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Gene KCNS2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
41 supporting clones for gene KCNS2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK293096 uterus .a-u 1 to 1784 2 to 1785 exact tiling clone,   1785/1785
(100 %)
0 diff
(100 %id)
DB288313 uterus .a-u 1 to 526 2 to 528   capped   527/527
(100 %)
1 diff
(99.9 %id)
TI_57197689   .b 1 to 823 24 to 904   tiling clone,   713/904
(78 %)
30 diff
(96.7 %id)
BC034778 Brain, Lung, Testis, adult, pooled whole .b 8 to 3171 1 to 3164 exact tiling clone, available from MGC, AAA   3164/3164
(100 %)
3 diff
(100.0 %id)
BI819243 pooled brain, lung, testis .b 8 to 823 1 to 874       706/874
(80 %)
49 diff
(94.4 %id)
NM_020697.2   .b 8 to 3171 1 to 3164 exact RefSeq, AAA   3164/3164
(100 %)
3 diff
(100.0 %id)
BQ109445 pooled brain, lung, testis .b 11 to 607 1 to 597       597/597
(100 %)
2 diff
(99.7 %id)
TI_57220386   .b 34 to 935 27 to 948       922/956
(96 %)
51 diff
(94.7 %id)
BC027932 Brain, adult, 6 pooled whole brains .b 35 to 2153 1 to 2118 exact available from MGC, AAA   2118/2118
(100 %)
3 diff
(99.9 %id)
BI757430 brain .b 35 to 935 1 to 921       921/929
(99 %)
48 diff
(94.9 %id)
CF593395 Human Placenta, placenta .b 43 to 699 29 to 690       662/797
(83 %)
18 diff
(97.8 %id)
AB032970 brain .b 203 to 5226 1 to 5027 exact tiling clone, available from KIAA,   5027/5027
(100 %)
1 diff
(100.0 %id)
TI_1948132074   .b 356 to 1083 123 to 850       728/1365
(53 %)
12 diff
(99.2 %id)
TI_1948132392   .b 356 to 1329 122 to 1088       967/1353
(71 %)
36 diff
(97.4 %id)
TI_1948132393   .b 356 to 964 242 to 859       618/1264
(48 %)
19 diff
(98.5 %id)
TI_1948132704   .b 356 to 1171 120 to 936       817/1419
(57 %)
62 diff
(95.7 %id)
TI_1948132705   .b 356 to 1077 212 to 940       729/1118
(65 %)
34 diff
(97.0 %id)
TI_1948133014   .b 356 to 1056 121 to 827       707/1462
(48 %)
29 diff
(98.1 %id)
CV029456 mixed .b 358 to 979 1 to 623       623/623
(100 %)
1 diff
(99.9 %id)
TI_1948132394   .b 845 to 1793 1078 to 122       957/1342
(71 %)
0 diff
(100 %id)
TI_1948133015   .b 894 to 1793 1032 to 120       913/1337
(68 %)
0 diff
(100 %id)
TI_1948132706   .b 968 to 1793 956 to 122       835/1349
(61 %)
0 diff
(100 %id)
U69192 whole brain .b 1003 to 3171 1 to 2171   AAA   2171/2171
(100 %)
12 diff
(99.5 %id)
R34920 whole brain .b 1014 to 1182 1 to 169       169/169
(100 %)
0 diff
(100 %id)
R19352 whole brain .b 1040 to 1347 1 to 312       312/312
(100 %)
8 diff
(97.5 %id)
H19264 brain .b 1070 to 1354 1 to 284       284/284
(100 %)
2 diff
(99.3 %id)
TI_1948132076   .b 1115 to 1793 800 to 127       674/1317
(51 %)
0 diff
(100 %id)
TI_1948133016   .b 1185 to 1793 737 to 124       614/1313
(46 %)
0 diff
(100 %id)
TI_1948132395   .b 1230 to 1793 691 to 125       567/1395
(40 %)
0 diff
(100 %id)
TI_1948132707   .b 1307 to 1793 616 to 128       489/1454
(33 %)
0 diff
(100 %id)
BQ188030 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 1609 to 1959 1 to 352       352/354
(99 %)
5 diff
(98.6 %id)
TI_151733278   .b 1610 to 1959 409 to 59       351/1023
(34 %)
0 diff
(100 %id)
DA245892 brain .b 1697 to 2269 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
AI681499 carcinoid, lung .b 1702 to 2153 453 to 2       452/453
(99 %)
0 diff
(100 %id)
AW292826   .b 1955 to 2242 13 to 300     Submitted on the opposite strand 288/310
(92 %)
2 diff
(99.4 %id)
H23650 brain .b 2319 to 2818 1 to 514       514/523
(98 %)
21 diff
(96.0 %id)
DA834222 placenta .b 2479 to 3337 2 to 856   capped   855/862
(99 %)
16 diff
(98.2 %id)
BX116434 whole brain .b 2718 to 3171 468 to 15   AAA   454/454
(100 %)
0 diff
(100 %id)
H19265 brain .b 2779 to 3171 406 to 1       406/452
(89 %)
14 diff
(97.0 %id)
R44628 whole brain .b 2825 to 3171 379 to 20   AAA   360/400
(90 %)
18 diff
(95.5 %id)
Z44391 brain, total brain .b 3862 to 4115 1 to 254       254/254
(100 %)
0 diff
(100 %id)
R15427 whole brain .b 3905 to 4342 1 to 447       447/448
(99 %)
18 diff
(96.0 %id)
AA776703   .b 4163 to 4769 1 to 607   tiling clone, Submitted on the opposite strand 607/610
(99 %)
11 diff
(98.2 %id)
R16167 whole brain .b 4960 to 5346 396 to 8   tiling clone,   389/396
(98 %)
0 diff
(100 %id)
Z40322 brain, total brain .b 5060 to 5338 279 to 1   tiling clone,   279/279
(100 %)
0 diff
(100 %id)
? Gene Summary Gene on genome mRNA:.a-u, .b Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C