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Gene KCNK5TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
111 supporting clones for gene KCNK5 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AI951628 fibrotheoma, ovary .a 1 to 526 526 to 1   tiling clone,   526/526
(100 %)
2 diff
(99.7 %id)
CN265547 embryonic stem cells, cell lines H1, H7, andH9 .a 135 to 447 9 to 321       313/321
(97 %)
6 diff
(98.2 %id)
BF436305 fibrotheoma, ovary .a 169 to 461 293 to 1       293/293
(100 %)
0 diff
(100 %id)
BM146463 leukopheresis .a 189 to 557 1 to 371       371/371
(100 %)
11 diff
(97.1 %id)
BC060793 Placenta, pre-eclamptic .a 190 to 3970 1 to 3781 exact tiling clone, available from MGC, AAA   3781/3781
(100 %)
1 diff
(100.0 %id)
CB994348 placenta, pre-eclamptic placenta .a 190 to 969 28 to 816       789/831
(94 %)
28 diff
(96.7 %id)
CB989280 Human Placenta, placenta .a 190 to 969 28 to 816       789/820
(96 %)
15 diff
(98.2 %id)
CB988064 Human Placenta, placenta .a 190 to 909 28 to 758       731/783
(93 %)
22 diff
(97.2 %id)
CB959607 Human Placenta, placenta .a 190 to 831 28 to 675       648/736
(88 %)
19 diff
(97.5 %id)
CB961481 placenta, pre-eclamptic placenta .a 190 to 890 28 to 731       704/768
(91 %)
10 diff
(98.7 %id)
CF594309 Human Placenta, placenta .a 190 to 852 29 to 699       671/830
(80 %)
13 diff
(98.5 %id)
CF594137 Human Placenta, placenta .a 190 to 950 29 to 794       766/925
(82 %)
16 diff
(98.3 %id)
CF994800 Human Placenta, placenta .a 190 to 855 28 to 700       673/769
(87 %)
17 diff
(97.8 %id)
CF593463 Human Placenta, placenta .a 190 to 932 29 to 780       752/809
(92 %)
24 diff
(97.1 %id)
CF993687 Human Placenta, placenta .a 190 to 920 28 to 761       734/780
(94 %)
11 diff
(98.6 %id)
NM_003740.3   .a 190 to 3971 1 to 3782 exact RefSeq, AAA   3782/3782
(100 %)
0 diff
(100 %id)
BM147446 leukopheresis .a 191 to 550 1 to 360       360/360
(100 %)
2 diff
(99.5 %id)
CB959734 Human Placenta, placenta .a 192 to 675 28 to 516       489/942
(51 %)
17 diff
(98.2 %id)
BP282835 bone marrow .a 192 to 774 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
DR005089 placenta .a 216 to 709 8 to 502       495/502
(98 %)
6 diff
(98.9 %id)
CN265544 embryonic stem cells, cell lines H1, H7, andH9 .a 219 to 856 1 to 638       638/638
(100 %)
2 diff
(99.7 %id)
AI300687 2 pooled tumors (clear cell type), Kidney .a 240 to 526 287 to 1       287/287
(100 %)
0 diff
(100 %id)
AW772313 Kidney .a 240 to 526 287 to 1       287/287
(100 %)
0 diff
(100 %id)
AI299266 2 pooled tumors (clear cell type), Kidney .a 245 to 526 282 to 1       282/282
(100 %)
0 diff
(100 %id)
AA568192 colon, colon tumor RER+ .a 264 to 461 196 to 1       196/196
(100 %)
8 diff
(96.0 %id)
CN265546 embryonic stem cells, cell lines H1, H7, andH9 .a 325 to 474 1 to 150       150/150
(100 %)
0 diff
(100 %id)
CD617433   .a 356 to 642 1 to 287       287/287
(100 %)
0 diff
(100 %id)
CD617435   .a 356 to 642 1 to 286       286/286
(100 %)
1 diff
(99.7 %id)
EU978936 brain .a 404 to 2269 1 to 1866 exact     1866/1866
(100 %)
0 diff
(100 %id)
AK314298 trachea .a 457 to 2053 1 to 1597 V423A     1597/1597
(100 %)
2 diff
(99.9 %id)
DB217538 trachea .a 458 to 966 2 to 511   capped   510/510
(100 %)
1 diff
(99.9 %id)
DA595756 lung .a 463 to 1027 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA755212   .a 464 to 985 2 to 527   capped   526/526
(100 %)
6 diff
(98.9 %id)
BC069573 PCR rescued clones .a 483 to 2206 1 to 1724 exact available from MGC,   1724/1724
(100 %)
1 diff
(100.0 %id)
CN265545 embryonic stem cells, cell lines H1, H7, andH9 .a 520 to 1223 1 to 704       704/704
(100 %)
0 diff
(100 %id)
CB045997 2 pooled tumors (clear cell type), Kidney .a 532 to 1018 1 to 487     Submitted on the opposite strand 487/487
(100 %)
8 diff
(98.4 %id)
AI678413 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 536 to 875 1 to 340     Submitted on the opposite strand 340/340
(100 %)
2 diff
(99.5 %id)
BF589029 Kidney .a 537 to 955 1 to 420     Submitted on the opposite strand 420/449
(93 %)
7 diff
(98.5 %id)
BX099305 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 545 to 1002 1 to 458       458/458
(100 %)
0 diff
(100 %id)
BF739947 Kidney .a 598 to 1218 1 to 621     Submitted on the opposite strand 621/622
(99 %)
8 diff
(98.8 %id)
DB228765 trachea .a 631 to 1199 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DB231376 trachea .a 631 to 1216 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
BG900415 cartilage .a 1140 to 1643 595 to 74       522/595
(87 %)
3 diff
(99.5 %id)
CB045998 2 pooled tumors (clear cell type), Kidney .a 1153 to 1631 488 to 10     Submitted on the opposite strand 479/488
(98 %)
0 diff
(100 %id)
DA622479 Kidney .a 1251 to 1785 2 to 536   capped   535/535
(100 %)
0 diff
(100 %id)
DA735008   .a 1325 to 2008 2 to 688   capped   687/691
(99 %)
9 diff
(98.7 %id)
DA666282   .a 1422 to 1979 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
CR985366 T-Lymphocytes .a 1463 to 2243 1 to 784       784/787
(99 %)
4 diff
(99.5 %id)
BX479656   .a 1576 to 2176 1 to 603       603/614
(98 %)
4 diff
(99.4 %id)
AK001897 placenta .a 1593 to 3970 1 to 2378   available from FLJ,   2378/2378
(100 %)
0 diff
(100 %id)
AU136442 placenta .a 1594 to 2350 2 to 769   capped   768/866
(88 %)
17 diff
(98.1 %id)
DA830103 placenta .a 1594 to 2233 2 to 650   capped   649/684
(94 %)
12 diff
(98.3 %id)
AU131236   .a 1733 to 2477 2 to 743   capped   742/763
(97 %)
12 diff
(98.5 %id)
BP356984 mammary gland .a 1840 to 2417 1 to 581       581/583
(99 %)
21 diff
(96.4 %id)
BY997304   .a 1973 to 2621 10 to 658       649/658
(98 %)
6 diff
(99.1 %id)
DA735570   .a 2101 to 2573 18 to 490   capped   473/489
(96 %)
6 diff
(98.8 %id)
BP249276 Kidney .a 2217 to 2800 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
BQ325499 colon_ins .a 2321 to 2585 262 to 2       261/268
(97 %)
0 diff
(100 %id)
BQ325516 colon_ins .a 2321 to 2566 271 to 22       250/277
(90 %)
0 diff
(100 %id)
BQ325522 colon_ins .a 2394 to 2566 188 to 12       177/196
(90 %)
0 diff
(100 %id)
AW860234 colon .a 2553 to 3109 1 to 556       556/556
(100 %)
6 diff
(99.0 %id)
CN265548 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 2583 to 3280 1 to 697       697/697
(100 %)
2 diff
(99.8 %id)
CA406974 adipose .a 2612 to 3110 1 to 497       497/497
(100 %)
8 diff
(98.4 %id)
BQ711168 Spleen .a 2635 to 3538 1 to 913       913/972
(93 %)
30 diff
(97.0 %id)
BG953194 colon .a 2990 to 3345 1 to 357       357/365
(97 %)
5 diff
(98.7 %id)
BE736502 adenocarcinoma, Pancreas .a 3062 to 3771 1 to 702       702/797
(88 %)
14 diff
(98.3 %id)
BE736397 adenocarcinoma, Pancreas .a 3062 to 3809 1 to 746       746/839
(88 %)
35 diff
(95.9 %id)
TI_159715263   .a 3161 to 3971 917 to 119   AAA   799/974
(82 %)
19 diff
(98.1 %id)
BI026194 marrow .a 3188 to 3612 426 to 6       421/426
(98 %)
0 diff
(100 %id)
TI_149300563   .a 3206 to 3970 891 to 129       763/1091
(69 %)
0 diff
(100 %id)
BM831838 stomach .a 3224 to 3547 1 to 321       321/321
(100 %)
5 diff
(98.5 %id)
CB242214 Human Lung Epithelial cells, lung .a 3240 to 3970 749 to 19   AAA   731/731
(100 %)
0 diff
(100 %id)
BU608155 Human Lung Epithelial cells, lung .a 3276 to 3971 714 to 19   AAA   696/705
(98 %)
1 diff
(99.9 %id)
CB306765 Human Lung Epithelial cells, lung .a 3314 to 3971 676 to 19   AAA   658/658
(100 %)
4 diff
(99.4 %id)
CA312793 Human Lung Epithelial cells, lung .a 3365 to 3971 625 to 19   AAA   607/609
(99 %)
0 diff
(100 %id)
CA447074 Chondrosarcoma, Left Pelvis .a 3374 to 3972 1 to 599   AAA Submitted on the opposite strand 599/634
(94 %)
3 diff
(99.6 %id)
GD159485   .a 3377 to 3539 171 to 6     Submitted on the opposite strand 166/171
(97 %)
0 diff
(100 %id)
AU152623   .a 3405 to 3970 567 to 1       567/568
(99 %)
13 diff
(97.8 %id)
AU156725 placenta .a 3416 to 3970 549 to 1       549/574
(95 %)
24 diff
(95.9 %id)
TI_149295223   .a 3416 to 3964 679 to 132   AAA   548/919
(59 %)
47 diff
(94.9 %id)
DB368309   .a 3424 to 3966 542 to 1       542/543
(99 %)
21 diff
(96.2 %id)
AW007116 colon .a 3455 to 3970 521 to 6       516/521
(99 %)
0 diff
(100 %id)
AA643935 breast .a 3459 to 3963 498 to 1       498/498
(100 %)
8 diff
(98.4 %id)
DB367172   .a 3462 to 3971 507 to 1       507/520
(97 %)
12 diff
(97.7 %id)
AI654873 pooled germ cell tumors .a 3465 to 3971 518 to 11   AAA   508/508
(100 %)
3 diff
(99.5 %id)
AA934749 Kidney .a 3475 to 3966 489 to 1       489/489
(100 %)
9 diff
(98.2 %id)
TI_154026509   .a 3483 to 3970 582 to 95   AAA   488/705
(69 %)
0 diff
(100 %id)
CA440229 lung, Metastatic Chondrosarcoma .a 3483 to 3970 506 to 19   AAA   488/495
(98 %)
0 diff
(100 %id)
AI393297 B-cell, chronic lymphotic leukemia .a 3486 to 3964 500 to 22   AAA   479/479
(100 %)
12 diff
(97.5 %id)
BE048547 Kidney .a 3494 to 3970 478 to 2       477/478
(99 %)
0 diff
(100 %id)
R31626 placenta .a 3502 to 3773 1 to 275       275/283
(97 %)
9 diff
(96.9 %id)
DB375125 placenta .a 3508 to 3970 461 to 1       461/566
(81 %)
8 diff
(98.6 %id)
AI470545 Kidney .a 3592 to 3970 381 to 3       379/381
(99 %)
0 diff
(100 %id)
BF510574   .a 3609 to 3971 380 to 18   AAA   363/381
(95 %)
1 diff
(99.8 %id)
BM145375 leukopheresis .a 3613 to 3970 385 to 28       358/385
(92 %)
0 diff
(100 %id)
AW194839 Kidney .a 3630 to 3964 335 to 1       335/335
(100 %)
0 diff
(100 %id)
AI590594 ovary, tumor, 5 pooled (see description) .a 3636 to 4114 479 to 1   tiling clone,   479/479
(100 %)
0 diff
(100 %id)
AI271911 Kidney .a 3661 to 3964 321 to 18   AAA   304/304
(100 %)
5 diff
(98.4 %id)
AW614093 Kidney .a 3667 to 3967 307 to 7       301/307
(98 %)
0 diff
(100 %id)
BF058998 fibrotheoma, ovary .a 3691 to 3970 286 to 7       280/286
(97 %)
0 diff
(100 %id)
BM790518 Ascites, stomach .a 3700 to 4191 1 to 492   tiling clone,   492/492
(100 %)
1 diff
(99.8 %id)
AI673305 pooled germ cell tumors .a 3701 to 3970 282 to 13   AAA   270/270
(100 %)
0 diff
(100 %id)
BP419180 small intestine .a 3708 to 3971 315 to 49   AAA   267/447
(59 %)
7 diff
(98.5 %id)
AA402385 ovarian tumor, ovary .a 3718 to 3967 1 to 247       247/247
(100 %)
2 diff
(99.2 %id)
AI968996 pooled germ cell tumors .a 3757 to 3970 226 to 13       214/226
(94 %)
0 diff
(100 %id)
CA312591 Human Lung Epithelial cells, lung .a 4167 to 4801 654 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 636/636
(100 %)
7 diff
(98.9 %id)
BE326960 Kidney .a 4206 to 4487 297 to 16   AAA   282/282
(100 %)
5 diff
(98.3 %id)
AW243272 Kidney .a 4290 to 4801 512 to 1       512/512
(100 %)
14 diff
(97.3 %id)
AW051731 Kidney .a 4345 to 4801 457 to 1       457/457
(100 %)
1 diff
(99.8 %id)
AW451466   .a 4378 to 4801 441 to 18   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 424/434
(97 %)
1 diff
(99.8 %id)
AI207231 Kidney .a 4437 to 4801 365 to 1   tiling clone,   365/365
(100 %)
1 diff
(99.8 %id)
BP283265 bone marrow .b 1 to 583 1 to 583   tiling clone,   583/583
(100 %)
0 diff
(100 %id)
AA533124 normal prostatic epithelial cells, Prostate .b 347 to 700 1 to 354   tiling clone,   354/360
(98 %)
10 diff
(97.3 %id)
AF084830   Gene KCNK5, variant not shown       AAA Suspected internal deletion, this clone was ignored    
CB996012 placenta, pre-eclamptic placenta Gene KCNK5, variant not shown         Suspected internal deletion, this clone was ignored    
CB997960 placenta, pre-eclamptic placenta Gene KCNK5, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C