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Gene KCND1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
42 supporting clones for gene KCND1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BC045659 testis .a 1 to 4717 1 to 4714 exact tiling clone, available from MGC, AAA   4714/4714
(100 %)
8 diff
(99.9 %id)
NM_004979.4   .a 1 to 4720 1 to 4720 exact RefSeq,   4720/4720
(100 %)
0 diff
(100 %id)
DB063277 testis .a 152 to 699 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
AB021865 heart .a 275 to 4297 1 to 4022 S358N V406I tiling clone,   4022/4023
(99 %)
8 diff
(99.9 %id)
AK315092 cerebellum .a 1090 to 3517 1 to 2428 exact tiling clone,   2428/2428
(100 %)
2 diff
(100.0 %id)
DA099812 cerebellum .a 1091 to 1651 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
AF166003 Kidney .a 1524 to 4169 1 to 2646 exact     2646/2646
(100 %)
1 diff
(100.0 %id)
TI_1948157076   .a 1568 to 2571 128 to 1118   fully sequenced,   991/1118
(88 %)
25 diff
(97.8 %id)
TI_1948157387   .a 1568 to 2635 129 to 1185   fully sequenced, AAA   1057/1185
(89 %)
43 diff
(96.4 %id)
AJ005898 brain .a 1574 to 4712 1 to 3139 exact tiling clone,   3139/3139
(100 %)
0 diff
(100 %id)
EL733855 mixed .a 1574 to 2210 1 to 636       636/636
(100 %)
2 diff
(99.7 %id)
TI_1948157222   .a 1574 to 2688 135 to 1239       1105/1372
(80 %)
55 diff
(96.0 %id)
TI_1948207551   .a 1574 to 2572 136 to 1120       985/1326
(74 %)
29 diff
(97.9 %id)
DA108774 cerebellum .a 1893 to 2451 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA923546 small intestine .a 2083 to 2671 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
AL120075 amygdala .a 2191 to 2886 1 to 695       695/695
(100 %)
1 diff
(99.9 %id)
DA879876 Prostate .a 2268 to 2843 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
DA530370 brain .a 2404 to 3007 2 to 605   capped   604/604
(100 %)
0 diff
(100 %id)
TI_1948157077   .a 2541 to 3516 1106 to 127   fully sequenced,   980/1106
(88 %)
34 diff
(97.0 %id)
TI_1948157388   .a 2605 to 3516 1043 to 127   fully sequenced,   917/1043
(87 %)
21 diff
(98.0 %id)
DA912395   .a 2640 to 3205 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
TI_1948157223   .a 2678 to 3516 964 to 126       839/1236
(67 %)
12 diff
(99.1 %id)
TI_1948207552   .a 2694 to 3516 951 to 127       825/1262
(65 %)
12 diff
(99.1 %id)
DA837909 placenta .a 2823 to 3291 2 to 470   capped   469/492
(95 %)
2 diff
(99.6 %id)
R19492 whole brain .a 2982 to 3367 1 to 392       392/399
(98 %)
9 diff
(97.8 %id)
BG181761   .a 3305 to 3985 1 to 677       677/754
(89 %)
30 diff
(96.1 %id)
BP225764   .a 3336 to 3917 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
BG194738   .a 3352 to 3628 1 to 276       276/276
(100 %)
3 diff
(99.0 %id)
T35424 colon .a 3487 to 3733 247 to 1     Submitted on the opposite strand 247/247
(100 %)
0 diff
(100 %id)
Z44902 brain, total brain .a 3529 to 3830 1 to 301       301/301
(100 %)
3 diff
(99.1 %id)
F07466 brain, total brain .a 3530 to 3820 1 to 291       291/291
(100 %)
0 diff
(100 %id)
AW963654   .a 3613 to 3716 104 to 1     Submitted on the opposite strand 104/104
(100 %)
0 diff
(100 %id)
BX280616 whole brain .a 3792 to 4309 1 to 518       518/518
(100 %)
1 diff
(99.9 %id)
AI150825 heart .a 4300 to 4713 418 to 5       414/418
(99 %)
0 diff
(100 %id)
AI694424 carcinoid, lung .a 4325 to 4712 417 to 30   AAA   388/388
(100 %)
20 diff
(94.9 %id)
AI818239 adenocarcinoma, Pancreas .a 4331 to 4397 67 to 1       67/68
(98 %)
2 diff
(97.1 %id)
Z40519 brain, total brain .a 4457 to 4720 265 to 1       265/265
(100 %)
1 diff
(99.7 %id)
F03868 brain, total brain .a 4463 to 4720 258 to 1       258/258
(100 %)
0 diff
(100 %id)
W02729 heart .a 4550 to 4712 165 to 1       165/170
(97 %)
2 diff
(98.9 %id)
AK094431 cerebellum .b 1 to 3305 2 to 3306 exact tiling clone, available from FLJ,   3306/3306
(100 %)
2 diff
(100.0 %id)
DA070789 cerebellum .b 1 to 551 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
DB297506 cerebellum .b 2779 to 3305 527 to 1       527/528
(99 %)
2 diff
(99.7 %id)
DA700522   .c 1 to 518 2 to 519 exact tiling clone, capped   518/518
(100 %)
0 diff
(100 %id)
R61454 whole brain .d 1 to 379 1 to 383 L37V C103X A108X R110A R111X ... tiling clone,   383/439
(87 %)
7 diff
(98.5 %id)
DA078641 cerebellum .e 1 to 586 2 to 587   tiling clone, capped   586/586
(100 %)
1 diff
(99.9 %id)
AI936041 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .f-u 1 to 148 148 to 1 S5L tiling clone,   148/148
(100 %)
3 diff
(98.0 %id)
F05846 brain, total brain Gene KCND1, variant not shown              
Z38762 brain, total brain Gene KCND1, variant not shown              
DA108386 cerebellum Gene KCND1, variant not shown       capped Suspected internal deletion, this clone was ignored    
R16330 whole brain Gene KCND1, variant not shown              
R41406 whole brain Gene KCND1, variant not shown       AAA      
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI