To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene KCNH6TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
53 supporting clones for gene KCNH6 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DB506421 hypothalamus .a 1 to 476 1 to 476   tiling clone,   476/476
(100 %)
2 diff
(99.6 %id)
NM_030779.2   .a 196 to 3616 1 to 3421   RefSeq,   3421/3421
(100 %)
1 diff
(100.0 %id)
AF311913   .a 265 to 3597 1 to 3333   tiling clone, AAA Possibly primed on the genome, locally A rich (18/18 A in genome downstream of last aligned base) 3333/3333
(100 %)
2 diff
(100.0 %id)
TI_1948095097   .a 275 to 1123 128 to 980   tiling clone,   853/1403
(60 %)
16 diff
(98.9 %id)
TI_1948095098   .a 1323 to 1782 587 to 119       475/1350
(35 %)
13 diff
(99.1 %id)
BM561167 eye, retinoblastoma .a 1523 to 2422 38 to 942       905/1076
(84 %)
16 diff
(98.6 %id)
BU170580 eye, retinoblastoma .a 1572 to 2345 1 to 783       780/878
(88 %)
17 diff
(98.1 %id)
AI699256 adenocarcinoma, Pancreas .a 3078 to 3437 357 to 1       357/357
(100 %)
16 diff
(95.6 %id)
AA908657 carcinoid, lung .a 3196 to 3596 400 to 1       400/400
(100 %)
1 diff
(99.8 %id)
AK296498 thalamus .b 1 to 3062 1 to 3062 D452G tiling clone,   3062/3062
(100 %)
3 diff
(100.0 %id)
AK298363 Kidney .c 1 to 2973 1 to 2973 T863M tiling clone,   2973/2973
(100 %)
3 diff
(99.9 %id)
DC362364 Kidney .c 1 to 558 1 to 558       558/558
(100 %)
0 diff
(100 %id)
AK090969 amygdala .c 1505 to 3621 1 to 2118   tiling clone, available from FLJ,   2118/2118
(100 %)
4 diff
(99.9 %id)
AX746709   .c 1505 to 3621 1 to 2118       2118/2118
(100 %)
4 diff
(99.9 %id)
DA163829 amygdala .c 1506 to 2071 2 to 567   capped   566/572
(98 %)
2 diff
(99.7 %id)
H96170 pineal gland .c 1923 to 2203 1 to 279       281/308
(91 %)
17 diff
(94.5 %id)
H96171 pineal gland .c 2797 to 3116 322 to 1       322/322
(100 %)
2 diff
(99.4 %id)
AA825356 carcinoid, lung .c 3082 to 3514 1 to 433   tiling clone, Submitted on the opposite strand 433/433
(100 %)
4 diff
(99.1 %id)
DB577720 hypothalamus .c 3150 to 3625 1 to 476   tiling clone, Submitted on the opposite strand 476/476
(100 %)
2 diff
(99.6 %id)
BE672839 Prostate .c 3255 to 3623 390 to 22   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 369/369
(100 %)
8 diff
(97.9 %id)
BE465143 carcinoid, lung .c 3273 to 3624 355 to 4   tiling clone,   352/355
(99 %)
0 diff
(100 %id)
DB302287 amygdala .c 3365 to 3621 258 to 1       258/258
(100 %)
2 diff
(99.3 %id)
AK091877 Kidney .d 1 to 3017 1 to 3017 T836M F874L tiling clone, available from FLJ,   3017/3017
(100 %)
4 diff
(99.9 %id)
AX747233   .d 1 to 3017 1 to 3017 T836M F874L     3017/3017
(100 %)
4 diff
(99.9 %id)
NM_173092.1   .d 1 to 3017 1 to 3017 exact RefSeq,   3017/3017
(100 %)
1 diff
(100.0 %id)
DA622476 Kidney .d 2 to 525 2 to 525   capped   524/524
(100 %)
1 diff
(99.9 %id)
BF685466 leiomyosarcoma cell line, uterus .d 22 to 766 1 to 743       743/895
(83 %)
15 diff
(98.4 %id)
DA867738 Prostate .d 26 to 554 2 to 530   capped   529/529
(100 %)
1 diff
(99.9 %id)
DA413038 thalamus .d 29 to 592 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DA629589 Kidney .d 29 to 600 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA867334 Prostate .d 29 to 573 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DB130841 thymus .d 29 to 498 2 to 471   capped   470/470
(100 %)
0 diff
(100 %id)
DB136863 thymus .d 29 to 538 2 to 513   capped   512/512
(100 %)
3 diff
(99.5 %id)
DB147394 thymus .d 29 to 582 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
CD632727   .d 46 to 703 1 to 657       657/657
(100 %)
6 diff
(99.1 %id)
CD632729   .d 46 to 709 1 to 661       661/670
(98 %)
14 diff
(98.0 %id)
CD632731   .d 46 to 739 1 to 693       693/693
(100 %)
10 diff
(98.6 %id)
CD632733   .d 46 to 708 1 to 658       658/659
(99 %)
12 diff
(98.2 %id)
CD632735   .d 46 to 701 1 to 659       659/659
(100 %)
7 diff
(99.0 %id)
CD632737   .d 46 to 638 1 to 592       590/592
(99 %)
26 diff
(95.7 %id)
CD632739   .d 46 to 707 1 to 658       658/661
(99 %)
4 diff
(99.4 %id)
DR003753 heart .d 51 to 711 8 to 668       661/668
(98 %)
7 diff
(99.0 %id)
CV026898 mixed .d 81 to 414 1 to 334       334/334
(100 %)
15 diff
(95.6 %id)
TI_1948095256   .d 81 to 905 132 to 961       830/1413
(58 %)
25 diff
(98.3 %id)
TI_1948094802   .d 82 to 856 130 to 901       773/1355
(57 %)
35 diff
(97.5 %id)
DA628998 Kidney .d 371 to 947 2 to 578   capped   577/578
(99 %)
1 diff
(99.9 %id)
CD632730   .d 402 to 1158 768 to 11       758/768
(98 %)
8 diff
(99.0 %id)
CD632732   .d 412 to 1163 784 to 30       755/798
(94 %)
15 diff
(98.2 %id)
CD632734   .d 439 to 1155 724 to 9       716/727
(98 %)
6 diff
(99.2 %id)
CD632738   .d 445 to 1159 717 to 1       717/717
(100 %)
7 diff
(99.1 %id)
CD632728   .d 459 to 1161 711 to 1       711/711
(100 %)
13 diff
(98.2 %id)
CD632740   .d 508 to 1162 683 to 29       655/692
(94 %)
3 diff
(99.6 %id)
CD632736   .d 513 to 1163 661 to 5       657/661
(99 %)
3 diff
(99.6 %id)
BG395842 eye, retinoblastoma .d 684 to 1511 1 to 823   tiling clone,   823/837
(98 %)
25 diff
(97.1 %id)
BM461490 eye, retinoblastoma .d 2417 to 3017 13 to 613   tiling clone,   601/638
(94 %)
2 diff
(99.7 %id)
DB320459 Kidney .d 2491 to 3017 527 to 1       527/536
(98 %)
2 diff
(99.7 %id)
BC006334 Uterus, leiomyosarcoma .e 1 to 1704 1 to 1704   tiling clone, available from MGC, AAA   1704/1704
(100 %)
2 diff
(99.9 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C