To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene KCNE3TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
124 supporting clones for gene KCNE3 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DR006135 Prostate .a 1 to 607 1 to 607 exact tiling clone,   607/607
(100 %)
0 diff
(100 %id)
NM_005472.4   .a 74 to 3143 1 to 3070   RefSeq,   3070/3070
(100 %)
0 diff
(100 %id)
DA902931   .a 75 to 634 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DQ192291   .a 80 to 718 1 to 639       639/639
(100 %)
0 diff
(100 %id)
AU309958 neuroblastoma .a 80 to 658 1 to 579     Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 579/579
(100 %)
1 diff
(99.9 %id)
DB242701 stomach, tumor tissue .a 80 to 651 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DA902528   .a 81 to 651 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
W28418 eye, retina .a 134 to 654 539 to 23       517/564
(91 %)
18 diff
(96.9 %id)
CD709836 normal nasopharynx .a 168 to 444 39 to 314       276/314
(87 %)
6 diff
(98.1 %id)
TI_227715506   .a 220 to 1001 861 to 89   AAA   773/965
(80 %)
21 diff
(97.9 %id)
AA127801 uterus .a 233 to 414 1 to 182       182/182
(100 %)
2 diff
(99.0 %id)
DR004603 placenta .a 234 to 757 8 to 531       524/531
(98 %)
0 diff
(100 %id)
BX483211   .a 237 to 752 1 to 516       516/516
(100 %)
3 diff
(99.5 %id)
BC032235 Blood, adult leukocytes .a 244 to 2871 1 to 2642   tiling clone, available from MGC, AAA   2642/2642
(100 %)
12 diff
(99.6 %id)
BI908963 leukocyte .a 245 to 853 1 to 621   available from MGC,   621/621
(100 %)
12 diff
(98.1 %id)
TI_57235217   .a 245 to 853 35 to 655       621/655
(94 %)
15 diff
(97.8 %id)
BC113743 Blood, adult leukocytes .a 250 to 2915 1 to 2680   tiling clone, AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 2680/2680
(100 %)
14 diff
(99.5 %id)
BX281441 leukocyte .a 250 to 776 1 to 527       527/527
(100 %)
0 diff
(100 %id)
BQ073084 leukocyte .a 251 to 1213 1 to 974       974/1048
(92 %)
36 diff
(96.6 %id)
BC110612 PCR rescued clones .a 305 to 1186 1 to 882       882/882
(100 %)
0 diff
(100 %id)
AF076531   .a 331 to 820 1 to 492       492/492
(100 %)
4 diff
(99.2 %id)
CD366637 Alveolar Macrophage, lung .a 353 to 1001 668 to 19   AAA   650/650
(100 %)
2 diff
(99.7 %id)
AW194853 Kidney .a 380 to 713 336 to 3       334/336
(99 %)
0 diff
(100 %id)
CR457209   .a 421 to 732 1 to 312       312/312
(100 %)
1 diff
(99.7 %id)
BU077623 insulinoma, Pancreas .a 421 to 1001 599 to 19   AAA   581/581
(100 %)
1 diff
(99.9 %id)
DA371013 thalamus .a 434 to 979 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
AA515221 colon .a 445 to 711 267 to 1       267/267
(100 %)
3 diff
(98.9 %id)
TI_154090024   .a 520 to 1001 606 to 121   AAA   486/580
(83 %)
14 diff
(97.6 %id)
CA433885 mixed .a 625 to 1001 395 to 19   AAA   377/377
(100 %)
1 diff
(99.8 %id)
CB266191 adipose .a 629 to 1205 1 to 575       575/575
(100 %)
4 diff
(99.4 %id)
CB267074 adipose .a 633 to 1206 1 to 574       574/574
(100 %)
1 diff
(99.9 %id)
AI221445 pooled .a 643 to 1001 359 to 1       359/359
(100 %)
0 diff
(100 %id)
BF351720 head_neck .a 1033 to 1279 10 to 256       247/256
(96 %)
1 diff
(99.7 %id)
BG992488 head_neck .a 1034 to 1337 7 to 307       301/307
(98 %)
6 diff
(98.1 %id)
BF903326 marrow .a 1036 to 1337 17 to 318       302/318
(94 %)
6 diff
(98.2 %id)
AW081373 colon, moderately differentiated adenocarcinoma .a 1053 to 1586 539 to 4       536/539
(99 %)
0 diff
(100 %id)
DR423822 eye, Pterygium .a 1165 to 1847 1 to 677   tiling clone,   677/677
(100 %)
19 diff
(97.2 %id)
DB190083 lung, tumor tissue .a 1273 to 1724 2 to 454   capped   453/453
(100 %)
4 diff
(99.2 %id)
BM744354 Ascites, stomach .a 1371 to 1800 1 to 425       425/425
(100 %)
11 diff
(97.5 %id)
BM757131 Ascites, stomach .a 1371 to 1796 1 to 421       421/421
(100 %)
7 diff
(98.4 %id)
BM756852 Ascites, stomach .a 1371 to 1825 1 to 451       451/452
(99 %)
11 diff
(97.6 %id)
BM850974 stomach .a 1999 to 2448 1 to 450   tiling clone,   450/450
(100 %)
3 diff
(99.4 %id)
BM851075 stomach .a 2000 to 2423 1 to 425       425/425
(100 %)
4 diff
(99.1 %id)
BF212791 bone marrow, from chronic myelogenous leukemia .a 2046 to 2669 33 to 665   tiling clone,   633/667
(94 %)
32 diff
(95.3 %id)
AI148745 placenta .a 2197 to 2921 731 to 7       725/733
(98 %)
0 diff
(100 %id)
AA316969 lung .a 2274 to 2582 1 to 313       313/314
(99 %)
6 diff
(98.1 %id)
BQ186505 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 2275 to 2525 1 to 248   fully sequenced, Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 248/248
(100 %)
1 diff
(99.6 %id)
TI_151730742   .a 2287 to 3141 930 to 84   tiling clone, AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 847/973
(87 %)
19 diff
(98.1 %id)
BM768555 stomach .a 2299 to 2859 1 to 561       561/561
(100 %)
4 diff
(99.3 %id)
BM856255 stomach .a 2299 to 2724 1 to 426       426/426
(100 %)
4 diff
(99.1 %id)
AI692703 carcinoid, lung .a 2342 to 2890 549 to 1       549/549
(100 %)
2 diff
(99.7 %id)
BE645874 Prostate .a 2355 to 2890 536 to 1       536/536
(100 %)
2 diff
(99.7 %id)
N45648 multiple sclerosis lesions .a 2372 to 2580 1 to 209       209/210
(99 %)
2 diff
(99.1 %id)
AI478536 Kidney .a 2399 to 2872 482 to 9       474/485
(97 %)
0 diff
(100 %id)
AI096933 uterus .a 2403 to 2889 490 to 4       487/490
(99 %)
0 diff
(100 %id)
TI_149290955   .a 2404 to 2883 568 to 89   AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 480/672
(71 %)
2 diff
(99.8 %id)
BU681913 lung .a 2404 to 2883 498 to 19   AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 480/488
(98 %)
2 diff
(99.6 %id)
AU309959 neuroblastoma .a 2415 to 2915 520 to 20   AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 501/501
(100 %)
0 diff
(100 %id)
AI373216 Kidney .a 2419 to 2895 479 to 3       477/479
(99 %)
0 diff
(100 %id)
BF591220 colon, colon tumor, RER+ .a 2422 to 2915 494 to 1       494/494
(100 %)
2 diff
(99.6 %id)
AI679463 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 2447 to 2871 425 to 1       425/425
(100 %)
0 diff
(100 %id)
CA313617 Human Lung Epithelial cells, lung .a 2447 to 2915 487 to 19   AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 469/478
(98 %)
2 diff
(99.6 %id)
AI682318 Prostate .a 2450 to 2920 471 to 1       471/471
(100 %)
2 diff
(99.6 %id)
BF594316 colon, colon tumor, RER+ .a 2453 to 2917 465 to 1       465/465
(100 %)
2 diff
(99.6 %id)
AI991557 Kidney .a 2457 to 2933 478 to 1       478/478
(100 %)
2 diff
(99.6 %id)
BF594580 colon, colon tumor, RER+ .a 2463 to 2879 417 to 1       417/417
(100 %)
2 diff
(99.6 %id)
BX089345 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 2469 to 2871 417 to 15   AAA   403/403
(100 %)
0 diff
(100 %id)
AA553446 Schwannoma tumor .a 2469 to 2915 447 to 1       447/447
(100 %)
2 diff
(99.6 %id)
BM768470 stomach .a 2470 to 2890 1 to 421   AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 421/421
(100 %)
0 diff
(100 %id)
BM817971 stomach .a 2470 to 2888 1 to 418       418/418
(100 %)
1 diff
(99.8 %id)
AI569802 Kidney .a 2473 to 2877 405 to 1       405/405
(100 %)
0 diff
(100 %id)
AA126877 uterus .a 2475 to 2883 410 to 1       410/410
(100 %)
3 diff
(99.3 %id)
AI675027 Prostate .a 2477 to 2915 439 to 1       439/439
(100 %)
2 diff
(99.6 %id)
AI739104 colon, colon tumor, RER+ .a 2478 to 2900 439 to 17       423/439
(96 %)
0 diff
(100 %id)
BQ010803 placenta .a 2479 to 2922 459 to 16   AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 444/444
(100 %)
0 diff
(100 %id)
AI017405 Kidney .a 2483 to 2872 398 to 9       390/398
(97 %)
0 diff
(100 %id)
N27186 placenta .a 2491 to 2920 433 to 1       433/434
(99 %)
3 diff
(99.4 %id)
CA443748 lung, Metastatic Chondrosarcoma .a 2494 to 2935 458 to 17   AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 442/442
(100 %)
3 diff
(99.4 %id)
BM856487 stomach .a 2495 to 2917 1 to 423       423/429
(98 %)
1 diff
(99.8 %id)
CK301015 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 2495 to 3141 665 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 647/647
(100 %)
0 diff
(100 %id)
BQ011369 placenta .a 2496 to 2922 443 to 17   AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 427/427
(100 %)
0 diff
(100 %id)
BQ013893 placenta .a 2506 to 2920 432 to 18   AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 415/415
(100 %)
1 diff
(99.8 %id)
AA680096 liver and spleen .a 2507 to 2890 384 to 1       384/384
(100 %)
3 diff
(99.3 %id)
AA838617 colon, colon tumor .a 2530 to 2917 393 to 6       388/393
(98 %)
0 diff
(100 %id)
AI283984 colon, moderately-differentiated adenocarcinoma .a 2537 to 2915 379 to 1       379/379
(100 %)
0 diff
(100 %id)
BF063500 colon, colon tumor, RER+ .a 2556 to 2917 365 to 4       362/365
(99 %)
0 diff
(100 %id)
BM791046 stomach .a 2609 to 2883 1 to 275   AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 275/275
(100 %)
0 diff
(100 %id)
AI702930 Kidney .a 2610 to 2871 274 to 13   AAA   262/269
(97 %)
2 diff
(99.3 %id)
BM818210 stomach .a 2617 to 2889 1 to 272       272/272
(100 %)
1 diff
(99.7 %id)
AI825327 pooled germ cell tumors .a 2630 to 2915 286 to 1       286/286
(100 %)
2 diff
(99.4 %id)
AI990338 pooled germ cell tumors .a 2634 to 2915 283 to 1       283/283
(100 %)
3 diff
(99.0 %id)
AI982768 pooled germ cell tumors .a 2634 to 2915 292 to 11   AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 282/282
(100 %)
3 diff
(99.0 %id)
AW589787 pooled germ cell tumors .a 2634 to 2905 272 to 1       272/272
(100 %)
2 diff
(99.3 %id)
BQ010542 placenta .a 2640 to 2920 300 to 20       281/300
(93 %)
0 diff
(100 %id)
D20264   .a 2673 to 2917 1 to 245     Submitted on the opposite strand 245/246
(99 %)
1 diff
(99.6 %id)
AI432044 adenocarcinoma, Pancreas .a 2733 to 2872 141 to 2       140/141
(99 %)
0 diff
(100 %id)
AI766739 2 pooled tumors (clear cell type), Kidney .a 2735 to 2917 184 to 2       183/184
(99 %)
0 diff
(100 %id)
AA494359 colon .a 2780 to 3143 364 to 1   tiling clone,   364/364
(100 %)
0 diff
(100 %id)
FN154683 breast carcinoma .a 3060 to 3135 78 to 5     Submitted on the opposite strand 74/79
(93 %)
0 diff
(100 %id)
AA133012 colon, tumor .b 1 to 443 1 to 441   tiling clone,   441/443
(99 %)
4 diff
(99.1 %id)
DA735726   .b 169 to 921 2 to 758 S82P capped   757/775
(97 %)
9 diff
(98.9 %id)
DA279677 corpus callosum .b 173 to 666 2 to 495   tiling clone, capped   494/494
(100 %)
0 diff
(100 %id)
BM149174 leukopheresis .b 207 to 434 1 to 229       229/229
(100 %)
13 diff
(94.4 %id)
AK311876   .b 215 to 765 1 to 551 exact     551/551
(100 %)
0 diff
(100 %id)
DA670276   .b 216 to 780 2 to 566 exact capped   565/565
(100 %)
0 diff
(100 %id)
DA944537 Spleen .b 216 to 767 2 to 553 D40V capped   552/552
(100 %)
1 diff
(99.9 %id)
BE241648 leukopheresis .b 235 to 621 1 to 388       388/388
(100 %)
5 diff
(98.8 %id)
DQ192292   .b 237 to 751 1 to 515       515/515
(100 %)
0 diff
(100 %id)
BP375230 umbilical cord .b 237 to 820 1 to 584 exact tiling clone,   584/584
(100 %)
0 diff
(100 %id)
DA469224   .b 238 to 807 2 to 571 exact capped   570/570
(100 %)
0 diff
(100 %id)
AA132718 colon, tumor .b 661 to 1035 381 to 1   tiling clone,   381/381
(100 %)
8 diff
(98.0 %id)
DB368059   .b 2457 to 2889 435 to 1   tiling clone,   435/440
(98 %)
6 diff
(98.7 %id)
BP226132   .c 1 to 581 1 to 581   tiling clone,   581/581
(100 %)
0 diff
(100 %id)
DB243535 stomach, tumor tissue .c 34 to 607 2 to 575   tiling clone, capped   574/574
(100 %)
1 diff
(99.9 %id)
DA539628 Kidney .d 1 to 584 2 to 585 exact tiling clone, capped   584/584
(100 %)
0 diff
(100 %id)
DA907630   .e 1 to 554 2 to 555 exact tiling clone, capped   554/554
(100 %)
1 diff
(99.9 %id)
DA375903 thalamus .f 1 to 549 2 to 550 exact tiling clone, capped   549/549
(100 %)
0 diff
(100 %id)
AA332683 Embryo, 8 weeks Gene KCNE3, variant not shown         This clone was ignored    
AF302494   Gene KCNE3, variant not shown         This clone was ignored    
AW965449   Gene KCNE3, variant not shown         This clone was ignored    
CR936625 colon carcinoma Gene KCNE3, variant not shown       AAA This clone was ignored    
AI624744 pooled germ cell tumors Gene KCNE3, variant not shown         This clone was ignored    
AI656659 pooled germ cell tumors Gene KCNE3, variant not shown         This clone was ignored    
AI652917 pooled germ cell tumors Gene KCNE3, variant not shown         Suspected internal deletion, this clone was ignored    
AI950220 pooled germ cell tumors Gene KCNE3, variant not shown         This clone was ignored    
AW003841 pooled germ cell tumors Gene KCNE3, variant not shown       AAA Suspected internal deletion, this clone was ignored    
AW294985   Gene KCNE3, variant not shown         This clone was ignored    
BQ706641 Spleen Gene KCNE3, variant not shown         This clone was ignored    
CA307722 Alveolar Macrophage, lung Gene KCNE3, variant not shown       AAA This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC