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Gene KCNK10TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
66 supporting clones for gene KCNK10 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AF385399   .a 1 to 2380 1 to 2381 V22G H23P V24C I25D T26H ... tiling clone, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 2381/2381
(100 %)
4 diff
(99.9 %id)
NM_138318.2   .a 1 to 7179 1 to 7179 exact RefSeq, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 7179/7179
(100 %)
0 diff
(100 %id)
BC075021 Pooled tissue, PCR rescued clones .a 82 to 1797 1 to 1716   tiling clone, available from MGC,   1716/1716
(100 %)
0 diff
(100 %id)
BC075022 Pooled tissue, PCR rescued clones .a 85 to 1797 1 to 1713   available from MGC,   1713/1713
(100 %)
0 diff
(100 %id)
EU978940 Pancreas .a 95 to 2060 1 to 1966       1966/1966
(100 %)
0 diff
(100 %id)
EU978941 Kidney .a 95 to 2060 1 to 1966       1966/1966
(100 %)
0 diff
(100 %id)
DA319245 hippocampus .b 1 to 565 4 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
AK313499 brain .b 1 to 2082 2 to 2083 exact tiling clone,   2083/2083
(100 %)
2 diff
(100.0 %id)
NM_138317.2   .b 1 to 7507 2 to 7508 exact RefSeq, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 7508/7508
(100 %)
0 diff
(100 %id)
DA487241 brain .b 1 to 579 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA769192 brain .b 24 to 575 2 to 554   capped   553/554
(99 %)
3 diff
(99.5 %id)
AK290518 brain .b 61 to 2402 1 to 2344 F165S N292D R424W     2344/2344
(100 %)
7 diff
(99.8 %id)
DA511041 brain .b 62 to 638 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
AF385400   .b 246 to 2708 1 to 2463 E534G tiling clone, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 2463/2463
(100 %)
1 diff
(100.0 %id)
EU978939 brain .b 327 to 2388 1 to 2062 exact tiling clone,   2062/2062
(100 %)
0 diff
(100 %id)
DA519303 brain .b 370 to 930 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA114263 cerebellum .c 1 to 565 2 to 566   tiling clone, capped   565/565
(100 %)
6 diff
(99.0 %id)
NM_021161.4   .c 29 to 7527 1 to 7499 exact RefSeq, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 7499/7499
(100 %)
0 diff
(100 %id)
DA417199 thalamus .c 30 to 578 2 to 551   capped   550/550
(100 %)
5 diff
(99.1 %id)
AF279890   .c 34 to 2741 21 to 2730 exact tiling clone,   2710/2730
(99 %)
7 diff
(99.8 %id)
EU978938 brain .c 200 to 2408 1 to 2209 exact tiling clone,   2209/2209
(100 %)
3 diff
(99.9 %id)
DR000062 fetal brain .c 225 to 695 1 to 474       474/474
(100 %)
7 diff
(98.6 %id)
AK315263 cerebellum .c 361 to 2102 1 to 1742 A512T     1742/1742
(100 %)
3 diff
(99.9 %id)
DA060837 cerebellum .c 362 to 912 2 to 552   capped   551/551
(100 %)
2 diff
(99.7 %id)
DA179004 amygdala .c 458 to 1035 2 to 580   capped   579/579
(100 %)
2 diff
(99.7 %id)
AX393903   .c 486 to 2099 1 to 1614       1614/1614
(100 %)
0 diff
(100 %id)
CD636361   .c 554 to 653 9 to 108       100/109
(91 %)
6 diff
(94.5 %id)
CD636359   .c 595 to 653 1 to 59       59/60
(98 %)
1 diff
(98.4 %id)
CD636360   .c 595 to 653 59 to 1       59/59
(100 %)
0 diff
(100 %id)
CD636362   .c 595 to 653 59 to 1       59/59
(100 %)
0 diff
(100 %id)
CD636363   .c 595 to 650 1 to 56       56/57
(98 %)
1 diff
(98.3 %id)
CD636364   .c 595 to 650 59 to 4       56/59
(94 %)
0 diff
(100 %id)
BI669964 brain, hypothalamus .c 1314 to 2149 1 to 836       836/960
(87 %)
30 diff
(96.9 %id)
TI_44345269   .c 1317 to 2149 86 to 918       833/1042
(79 %)
33 diff
(96.9 %id)
DB489993 hypothalamus .c 1320 to 1764 1 to 447       447/447
(100 %)
9 diff
(98.0 %id)
BE185995 head_neck .c 1975 to 2344 376 to 5     Submitted on the opposite strand 372/376
(98 %)
0 diff
(100 %id)
BE185888 head_neck .c 2079 to 2350 276 to 3     Submitted on the opposite strand 274/276
(99 %)
0 diff
(100 %id)
BF224089 carcinoid, lung .c 2238 to 2711 8 to 481     Submitted on the opposite strand 474/481
(98 %)
6 diff
(98.8 %id)
BX281300 brain, hypothalamus .c 2308 to 2744 449 to 13     Submitted on the opposite strand 437/449
(97 %)
0 diff
(100 %id)
DB559720 hypothalamus .c 2333 to 2728 1 to 397     Submitted on the opposite strand 397/397
(100 %)
11 diff
(97.3 %id)
BF892943 marrow .c 2505 to 2843 15 to 354   tiling clone,   340/354
(96 %)
6 diff
(98.4 %id)
Z42459 brain, total brain .c 2522 to 2753 1 to 232       232/232
(100 %)
5 diff
(97.9 %id)
BF893057 marrow .c 2554 to 2863 46 to 356   tiling clone,   311/356
(87 %)
6 diff
(98.4 %id)
CR739445 carcinoid, lung .c 3172 to 3665 1 to 494   tiling clone,   494/494
(100 %)
0 diff
(100 %id)
DA792293 brain .c 3443 to 3913 2 to 472   tiling clone, capped   471/471
(100 %)
2 diff
(99.6 %id)
AI693366 carcinoid, lung .c 3675 to 4220 547 to 2   tiling clone,   546/547
(99 %)
0 diff
(100 %id)
AW015693   .c 3742 to 4219 495 to 18   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 478/478
(100 %)
1 diff
(99.8 %id)
AI823437 Kidney .c 3764 to 4223 460 to 1   tiling clone,   460/460
(100 %)
0 diff
(100 %id)
DB512921 testis .c 3797 to 4219 1 to 422     Submitted on the opposite strand 422/422
(100 %)
3 diff
(99.3 %id)
BF593106 Kidney .c 3834 to 4220 389 to 3       387/389
(99 %)
0 diff
(100 %id)
AI299142 carcinoid, lung .c 3844 to 4220 378 to 2       377/378
(99 %)
0 diff
(100 %id)
AI694802 carcinoid, lung .c 3871 to 4219 349 to 1       349/349
(100 %)
2 diff
(99.5 %id)
AI863493 Kidney .c 3936 to 4219 284 to 1       284/284
(100 %)
1 diff
(99.7 %id)
Z38660 brain, total brain .c 3940 to 4223 284 to 1       284/284
(100 %)
1 diff
(99.7 %id)
DA789916 brain .c 4319 to 4880 2 to 563   tiling clone, capped   562/562
(100 %)
2 diff
(99.7 %id)
BQ002138 Chondrosarcoma, Left Pelvis .c 4348 to 4867 538 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 520/520
(100 %)
0 diff
(100 %id)
AK125389 brain .c 4598 to 7527 1 to 2923   tiling clone, available from FLJ,   2923/2923
(100 %)
12 diff
(99.6 %id)
DA775908 brain .c 4599 to 5169 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
T07629   .c 5974 to 6313 337 to 1   tiling clone,   337/337
(100 %)
5 diff
(98.6 %id)
U79244 brain .c 6666 to 7527 1 to 862   tiling clone, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 862/862
(100 %)
0 diff
(100 %id)
T77406 whole brain .c 6667 to 7135 1 to 466       466/467
(99 %)
5 diff
(99.0 %id)
AW206396   .c 6853 to 7340 1 to 488     Submitted on the opposite strand 488/490
(99 %)
5 diff
(99.0 %id)
TI_153990432   .c 6859 to 7346 54 to 541     Submitted on the opposite strand 488/762
(64 %)
3 diff
(99.7 %id)
DB325977 brain .c 6972 to 7527 557 to 1       557/557
(100 %)
5 diff
(99.2 %id)
AW237558 Kidney .c 7045 to 7534 495 to 6   tiling clone,   490/495
(98 %)
0 diff
(100 %id)
BX110278 whole brain .c 7132 to 7527 410 to 15   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 396/396
(100 %)
0 diff
(100 %id)
R38357 whole brain .c 7235 to 7534 311 to 5       307/316
(97 %)
0 diff
(100 %id)
DA769392 brain .d 1 to 569 2 to 570 V67L tiling clone, capped   569/569
(100 %)
1 diff
(99.9 %id)
DA322557 hippocampus .e 1 to 554 2 to 556 exact tiling clone, capped   555/555
(100 %)
2 diff
(99.7 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C