff
(99.9 %id)
DA943000 Spleen .f 254 to 841 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DA954106 Spleen .f 254 to 835 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DB265564 uterus .f 254 to 828 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA299605 hippocampus .f 255 to 824 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA582902 lung .f 259 to 850 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
DA631611 Kidney .f 259 to 839 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DB263798 uterus .f 259 to 839 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
AK291388 brain .f 260 to 1828 1 to 1563 M238S P239A S240N A241T N242P ...     1563/1563
(100 %)
5 diff
(99.7 %id)
BP227297   .f 260 to 841 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DB499240 hypothalamus .f 260 to 723 1 to 464       464/464
(100 %)
0 diff
(100 %id)
DB503096 hypothalamus .f 260 to 732 1 to 473       473/473
(100 %)
0 diff
(100 %id)
BJ992565 hepatoblastoma .f 260 to 746 1 to 487       487/487
(100 %)
1 diff
(99.8 %id)
BP274491 Kidney .f 260 to 842 1 to 583       583/583
(100 %)
0 diff
(100 %id)
BM788524 stomach .f 260 to 855 1 to 596       596/596
(100 %)
0 diff
(100 %id)
DC391212 Spleen .f 260 to 602 1 to 343       343/348
(98 %)
1 diff
(99.8 %id)
BP356635 mammary gland .f 260 to 841 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DA008839 adrenal gland .f 261 to 1016 2 to 760   capped   759/759
(100 %)
7 diff
(99.1 %id)
DA019914   .f 261 to 836 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA020468   .f 261 to 833 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA021589   .f 261 to 832 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA058153 cerebellum .f 261 to 844 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DA152767 amygdala .f 261 to 835 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA166870 amygdala .f 261 to 839 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA202896 brain .f 261 to 830 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA248296 brain .f 261 to 846 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DA261923 caudate nucleus .f 261 to 830 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA281625 corpus callosum .f 261 to 830 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA284040 corpus callosum .f 261 to 830 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA314392 hippocampus .f 261 to 841 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA387984 thalamus .f 261 to 833 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA388674 thalamus .f 261 to 842 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DA394163 thalamus .f 261 to 851 2 to 592   capped   591/591
(100 %)
0 diff
(100 %id)
DA468214   .f 261 to 839 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA473663   .f 261 to 831 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA476692   .f 261 to 830 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA590398 lung .f 261 to 832 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA656398   .f 261 to 831 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA774102 brain .f 261 to 845 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
DA865399 Prostate .f 261 to 736 2 to 477   capped   476/476
(100 %)
1 diff
(99.8 %id)
DA879255 Prostate .f 261 to 835 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA880524   .f 261 to 1072 2 to 815   capped   814/815
(99 %)
7 diff
(99.2 %id)
DA913645   .f 261 to 837 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA927706 small intestine .f 261 to 835 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA938474 Spleen .f 261 to 846 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DB110619 thymus .f 261 to 844 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DB150168 thymus .f 261 to 838 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DB181026 kidney, tumor tissue .f 261 to 838 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DB201777 trachea .f 261 to 843 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
DB239198 trachea .f 261 to 840 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DB252029 uterus .f 261 to 884 2 to 625   capped   624/624
(100 %)
0 diff
(100 %id)
DB266862 uterus .f 261 to 849 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
DA879920 Prostate .f 263 to 849 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DB291719 uterus .f 263 to 850 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DA306002 hippocampus .f 266 to 850 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
DA947340 Spleen .f 266 to 843 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
BC103745 Lung, large cell carcinoma .f 267 to 2647 1 to 2381 exact tiling clone, AAA   2381/2381
(100 %)
0 diff
(100 %id)
BU169760 large cell carcinoma, lung .f 269 to 1072 1 to 809       809/848
(95 %)
10 diff
(98.9 %id)
AL539540 brain, fetal brain .f 270 to 1259 1 to 990       990/990
(100 %)
0 diff
(100 %id)
DR158986 human embryonic stem cells differentiated toan early endodermal cell type .f 270 to 1013 1 to 744       744/744
(100 %)
0 diff
(100 %id)
DC329233 corpus callosum .f 271 to 704 1 to 434       434/434
(100 %)
0 diff
(100 %id)
DA272538 caudate nucleus .f 272 to 842 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA335846 hippocampus .f 272 to 856 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
DA339948 hippocampus .f 272 to 870 2 to 600   capped   599/599
(100 %)
0 diff
(100 %id)
DA350507 substantia nigra .f 272 to 848 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
BI087431 cervix .f 272 to 1001 1 to 733       733/733
(100 %)
3 diff
(99.6 %id)
DB112090 thymus .f 272 to 843 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DB198441 trachea .f 272 to 904 2 to 634   capped   633/633
(100 %)
0 diff
(100 %id)
DB454432 testis .f 273 to 729 1 to 457       457/457
(100 %)
0 diff
(100 %id)
BM917767 blood, natural killer cells, cell line .f 275 to 1006 1 to 734       734/1068
(68 %)
15 diff
(98.6 %id)
BQ051104 leiomyosarcoma, uterus .f 275 to 1015 1 to 743       743/1038
(71 %)
10 diff
(99.1 %id)
DA086225 cerebellum .f 277 to 860 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DA205545 brain .f 277 to 873 2 to 598   capped   597/597
(100 %)
0 diff
(100 %id)
DB225773 trachea .f 277 to 849 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DB292104 uterus .f 277 to 872 2 to 597   capped   596/596
(100 %)
0 diff
(100 %id)
DA191477 amygdala .f 278 to 850 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA395290 thalamus .f 278 to 854 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
BM153025 leukopheresis .f 279 to 769 1 to 491       491/491
(100 %)
2 diff
(99.6 %id)
AK057902 brain .f 282 to 2647 1 to 2366 exact available from FLJ,   2366/2366
(100 %)
3 diff
(99.9 %id)
BP375431 uterus .f 282 to 851 1 to 570       570/570
(100 %)
0 diff
(100 %id)
BP214947 corpus callosum .f 283 to 863 1 to 581       581/581
(100 %)
0 diff
(100 %id)
BP225183   .f 283 to 863 1 to 581       581/581
(100 %)
0 diff
(100 %id)
DA481657   .f 283 to 870 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DA531927 brain .f 283 to 872 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
BM153702 leukopheresis .f 283 to 792 1 to 511       511/511
(100 %)
9 diff
(98.3 %id)
AK293022   .f 284 to 1516 1 to 1233 exact     1233/1233
(100 %)
0 diff
(100 %id)
DA018834   .f 284 to 974 2 to 698   capped   697/702
(99 %)
9 diff
(98.8 %id)
DA020548   .f 284 to 856 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA128582 cerebellum .f 284 to 863 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA172937 amygdala .f 284 to 855 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA297751 hippocampus .f 284 to 862 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA335190 hippocampus .f 284 to 863 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA337808 hippocampus .f 284 to 879 2 to 597   capped   596/596
(100 %)
0 diff
(100 %id)
DA430780 colon .f 284 to 855 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA453643 tongue, tumor tissue .f 284 to 858 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA459699 tongue, tumor tissue .f 284 to 858 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA470021   .f 284 to 860 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DT220898 brain .f 284 to 953 12 to 681       670/681
(98 %)
6 diff
(99.2 %id)
DA522796 brain .f 284 to 864 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA549928   .f 284 to 872 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
BP249040 Kidney .f 284 to 865 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BQ881711 brain, neuroblastoma, cell line .f 284 to 1044 1 to 769       769/827
(92 %)
13 diff
(98.5 %id)
DA629010 Kidney .f 284 to 864 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA651137   .f 284 to 854 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA783708 brain .f 284 to 859 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA880663   .f 284 to 1033 2 to 752   capped   751/751
(100 %)
3 diff
(99.7 %id)
DA924906 small intestine .f 284 to 854 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA937853 Spleen .f 284 to 860 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA941013 Spleen .f 284 to 876 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
DB029731 testis .f 284 to 855 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DB044896 testis .f 284 to 855 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DB120921 thymus .f 284 to 854 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DB123582 thymus .f 284 to 913 2 to 631   capped   630/630
(100 %)
0 diff
(100 %id)
DB152813 thymus .f 284 to 866 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
DB196595 trachea .f 284 to 855 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DB199503 trachea .f 284 to 854 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DB231488 trachea .f 284 to 868 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
DB267657 uterus .f 284 to 872 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
DA239338 brain .f 285 to 858 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DB151148 thymus .f 285 to 862 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DB155398 thymus .f 285 to 862 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DB246575   .f 285 to 1125 2 to 842   capped   841/877
(95 %)
17 diff
(98.1 %id)
DA147305 amygdala .f 286 to 865 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA593740 lung .f 286 to 857 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
BP373843 umbilical cord .f 287 to 868 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DA050636   .f 289 to 874 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DA022206   .f 290 to 863 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA633458 Kidney .f 290 to 863 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DB030095 testis .f 290 to 876 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA199553 brain .f 291 to 877 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA934941 Spleen .f 291 to 873 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
BP278172   .f 292 to 873 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DA167241 amygdala .f 293 to 870 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DB444899 testis .f 293 to 723 1 to 431       431/431
(100 %)
0 diff
(100 %id)
BM465942 eye, retinoblastoma .f 293 to 1115 1 to 817       817/1008
(81 %)
12 diff
(98.9 %id)
AB097052 lung .f 294 to 2647 1 to 2348 M238S P239A S240N A241T N242P ...     2348/2348
(100 %)
4 diff
(99.9 %id)
D79996   .f 294 to 2647 1 to 2348 M238S P239A S240N A241T N242P ... available from KIAA,   2348/2348
(100 %)
4 diff
(99.9 %id)
BM918745 pooled pancreas and spleen .f 294 to 1174 9 to 900       892/1092
(81 %)
23 diff
(97.9 %id)
BQ219003 leiomyosarcoma, uterus .f 294 to 1111 1 to 827       827/950
(87 %)
10 diff
(99.0 %id)
CX753599 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .f 295 to 1037 1 to 738     Submitted on the opposite strand 738/743
(99 %)
6 diff
(99.2 %id)
BP230646 brain .f 298 to 880 1 to 583       583/583
(100 %)
0 diff
(100 %id)
BQ217342 embryonal carcinoma, cell line, testis .f 298 to 1123 1 to 826       826/892
(92 %)
15 diff
(98.4 %id)
BM470607 leiomyosarcoma, uterus .f 299 to 1112 1 to 818       818/1056
(77 %)
13 diff
(98.8 %id)
CD626083   .f 300 to 921 1 to 622       622/622
(100 %)
0 diff
(100 %id)
BX333381 Neuroblastoma Cot 25-normalized .f 300 to 1362 1 to 1062       1062/1070
(99 %)
9 diff
(99.2 %id)
BX440650 brain, fetal brain .f 300 to 1311 1 to 1010       1010/1010
(100 %)
6 diff
(99.5 %id)
CN307594 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .f 301 to 953 1 to 653       653/653
(100 %)
0 diff
(100 %id)
BQ642605 lymph, lymphoma, cell line .f 301 to 1176 1 to 884       884/884
(100 %)
16 diff
(98.2 %id)
BQ712315 Spleen .f 302 to 1111 1 to 813       813/844
(96 %)
6 diff
(99.3 %id)
DA345860 substantia nigra .f 303 to 884 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DB292670 uterus .f 303 to 909 2 to 608   capped   607/607
(100 %)
0 diff
(100 %id)
BU175451 large cell carcinoma, lung .f 307 to 1195 6 to 900       895/905
(98 %)
16 diff
(98.3 %id)
BQ439362 epithelioid carcinoma, Pancreas .f 307 to 1166 1 to 864       864/864
(100 %)
9 diff
(99.0 %id)
BE293975 muscle, rhabdomyosarcoma .f 313 to 934 1 to 622       622/623
(99 %)
8 diff
(98.8 %id)
BE794077 lung, small cell carcinoma .f 313 to 1022 1 to 714       714/795
(89 %)
8 diff
(99.0 %id)
DR005377 Prostate .f 315 to 976 8 to 669       662/669
(98 %)
0 diff
(100 %id)
DA308317 hippocampus .f 319 to 902 2 to 585   capped   584/584
(100 %)
6 diff
(99.0 %id)
BU161700 eye, retinoblastoma .f 319 to 935 15 to 631       617/637
(96 %)
1 diff
(99.9 %id)
BE742093 adenocarcinoma cell line, ovary .f 327 to 1003 1 to 677       677/677
(100 %)
0 diff
(100 %id)
BU171588 melanotic melanoma, skin .f 329 to 1111 1 to 792       792/837
(94 %)
12 diff
(98.6 %id)
BE727909 melanotic melanoma, skin .f 334 to 1099 1 to 771       771/864
(89 %)
25 diff
(97.2 %id)
TI_59382997   .f 336 to 1194 63 to 936       874/874
(100 %)
25 diff
(97.2 %id)
BI260547 cervical carcinoma cell line, cervix .f 740 to 1588 1 to 851       851/863
(98 %)
18 diff
(98.0 %id)
BM563631 astrocytoma grade IV, cell line, brain .f 775 to 1633 1 to 864       864/1006
(85 %)
9 diff
(99.2 %id)
BQ070938 brain, neuroblastoma, cell line .f 827 to 1772 1 to 951       951/1001
(95 %)
18 diff
(98.3 %id)
BQ071159 brain, neuroblastoma, cell line .f 909 to 1801 1 to 902       902/962
(93 %)
14 diff
(98.6 %id)
BQ889071 melanotic melanoma, cell line, skin .f 918 to 1716 1 to 804       804/806
(99 %)
7 diff
(99.2 %id)
BP252725 Kidney .f 939 to 1518 1 to 580       580/580
(100 %)
0 diff
(100 %id)
CR592890 fetal brain .f 993 to 2637 1 to 1645       1645/1645
(100 %)
0 diff
(100 %id)
AL534738 brain, fetal brain .f 995 to 1957 1 to 953   fully sequenced,   953/953
(100 %)
3 diff
(99.7 %id)
BQ224170 embryonal carcinoma, cell line, testis .f 1120 to 1918 1 to 803       803/805
(99 %)
7 diff
(99.2 %id)
CX762999 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .f 1205 to 1902 1 to 692     Submitted on the opposite strand 692/851
(81 %)
11 diff
(98.8 %id)
AL355695   .f 1246 to 2647 1 to 1401   AAA   1401/1401
(100 %)
1 diff
(100.0 %id)
BQ928309 carcinoma, cell line, Prostate .f 1292 to 2142 1 to 860       860/894
(96 %)
20 diff
(97.8 %id)
BX104078 liver and spleen .f 1367 to 2049 1 to 683       683/694
(98 %)
1 diff
(99.9 %id)
BC006261 Ovary, adenocarcinoma .f 1387 to 2650 1901 to 3164   AAA   1264/3164
(39 %)
6 diff
(99.9 %id)
CN307586 embryonic stem cells, cell lines H1, H7, andH9 .f 1408 to 2006 1 to 599       599/599
(100 %)
0 diff
(100 %id)
BM824151 Ascites, stomach .f 1419 to 2005 1 to 587       587/587
(100 %)
0 diff
(100 %id)
CN307600 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .f 1508 to 2155 1 to 649       649/649
(100 %)
1 diff
(99.9 %id)
BX333380 Neuroblastoma Cot 25-normalized .f 1509 to 2578 1067 to 1       1067/1114
(95 %)
17 diff
(98.5 %id)
BM793805 Ascites, stomach .f 1551 to 2158 1 to 608       608/608
(100 %)
0 diff
(100 %id)
BI091271 cervix .f 1557 to 2277 1 to 719       719/719
(100 %)
3 diff
(99.6 %id)
AL567909 brain, fetal brain .f 1575 to 2628 1053 to 1       1053/1053
(100 %)
10 diff
(99.1 %id)
BM147947 leukopheresis .f 1587 to 2047 464 to 3       462/464
(99 %)
0 diff
(100 %id)
BG740294 skin .f 1670 to 2565 1 to 904       904/905
(99 %)
22 diff
(97.6 %id)
CN307598 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .f 1672 to 2451 1 to 780       780/780
(100 %)
1 diff
(99.9 %id)
AI114728 Liver .f 1736 to 2409 675 to 1       675/678
(99 %)
4 diff
(99.5 %id)
TI_149313576   .f 1762 to 2649 966 to 85   AAA   882/978
(90 %)
15 diff
(98.5 %id)
BX414174 T cells (Jurkat cell line) .f 1788 to 2645 855 to 1       855/867
(98 %)
30 diff
(96.6 %id)
TI_149310189   .f 1815 to 2649 915 to 92   AAA   824/938
(87 %)
16 diff
(98.3 %id)
BX454830 brain, fetal brain .f 1819 to 2646 827 to 1       827/889
(93 %)
17 diff
(98.1 %id)
BG260657 bladder, transitional cell papilloma, cell line .f 1848 to 2581 1 to 728       728/950
(76 %)
14 diff
(98.6 %id)
BI038496 nervous_tumor .f 1892 to 2438 548 to 1       548/548
(100 %)
4 diff
(99.3 %id)
AL534737 brain, fetal brain .f 1927 to 2637 702 to 1   fully sequenced,   702/702
(100 %)
0 diff
(100 %id)
BI038189 nervous_tumor .f 1931 to 2438 508 to 1       508/508
(100 %)
3 diff
(99.5 %id)
BM687930.
matches multiple genes
eye, Retina Foveal and Macular .f 1945 to 2561 1 to 618     also hits gene LOC728533 618/618
(100 %)
5 diff
(99.2 %id)
DR000788 fetal brain .f 2013 to 2641 638 to 9     Submitted on the opposite strand 630/638
(98 %)
0 diff
(100 %id)
BJ992566 hepatoblastoma .f 2075 to 2614 540 to 1       540/540
(100 %)
0 diff
(100 %id)
DB295093 adrenal gland .f 2122 to 2647 525 to 1       525/525
(100 %)
5 diff
(99.1 %id)
BF084704 colon .f 2173 to 2461 291 to 2       290/291
(99 %)
0 diff
(100 %id)
DB329372 Prostate .f 2177 to 2650 495 to 22   AAA   474/474
(100 %)
0 diff
(100 %id)
BF945381 nervous_normal .f 2187 to 2508 338 to 16     Submitted on the opposite strand 323/338
(95 %)
0 diff
(100 %id)
FN140351 breast carcinoma .f 2189 to 2280 92 to 1     Submitted on the opposite strand 92/93
(98 %)
4 diff
(95.7 %id)
AW067846 Bone, Hip .f 2190 to 2627 450 to 11       440/450
(97 %)
0 diff
(100 %id)
T06627   .f 2227 to 2644 427 to 1       427/430
(99 %)
14 diff
(96.8 %id)
BF095696 uterus_tumor .f 2301 to 2645 350 to 7       344/359
(95 %)
0 diff
(100 %id)
AA370123 Prostate .f 2311 to 2628 319 to 1     Submitted on the opposite strand 319/320
(99 %)
5 diff
(98.5 %id)
DV461985 cochlea, ear .f 2335 to 2558 224 to 1     Submitted on the opposite strand 224/225
(99 %)
1 diff
(99.6 %id)
FN166927 breast carcinoma .f 2348 to 2454 111 to 3     Submitted on the opposite strand 109/111
(98 %)
0 diff
(100 %id)
AW799607 uterus .f 2376 to 2598 230 to 11       220/238
(92 %)
0 diff
(100 %id)
AW799634 uterus .f 2376 to 2578 225 to 25       201/245
(82 %)
0 diff
(100 %id)
BG315124   .f 2403 to 2637 236 to 1       236/236
(100 %)
4 diff
(98.4 %id)
BE241973 leukopheresis .f 2417 to 2647 232 to 1       232/232
(100 %)
5 diff
(97.9 %id)
BE246718 leukopheresis .f 2477 to 2647 172 to 2       171/172
(99 %)
0 diff
(100 %id)
EC442145 Prostate .f 2542 to 2646 110 to 4       107/110
(97 %)
0 diff
(100 %id)
DA568046 whole embryo, mainly head .f 2636 to 3297 2 to 664   tiling clone, capped   663/672
(98 %)
5 diff
(99.3 %id)
DB354507 whole embryo, mainly head .f 3848 to 4275 432 to 5   tiling clone,   428/432
(99 %)
0 diff
(100 %id)
BC000430 Lung, small cell carcinoma .g 1 to 2349 1 to 2349 exact tiling clone, available from MGC, AAA   2349/2349
(100 %)
0 diff
(100 %id)
BC004359 Lung, small cell carcinoma .g 1 to 2349 1 to 2349   available from MGC, AAA   2349/2349
(100 %)
0 diff
(100 %id)
NM_014761.2   .g 1 to 2349 1 to 2349 exact RefSeq, AAA   2349/2349
(100 %)
0 diff
(100 %id)
TI_1948076212   .g 61 to 852 136 to 928   fully sequenced,   793/928
(85 %)
11 diff
(98.9 %id)
TI_1948076393   .g 61 to 852 133 to 924   fully sequenced,   792/924
(85 %)
9 diff
(99.1 %id)
TI_1948076751   .g 61 to 1144 131 to 1203   fully sequenced,   1073/1203
(89 %)
55 diff
(95.5 %id)
TI_1948076573.
matches multiple genes
  .g 327 to 1149 940 to 118     also hits gene yorere 823/1133
(72 %)
6 diff
(99.5 %id)
TI_1948076213   .g 791 to 1149 481 to 123   fully sequenced,   359/481
(74 %)
0 diff
(100 %id)
TI_1948076394   .g 791 to 1149 481 to 123   fully sequenced,   359/481
(74 %)
0 diff
(100 %id)
TI_1948076752   .g 791 to 1149 480 to 122   fully sequenced,   359/480
(74 %)
0 diff
(100 %id)
BC000116 Eye, retinoblastoma .h 1 to 2255 1 to 2255 exact tiling clone, available from MGC, AAA   2255/2255
(100 %)
0 diff
(100 %id)
AL573024 placenta, Placenta Cot 25-normalized .h 35 to 924 38 to 924       887/924
(95 %)
28 diff
(97.0 %id)
TI_1948121552   .h 51 to 524 124 to 597   fully sequenced,   474/597
(79 %)
6 diff
(99.0 %id)
TI_1948121691   .h 51 to 440 125 to 514   fully sequenced,   390/514
(75 %)
6 diff
(98.9 %id)
TI_1948121990.
matches multiple genes
  .h 51 to 1067 1130 to 115 L2A S4F F6I A8S R10S ...   also hits gene yorere 1014/1270
(79 %)
36 diff
(97.2 %id)
TI_1948121843.
matches multiple genes
  .h 54 to 1067 1142 to 113     Suspected internal deletion, this clone was ignored, also hits gene yorere 1030/1313
(78 %)
39 diff
(97.1 %id)
CX870162 embryonic stem .h 347 to 1068 1 to 715       715/715
(100 %)
4 diff
(99.5 %id)
TI_1948121692   .h 379 to 1067 805 to 117   fully sequenced,   689/805
(85 %)
5 diff
(99.4 %id)
TI_1948121553   .h 463 to 1067 720 to 116   fully sequenced,   605/720
(84 %)
5 diff
(99.4 %id)
BQ881369 brain, neuroblastoma, cell line .h 493 to 1330 1 to 843       843/879
(95 %)
8 diff
(99.1 %id)
BE730312 melanotic melanoma, skin .h 538 to 1321 3 to 780       778/781
(99 %)
13 diff
(98.4 %id)
BE389722 endometrium, adenocarcinoma cell line, uterus .h 566 to 1092 1 to 532       532/532
(100 %)
5 diff
(99.1 %id)
BE388256 endometrium, adenocarcinoma cell line, uterus .h 566 to 1180 1 to 618       618/621
(99 %)
6 diff
(99.1 %id)
BE388595 endometrium, adenocarcinoma cell line, uterus .h 566 to 1278 1 to 715       715/745
(95 %)
23 diff
(97.0 %id)
BE389046 endometrium, adenocarcinoma cell line, uterus .h 566 to 1039 1 to 475       475/478
(99 %)
2 diff
(99.6 %id)
BE389641 endometrium, adenocarcinoma cell line, uterus .h 567 to 1168 1 to 603       603/603
(100 %)
2 diff
(99.7 %id)
BP296851   .h 654 to 1234 1 to 580       580/580
(100 %)
1 diff
(99.9 %id)
BP195609 brain .h 758 to 1339 1 to 583       583/583
(100 %)
3 diff
(99.5 %id)
AL573009 placenta, Placenta Cot 25-normalized .h 1209 to 2179 987 to 21       967/987
(97 %)
0 diff
(100 %id)
DC395688 testis .i 1 to 527 6 to 533   tiling clone,   533/533
(100 %)
2 diff
(99.7 %id)
BI254546 cervical carcinoma cell line, cervix .i 518 to 1274 1 to 753   tiling clone,   753/753
(100 %)
11 diff
(98.6 %id)
CD243560 testis .i 1117 to 1935 27 to 846   tiling clone,   820/846
(96 %)
11 diff
(98.7 %id)
BM558637 duodenal adenocarcinoma, cell line, small intestine .j 1 to 910 1 to 918 S240M A241P N242S T243A P244N ... tiling clone,   918/1021
(89 %)
11 diff
(99.0 %id)
BQ053192 blood, natural killer cells, cell line .j 248 to 910 1 to 665   tiling clone,   665/869
(76 %)
18 diff
(98.0 %id)
DB286150 uterus .k 1 to 542 4 to 546   tiling clone, capped   545/545
(100 %)
1 diff
(99.9 %id)
BP363258 lung .k 1 to 581 2 to 582       582/582
(100 %)
2 diff
(99.7 %id)
BE798407 lung, small cell carcinoma .k 3 to 653 25 to 673       649/673
(96 %)
7 diff
(99.0 %id)
DB193613 ovary, tumor tissue .k 3 to 576 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
BE794972 lung, small cell carcinoma .k 16 to 824 1 to 803   tiling clone,   803/953
(84 %)
13 diff
(98.7 %id)
BQ718165 sympathetic trunk .k 22 to 930 1 to 917 G223W P224T D225* tiling clone,   917/918
(99 %)
10 diff
(99.0 %id)
DA219164 brain .k 24 to 587 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DB233592 trachea .k 24 to 602 2 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
DB277776 uterus .k 24 to 558 2 to 536   capped   535/535
(100 %)
0 diff
(100 %id)
BG819808 anaplastic oligodendroglioma with 1p/19qloss, brain .k 35 to 653 1 to 619       619/619
(100 %)
0 diff
(100 %id)
DB085130 testis .k 43 to 596 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA986618 synovial membrane tissue from rheumatioidarthritis .l 1 to 553 2 to 554   tiling clone, capped   553/553
(100 %)
2 diff
(99.7 %id)
DA867430 Prostate .l 2 to 525 2 to 525   capped   524/524
(100 %)
1 diff
(99.9 %id)
CR601400 B cells (Ramos cell line) Cot 25-normalized .l 19 to 1143 1 to 1125 exact tiling clone,   1125/1125
(100 %)
0 diff
(100 %id)
BX364250   .l 19 to 1020 1 to 997 E38X E44X D46B A71S P72T ...     997/1051
(94 %)
18 diff
(98.3 %id)
DA745805   .l 22 to 583 2 to 557   capped   556/556
(100 %)
4 diff
(99.3 %id)
AK301918 testis .m 1 to 1245 1 to 1239 M90S P91A S92N A93T N94P ... tiling clone,   1239/1239
(100 %)
4 diff
(99.7 %id)
DB031186 testis .m 2 to 617 2 to 613   capped   612/612
(100 %)
5 diff
(99.2 %id)
N56717.
matches multiple genes
placenta .n 1 to 200 1 to 200   tiling clone, also hits gene AKR1A1 200/200
(100 %)
3 diff
(98.5 %id)
DC325953 caudate nucleus .n 117 to 589 1 to 474   tiling clone,   474/474
(100 %)
2 diff
(99.6 %id)
DB289615 uterus .n 393 to 972 16 to 595   tiling clone, capped   580/594
(97 %)
6 diff
(99.0 %id)
DA552217   .o 1 to 546 2 to 546 I107* tiling clone, capped   545/545
(100 %)
1 diff
(99.9 %id)
DA887683   .p 1 to 547 2 to 548   tiling clone, capped   547/548
(99 %)
4 diff
(99.3 %id)
BP350944   .p 2 to 583 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DB072055 testis .p 3 to 550 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
DA211537 brain .p 16 to 562 2 to 547   capped   546/546
(100 %)
2 diff
(99.7 %id)
DA339417 hippocampus .p 23 to 603 2 to 582   capped   581/581
(100 %)
1 diff
(99.9 %id)
DA249933 brain .p 24 to 613 2 to 591 exact tiling clone, capped   590/590
(100 %)
1 diff
(99.9 %id)
DA687907   .q 1 to 541 2 to 542 exact tiling clone, capped   541/541
(100 %)
2 diff
(99.7 %id)
DB241070 trachea .r-u 1 to 599 2 to 600   tiling clone, capped   599/599
(100 %)
2 diff
(99.7 %id)
DA851966 placenta .r-u 26 to 576 2 to 554   tiling clone, capped   553/553
(100 %)
4 diff
(99.3 %id)
BF969108 adrenal cortex carcinoma, cell line, adrenal gland .r-u 92 to 707 1 to 618 L70S G71A E72R G73A S74P ... tiling clone,   618/927
(66 %)
13 diff
(98.6 %id)
AA584694 pheochromocytoma .r-u 260 to 681 1 to 418   tiling clone, Submitted on the opposite strand 418/418
(100 %)
7 diff
(98.4 %id)
DA271877 caudate nucleus .s 1 to 574 2 to 575 exact tiling clone, capped   574/574
(100 %)
0 diff
(100 %id)
DA827445 pericardium .s 5 to 549 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA318436 hippocampus .s 10 to 569 2 to 561 exact capped   560/560
(100 %)
3 diff
(99.5 %id)
DA318449 hippocampus .s 10 to 564 2 to 557 S4L G5W F6I K7* capped   556/556
(100 %)
4 diff
(99.3 %id)
DA089244 cerebellum .s 12 to 573 2 to 563 exact capped   562/562
(100 %)
2 diff
(99.7 %id)
DA116545 cerebellum .s 12 to 604 2 to 594 exact capped   593/593
(100 %)
1 diff
(99.9 %id)
DA116907 cerebellum .s 12 to 552 2 to 543   capped   542/542
(100 %)
2 diff
(99.7 %id)
DA203344 brain .s 12 to 594 2 to 584 K23R R55C L80Q capped   583/583
(100 %)
5 diff
(99.2 %id)
DA320166 hippocampus .s 12 to 491 2 to 481   capped   480/480
(100 %)
1 diff
(99.8 %id)
DA097064 cerebellum .s 23 to 574 2 to 553 exact capped   552/552
(100 %)
1 diff
(99.9 %id)
DA112647 cerebellum .s 28 to 619 2 to 593 exact capped   592/592
(100 %)
1 diff
(99.9 %id)
BP230068 brain .s 34 to 616 1 to 583 exact     583/583
(100 %)
0 diff
(100 %id)
DA719125   .s 34 to 603 2 to 571 exact capped   570/570
(100 %)
2 diff
(99.7 %id)
DA225948 brain .s 35 to 566 2 to 533 exact capped   532/532
(100 %)
1 diff
(99.9 %id)
DA517958 brain .s 35 to 580 2 to 547 exact capped   546/546
(100 %)
0 diff
(100 %id)
DA775661 brain .s 35 to 610 2 to 577 exact capped   576/576
(100 %)
1 diff
(99.9 %id)
DA102299 cerebellum .s 37 to 611 2 to 578 E31G L32T A33W Q34P K35R ... capped   577/577
(100 %)
3 diff
(99.5 %id)
DA334810 hippocampus .s 37 to 583 2 to 549 E31G L32T A33G Q34P K35E ... capped   548/548
(100 %)
1 diff
(99.9 %id)
DA243301 brain .s 42 to 628 2 to 588 exact tiling clone, capped   587/587
(100 %)
1 diff
(99.9 %id)
DA320755 hippocampus .s 45 to 529 2 to 486   capped   485/485
(100 %)
0 diff
(100 %id)
DA083297 cerebellum .s 54 to 627 2 to 576 D42* capped   575/575
(100 %)
2 diff
(99.7 %id)
DA175630 amygdala .t 1 to 520 2 to 521 exact tiling clone, capped   520/520
(100 %)
0 diff
(100 %id)
BM145174 leukopheresis .u -9 to 305 1 to 314   tiling clone,   314/318
(98 %)
33 diff
(89.7 %id)
DB152480 thymus .u 201 to 802 2 to 597 M90S P91A S92N A93T N94P ... tiling clone, capped   596/596
(100 %)
3 diff
(99.5 %id)
DA390737 thalamus .u 747 to 1328 2 to 583   tiling clone, capped   582/582
(100 %)
0 diff
(100 %id)
CR608887 Placenta Cot 25-normalized .va 1 to 1843 1 to 1843 exact tiling clone,   1843/1843
(100 %)
0 diff
(100 %id)
DB097516 testis .vb 1 to 580 2 to 571   tiling clone, capped   570/580
(98 %)
9 diff
(98.5 %id)
BX496174 Liver .vb 119 to 629 1 to 501 Y37H M102S P103A S104N A105T ... tiling clone,   501/501
(100 %)
9 diff
(98.3 %id)
BX496197 Liver .vb 198 to 603 1 to 396 Y37H M102S P103A S104N A105T ...     396/396
(100 %)
6 diff
(98.5 %id)
CN307577 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .vb 320 to 810 1 to 481   tiling clone,   481/481
(100 %)
5 diff
(99.0 %id)
DB154363 thymus .vb 475 to 1039 2 to 570   tiling clone, capped   569/569
(100 %)
7 diff
(98.8 %id)
AI091323 pooled .vb 771 to 1253 1 to 483   tiling clone, Submitted on the opposite strand 483/483
(100 %)
5 diff
(99.0 %id)
DA667374 esophagus .vb 1109 to 1643 2 to 536   tiling clone, capped   535/535
(100 %)
1 diff
(99.9 %id)
DA653168   .vc 1 to 597 2 to 600   tiling clone, capped   599/599
(100 %)
2 diff
(99.7 %id)
CN287381 embryonic stem cells, cell lines H1, H7, andH9 .vc 24 to 680 1 to 658   tiling clone,   658/658
(100 %)
3 diff
(99.6 %id)
DB243211 stomach, tumor tissue .vc 139 to 680 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DB105578 thymus .vc 154 to 695 2 to 543   capped   542/542
(100 %)
1 diff
(99.9 %id)
DA543727   .vc 269 to 837 2 to 571   capped   570/570
(100 %)
2 diff
(99.7 %id)
DA947565 Spleen .vc 325 to 903 2 to 581   capped   580/580
(100 %)
2 diff
(99.7 %id)
DA208379 brain .vc 328 to 882 2 to 557   capped   556/556
(100 %)
2 diff
(99.7 %id)
CU451946 epidermis .vc 347 to 1081 752 to 19     Submitted on the opposite strand 734/752
(97 %)
0 diff
(100 %id)
DA037624   .vc 425 to 969 2 to 547   capped   546/546
(100 %)
1 diff
(99.9 %id)
DB236292 trachea .vc 461 to 973 2 to 514   capped   513/513
(100 %)
1 diff
(99.9 %id)
DA930688 small intestine .vc 503 to 1038 2 to 539   capped   538/538
(100 %)
2 diff
(99.7 %id)
CX781074 human embryonic stem cells .vc 514 to 1299 1 to 786   tiling clone,   786/791
(99 %)
2 diff
(99.8 %id)
CB105273 Ascites, stomach .vc 542 to 1067 1 to 527       527/527
(100 %)
2 diff
(99.7 %id)
DB181704 liver, tumor tissue .vc 664 to 1224 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
CN307592 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .vc 888 to 1522 1 to 634 exact     634/634
(100 %)
1 diff
(99.9 %id)
BP341030 stomach mucosa .vc 923 to 1504 1 to 582 exact     582/582
(100 %)
0 diff
(100 %id)
BP341440 stomach mucosa .vc 923 to 1500 1 to 578 exact     578/578
(100 %)
0 diff
(100 %id)
EB388219 eye, optic nerve .vc 980 to 1747 1 to 768 exact tiling clone,   768/768
(100 %)
0 diff
(100 %id)
BM544092 ovary (pool of 3) .vc 1045 to 1862 7 to 824 exact tiling clone,   818/1077
(75 %)
18 diff
(98.4 %id)
BI018665 marrow .vc 1069 to 1374 1 to 306       306/306
(100 %)
2 diff
(99.4 %id)
BM090567 Fetal Pancreas (4 Pooled Donors, 18 - 20weeks, Stratagene #738023) .vc 1107 to 1698 11 to 602 exact     592/602
(98 %)
6 diff
(99.1 %id)
R20184 whole brain .vc 1119 to 1479 1 to 372       372/383
(97 %)
19 diff
(95.1 %id)
AA460783   .vc 1223 to 1733 1 to 511 G73D     511/511
(100 %)
1 diff
(99.9 %id)
BE089995 breast .vc 1231 to 1707 1 to 480 T2D L3I M4N L5A I6*     480/480
(100 %)
15 diff
(96.9 %id)
AA186982   .vc 1243 to 1600 1 to 357 P19Q S20A Q21R K22S P23L ...     357/357
(100 %)
3 diff
(99.2 %id)
AA181059   .vc 2084 to 2691 609 to 8   tiling clone,   602/611
(98 %)
0 diff
(100 %id)
DB342865 thymus .vc 2131 to 2689 559 to 1   tiling clone,   559/559
(100 %)
0 diff
(100 %id)
DB347588 liver, tumor tissue .vc 2145 to 2687 545 to 1       545/545
(100 %)
3 diff
(99.5 %id)
CX780990 human embryonic stem cells .vc 3998 to 4319 352 to 31   tiling clone, AAA   322/322
(100 %)
8 diff
(97.6 %id)
NR_024612.1   .vd 1 to 483 1 to 483 exact RefSeq, tiling clone,   483/483
(100 %)
0 diff
(100 %id)
AW450253   .vd 45 to 256 1 to 211     Submitted on the opposite strand 211/211
(100 %)
2 diff
(99.1 %id)
AI927878 Kidney .vd 53 to 483 1 to 431     Submitted on the opposite strand 431/431
(100 %)
3 diff
(99.4 %id)
AI927884 Kidney .vd 53 to 480 1 to 428     Submitted on the opposite strand 428/428
(100 %)
2 diff
(99.6 %id)
AA854783 parathyroid gland, parathyroid tumor .vd 74 to 344 1 to 272     Submitted on the opposite strand 272/274
(99 %)
7 diff
(97.5 %id)
BX956382   .ve 1 to 405 1 to 405 exact tiling clone,   405/405
(100 %)
0 diff
(100 %id)
DB248021 uterus .vf-u 1 to 478 2 to 479   tiling clone, capped   478/478
(100 %)
6 diff
(98.8 %id)
DB106484 thymus .vf-u 111 to 653 2 to 545   tiling clone, capped   544/544
(100 %)
4 diff
(99.3 %id)
AL601185   .vf-u 337 to 738 1 to 403       403/403
(100 %)
18 diff
(95.6 %id)
BQ232820 embryonal carcinoma, cell line, testis .vf-u 600 to 1466 1 to 869   tiling clone,   869/872
(99 %)
11 diff
(98.8 %id)
BQ640230 eye, retina .vf-u 639 to 1274 1 to 638   tiling clone,   638/639
(99 %)
2 diff
(99.7 %id)
AI078163   .vf-u 732 to 1258 1 to 527     Submitted on the opposite strand 527/527
(100 %)
1 diff
(99.9 %id)
AU117011 whole embryo, mainly head .vf-u 752 to 1404 2 to 655   tiling clone, capped   654/656
(99 %)
3 diff
(99.6 %id)
AU143952 whole embryo, mainly head .vf-u 1690 to 2215 527 to 1   tiling clone,   527/529
(99 %)
4 diff
(99.3 %id)
DA573135 whole embryo, mainly body .vg-u 1 to 819 2 to 813   tiling clone, capped   812/851
(95 %)
18 diff
(97.9 %id)
W25057 lung .vg-u 90 to 435 1 to 347       347/347
(100 %)
3 diff
(99.2 %id)
AK025339 colon .vg-u 244 to 1843 1 to 1600 exact tiling clone, available from FLJ, AAA   1600/1600
(100 %)
0 diff
(100 %id)
R77671 placenta .vg-u 570 to 825 1 to 256       256/256
(100 %)
6 diff
(97.7 %id)
N40397 melanocyte .vg-u 642 to 1150 1 to 514       514/516
(99 %)
8 diff
(98.5 %id)
TI_151700946   .vg-u 963 to 1859 969 to 88 exact AAA   882/964
(91 %)
14 diff
(98.6 %id)
TI_57197649   .vg-u 983 to 1740 67 to 824 exact     758/824
(91 %)
11 diff
(98.7 %id)
BI819204 pooled brain, lung, testis .vg-u 984 to 1740 1 to 757 exact     757/757
(100 %)
1 diff
(99.9 %id)
BQ890424 dorsal root ganglia .vg-u 1001 to 1763 1 to 772 exact     772/946
(81 %)
23 diff
(97.6 %id)
BM764443 stomach .vg-u 1062 to 1783 1 to 722 exact     722/722
(100 %)
1 diff
(99.9 %id)
CD368100 Alveolar Macrophage, lung .vg-u 1210 to 1859 668 to 19 exact AAA   650/650
(100 %)
1 diff
(99.9 %id)
AW964937   .vg-u 1224 to 1863 640 to 1 R6K V28L E29K   Submitted on the opposite strand 640/643
(99 %)
7 diff
(99.0 %id)
BQ003164 Chondrosarcoma, Left Pelvis .vg-u 1226 to 1860 652 to 19 G25A AAA   634/634
(100 %)
2 diff
(99.7 %id)
CN386935 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .vg-u 1231 to 1859 640 to 12 exact AAA Submitted on the opposite strand 629/629
(100 %)
0 diff
(100 %id)
AW299653 Kidney .vg-u 1292 to 1858 567 to 1       567/567
(100 %)
0 diff
(100 %id)
BM685908 eye, Retina Foveal and Macular .vg-u 1311 to 1859 1 to 549   AAA   549/549
(100 %)
5 diff
(99.1 %id)
CB052285 leiomyosarcoma, soft tissue .vg-u 1312 to 1736 14 to 438       425/438
(97 %)
6 diff
(98.7 %id)
DB360280 whole embryo, mainly body .vg-u 1313 to 1859 547 to 1       547/547
(100 %)
5 diff
(99.1 %id)
AI631775 Kidney .vg-u 1313 to 1859 547 to 1       547/547
(100 %)
0 diff
(100 %id)
BE551999 pooled germ cell tumors .vg-u 1317 to 1859 543 to 2       542/543
(99 %)
0 diff
(100 %id)
AW138458   .vg-u 1327 to 1859 551 to 18   AAA   534/534
(100 %)
6 diff
(98.9 %id)
AI655610 pooled germ cell tumors .vg-u 1329 to 1859 531 to 1       531/531
(100 %)
0 diff
(100 %id)
AW003205 pooled germ cell tumors .vg-u 1338 to 1859 527 to 5       523/527
(99 %)
0 diff
(100 %id)
TI_157605714   .vg-u 1344 to 1859 606 to 91   AAA   516/516
(100 %)
0 diff
(100 %id)
AI655383 pooled germ cell tumors .vg-u 1355 to 1859 505 to 1       505/505
(100 %)
2 diff
(99.7 %id)
BE502709 carcinoid, lung .vg-u 1372 to 1858 487 to 1       487/487
(100 %)
2 diff
(99.6 %id)
BE218360 carcinoid, lung .vg-u 1373 to 1859 491 to 5       487/491
(99 %)
0 diff
(100 %id)
AA614159   .vg-u 1388 to 1859 484 to 13   AAA   472/472
(100 %)
1 diff
(99.8 %id)
BE670099 carcinoid, lung .vg-u 1400 to 1859 468 to 9       460/468
(98 %)
0 diff
(100 %id)
AI298460 carcinoid, lung .vg-u 1401 to 1859 472 to 13   AAA   460/460
(100 %)
3 diff
(99.4 %id)
AI263047 Kidney .vg-u 1401 to 1859 459 to 1       459/459
(100 %)
2 diff
(99.6 %id)
AI281174 adenocarcinoma, colon .vg-u 1403 to 1859 460 to 4       457/460
(99 %)
0 diff
(100 %id)
AI657045 pooled germ cell tumors .vg-u 1403 to 1859 457 to 1       457/457
(100 %)
0 diff
(100 %id)
BF057691 pooled germ cell tumors .vg-u 1405 to 1859 465 to 11   AAA   455/455
(100 %)
1 diff
(99.8 %id)
N92829 lung .vg-u 1406 to 1859 460 to 1       460/468
(98 %)
11 diff
(97.7 %id)
BM800159 leiomyosarcoma, uterus .vg-u 1410 to 1841 12 to 447       436/1161
(37 %)
6 diff
(99.5 %id)
AI298065 carcinoid, lung .vg-u 1412 to 1858 447 to 1       447/447
(100 %)
0 diff
(100 %id)
AI720164 colon .vg-u 1413 to 1864 452 to 1   tiling clone,   452/452
(100 %)
1 diff
(99.8 %id)
AW195919 pooled .vg-u 1414 to 1858 446 to 1       446/446
(100 %)
7 diff
(98.5 %id)
N26034 melanocyte .vg-u 1427 to 1859 435 to 1       435/442
(98 %)
2 diff
(99.6 %id)
AW237599 Kidney .vg-u 1429 to 1859 438 to 10       429/438
(97 %)
0 diff
(100 %id)
N55678   .vg-u 1437 to 1793 1 to 357       357/357
(100 %)
1 diff
(99.8 %id)
AI700051 pooled germ cell tumors .vg-u 1440 to 1859 422 to 1       422/450
(93 %)
6 diff
(98.7 %id)
AI758183 Kidney .vg-u 1455 to 1859 407 to 1       407/407
(100 %)
2 diff
(99.6 %id)
AI702212 carcinoid, lung .vg-u 1465 to 1859 396 to 1       396/396
(100 %)
2 diff
(99.5 %id)
AI364040 anaplastic oligodendroglioma, brain .vg-u 1478 to 1859 383 to 1       383/383
(100 %)
2 diff
(99.5 %id)
BM725558 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .vg-u 1499 to 1859 1 to 361   AAA   361/361
(100 %)
0 diff
(100 %id)
AA602073   .vg-u 1500 to 1859 373 to 14   AAA   360/360
(100 %)
2 diff
(99.5 %id)
AI338784 lung .vg-u 1514 to 1859 347 to 2       346/347
(99 %)
0 diff
(100 %id)
T32873 brain .vg-u 1540 to 1859 321 to 1       321/321
(100 %)
3 diff
(99.1 %id)
AW451694   .vg-u 1542 to 1859 335 to 18   AAA   318/318
(100 %)
0 diff
(100 %id)
AW197812 pooled .vg-u 1544 to 1858 314 to 1       314/314
(100 %)
2 diff
(99.4 %id)
R77672 placenta .vg-u 1560 to 1843 287 to 1       287/289
(99 %)
9 diff
(96.9 %id)
T23592   .vg-u 1566 to 1859 298 to 4       295/299
(98 %)
0 diff
(100 %id)
AW297056   .vg-u 1569 to 1859 308 to 18   AAA   291/301
(96 %)
0 diff
(100 %id)
AW665784 pooled .vg-u 1634 to 1859 1 to 226     Submitted on the opposite strand 226/232
(97 %)
1 diff
(99.6 %id)
D62825   .vg-u 1640 to 1859 1 to 219       219/219
(100 %)
1 diff
(99.6 %id)
T16346   .vg-u 1661 to 1859 199 to 1       199/199
(100 %)
0 diff
(100 %id)
BC038350 Prostate, adenocarcinoma. .vh-u 1 to 1547 1 to 1547 exact tiling clone, available from MGC, AAA   1547/1547
(100 %)
0 diff
(100 %id)
CN292370 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .vh-u 1163 to 1549 1 to 387   AAA   387/387
(100 %)
4 diff
(99.0 %id)
CB121107 Liver .vh-u 1288 to 1726 1 to 437   tiling clone,   437/437
(100 %)
2 diff
(99.6 %id)
BF356743 head_neck .vi-u 1 to 304 1 to 302   tiling clone,   302/302
(100 %)
7 diff
(97.7 %id)
BE767690 placenta_normal .vi-u 156 to 419 269 to 7   tiling clone,   263/326
(80 %)
7 diff
(97.9 %id)
BE767730 placenta_normal .vi-u 156 to 428 276 to 5       272/333
(81 %)
0 diff
(100 %id)
T06816   .vi-u 340 to 728 390 to 1       390/390
(100 %)
7 diff
(98.3 %id)
DA073487 cerebellum .vi-u 371 to 884 2 to 515   capped   514/514
(100 %)
0 diff
(100 %id)
DA890938 rectum .vi-u 374 to 944 2 to 572   tiling clone, capped   571/571
(100 %)
0 diff
(100 %id)
DA542579 lung .vi-u 435 to 1005 2 to 572   tiling clone, capped   571/571
(100 %)
3 diff
(99.5 %id)
AA995993 carcinoid, lung .vi-u 562 to 769 1 to 208     Submitted on the opposite strand 208/209
(99 %)
1 diff
(99.6 %id)
CV311439 head_neck .vi-u 844 to 950 111 to 5     Submitted on the opposite strand 107/111
(96 %)
0 diff
(100 %id)
DA191569 amygdala .vi-u 985 to 1586 2 to 601 A48P tiling clone, capped   600/600
(100 %)
2 diff
(99.7 %id)
DB158047 thymus .vj 1 to 568 2 to 570   tiling clone, capped   569/569
(100 %)
1 diff
(99.9 %id)
BG323299 Kidney, renal cell adenocarcinoma .vj 526 to 1153 1 to 648 P8T N40Q I41Y H42S P43S ... tiling clone,   648/883
(73 %)
32 diff
(96.4 %id)
BM802657 eye, retinoblastoma .vk 1 to 908 6 to 911 exact tiling clone,   911/1099
(82 %)
26 diff
(97.7 %id)
DA504279 brain .vl 1 to 552 6 to 557 exact tiling clone, capped   556/556
(100 %)
6 diff
(99.0 %id)
DA613671   .vl 2 to 577 2 to 580 R12K V13S N14E L15F R16E ... tiling clone, capped   577/579
(99 %)
4 diff
(99.4 %id)
DA384349 thalamus .vm-u 1 to 576 2 to 580 exact tiling clone, capped   579/579
(100 %)
2 diff
(99.7 %id)
DA378966 thalamus .vn 1 to 563 2 to 565 E31G L32T A33G Q34P K35E ... tiling clone, capped   564/564
(100 %)
2 diff
(99.7 %id)
DA823764 pericardium .vo 1 to 560 2 to 562 L32X A33G Q34P K35E A36S ... tiling clone, capped   561/564
(99 %)
3 diff
(99.5 %id)
AI984970 Kidney .vp 1 to 445 1 to 446 exact tiling clone, Submitted on the opposite strand 446/446
(100 %)
2 diff
(99.6 %id)
BG673770 Nasal biopsy .vp 147 to 285 8 to 146       139/156
(89 %)
6 diff
(96.2 %id)
FN102008 breast carcinoma .vp 338 to 441 1 to 103   tiling clone,   103/103
(100 %)
1 diff
(99.1 %id)
AK024081 whole embryo, mainly head Gene ATXN1LandKIAA0174, variant not shown       available from FLJ, This clone was ignored    
AK295066 brain Gene ATXN1LandKIAA0174, variant not shown         Suspected internal deletion, this clone was ignored    
AK297088 cord Blood Gene ATXN1LandKIAA0174, variant not shown         Suspected internal deletion, this clone was ignored    
AK297336 brain Gene ATXN1LandKIAA0174, variant not shown         Suspected internal deletion, this clone was ignored    
98 other accessions, mainly redundant or of lesser quality, also belong to this gene but are not reported.
? Gene Summary Gene on genome mRNA:.a, .b-u, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r-u, .s, .t, .u, .va, .vb, .vc, .vd, .ve, .vf-u, .vg-u, .vh-u, .vi-u, .vj, .vk, .vl, .vm-u, .vn, .vo, .vp Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI