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Gene KCND2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
66 supporting clones for gene KCND2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DB636537 hippocampus .a 1 to 734 1 to 729   tiling clone,   729/730
(99 %)
8 diff
(99.0 %id)
AK307139 hippocampus .a 185 to 1050 1 to 866       866/866
(100 %)
1 diff
(99.9 %id)
DA315058 hippocampus .a 186 to 754 2 to 579   capped   578/578
(100 %)
10 diff
(98.3 %id)
DA098122 cerebellum .a 188 to 748 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
BP310173 brain .a 191 to 772 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DA188858 amygdala .a 192 to 739 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DA388740 thalamus .a 192 to 779 2 to 590   capped   589/589
(100 %)
1 diff
(99.9 %id)
DA408733 thalamus .a 192 to 720 2 to 531   capped   530/530
(100 %)
2 diff
(99.7 %id)
DA227426 brain .a 209 to 767 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA410219 thalamus .a 211 to 757 2 to 551   capped   550/550
(100 %)
4 diff
(99.3 %id)
AB028967 brain .a 218 to 5550 1 to 5333 exact tiling clone, available from KIAA,   5333/5333
(100 %)
1 diff
(100.0 %id)
NM_012281.2   .a 218 to 5550 1 to 5333 exact RefSeq,   5333/5333
(100 %)
0 diff
(100 %id)
DB167072 kidney, tumor tissue .a 220 to 771 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA295715 hippocampus .a 246 to 823 2 to 582   capped   581/581
(100 %)
3 diff
(99.5 %id)
DN990949 brain, whole brain .a 332 to 1052 30 to 750       721/750
(96 %)
6 diff
(99.2 %id)
DB636285 testis .a 346 to 1013 1 to 668       668/668
(100 %)
7 diff
(99.0 %id)
DB451735 testis .a 346 to 1008 1 to 663       663/663
(100 %)
3 diff
(99.6 %id)
BP228959 brain .a 352 to 933 1 to 582       582/583
(99 %)
3 diff
(99.5 %id)
DB085494 testis .a 352 to 906 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DA418053 thalamus .a 353 to 891 2 to 540   capped   539/539
(100 %)
1 diff
(99.9 %id)
DA793220 brain .a 353 to 864 2 to 513   capped   512/512
(100 %)
0 diff
(100 %id)
DA197298 brain .a 401 to 1163 2 to 763   capped   762/762
(100 %)
1 diff
(99.9 %id)
DA811093 brain .a 421 to 972 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA128997 cerebellum .a 560 to 1132 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
BC110449 PCR rescued clones .a 564 to 3335 1 to 2772 exact     2772/2772
(100 %)
0 diff
(100 %id)
BC110450 PCR rescued clones .a 564 to 3335 1 to 2772 exact     2772/2772
(100 %)
0 diff
(100 %id)
AJ010969   .a 754 to 3104 1 to 2351 exact     2351/2351
(100 %)
0 diff
(100 %id)
DA785079 brain .a 803 to 1385 2 to 586   capped   585/585
(100 %)
2 diff
(99.7 %id)
DA069151 cerebellum .a 965 to 1528 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
AF121104 brain .a 1183 to 2308 1 to 1127       1127/1893
(59 %)
14 diff
(99.3 %id)
BP209965 cerebellum .a 1252 to 1845 1 to 594       594/594
(100 %)
0 diff
(100 %id)
DA111431 cerebellum .a 2016 to 2577 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA397615 thalamus .a 2141 to 2725 2 to 586   capped   585/586
(99 %)
1 diff
(99.9 %id)
DA415393 thalamus .a 2209 to 2852 2 to 646   capped   645/645
(100 %)
1 diff
(99.9 %id)
DA405419 thalamus .a 2294 to 2797 24 to 527   capped   504/526
(95 %)
6 diff
(98.9 %id)
DA413434 thalamus .a 2294 to 2801 12 to 519   capped   508/518
(98 %)
6 diff
(98.9 %id)
DA416715 thalamus .a 2298 to 2748 93 to 543   capped   451/542
(83 %)
6 diff
(98.9 %id)
BF792906 adrenal cortex carcinoma, cell line, adrenal gland .a 2323 to 3046 1 to 723       723/723
(100 %)
11 diff
(98.5 %id)
BG196870   .a 2644 to 3142 1 to 500       500/895
(55 %)
24 diff
(97.4 %id)
BG205115   .a 2648 to 3370 8 to 732       725/891
(81 %)
42 diff
(95.3 %id)
BG194345   .a 2654 to 2870 8 to 225       218/225
(96 %)
6 diff
(97.4 %id)
CN428603 embryonic stem cells, DMSO-treated H9 cellline .a 2706 to 3456 8 to 759       752/759
(99 %)
7 diff
(99.1 %id)
DB303738 brain .a 2868 to 3139 272 to 1       272/272
(100 %)
4 diff
(98.6 %id)
M85950   .a 3290 to 3548 1 to 263       263/311
(84 %)
10 diff
(96.8 %id)
C15006   .a 3304 to 3589 1 to 282       282/282
(100 %)
6 diff
(97.9 %id)
C15176   .a 3304 to 3732 1 to 429       429/429
(100 %)
0 diff
(100 %id)
D54065   .a 3304 to 3500 1 to 200       200/200
(100 %)
4 diff
(98.0 %id)
DA514798 brain .a 3321 to 3879 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
BX118783 ovarian tumor, ovary .a 3351 to 4086 736 to 1     Submitted on the opposite strand 736/736
(100 %)
0 diff
(100 %id)
DA058324 cerebellum .a 3385 to 3938 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
DA276793 corpus callosum .a 3396 to 3969 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
DA059156 cerebellum .a 3415 to 3959 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA532258 brain .a 3525 to 4132 2 to 610   capped   609/609
(100 %)
1 diff
(99.9 %id)
DA058854 cerebellum .a 3646 to 4167 2 to 524   capped   523/523
(100 %)
3 diff
(99.5 %id)
AA427449 ovarian tumor, ovary .a 3787 to 4086 300 to 1     Submitted on the opposite strand 300/300
(100 %)
1 diff
(99.7 %id)
CD654252 Embryonic Stem cells .a 3930 to 4722 13 to 799       787/800
(98 %)
12 diff
(98.5 %id)
DA068881 cerebellum .a 3949 to 4517 2 to 572   capped   571/571
(100 %)
2 diff
(99.7 %id)
DA125095 cerebellum .b 1 to 529 2 to 531 S12L V13S I14N S15Q C16L ... tiling clone, capped   530/530
(100 %)
1 diff
(99.9 %id)
DA806840 brain .c 1 to 571 2 to 572 exact tiling clone, capped   571/571
(100 %)
0 diff
(100 %id)
DA062335 cerebellum .d-u 1 to 561 2 to 562   tiling clone, capped   561/561
(100 %)
0 diff
(100 %id)
DB549908 hippocampus .d-u 849 to 1576 1 to 727   tiling clone, Submitted on the opposite strand 727/727
(100 %)
4 diff
(99.5 %id)
DB508194 testis .d-u 909 to 1574 1 to 665   tiling clone, Submitted on the opposite strand 665/665
(100 %)
1 diff
(99.9 %id)
DB517225 testis .d-u 916 to 1574 1 to 658   tiling clone, Submitted on the opposite strand 658/658
(100 %)
1 diff
(99.9 %id)
T05090   .d-u 1346 to 1580 239 to 4       236/239
(98 %)
0 diff
(100 %id)
FN049654 breast carcinoma .d-u 1461 to 1562 1 to 103       103/103
(100 %)
1 diff
(99.1 %id)
DA779836 brain Gene KCND2, variant not shown       capped This clone was ignored    
DA779894.
matches multiple genes
brain Gene KCND2, variant not shown       capped This clone was ignored, also hits gene katuya    
DA779894.
matches multiple genes
brain Gene katuya, variant not shown       capped This clone was ignored, also hits gene katuya    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI